Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

GENE - TERM ANNOTATION REPORT

8 Annotations Found.

An association has been curated linking Agxt and peroxisome in Rattus norvegicus.        

  • The association was inferred from direct assay (IDA)
    		•  
  • The annotation was made from Yokota S and Oda T, Histochemistry. 1985;83(1):81-5.
  • 174 RGD objects have been annotated to peroxisome  (GO:0005777)
  • 25 papers in RGD have been used to annotate Agxt


    • An association has been curated linking Agxt and peroxisome in Rattus norvegicus.        

  • The association was inferred from direct assay (IDA)
    		•  
  • The annotation was made from Oda T, etal., J Biochem (Tokyo). 2000 Apr;127(4):665-71.
  • 1 additional annotations were made from Oda T, etal., J Biochem (Tokyo). 2000 Apr;127(4):665-71.
  • 174 RGD objects have been annotated to peroxisome  (GO:0005777)
  • 25 papers in RGD have been used to annotate Agxt


    • An association has been curated linking Agxt and peroxisome in Rattus norvegicus.        

  • The association was inferred from direct assay (IDA)
    		•  
  • The annotation was made from Kikuchi M, etal., J Biol Chem. 2004 Jan 2;279(1):421-8. Epub 2003 Oct 15.
  • 65 additional annotations were made from Kikuchi M, etal., J Biol Chem. 2004 Jan 2;279(1):421-8. Epub 2003 Oct 15.
  • 174 RGD objects have been annotated to peroxisome  (GO:0005777)
  • 25 papers in RGD have been used to annotate Agxt
  • Qualifier: located_in
  • Curation Notes: PMID:14561759


    • An association has been curated linking Agxt and peroxisome in Rattus norvegicus.        

  • The association was traceable author statement (TAS)
    		•  
  • The annotation was made from Danpure CJ, etal., Eur J Cell Biol. 1994 Aug;64(2):295-313.
  • 1 additional annotations were made from Danpure CJ, etal., Eur J Cell Biol. 1994 Aug;64(2):295-313.
  • 174 RGD objects have been annotated to peroxisome  (GO:0005777)
  • 25 papers in RGD have been used to annotate Agxt
  • Qualifier: located_in
  • Curation Notes: PMID:7813517


    • An association has been curated linking Agxt and peroxisome in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with AGXT (Homo sapiens)
  • 174 RGD objects have been annotated to peroxisome  (GO:0005777)
  • 25 papers in RGD have been used to annotate Agxt
  • Qualifier: located_in
  • Curation Notes: (PMID:10960483), (PMID:12777626), (PMID:1703535), (PMID:3709805), (PMID:7813517), (PMID:9053548)
  • Original References(s): PMID:10960483 PMID:12777626 PMID:1703535 PMID:3709805 PMID:7813517 PMID:9053548


    • An association has been curated linking Agxt and peroxisome in Rattus norvegicus.        

  • The association was inferred from biological aspect of ancestor (IBA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from biological aspect of ancestor with PANTHER:PTN000475663 & Agxt (Rattus norvegicus) & TAIR:locus:2041649 & UniProtKB:P21549
  • 174 RGD objects have been annotated to peroxisome  (GO:0005777)
  • 25 papers in RGD have been used to annotate Agxt
  • Qualifier: is_active_in
  • Curation Notes: GO_REF:0000033
  • Original References(s): GO_REF:0000033


    • An association has been curated linking Agxt and peroxisome in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with UniProtKB-KW:KW-0576
  • 174 RGD objects have been annotated to peroxisome  (GO:0005777)
  • 25 papers in RGD have been used to annotate Agxt
  • Qualifier: located_in
  • Curation Notes: GO_REF:0000043
  • Original References(s): GO_REF:0000043


    • An association has been curated linking Agxt and peroxisome in Rattus norvegicus.        

  • The association was inferred from electronic annotation (IEA)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from electronic annotation with UniProtKB-SubCell:SL-0204
  • 174 RGD objects have been annotated to peroxisome  (GO:0005777)
  • 25 papers in RGD have been used to annotate Agxt
  • Qualifier: located_in
  • Curation Notes: GO_REF:0000044
  • Original References(s): GO_REF:0000044


    • Go Back to source page   Continue to Ontology report