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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:circulatory system trait
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Accession:VT:1000784 term browser browse the term
Definition:Any measurable or observable characteristic of the system that moves extracellular fluids to and from tissues.



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aorta elastic tissue integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vetf1 Vascular elastic tissue fragility QTL 1 IDA RGD PMID:11526202 RGD:619605 NCBI chr 5:2,282,226...5,904,428 JBrowse link
Q Vetf2 Vascular elastic tissue fragility QTL 2 IDA RGD PMID:11526202 RGD:619605 NCBI chr10:41,142,633...86,142,633 JBrowse link
aorta elastin amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Ael1 Aortic elastin QTL 1 IDA RGD PMID:15668357 RGD:1334448 NCBI chr 2:19,076,825...64,076,825 JBrowse link
Q Ael2 Aortic elastin QTL 2 IDA RGD PMID:15668357 RGD:1334448
Q Ael3 Aortic elastin QTL 3 IDA RGD PMID:15668357 RGD:1334448 NCBI chr14:8,267,090...53,267,090 JBrowse link
Q Vetf7 Vascular elastic tissue fragility QTL 7 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 2:81,689,826...221,035,911 JBrowse link
artery integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vetf10 Vascular elastic tissue fragility QTL 10 IDA RGD PMID:17356016 RGD:8662443 NCBI chr10:6,154,182...73,453,136 JBrowse link
Q Vetf3 Vascular elastic tissue fragility QTL 3 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 5:2,282,226...69,540,447 JBrowse link
Q Vetf5 Vascular elastic tissue fragility QTL 5 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 8:28,242,912...99,525,068 JBrowse link
Q Vetf6 Vascular elastic tissue fragility QTL 6 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 9:36,962,359...92,058,970 JBrowse link
artery morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vnigr1 Vascular neointimal growth QTL 1 IDA RGD PMID:16434542 RGD:1578306 NCBI chr 3:149,040,888...168,026,850 JBrowse link
Q Vnigr2 Vascular neointimal growth QTL 2 IDA RGD PMID:16434542 RGD:1578306 NCBI chr 3:130,656,562...169,034,231 JBrowse link
Q Vnigr3 Vascular neointimal growth QTL 3 IDA RGD PMID:16434542 RGD:1578306 NCBI chr 3:130,656,562...169,034,231 JBrowse link
blood vessel smooth muscle cell quantity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Smcn1 Smooth muscle cell number QTL 1 IDA RGD PMID:15741507 RGD:1357419 NCBI chr 2:59,134,147...127,460,910 JBrowse link
heart pumping trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Hrtrt1 Heart rate QTL 1 IDA RGD PMID:14532335 RGD:727992 NCBI chr 1:65,789,093...115,540,829 JBrowse link
Q Hrtrt10 Heart rate QTL 10 IDA RGD PMID:14532335 RGD:727992 NCBI chr 7:664,270...26,029,351 JBrowse link
Q Hrtrt11 Heart rate QTL 11 IDA RGD PMID:11721057 RGD:70849 NCBI chr 1:94,494,440...198,211,706 JBrowse link
Q Hrtrt12 Heart rate QTL 12 IDA RGD PMID:11721057 RGD:70849 NCBI chr 2:218,414,747...240,841,241 JBrowse link
Q Hrtrt13 Heart rate QTL 13 IDA RGD PMID:11721057 RGD:70849 NCBI chr 4:110,275,411...168,266,883 JBrowse link
Q Hrtrt14 Heart rate QTL 14 IDA RGD PMID:11721057 RGD:70849 NCBI chr12:9,318,216...12,829,686 JBrowse link
Q Hrtrt15 Heart rate QTL 15 IDA RGD PMID:11721057 RGD:70849 NCBI chr17:15,330,613...55,836,425 JBrowse link
Q Hrtrt16 Heart rate QTL 16 IDA RGD PMID:11721057 RGD:70849 NCBI chr20:25,209,734...54,435,887 JBrowse link
Q Hrtrt17 Heart rate QTL 17 IDA RGD PMID:9286932 RGD:1358133 NCBI chr 3:10,861,912...89,878,372 JBrowse link
Q Hrtrt18 Heart rate QTL 18 IDA RGD PMID:12209022 RGD:629618 NCBI chr 2:157,142,078...192,625,452 JBrowse link
Q Hrtrt19 Heart rate QTL 19 IDA RGD PMID:11882571 RGD:625381 NCBI chr 2:219,753,301...226,277,316 JBrowse link
Q Hrtrt2 Heart rate QTL 2 IDA RGD PMID:14532335 RGD:727992 NCBI chr 1:11,481,312...75,088,344 JBrowse link
Q Hrtrt20 Heart rate QTL 20 IDA RGD PMID:11882571 RGD:625381 NCBI chr 1:185,356,336...202,902,618 JBrowse link
Q Hrtrt21 Heart rate QTL 21 IDA RGD PMID:11882571 RGD:625381 NCBI chr10:51,772,940...96,772,940 JBrowse link
Q Hrtrt3 Heart rate QTL 3 IDA RGD PMID:14532335 RGD:727992 NCBI chr 2:29,971,593...51,729,300 JBrowse link
Q Hrtrt4 Heart rate QTL 4 IDA RGD PMID:14532335 RGD:727992 NCBI chr 3:43,827,364...90,905,114 JBrowse link
Q Hrtrt5 Heart rate QTL 5 IDA RGD PMID:14532335 RGD:727992 NCBI chr 4:116,179,486...151,161,268 JBrowse link
Q Hrtrt6 Heart rate QTL 6 IDA RGD PMID:14532335 RGD:727992 NCBI chr 4:39,524,264...116,179,656 JBrowse link
Q Hrtrt7 Heart rate QTL 7 IDA RGD PMID:14532335 RGD:727992 NCBI chr 5:47,869,062...90,099,692 JBrowse link
Q Hrtrt8 Heart rate QTL 8 IDA RGD PMID:14532335 RGD:727992 NCBI chr 5:3,844,018...47,869,213 JBrowse link
Q Hrtrt9 Heart rate QTL 9 IDA RGD PMID:14532335 RGD:727992 NCBI chr 7:29,409,683...53,612,950 JBrowse link
Q Stresp24 Stress response QTL 24 IDA RGD PMID:21063213 RGD:4889147 NCBI chr 1:155,866,514...200,866,514 JBrowse link
kidney blood vessel morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rends2 Renal damage susceptibility QTL 2 IDA RGD PMID:12874092 RGD:631854 NCBI chr 1:19,333,571...56,983,283 JBrowse link
Q Rends3 Renal damage susceptibility QTL 3 IDA RGD PMID:12874092 RGD:631854 NCBI chr10:79,813,789...85,160,854 JBrowse link
Q Rends4 Renal damage susceptibility QTL 4 IDA RGD PMID:12874092 RGD:631854 NCBI chr16:1...26,727,669 JBrowse link
kidney plasma flow trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf51 Renal function QTL 51 IDA RGD PMID:10545438 RGD:619628 NCBI chr 1:218,753,816...256,448,513 JBrowse link
renal artery integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vetf4 Vascular elastic tissue fragility QTL 4 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 3:59,242,096...157,323,038 JBrowse link
renal blood flow trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf10 Renal function QTL 10 IDA RGD PMID:14532335 RGD:727992 NCBI chr 3:161,192,952...169,034,231 JBrowse link
Q Rf11 Renal function QTL 11 IDA RGD PMID:14532335 RGD:727992 NCBI chr 3:121,056,165...145,956,249 JBrowse link
Q Rf12 Renal function QTL 12 IDA RGD PMID:14532335 RGD:727992 NCBI chr 3:61,017,749...121,056,321 JBrowse link
Q Rf13 Renal function QTL 13 IDA RGD PMID:14532335 RGD:727992 NCBI chr 4:157,710,145...182,687,754 JBrowse link
Q Rf14 Renal function QTL 14 IDA RGD PMID:14532335 RGD:727992 NCBI chr 6:34,434,137...77,102,317 JBrowse link
Q Rf15 Renal function QTL 15 IDA RGD PMID:14532335 RGD:727992 NCBI chr 6:5,074,497...54,641,141 JBrowse link
Q Rf16 Renal function QTL 16 IDA RGD PMID:14532335 RGD:727992 NCBI chr 6:5,074,497...34,434,305 JBrowse link
Q Rf17 Renal function QTL 17 IDA RGD PMID:14532335 RGD:727992 NCBI chr 8:28,242,912...73,242,912 JBrowse link
Q Rf21 Renal function QTL 21 IDA RGD PMID:14532335 RGD:727992 NCBI chr12:9,318,216...32,103,380 JBrowse link
Q Rf22 Renal function QTL 22 IDA RGD PMID:14532335 RGD:727992 NCBI chr14:42,262,529...95,023,211 JBrowse link
Q Rf23 Renal function QTL 23 IDA RGD PMID:14532335 RGD:727992 NCBI chr15:40,631,268...98,288,169 JBrowse link
Q Rf55 Renal function QTL 55 IDA RGD PMID:16303858 RGD:1579884 NCBI chr 1:218,748,008...257,976,495 JBrowse link
Q Rf56 Renal function QTL 56 IDA RGD PMID:16303858 RGD:1579884 NCBI chr 1:245,907,761...257,976,495 JBrowse link
Q Rf6 Renal function QTL 6 IDA RGD PMID:14532335 RGD:727992 NCBI chr 1:4,162,807...11,481,482 JBrowse link
Q Rf8 Renal function QTL 8 IDA RGD PMID:14532335 RGD:727992 NCBI chr 1:228,581,588...259,647,894 JBrowse link
thoracic aorta cellular protein amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Aocep1 Aortic cell protein QTL 1 IDA RGD PMID:15668357 RGD:1334448 NCBI chr17:40,990,005...85,990,005 JBrowse link
thoracic aorta molecular composition trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vetf8 Vascular elastic tissue fragility QTL 8 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 2:104,559,726...149,559,726 JBrowse link
Q Vetf9 Vascular elastic tissue fragility QTL 9 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 2:157,142,078...226,277,316 JBrowse link

Term paths to the root
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  vertebrate trait 1523
    organ system trait 872
      circulatory system trait 59
        circulatory system development trait + 0
        circulatory system morphology trait + 21
        circulatory system physiology trait + 38
paths to the root