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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:connective tissue trait
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Accession:VT:0100002 term browser browse the term
Definition:Any measurable or observable characteristic related to the physical or functional supporting tissue of the body, a major constituent of which is an extracellular matrix of ground substance, protein fibers, and structural glycoproteins.


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abdominal adipose amount term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw116 Body weight QTL 116 IDA 0.016 4.1 RGD PMID:11071303 RGD:619669 NCBI chr 1:224,054,293...260,122,809 JBrowse link
abdominal fat pad mass term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw117 Body weight QTL 117 IDA 3.58 RGD PMID:10373320 RGD:619678 NCBI chr 3:39,454,637...53,296,578 JBrowse link
Q Bw118 Body weight QTL 118 IDA 3.55 RGD PMID:10373320 RGD:619678 NCBI chr 6:33,309,549...57,730,294 JBrowse link
Q Bw119 Body weight QTL 119 IDA 5.44 RGD PMID:10373320 RGD:619678 NCBI chr 7:27,828,949...27,829,089 JBrowse link
Q Bw121 Body weight QTL 121 IDA 3.56 RGD PMID:10373320 RGD:619678 NCBI chr11:1...21,836,709 JBrowse link
adipocyte free fatty acid secretion trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gluco5 Glucose level QTL 5 IDA 6.4 RGD PMID:9171835 RGD:61078 NCBI chr 4:1...33,250,345 JBrowse link
adipocyte glucose uptake trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gluco11 Glucose level QTL 11 IDA 0.02 2.4 RGD PMID:15752738 RGD:1357415 NCBI chr 4:85,379,421...167,139,601 JBrowse link
Q Gluco12 Glucose level QTL12 IDA 1.6 RGD PMID:15752738 RGD:1357415 NCBI chr 4:5,218,392...29,593,287 JBrowse link
Q Gluco16 Glucose level QTL 16 IDA 1.0E-5 4.3 RGD PMID:9171835 RGD:61078 NCBI chr 4:1...30,372,989 JBrowse link
Q Gluco17 Glucose level QTL 17 IDA 6.3 RGD PMID:9171835 RGD:61078 NCBI chr12:1...16,966,671 JBrowse link
Q Gluco3 Glucose level QTL 3 IDA 4.0E-4 RGD PMID:9171835 RGD:61078
Q Gluco4 Glucose level QTL 4 IDA 2.0E-5 RGD PMID:9171835 RGD:61078 NCBI chr 4:1...34,142,783 JBrowse link
epididymal fat pad mass term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw77 Body weight QTL 77 IDA 0.0025 3.2 RGD PMID:15728334 RGD:1580752 NCBI chr 3:53,184,593...64,655,484 JBrowse link
Q Bw78 Body weight QTL 78 IDA 0.0016 3.2 RGD PMID:15728334 RGD:1580752 NCBI chr 5:119,085,612...128,034,027 JBrowse link
Q Bw79 Body weight QTL 79 IDA 2.0E-4 4.0 RGD PMID:15728334 RGD:1580752 NCBI chr15:28,030,665...82,262,678 JBrowse link
Q Epfw1 Epididymal fat weight QTL 1 IDA 6.0E-4 4.5 RGD PMID:15728334 RGD:1580752 NCBI chr 3:53,184,593...115,665,732 JBrowse link
Q Epfw10 Epididymal fat weight QTL 10 IDA 0.001 9.29 RGD PMID:25003539 RGD:8694157 NCBI chr11:23,280,456...68,280,456 JBrowse link
Q Epfw11 Epididymal fat weight QTL 11 IDA 0.001 6.0 RGD PMID:25003539 RGD:8694157 NCBI chr14:55,624,247...100,624,247 JBrowse link
Q Epfw12 Epididymal fat weight QTL 12 IDA 0.001 17.08 RGD PMID:25003539 RGD:8694157 NCBI chr18:46,640,675...83,828,827 JBrowse link
Q Epfw2 Epididymal fat weight QTL 2 IDA 5.0E-4 3.2 RGD PMID:15728334 RGD:1580752 NCBI chr 8:31,737,729...76,737,729 JBrowse link
Q Epfw3 Epididymal fat weight QTL 3 IDA 2.0E-4 4.1 RGD PMID:15728334 RGD:1580752 NCBI chr15:28,030,665...82,262,678 JBrowse link
Q Epfw4 Epididymal fat weight QTL 4 IDA 0.0058 3.5 RGD PMID:15728334 RGD:1580752 NCBI chr17:9,201,365...23,653,323 JBrowse link
Q Epfw5 Epididymal fat weight QTL 5 IDA 4.4 RGD PMID:24099777 RGD:8552892 NCBI chr 1:193,113,876...238,113,876 JBrowse link
Q Epfw6 Epididymal fat weight QTL 6 IDA 0.001 7.47 RGD PMID:25003539 RGD:8694157 NCBI chr 2:223,389,739...249,053,267 JBrowse link
Q Epfw7 Epididymal fat weight QTL 7 IDA 0.001 20.66 RGD PMID:25003539 RGD:8694157 NCBI chr 5:49,463,600...94,463,600 JBrowse link
Q Epfw8 Epididymal fat weight QTL 8 IDA 0.001 11.78 RGD PMID:25003539 RGD:8694157
Q Epfw9 Epididymal fat weight QTL 9 IDA 0.001 19.24 RGD PMID:25003539 RGD:8694157 NCBI chr10:44,441,699...89,441,699 JBrowse link
femur mineral mass term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd1 Bone mineral density QTL 1 IDA 1.0E-4 12.2 RGD PMID:16180139 RGD:1553896 NCBI chr 1:509,108...86,060,548 JBrowse link
Q Bmd10 Bone mineral density QTL 10 IDA 5.4 RGD PMID:16461031 RGD:1578307
Q Bmd11 Bone mineral density QTL 11 IDA 11.0 RGD PMID:16461031 RGD:1578307 NCBI chr 4:90,850,165...135,850,165 JBrowse link
Q Bmd12 Bone mineral density QTL 12 IDA 3.8 RGD PMID:16461031 RGD:1578307 NCBI chr 4:135,699,135...180,699,135 JBrowse link
Q Bmd13 Bone mineral density QTL 13 IDA 4.9 RGD PMID:16461031 RGD:1578307 NCBI chr 5:103,689,353...148,689,353 JBrowse link
Q Bmd14 Bone mineral density QTL 14 IDA 3.8 RGD PMID:16461031 RGD:1578307 NCBI chr 6:11,735,669...72,593,685 JBrowse link
Q Bmd15 Bone mineral density QTL 15 IDA 5.2 RGD PMID:16461031 RGD:1578307 NCBI chr 7:9,866,467...60,460,686 JBrowse link
Q Bmd16 Bone mineral density QTL 16 IDA 6.2 RGD PMID:16461031 RGD:1578307 NCBI chr10:96,703,043...107,057,807 JBrowse link
Q Bmd17 Bone mineral density QTL 17 IDA 4.0 RGD PMID:16461031 RGD:1578307 NCBI chr15:22,806,240...98,288,169 JBrowse link
Q Bmd18 Bone mineral density QTL 18 IDA 5.2 RGD PMID:16461031 RGD:1578307 NCBI chr15:22,806,240...98,288,169 JBrowse link
Q Bmd19 Bone mineral density QTL 19 IDA 1.0E-4 10.7 RGD PMID:18282130 RGD:2293456 NCBI chr 2:43,162,366...111,362,592 JBrowse link
Q Bmd20 Bone mineral density QTL 20 IDA 2.0E-4 4.3 RGD PMID:18282130 RGD:2293456 NCBI chr 6:5,074,497...19,988,050 JBrowse link
Q Bmd21 Bone mineral density QTL 21 IDA 3.0E-4 4.2 RGD PMID:18282130 RGD:2293456 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bmd22 Bone mineral density QTL 22 IDA 1.0E-4 4.9 RGD PMID:18282130 RGD:2293456 NCBI chr10:49,444,551...81,709,989 JBrowse link
Q Bmd23 Bone mineral density QTL 23 IDA 1.0E-4 7.3 RGD PMID:18282130 RGD:2293456 NCBI chr18:51,464,733...63,636,873 JBrowse link
Q Bmd24 Bone mineral density QTL 24 IDA 1.0E-4 8.9 RGD PMID:18282130 RGD:2293456 NCBI chr 2:43,162,366...111,362,592 JBrowse link
Q Bmd25 Bone mineral density QTL 25 IDA 1.0E-4 7.1 RGD PMID:18282130 RGD:2293456 NCBI chr10:49,444,551...81,709,989 JBrowse link
Q Bmd26 Bone mineral density QTL 26 IDA 2.0E-4 4.4 RGD PMID:18282130 RGD:2293456 NCBI chr12:15,872,653...32,974,238 JBrowse link
Q Bmd27 Bone mineral density QTL 27 IDA 1.0E-4 6.6 RGD PMID:18282130 RGD:2293456 NCBI chr 1:224,054,293...243,747,962 JBrowse link
Q Bmd28 Bone mineral density QTL 28 IDA 1.0E-4 5.1 RGD PMID:18282130 RGD:2293456 NCBI chr17:4,354,487...27,028,127 JBrowse link
Q Bmd3 Bone mineral density QTL 3 IDA 1.0E-4 7.9 RGD PMID:16180139 RGD:1553896 NCBI chr 8:40,952,565...123,900,184 JBrowse link
Q Bmd30 Bone mineral density QTL 30 IDA 1.0E-4 3.5 RGD PMID:18282130 RGD:2293456 NCBI chr10:49,444,551...81,709,989 JBrowse link
Q Bmd40 Bone mineral density QTL 40 IDA 1.0E-4 15.4 RGD PMID:18707222 RGD:2300109 NCBI chr 1:201,554,356...246,554,356 JBrowse link
Q Bmd41 Bone mineral density QTL 41 IDA 1.0E-4 8.9 RGD PMID:18707222 RGD:2300109 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bmd43 Bone mineral density QTL 43 IDA 1.0E-4 8.4 RGD PMID:18707222 RGD:2300109 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bmd46 Bone mineral density QTL 46 IDA 1.0E-4 8.4 RGD PMID:18707222 RGD:2300109 NCBI chr 2:88,862,519...133,862,519 JBrowse link
Q Bmd47 Bone mineral density QTL 47 IDA 1.0E-4 6.6 RGD PMID:18707222 RGD:2300109 NCBI chr 2:20,662,448...65,662,448 JBrowse link
Q Bmd48 Bone mineral density QTL 48 IDA 1.0E-4 5.8 RGD PMID:18707222 RGD:2300109 NCBI chr 2:179,335,906...224,335,906 JBrowse link
Q Bmd50 Bone mineral density QTL 50 IDA 1.0E-4 5.9 RGD PMID:18707222 RGD:2300109 NCBI chr 4:60,928,534...105,928,534 JBrowse link
Q Bmd51 Bone mineral density QTL 51 IDA 1.0E-4 11.7 RGD PMID:18707222 RGD:2300109 NCBI chr 6:1...27,574,569 JBrowse link
Q Bmd52 Bone mineral density QTL 52 IDA 1.0E-4 11.2 RGD PMID:18707222 RGD:2300109 NCBI chr 6:1...27,574,569 JBrowse link
Q Bmd54 Bone mineral density QTL 54 IDA 1.0E-4 5.3 RGD PMID:18707222 RGD:2300109 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bmd55 Bone mineral density QTL 55 IDA 1.0E-4 5.7 RGD PMID:18707222 RGD:2300109 NCBI chr 8:76,468,691...121,468,691 JBrowse link
Q Bmd56 Bone mineral density QTL 56 IDA 5.4 RGD PMID:18707222 RGD:2300109 NCBI chr 8:95,718,998...123,900,184 JBrowse link
Q Bmd57 Bone mineral density QTL 57 IDA 1.0E-4 9.8 RGD PMID:18707222 RGD:2300109 NCBI chr10:69,738,412...107,211,142 JBrowse link
Q Bmd6 Bone mineral density QTL 6 IDA 12.2 RGD PMID:16461031 RGD:1578307 NCBI chr 1:509,108...43,284,926 JBrowse link
Q Bmd60 Bone mineral density QTL 60 IDA 1.0E-4 5.7 RGD PMID:18707222 RGD:2300109 NCBI chr14:1...26,541,967 JBrowse link
Q Bmd61 Bone mineral density QTL 61 IDA 1.0E-4 5.3 RGD PMID:18707222 RGD:2300109 NCBI chr14:1...26,541,967 JBrowse link
Q Bmd63 Bone mineral density QTL 63 IDA 1.0E-4 5.9 RGD PMID:18707222 RGD:2300109 NCBI chr15:11,111,142...56,111,142 JBrowse link
Q Bmd65 Bone mineral density QTL 65 IDA 1.0E-4 19.7 RGD PMID:18707222 RGD:2300109 NCBI chr18:28,964,853...73,964,853 JBrowse link
Q Bmd67 Bone mineral density QTL 67 IDA 1.0E-4 4.8 RGD PMID:18707222 RGD:2300109 NCBI chr18:1...34,291,613 JBrowse link
Q Bmd68 Bone mineral density QTL 68 IDA 1.0E-4 6.4 RGD PMID:18707222 RGD:2300109 NCBI chr20:25,106,722...54,435,887 JBrowse link
Q Bmd7 Bone mineral density QTL 7 IDA 14.2 RGD PMID:16461031 RGD:1578307 NCBI chr 1:509,108...43,284,926 JBrowse link
Q Bmd8 Bone mineral density QTL 8 IDA 4.9 RGD PMID:16461031 RGD:1578307 NCBI chr 1:49,393,172...94,393,172 JBrowse link
Q Bmd88 Bone mineral density QTL 88 IDA 4.0 RGD PMID:18282130 RGD:2293456 NCBI chr 9:23,754,024...58,157,242 JBrowse link
Q Bmd9 Bone mineral QTL density 9 IDA 5.0 RGD PMID:16461031 RGD:1578307 NCBI chr 2:11,852,062...49,003,364 JBrowse link
femur morphology trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss10 Bone structure and strength QTL 10 IDA 4.0 RGD PMID:16461031 RGD:1578307 NCBI chr 1:49,393,172...159,356,837 JBrowse link
Q Bss11 Bone structure and strength QTL 11 IDA 4.7 RGD PMID:16461031 RGD:1578307 NCBI chr 2:114,837,527...211,674,221 JBrowse link
Q Bss111 Bone structure and strength QTL 111 IDA 6.4 RGD PMID:16059631 RGD:1549683 NCBI chr 2:211,744,537...249,053,267 JBrowse link
Q Bss112 Bone structure and strength QTL 112 IDA 7.0 RGD PMID:16059631 RGD:1549683 NCBI chr 5:106,906,205...151,906,205 JBrowse link
Q Bss113 Bone structure and strength QTL 113 IDA 1.7E-10 9.75 RGD PMID:26297441 RGD:11528619 NCBI chr 3:16,490,648...19,241,681 JBrowse link
Q Bss115 Bone structure and strength QTL 115 IDA 2.7E-7 6.56 RGD PMID:26297441 RGD:11528619 NCBI chr 8:80,802,332...81,664,473 JBrowse link
Q Bss116 Bone structure and strength QTL 116 IDA 3.8E-7 6.46 RGD PMID:26297441 RGD:11528619 NCBI chr10:44,179,770...45,632,973 JBrowse link
Q Bss12 Bone structure and strength QTL 12 IDA 8.9 RGD PMID:16461031 RGD:1578307 NCBI chr 4:60,220,938...105,220,938 JBrowse link
Q Bss120 Bone structure and strength QTL 120 IDA 2.7E-9 8.55 RGD PMID:26297441 RGD:11528619 NCBI chr17:77,830,064...78,603,788 JBrowse link
Q Bss121 Bone structure and strength QTL 121 IDA 1.9E-7 6.72 RGD PMID:26297441 RGD:11528619 NCBI chr20:33,221,477...35,747,124 JBrowse link
Q Bss14 Bone structure and strength QTL 14 IDA 16.4 RGD PMID:16461031 RGD:1578307 NCBI chr 4:87,327,165...132,327,165 JBrowse link
Q Bss16 Bone structure and strength QTL 16 IDA 4.4 RGD PMID:16461031 RGD:1578307 NCBI chr 6:11,735,669...72,593,685 JBrowse link
Q Bss17 Bone structure and strength QTL 17 IDA 3.8 RGD PMID:16461031 RGD:1578307 NCBI chr 9:3,368,652...13,533,896 JBrowse link
Q Bss19 Bone structure and strength QTL 19 IDA 4.3 RGD PMID:16461031 RGD:1578307 NCBI chr15:22,806,240...98,288,169 JBrowse link
Q Bss20 Bone structure and strength QTL 20 IDA 3.7 RGD PMID:16461031 RGD:1578307 NCBI chr18:11,791,518...83,218,561 JBrowse link
Q Bss21 Bone structure and strength QTL 21 IDA 3.5 RGD PMID:16461031 RGD:1578307 NCBI chr18:11,791,518...83,218,561 JBrowse link
Q Bss22 Bone structure and strength QTL 22 IDA 1.0E-4 33.52 RGD PMID:18158281 RGD:2293455 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bss23 Bone structure and strength QTL 23 IDA 1.0E-4 5.18 RGD PMID:18158281 RGD:2293455 NCBI chr 6:1...42,487,980 JBrowse link
Q Bss24 Bone structure and strength QTL 24 IDA 1.0E-4 6.71 RGD PMID:18158281 RGD:2293455 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bss25 Bone structure and strength QTL 25 IDA 1.0E-4 10.96 RGD PMID:18158281 RGD:2293455 NCBI chr10:69,738,412...107,211,142 JBrowse link
Q Bss26 Bone structure and strength QTL 26 IDA 1.0E-4 4.6 RGD PMID:18158281 RGD:2293455 NCBI chr13:65,103,704...106,807,694 JBrowse link
Q Bss27 Bone structure and strength QTL 27 IDA 1.0E-4 18.63 RGD PMID:18158281 RGD:2293455 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bss28 Bone structure and strength QTL 28 IDA 1.0E-4 6.79 RGD PMID:18158281 RGD:2293455 NCBI chr 6:1...42,487,980 JBrowse link
Q Bss29 Bone structure and strength QTL 29 IDA 1.0E-4 5.31 RGD PMID:18158281 RGD:2293455 NCBI chr15:11,111,142...56,111,142 JBrowse link
Q Bss3 Bone structure and strength QTL 3 IDA 11.0 RGD PMID:16059631 RGD:1549683 NCBI chr 4:109,827,074...154,827,074 JBrowse link
Q Bss9 Bone structure and strength QTL 9 IDA 6.3 RGD PMID:16461031 RGD:1578307 NCBI chr 1:509,108...43,284,926 JBrowse link
femur size trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd29 Bone mineral density QTL 29 IDA 1.0E-4 5.4 RGD PMID:18282130 RGD:2293456 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bmd31 Bone mineral density QTL 31 IDA 1.0E-4 4.5 RGD PMID:18282130 RGD:2293456 NCBI chr17:4,354,487...27,028,127 JBrowse link
Q Bmd38 Bone mineral density QTL 38 IDA 4.4 RGD PMID:18282130 RGD:2293456 NCBI chr 5:8,948,228...53,948,228 JBrowse link
Q Bmd90 Bone mineral density QTL 90 IDA 5.2 RGD PMID:18282130 RGD:2293456 NCBI chr10:49,444,551...81,709,989 JBrowse link
Q Bmd91 Bone mineral density QTL 91 IDA 3.5 RGD PMID:18282130 RGD:2293456 NCBI chr 9:23,754,144...83,851,531 JBrowse link
femur strength trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd32 Bone mineral density QTL 32 IDA 1.0E-4 5.1 RGD PMID:18282130 RGD:2293456 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bmd33 Bone mineral density QTL 33 IDA 1.0E-4 4.5 RGD PMID:18282130 RGD:2293456 NCBI chr10:49,444,551...81,709,989 JBrowse link
Q Bmd34 Bone mineral density QTL 34 IDA 1.0E-4 8.3 RGD PMID:18282130 RGD:2293456 NCBI chr 1:224,054,293...243,747,962 JBrowse link
Q Bmd35 Bone mineral density QTL 35 IDA 1.0E-4 4.5 RGD PMID:18282130 RGD:2293456 NCBI chr 4:137,755,016...181,392,681 JBrowse link
Q Bmd36 Bone mineral density QTL 36 IDA 1.0E-4 7.4 RGD PMID:18282130 RGD:2293456 NCBI chr15:33,611,058...71,477,291 JBrowse link
Q Bmd37 Bone mineral density QTL 37 IDA 1.0E-4 6.6 RGD PMID:18282130 RGD:2293456 NCBI chr15:33,611,058...71,477,291 JBrowse link
Q Bmd39 Bone mineral density QTL 39 IDA RGD PMID:18282130 RGD:2293456 NCBI chr 8:54,043,744...98,968,765 JBrowse link
Q Bmd89 Bone mineral density QTL 89 IDA 4.1 RGD PMID:18282130 RGD:2293456 NCBI chr 2:88,862,519...133,862,519 JBrowse link
Q Bss1 Bone structure and strength QTL 1 IDA 4.8 RGD PMID:16059631 RGD:1549683 NCBI chr 1:172,609,619...217,609,619 JBrowse link
Q Bss105 Bone structure and strength QTL 105 IDA 8.1 RGD PMID:16059631 RGD:1549683 NCBI chr 4:109,827,074...154,827,074 JBrowse link
Q Bss106 Bone structure and strength QTL 106 IDA 7.9 RGD PMID:16059631 RGD:1549683 NCBI chr 5:106,906,205...151,906,205 JBrowse link
Q Bss107 Bone structure and strength QTL 107 IDA 7.0 RGD PMID:16059631 RGD:1549683 NCBI chr 2:211,744,537...249,053,267 JBrowse link
Q Bss108 Bone structure and strength QTL 108 IDA 5.3 RGD PMID:16059631 RGD:1549683 NCBI chr 2:211,744,537...249,053,267 JBrowse link
Q Bss109 Bone structure and strength QTL 109 IDA RGD PMID:16059631 RGD:1549683 NCBI chr 5:106,906,205...151,906,205 JBrowse link
Q Bss110 Bone structure and strength QTL 1 IDA 8.4 RGD PMID:16059631 RGD:1549683 NCBI chr 5:106,906,205...151,906,205 JBrowse link
Q Bss114 Bone structure and strength QTL 114 IDA 2.87E-7 6.54 RGD PMID:26297441 RGD:11528619 NCBI chr 5:124,399,325...126,768,268 JBrowse link
Q Bss117 Bone structure and strength QTL 117 IDA 3.89E-7 6.41 RGD PMID:26297441 RGD:11528619 NCBI chr10:44,947,163...45,433,933 JBrowse link
Q Bss118 Bone structure and strength QTL 118 IDA 2.2E-7 6.658 RGD PMID:26297441 RGD:11528619 NCBI chr11:40,638,763...43,376,331 JBrowse link
Q Bss13 Bone structure and strength QTL 13 IDA 8.0 RGD PMID:16461031 RGD:1578307 NCBI chr 4:60,220,938...105,220,938 JBrowse link
Q Bss2 Bone structure and strength QTL 2 IDA 7.5 RGD PMID:16059631 RGD:1549683 NCBI chr 2:211,744,537...249,053,267 JBrowse link
Q Bss30 Bone structure and strength QTL 30 IDA 1.0E-4 32.65 RGD PMID:18158281 RGD:2293455 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bss31 Bone structure and strength QTL 31 IDA 1.0E-4 5.05 RGD PMID:18158281 RGD:2293455 NCBI chr 6:1...42,487,980 JBrowse link
Q Bss32 Bone structure and strength QTL 32 IDA 1.0E-4 7.64 RGD PMID:18158281 RGD:2293455 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bss33 Bone structure and strength QTL 33 IDA 1.0E-4 9.34 RGD PMID:18158281 RGD:2293455 NCBI chr10:69,738,412...107,211,142 JBrowse link
Q Bss34 Bone structure and strength QTL 34 IDA 1.0E-4 4.61 RGD PMID:18158281 RGD:2293455 NCBI chr13:65,103,704...106,807,694 JBrowse link
Q Bss35 Bone structure and strength QTL 35 IDA 2.0E-4 4.59 RGD PMID:18158281 RGD:2293455 NCBI chr18:28,964,853...73,964,853 JBrowse link
Q Bss36 Bone structure and strength QTL 36 IDA 1.0E-4 10.66 RGD PMID:18158281 RGD:2293455 NCBI chr 1:201,554,356...246,554,356 JBrowse link
Q Bss37 Bone structure and strength QTL 37 IDA 1.0E-4 4.64 RGD PMID:18158281 RGD:2293455 NCBI chr 5:120,740,824...151,018,848 JBrowse link
Q Bss38 Bone structure and strength QTL 38 IDA 1.0E-4 7.05 RGD PMID:18158281 RGD:2293455 NCBI chr 1:201,554,356...246,554,356 JBrowse link
Q Bss39 Bone structure and strength QTL 39 IDA 1.0E-4 7.1 RGD PMID:18158281 RGD:2293455 NCBI chr 1:201,554,356...246,554,356 JBrowse link
Q Bss4 Bone structure and strength QTL 4 IDA 9.2 RGD PMID:16059631 RGD:1549683 NCBI chr 5:106,906,205...151,906,205 JBrowse link
Q Bss40 Bone structure and strength QTL 40 IDA 1.0E-4 5.66 RGD PMID:18158281 RGD:2293455 NCBI chr10:1...35,225,947 JBrowse link
Q Bss5 Bone structure and strength QTL 5 IDA 9.8 RGD PMID:16059631 RGD:1549683 NCBI chr 7:24,751,841...69,751,841 JBrowse link
Q Bss7 Bone structure and strength QTL 7 IDA 6.4 RGD PMID:16059631 RGD:1549683 NCBI chr15:75,788,062...101,769,107 JBrowse link
femur width term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss15 Bone structure and strength QTL 15 IDA 19.6 RGD PMID:16461031 RGD:1578307 NCBI chr 4:87,327,165...132,327,165 JBrowse link
Q Bss18 Bone structure and strength QTL 18 IDA 3.6 RGD PMID:16461031 RGD:1578307 NCBI chr10:96,703,043...107,057,807 JBrowse link
inguinal fat pad mass term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw62 Body weight QTL62 IDA 4.05 RGD PMID:11374884 RGD:1357168 NCBI chr 1:22,340,647...67,340,647 JBrowse link
Q Bw94 Body weight QTL 94 IDA 0.01 RGD PMID:19584880 RGD:2312642 NCBI chr 3:98,535,255...168,026,850 JBrowse link
Q Bw95 Body weight QTL 95 IDA 0.05 RGD PMID:19584880 RGD:2312642 NCBI chr16:832,236...59,492,508 JBrowse link
intramuscular adipose amount term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw61 Body weight QTL61 IDA 1.0E-4 3.4 RGD PMID:11853145 RGD:619672 NCBI chr 1:173,108,781...218,108,781 JBrowse link
joint integrity trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Aia1 Adjuvant induced arthritis QTL 1 IDA 0.001 18.0 RGD PMID:9780220 RGD:61035 NCBI chr20:2,646,395...4,597,031 JBrowse link
Q Aia10 Adjuvant induced arthritis QTL 10 IDA 3.41 RGD PMID:19526527 RGD:2316974 NCBI chr15:75,788,062...101,769,107 JBrowse link
Q Aia11 Adjuvant induced arthritis QTL 11 IDA 4.06 RGD PMID:19526527 RGD:2316974 NCBI chr17:60,781,426...86,533,673 JBrowse link
Q Aia12 Adjuvant induced arthritis QTL 12 IDA 4.24 RGD PMID:19526527 RGD:2316974 NCBI chr17:38,281,509...83,281,509 JBrowse link
Q Aia13 Adjuvant induced arthritis QTL 13 IDA 2.9 RGD PMID:19526527 RGD:2316974 NCBI chr 2:76,539,322...77,991,361 JBrowse link
Q Aia14 Adjuvant induced arthritis QTL 14 IDA 3.29 RGD PMID:19526527 RGD:2316974
Q Aia15 Adjuvant induced arthritis QTL 15 IDA 2.46 RGD PMID:19526527 RGD:2316974 NCBI chr 7:17,004,598...62,004,598 JBrowse link
Q Aia16 Adjuvant induced arthritis QTL 16 IDA 2.71 RGD PMID:19526527 RGD:2316974 NCBI chr 7:59,238,038...104,238,038 JBrowse link
Q Aia17 Adjuvant induced arthritis QTL 17 IDA 2.13 RGD PMID:19526527 RGD:2316974 NCBI chr 7:81,737,938...126,737,938 JBrowse link
Q Aia18 Adjuvant induced arthritis QTL 18 IDA 2.42 RGD PMID:19526527 RGD:2316974 NCBI chr 8:8,736,635...53,736,635 JBrowse link
Q Aia19 Adjuvant induced arthritis QTL 19 IDA 2.98 RGD PMID:19526527 RGD:2316974 NCBI chr10:66,978,955...107,211,142 JBrowse link
Q Aia2 Adjuvant induced arthritis QTL 2 IDA 5.8 RGD PMID:9780220 RGD:61035 NCBI chr 4:39,505,275...73,892,441 JBrowse link
Q Aia20 Adjuvant induced arthritis QTL 20 IDA 3.38 RGD PMID:19526527 RGD:2316974 NCBI chr10:37,565,079...82,565,079 JBrowse link
Q Aia21 Adjuvant induced arthritis QTL 21 IDA 2.75 RGD PMID:19526527 RGD:2316974 NCBI chr13:9,831,541...54,831,541 JBrowse link
Q Aia22 Adjuvant induced arthritis QTL 22 IDA 2.29 RGD PMID:19526527 RGD:2316974 NCBI chr13:1...34,266,636 JBrowse link
Q Aia23 Adjuvant induced arthritis QTL 23 IDA 2.3 RGD PMID:19526527 RGD:2316974 NCBI chr13:11,766,535...32,331,607 JBrowse link
Q Aia24 Adjuvant induced arthritis QTL 24 IDA 2.06 RGD PMID:19526527 RGD:2316974 NCBI chr15:52,847,908...73,690,657 JBrowse link
Q Aia25 Adjuvant induced arthritis QTL 25 IDA 2.69 RGD PMID:19526527 RGD:2316974 NCBI chr17:50,909,196...60,781,426 JBrowse link
Q Aia26 Adjuvant induced arthritis QTL 26 IDA 3.22 RGD PMID:19526527 RGD:2316974 NCBI chr17:38,281,509...83,281,509 JBrowse link
Q Aia27 Adjuvant induced arthritis QTL 27 IDA 2.83 RGD PMID:19526527 RGD:2316974 NCBI chr20:2,892,597...26,381,954 JBrowse link
Q Aia3 Adjuvant induced arthritis QTL 3 IDA 3.9 RGD PMID:9780220 RGD:61035 NCBI chr 4:86,730,991...131,730,991 JBrowse link
Q Aia4 Adjuvant induced arthritis QTL 4 IDA 3.0 RGD PMID:9780220 RGD:61035 NCBI chr15:55,596,089...91,365,858 JBrowse link
Q Aia5 Adjuvant induced arthritis QTL 5 IDA 0.01 RGD PMID:11953987 RGD:625379 NCBI chr10:23,444,813...104,060,283 JBrowse link
Q Aia6 Adjuvant induced arthritis QTL 6 IDA 4.31 RGD PMID:19526527 RGD:2316974 NCBI chr10:66,978,955...107,211,142 JBrowse link
Q Aia7 Adjuvant induced arthritis QTL 7 IDA 3.82 RGD PMID:19526527 RGD:2316974 NCBI chr10:37,565,079...82,565,079 JBrowse link
Q Aia8 Adjuvant induced arthritis QTL 8 IDA 3.9700000286102295 RGD PMID:19526527 RGD:2316974 NCBI chr13:9,831,541...54,831,541 JBrowse link
Q Aia9 Adjuvant induced arthritis QTL 9 IDA 4.62 RGD PMID:19526527 RGD:2316974 NCBI chr13:11,766,535...32,331,607 JBrowse link
Q Cia1 Collagen induced arthritis QTL 1 IDA RGD PMID:11001927 RGD:61067 NCBI chr20:3,621,656...14,101,050 JBrowse link
Q Cia10 Collagen induced arthritis QTL 10 IDA 3.4 RGD PMID:9870869 RGD:61063 NCBI chr 2:179,946,951...224,946,951 JBrowse link
Q Cia11 Collagen induced arthritis QTL 11 IDA 5.6 RGD PMID:10857786 RGD:61066 NCBI chr 3:30,356,773...98,535,386 JBrowse link
Q Cia12 Collagen induced arthritis QTL 12 IDA 4.6 RGD PMID:10857786 RGD:61066 NCBI chr12:13,635,523...35,682,913 JBrowse link
Q Cia13 Collagen induced arthritis QTL 13 IDA 4.5 RGD PMID:10857786 RGD:61066 NCBI chr 4:132,642,577...167,139,601 JBrowse link
Q Cia14 Collagen induced arthritis QTL 14 IDA 3.0 RGD PMID:10857786 RGD:61066 NCBI chr19:10,827,970...43,544,039 JBrowse link
Q Cia15 Collagen induced arthritis QTL 15 IDA 4.6 RGD PMID:11001927 RGD:61067 NCBI chr 9:5,109,826...42,921,101 JBrowse link
Q Cia16 Collagen induced arthritis QTL 16 IDA 3.2 RGD PMID:11001927 RGD:61067 NCBI chr10:6,357,896...96,121,100 JBrowse link
Q Cia17 Collagen induced arthritis QTL 17 IDA 4.6 RGD PMID:11001927 RGD:61067 NCBI chr18:31,359,408...70,263,868 JBrowse link
Q Cia18 Collagen induced arthritis QTL 18 IDA 3.1 RGD PMID:11001927 RGD:61067 NCBI chr  X:14,843,113...120,568,734 JBrowse link
Q Cia19 Collagen induced arthritis QTL 19 IDA 4.4 RGD PMID:11001927 RGD:61067 NCBI chr  X:65,612,192...120,568,734 JBrowse link
Q Cia2 Collagen induced arthritis QTL 2 IDA 5.0 RGD PMID:11001927 RGD:61067 NCBI chr 1:78,430,754...91,209,302 JBrowse link
Q Cia20 Collagen induced arthritis QTL 20 IDA 3.2 RGD PMID:11003387 RGD:631168 NCBI chr10:23,444,813...104,060,283 JBrowse link
Q Cia21 Collagen induced arthritis QTL 21 IDA 3.1 RGD PMID:11003387 RGD:631168 NCBI chr10:14,487,011...104,060,283 JBrowse link
Q Cia22 Collagen induced arthritis QTL 22 IDA 8.9 RGD PMID:11003387 RGD:631168 NCBI chr10:40,035,094...104,060,283 JBrowse link
Q Cia23 Collagen induced arthritis QTL 23 IDA 3.9 RGD PMID:11003387 RGD:631168 NCBI chr10:40,035,094...104,060,283 JBrowse link
Q Cia24 Collagen induced arthritis QTL 24 IDA 4.5 RGD PMID:10857786 RGD:61066 NCBI chr 4:146,565,735...175,236,377 JBrowse link
Q Cia25 Collagen induced arthritis QTL 25 IDA 4.7 RGD PMID:15334486 RGD:1285224 NCBI chr12:19,610,889...35,682,913 JBrowse link
Q Cia26 Collagen induced arthritis QTL 26 IDA 3.6 RGD PMID:15334486 RGD:1285224 NCBI chr18:54,709,769...83,828,827 JBrowse link
Q Cia27 Collagen induced arthritis QTL 27 IDA 0.0045 2.6 RGD PMID:9870869 RGD:61063 NCBI chr10:76,452,683...107,211,142 JBrowse link
Q Cia28 Collagen induced arthritis QTL 28 IDA RGD PMID:15944295 RGD:1359065 NCBI chr10:96,120,911...104,060,283 JBrowse link
Q Cia29 Collagen induced arthritis QTL 29 IDA RGD PMID:15944295 RGD:1359065 NCBI chr10:33,973,921...78,973,921 JBrowse link
Q Cia3 Collagen induced arthritis QTL 3 IDA 4.8 RGD PMID:8782824 RGD:61062 NCBI chr 4:103,194,656...148,194,656 JBrowse link
Q Cia4 Collagen induced arthritis QTL 4 IDA 5.3 RGD PMID:8782824 RGD:61062 NCBI chr 7:58,113,224...62,004,598 JBrowse link
Q Cia5 Collagen induced arthritis QTL 5 IDA 4.9 RGD PMID:11001927 RGD:61067 NCBI chr10:91,228,102...104,060,283 JBrowse link
Q Cia6 Collagen induced arthritis QTL 6 IDA RGD PMID:11001927 RGD:61067 NCBI chr 8:82,460,758...122,812,818 JBrowse link
Q Cia7 Collagen induced arthritis QTL 7 IDA 1.0E-4 4.6 RGD PMID:11001927 RGD:61067 NCBI chr 2:59,324,377...141,596,857 JBrowse link
Q Cia8 Collagen induced arthritis QTL 8 IDA 5.1 RGD PMID:10398805 RGD:61069
Q Cia9 Collagen induced arthritis QTL 9 IDA RGD PMID:9870869 RGD:61063
Q Oia2 Oil induced arthritis QTL 2 IDA 0.001 RGD PMID:9600974 RGD:61087 NCBI chr 4:138,503,169...173,369,699 JBrowse link
Q Oia3 Oil induced arthritis QTL 3 IDA 0.001 RGD PMID:9600974 RGD:61087 NCBI chr10:87,307,617...107,211,142 JBrowse link
Q Oia4 Oil induced arthritis QTL 4 IDA RGD PMID:11230175 RGD:62404 NCBI chr10:75,631,887...87,055,282 JBrowse link
Q Oia5 Oil induced arthritis QTL 5 IDA RGD PMID:11230175 RGD:62404 NCBI chr10:87,055,121...107,211,142 JBrowse link
Q Oia6 Oil induced arthritis QTL 6 IDA RGD PMID:11230175 RGD:62404 NCBI chr10:97,010,147...104,670,812 JBrowse link
Q Oia7 Oil induced arthritis QTL 7 IDA 1.0E-4 RGD PMID:12915467 RGD:730281 NCBI chr 4:156,050,654...157,232,313 JBrowse link
Q Oia8 Oil induced arthritis QTL 8 IDA RGD PMID:12571866 RGD:629560 NCBI chr 4:138,503,169...173,369,699 JBrowse link
Q Pia1 Pristane induced arthritis QTL 1 IDA RGD PMID:9843218 RGD:61089
Q Pia10 Pristane induced arthritis QTL 10 IDA 0.01 RGD PMID:12209529 RGD:629569 NCBI chr10:23,444,813...104,060,283 JBrowse link
Q Pia11 Pristane induced arthritis QTL 11 IDA 5.3 RGD PMID:12111642 RGD:631225 NCBI chr 1:136,830,018...181,830,018 JBrowse link
Q Pia12 Pristane induced arthritis QTL 12 IDA 8.9 RGD PMID:12111642 RGD:631225 NCBI chr12:20,259,417...23,672,083 JBrowse link
Q Pia13 Pristane induced arthritis QTL 13 IDA 3.3 RGD PMID:12111642 RGD:631225 NCBI chr14:40,793,460...98,037,301 JBrowse link
Q Pia14 Pristane induced arthritis QTL 14 IDA 4.4 RGD PMID:12111642 RGD:631225 NCBI chr16:55,711,087...83,402,471 JBrowse link
Q Pia15 Pristane induced arthritis QTL 15 IDA 3.1 RGD PMID:12817024 RGD:631850 NCBI chr10:1...24,158,324 JBrowse link
Q Pia16 Pristane induced arthritis QTL 16 IDA 3.9 RGD PMID:12817024 RGD:631850 NCBI chr 6:45,790,088...104,200,226 JBrowse link
Q Pia17 Pristane induced arthritis QTL 17 IDA 4.7 RGD PMID:12817024 RGD:631850 NCBI chr 7:73,829,340...130,221,005 JBrowse link
Q Pia18 Pristane induced arthritis QTL 18 IDA 4.0 RGD PMID:12817024 RGD:631850 NCBI chr 8:75,311,938...82,925,521 JBrowse link
Q Pia19 Pristane induced arthritis QTL 19 IDA 3.4 RGD PMID:12817024 RGD:631850 NCBI chr18:73,997,140...79,532,029 JBrowse link
Q Pia2 Pristane induced arthritis QTL 2 IDA 3.9 RGD PMID:9843218 RGD:61089 NCBI chr 4:21,333,343...62,278,020 JBrowse link
Q Pia20 Pristane induced arthritis QTL 20 IDA 3.55 RGD PMID:14624754 RGD:730280 NCBI chr14:9,088,978...39,057,237 JBrowse link
Q Pia21 Pristane induced arthritis QTL 21 IDA 4.8 RGD PMID:12817024 RGD:631850 NCBI chr20:3,621,656...4,606,812 JBrowse link
Q Pia22 Pristane induced arthritis QTL 22 IDA 53.1 RGD PMID:12817024 RGD:631850 NCBI chr12:1...44,465,750 JBrowse link
Q Pia23 Pristane induced arthritis QTL 23 IDA 5.3 RGD PMID:12817024 RGD:631850 NCBI chr 4:131,730,738...167,139,601 JBrowse link
Q Pia24 Pristane induced arthritis QTL 24 IDA RGD PMID:14611807 RGD:728382 NCBI chr 6:112,636,280...140,994,061 JBrowse link
Q Pia25 Pristane induced arthritis QTL 25 IDA RGD PMID:15944295 RGD:1359065 NCBI chr10:96,120,911...104,060,283 JBrowse link
Q Pia26 Pristane induced arthritis QTL 26 IDA RGD PMID:15944295 RGD:1359065 NCBI chr10:31,224,026...75,632,053 JBrowse link
Q Pia3 Pristane induced arthritis QTL 3 IDA 4.5 RGD PMID:9843218 RGD:61089 NCBI chr 6:94,968,928...137,848,904 JBrowse link
Q Pia4 Pristane induced arthritis QTL 4 IDA 8.4 RGD PMID:9843218 RGD:61089 NCBI chr12:13,635,523...30,827,399 JBrowse link
Q Pia40 Pristane induced arthritis QTL 40 IDA 1.0E-4 RGD PMID:19180494 RGD:2306838 NCBI chr20:1,527,959...5,304,575 JBrowse link
Q Pia41 Pristane induced arthritis QTL 41 IDA RGD PMID:20072140 RGD:6892695 NCBI chr 1:178,810,256...180,814,005 JBrowse link
Q Pia42 Pristane induced arthritis QTL 42 IDA RGD PMID:17329308 RGD:1600250 NCBI chr12:19,610,870...42,828,880 JBrowse link
Q Pia5 Pristane induced arthritis QTL 5 IDA 4.5 RGD PMID:9843218 RGD:61089 NCBI chr 4:62,277,855...128,289,560 JBrowse link
Q Pia6 Pristane induced arthritis QTL 6 IDA 4.9 RGD PMID:9843218 RGD:61089 NCBI chr14:18,631,345...42,337,007 JBrowse link
Q Pia7 Pristane induced arthritis QTL 7 IDA 4.3 RGD PMID:11090241 RGD:629570 NCBI chr 4:131,730,738...167,139,601 JBrowse link
Q Pia8 Pristane induced arthritis QTL 8 IDA 4.7 RGD PMID:11090241 RGD:629570 NCBI chr 1:1...65,833,076 JBrowse link
Q Pia9 Pristane induced arthritis QTL 9 IDA 0.048 4.5 RGD PMID:12571866 RGD:629560 NCBI chr 4:80,694,870...125,694,870 JBrowse link
Q Scwia1 Streptococcal cell wall induced arthritis QTL 1 IDA 2.3 RGD PMID:10331011 RGD:61064 NCBI chr 4:106,805,662...151,805,662 JBrowse link
long bone metaphysis morphology trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss59 Bone structure and strength QTL 59 IDA 1.0E-4 2.9 RGD PMID:19113924 RGD:2312767 NCBI chr 5:3,844,018...26,141,981 JBrowse link
Q Bss65 Bone structure and strength QTL 65 IDA 1.0E-4 3.9 RGD PMID:19113924 RGD:2312767 NCBI chr15:60,990,468...73,690,657 JBrowse link
Q Bss71 Bone structure and strength QTL 71 IDA 1.0E-4 2.6 RGD PMID:19113924 RGD:2312767 NCBI chr 1:118,944,747...163,944,747 JBrowse link
Q Bss85 Bone structure and strength QTL 85 IDA 1.0E-4 0.8 RGD PMID:19113924 RGD:2312767 NCBI chr18:14,951,337...59,951,337 JBrowse link
lumbar vertebra area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd2 Bone mineral density QTL 2 IDA 1.0E-4 13.4 RGD PMID:16180139 RGD:1553896 NCBI chr 2:114,837,675...212,549,332 JBrowse link
Q Bss119 Bone structure and strength QTL 119 IDA 4.0E-17 16.39 RGD PMID:26297441 RGD:11528619 NCBI chr12:20,873,419...21,346,740 JBrowse link
lumbar vertebra mineral mass term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd4 Bone mineral density QTL 4 IDA 1.0E-4 9.4 RGD PMID:16180139 RGD:1553896 NCBI chr10:19,816,042...99,406,971 JBrowse link
Q Bmd42 Bone mineral density QTL 42 IDA 1.0E-4 8.4 RGD PMID:18707222 RGD:2300109 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bmd44 Bone mineral density QTL 44 IDA 1.0E-4 5.4 RGD PMID:18707222 RGD:2300109 NCBI chr 1:56,949,932...101,949,932 JBrowse link
Q Bmd45 Bone mineral density QTL 45 IDA 1.0E-4 12.1 RGD PMID:18707222 RGD:2300109 NCBI chr 2:88,862,519...133,862,519 JBrowse link
Q Bmd49 Bone mineral density QTL 49 IDA 1.0E-4 4.8 RGD PMID:18707222 RGD:2300109 NCBI chr 2:88,862,519...133,862,519 JBrowse link
Q Bmd5 Bone mineral density QTL 5 IDA 1.0E-4 12.1 RGD PMID:16180139 RGD:1553896
Q Bmd53 Bone mineral density QTL 53 IDA 1.0E-4 5.4 RGD PMID:18707222 RGD:2300109
Q Bmd58 Bone mineral density QTL 58 IDA 1.0E-4 4.9 RGD PMID:18707222 RGD:2300109 NCBI chr10:26,944,628...71,944,628 JBrowse link
Q Bmd59 Bone mineral density QTL 59 IDA 1.0E-4 7.1 RGD PMID:18707222 RGD:2300109 NCBI chr12:10,474,137...46,669,029 JBrowse link
Q Bmd62 Bone mineral density QTL 62 IDA 1.0E-4 12.8 RGD PMID:18707222 RGD:2300109 NCBI chr15:11,111,142...56,111,142 JBrowse link
Q Bmd64 Bone mineral density QTL 64 IDA 1.0E-4 5.3 RGD PMID:18707222 RGD:2300109 NCBI chr16:37,752,156...82,752,156 JBrowse link
Q Bmd66 Bone mineral density QTL 66 IDA 1.0E-4 13.1 RGD PMID:18707222 RGD:2300109 NCBI chr18:28,964,853...73,964,853 JBrowse link
lumbar vertebra morphology trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss44 Bone structure and strength QTL 44 IDA 1.0E-4 10.97 RGD PMID:18158281 RGD:2293455 NCBI chr 2:43,162,366...148,478,373 JBrowse link
Q Bss45 Bone structure and strength QTL 45 IDA 1.0E-4 5.13 RGD PMID:18158281 RGD:2293455 NCBI chr16:37,752,156...82,752,156 JBrowse link
Q Bss46 Bone structure and strength QTL 46 IDA 1.0E-4 8.8 RGD PMID:18158281 RGD:2293455 NCBI chr18:11,791,518...63,636,873 JBrowse link
lumbar vertebra size trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss41 Bone structure and strength QTL 41 IDA 1.0E-4 9.38 RGD PMID:18158281 RGD:2293455 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bss42 Bone structure and strength QTL 42 IDA 1.0E-4 7.25 RGD PMID:18158281 RGD:2293455 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bss43 Bone structure and strength QTL 43 IDA 1.0E-4 5.33 RGD PMID:18158281 RGD:2293455 NCBI chr10:59,209,888...104,209,888 JBrowse link
Q Bss47 Bone structure and strength QTL 47 IDA 1.0E-4 7.25 RGD PMID:18158281 RGD:2293455 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bss48 Bone structure and strength QTL 48 IDA 1.0E-4 16.05 RGD PMID:18158281 RGD:2293455
Q Bss49 Bone structure and strength QTL 49 IDA 1.0E-4 5.61 RGD PMID:18158281 RGD:2293455 NCBI chr12:10,474,137...46,669,029 JBrowse link
Q Bss50 Bone structure and strength QTL 50 IDA 3.0E-4 4.64 RGD PMID:18158281 RGD:2293455 NCBI chr18:1...34,291,613 JBrowse link
lumbar vertebra strength trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss6 Bone structure and strength QTL 6 IDA 4.0 RGD PMID:16059631 RGD:1549683 NCBI chr10:57,576,521...102,576,521 JBrowse link
Q Bss8 Bone structure and strength QTL 8 IDA 4.0 RGD PMID:16059631 RGD:1549683 NCBI chr19:1...31,963,836 JBrowse link
mesenteric fat pad mass term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw1 Body weight QTL1 IDA 5.09 RGD PMID:11087657 RGD:619690 NCBI chr 2:43,171,017...83,575,226 JBrowse link
Q Bw3 Body weight QTL3 IDA 5.9 RGD PMID:11087657 RGD:619690 NCBI chr 8:69,349,194...112,783,834 JBrowse link
retroperitoneal fat pad mass term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw125 Body weight QTL 125 IEP 0.0047 3.0 RGD PMID:20159938 RGD:7365117 NCBI chr10:64,890,616...107,211,142 JBrowse link
Q Bw166 Body weight QTL 166 IDA 0.001 14.08 RGD PMID:25003539 RGD:8694157 NCBI chr 2:182,171,407...227,171,407 JBrowse link
Q Bw167 Body weight QTL 167 IDA 0.001 22.46 RGD PMID:25003539 RGD:8694157 NCBI chr 3:91,797,474...136,797,474 JBrowse link
Q Bw168 Body weight QTL 168 IDA 0.001 9.57 RGD PMID:25003539 RGD:8694157 NCBI chr 4:40,433,414...85,433,414 JBrowse link
Q Bw169 Body weight QTL 169 IDA 0.001 17.61 RGD PMID:25003539 RGD:8694157 NCBI chr 5:111,416,838...156,416,838 JBrowse link
Q Bw170 Body weight QTL 170 IDA 0.001 12.07 RGD PMID:25003539 RGD:8694157 NCBI chr 8:71,888,757...116,888,757 JBrowse link
Q Bw171 Body weight QTL 171 IDA 0.001 16.22 RGD PMID:25003539 RGD:8694157
Q Bw172 Body weight QTL 172 IDA 0.001 8.33 RGD PMID:25003539 RGD:8694157 NCBI chr16:24,325,513...69,325,513 JBrowse link
Q Bw2 Body weight QTL2 IDA 4.2 RGD PMID:11087657 RGD:619690 NCBI chr 4:9,940,885...44,463,908 JBrowse link
Q Bw4 Body weight QTL4 IDA 5.31 RGD PMID:11087657 RGD:619690 NCBI chr 9:5,109,826...50,109,826 JBrowse link
Q Bw5 Body weight QTL5 IDA 5.43 RGD PMID:11087657 RGD:619690 NCBI chr14:11,030,812...30,320,092 JBrowse link
Q Bw60 Body weight QTL60 IDA 4.51 RGD PMID:11087657 RGD:619690 NCBI chr14:79,950,921...95,876,975 JBrowse link
subcutaneous adipose mass term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scfw1 Subcutaneous fat weight QTL 1 IDA 0.001 5.8 RGD PMID:25003539 RGD:8694157 NCBI chr 2:182,171,407...227,171,407 JBrowse link
Q Scfw2 Subcutaneous fat weight QTL 2 IDA 0.001 5.54 RGD PMID:25003539 RGD:8694157 NCBI chr 4:1...31,934,116 JBrowse link
Q Scfw3 Subcutaneous fat weight QTL 3 IDA 0.001 4.57 RGD PMID:25003539 RGD:8694157 NCBI chr 6:1...41,223,769 JBrowse link
Q Scfw4 Subcutaneous fat weight QTL 4 IDA 0.001 3.37 RGD PMID:25003539 RGD:8694157
Q Scfw5 Subcutaneous fat weight QTL 5 IDA 0.001 5.55 RGD PMID:25003539 RGD:8694157 NCBI chr 9:1...37,999,212 JBrowse link
Q Scfw6 Subcutaneous fat weight QTL 6 IDA 0.001 8.62 RGD PMID:25003539 RGD:8694157
tibia area term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss100 Bone structure and strength QTL 100 IDA 4.7 RGD PMID:21818327 RGD:5684953 NCBI chr 8:50,095,249...82,460,899 JBrowse link
Q Bss104 Bone structure and strength QTL 104 IDA 3.9 RGD PMID:21818327 RGD:5684953 NCBI chr  X:113,805,422...126,975,220 JBrowse link
Q Bss54 Bone structure and strength QTL 54 IDA 1.0E-4 3.5 RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss61 Bone structure and strength QTL 61 IDA 1.0E-4 0.9 RGD PMID:19113924 RGD:2312767 NCBI chr10:5,387,014...50,387,014 JBrowse link
Q Bss67 Bone structure and strength QTL 67 IDA 1.0E-4 3.1 RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,481,312...82,174,945 JBrowse link
Q Bss72 Bone structure and strength QTL 72 IDA 1.0E-4 2.6 RGD PMID:19113924 RGD:2312767 NCBI chr 3:27,494,621...50,302,886 JBrowse link
Q Bss86 Bone structure and strength QTL 86 IDA 4.1 RGD PMID:20699128 RGD:4889918 NCBI chr 1:53,895,117...82,174,945 JBrowse link
Q Bss87 Bone structure and strength QTL 87 IDA 6.7 RGD PMID:20699128 RGD:4889918 NCBI chr 1:53,895,117...82,174,945 JBrowse link
Q Bss90 Bone structure and strength QTL 90 IDA 4.1 RGD PMID:20699128 RGD:4889918 NCBI chr 9:86,369,631...92,058,970 JBrowse link
Q Bss91 Bone structure and strength QTL 91 IDA 4.0 RGD PMID:20699128 RGD:4889918 NCBI chr10:82,564,856...92,369,470 JBrowse link
Q Bss92 Bone structure and strength QTL 92 IDA 3.9 RGD PMID:20699128 RGD:4889918 NCBI chr14:82,057,471...95,876,975 JBrowse link
Q Bss94 Bone structure and strength QTL 94 IDA 3.8 RGD PMID:20699128 RGD:4889918 NCBI chr 1:49,361,465...82,174,945 JBrowse link
Q Bss95 Bone structure and strength QTL 95 IDA 4.4 RGD PMID:20699128 RGD:4889918 NCBI chr 3:1...36,847,613 JBrowse link
Q Bss99 Bone structure and strength QTL 99 IDA 3.1 RGD PMID:21818327 RGD:5684953
tibia length term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss51 Bone structure and strength QTL 51 IDA 1.0E-4 3.8 RGD PMID:19113924 RGD:2312767 NCBI chr 1:1...32,356,093 JBrowse link
Q Bss53 Bone structure and strength QTL 53 IDA 1.0E-4 4.3 RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss60 Bone structure and strength QTL 60 IDA 1.0E-4 4.1 RGD PMID:19113924 RGD:2312767 NCBI chr 8:50,095,249...82,460,899 JBrowse link
Q Bss66 Bone structure and strength QTL 66 IDA 1.0E-4 3.4 RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,481,312...82,174,945 JBrowse link
Q Lmblg1 Limb length QTL 1 IDA 6.4 RGD PMID:15452030 RGD:1302893 NCBI chr 1:151,162,512...201,278,233 JBrowse link
Q Lmblg2 Limb length QTL 2 IDA 6.0 RGD PMID:15452030 RGD:1302893 NCBI chr17:4,299,130...69,599,340 JBrowse link
Q Plsm3 Polydactyly-luxate syndrome (PLS) morphotypes QTL 3 IDA 3.0E-4 RGD PMID:8997636 RGD:632346 NCBI chr 7:1...34,000,259 JBrowse link
tibia mineral mass term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd69 Bone mineral density QTL 69 IDA 1.0E-4 4.4 RGD PMID:19113924 RGD:2312767 NCBI chr 1:1...32,356,093 JBrowse link
Q Bmd70 Bone mineral density QTL 70 IDA 1.0E-4 3.6 RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bmd71 Bone mineral density QTL 71 IDA 1.0E-4 0.9 RGD PMID:19113924 RGD:2312767 NCBI chr10:5,387,014...50,387,014 JBrowse link
Q Bmd72 Bone mineral density QTL 72 IDA 1.0E-4 2.5 RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,481,312...82,174,945 JBrowse link
Q Bmd73 Bone mineral density QTL 73 IDA 1.0E-4 3.9 RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,481,312...82,174,945 JBrowse link
Q Bmd74 Bone mineral density QTL 74 IDA 1.0E-4 4.0 RGD PMID:19113924 RGD:2312767 NCBI chr 1:82,174,743...118,944,897 JBrowse link
Q Bmd75 Bone mineral density QTL 75 IDA 1.0E-4 4.1 RGD PMID:19113924 RGD:2312767 NCBI chr 2:215,377,404...237,938,339 JBrowse link
Q Bmd76 Bone mineral density QTL 76 IDA 1.0E-4 3.6 RGD PMID:19113924 RGD:2312767 NCBI chr 3:27,494,621...50,302,886 JBrowse link
Q Bmd77 Bone mineral density QTL 77 IDA 1.0E-4 2.2 RGD PMID:19113924 RGD:2312767 NCBI chr 3:27,494,621...50,302,886 JBrowse link
Q Bmd78 Bone mineral density QTL 78 IDA 1.0E-4 3.1 RGD PMID:19113924 RGD:2312767 NCBI chr 5:144,377,876...161,317,411 JBrowse link
Q Bmd79 Bone mineral density QTL 79 IDA 1.0E-4 2.3 RGD PMID:19113924 RGD:2312767 NCBI chr 7:94,811,085...116,738,842 JBrowse link
Q Bmd80 Bone mineral density QTL 80 IDA 1.0E-4 3.2 RGD PMID:19113924 RGD:2312767 NCBI chr10:19,606,483...64,606,483 JBrowse link
Q Bmd81 Bone mineral density QTL 81 IDA 4.3 RGD PMID:20699128 RGD:4889918 NCBI chr 3:38,710,365...50,302,886 JBrowse link
Q Bmd82 Bone mineral density QTL 82 IDA 2.8 RGD PMID:21818327 RGD:5684953 NCBI chr 2:59,324,377...103,795,077 JBrowse link
Q Bmd83 Bone mineral density QTL 82 IDA 4.8 RGD PMID:21818327 RGD:5684953
Q Bmd84 Bone mineral density QTL 84 IDA 4.1 RGD PMID:21818327 RGD:5684953 NCBI chr 8:42,692,684...50,095,447 JBrowse link
Q Bmd85 Bone mineral density QTL 85 IDA 0.024 4.7 RGD PMID:21818327 RGD:5684953 NCBI chr 2:59,324,377...103,795,077 JBrowse link
Q Bmd86 Bone mineral density QTL 86 IDA 3.7 RGD PMID:21818327 RGD:5684953 NCBI chr 4:56,647,776...78,882,945 JBrowse link
Q Bmd87 Bone mineral density QTL 87 IDA 5.1 RGD PMID:21818327 RGD:5684953 NCBI chr 4:56,647,776...78,882,945 JBrowse link
Q Bmd92 Bone mineral density QTL 92 IDA 0.01 RGD PMID:27113531 RGD:11353859 NCBI chr 9:46,114,199...91,114,199 JBrowse link
tibia size trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss55 Bone structure and strength QTL 55 IDA 1.0E-4 3.2 RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss56 Bone structure and strength QTL 56 IDA 1.0E-4 2.4 RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss62 Bone structure and strength QTL 62 IDA 1.0E-4 1.5 RGD PMID:19113924 RGD:2312767 NCBI chr10:5,387,014...50,387,014 JBrowse link
Q Bss68 Bone structure and strength QTL 68 IDA 1.0E-4 2.9 RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,481,312...82,174,945 JBrowse link
Q Bss73 Bone structure and strength QTL 73 IDA 1.5 RGD PMID:19113924 RGD:2312767 NCBI chr 3:27,494,621...50,302,886 JBrowse link
Q Bss76 Bone structure and strength QTL 76 IDA 1.0E-4 3.0 RGD PMID:19113924 RGD:2312767 NCBI chr 8:30,848,154...82,460,899 JBrowse link
Q Bss77 Bone structure and strength QTL 77 IDA 1.0E-4 3.1 RGD PMID:19113924 RGD:2312767 NCBI chr 8:30,848,154...82,460,899 JBrowse link
Q Bss79 Bone structure and strength QTL 79 IDA 1.0E-4 1.8 RGD PMID:19113924 RGD:2312767 NCBI chr10:62,057,807...107,057,807 JBrowse link
Q Bss82 Bone structure and strength QTL 82 IDA 1.0E-4 3.0 RGD PMID:19113924 RGD:2312767 NCBI chr14:37,669,719...82,669,719 JBrowse link
Q Bss83 Bone structure and strength QTL 83 IDA 1.0E-4 2.9 RGD PMID:19113924 RGD:2312767 NCBI chr14:37,669,719...82,669,719 JBrowse link
Q Bss88 Bone structure and strength QTL 88 IDA 3.8 RGD PMID:20699128 RGD:4889918
Q Bss89 Bone structure and strength QTL 89 IDA 3.8 RGD PMID:20699128 RGD:4889918 NCBI chr 8:50,095,249...82,460,899 JBrowse link
Q Bss93 Bone structure and strength QTL 93 IDA 4.4 RGD PMID:20699128 RGD:4889918 NCBI chr17:27,027,949...60,463,643 JBrowse link
Q Bss96 Bone structure and strength QTL 96 IDA 4.9 RGD PMID:20699128 RGD:4889918 NCBI chr 4:56,647,776...78,882,945 JBrowse link
Q Bss97 Bone structure and strength QTL 97 IDA 5.6 RGD PMID:20699128 RGD:4889918 NCBI chr 4:56,647,776...78,882,945 JBrowse link
tibia strength trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss101 Bone structure and strength QTL 101 IDA 3.6 RGD PMID:21818327 RGD:5684953 NCBI chr 1:15,431,621...49,361,612 JBrowse link
Q Bss102 Bone structure and strength QTL 102 IDA 7.2E-7 5.5 RGD PMID:21818327 RGD:5684953 NCBI chr 1:15,431,621...49,361,612 JBrowse link
Q Bss103 Bone structure and strength QTL 103 IDA 2.8 RGD PMID:21818327 RGD:5684953 NCBI chr15:14,481,165...28,469,888 JBrowse link
Q Bss57 Bone structure and strength QTL 57 IDA 1.0E-4 3.7 RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss58 Bone structure and strength QTL 58 IDA 1.0E-4 3.7 RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss63 Bone structure and strength QTL 63 IDA 1.0E-4 1.4 RGD PMID:19113924 RGD:2312767 NCBI chr10:5,387,014...50,387,014 JBrowse link
Q Bss64 Bone structure and strength QTL 64 IDA 1.0E-4 1.3 RGD PMID:19113924 RGD:2312767 NCBI chr10:5,387,014...50,387,014 JBrowse link
Q Bss69 Bone structure and strength QTL 69 IDA 1.0E-4 3.5 RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,481,312...82,174,945 JBrowse link
Q Bss70 Bone structure and strength QTL 70 IDA 1.0E-4 3.5 RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,481,312...82,174,945 JBrowse link
Q Bss74 Bone structure and strength QTL 74 IDA 1.0E-4 2.0 RGD PMID:19113924 RGD:2312767 NCBI chr 3:27,494,621...50,302,886 JBrowse link
Q Bss78 Bone structure and strength QTL 78 IDA 1.0E-4 3.5 RGD PMID:19113924 RGD:2312767 NCBI chr 8:30,848,154...82,460,899 JBrowse link
Q Bss80 Bone structure and strength QTL 80 IDA 1.0E-4 2.0 RGD PMID:19113924 RGD:2312767 NCBI chr10:62,057,807...107,057,807 JBrowse link
Q Bss84 Bone structure and strength QTL 84 IDA 1.0E-4 3.1 RGD PMID:19113924 RGD:2312767 NCBI chr14:37,669,719...82,669,719 JBrowse link
Q Bss98 Bone structure and strength QTL 98 IDA 0.0026 3.9 RGD PMID:21818327 RGD:5684953 NCBI chr15:1,058,250...14,481,294 JBrowse link
total fat pad mass term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw175 Body weight QTL 175 IDA 4.1 RGD PMID:25296178 RGD:10402111 NCBI chr 8:75,311,777...84,531,599 JBrowse link
visceral adipose mass term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Abfw1 Abdominal fat weight QTL 1 IDA 0.001 11.7 RGD PMID:25003539 RGD:8694157 NCBI chr 2:182,171,407...227,171,407 JBrowse link
Q Abfw2 Abdominal fat weight QTL 2 IDA 0.001 16.58 RGD PMID:25003539 RGD:8694157 NCBI chr 3:28,249,687...73,249,687 JBrowse link
Q Abfw3 Abdominal fat weight QTL 3 IDA 0.001 16.13 RGD PMID:25003539 RGD:8694157 NCBI chr 5:111,416,838...156,416,838 JBrowse link
Q Abfw4 Abdominal fat weight QTL 4 IDA 0.001 9.07 RGD PMID:25003539 RGD:8694157 NCBI chr 8:71,888,757...116,888,757 JBrowse link
Q Abfw5 Abdominal fat weight QTL 5 IDA 0.001 14.99 RGD PMID:25003539 RGD:8694157
Q Abfw6 Abdominal fat weight QTL 6 IDA 0.001 10.2 RGD PMID:25003539 RGD:8694157 NCBI chr15:1...34,723,002 JBrowse link
Q Abfw7 Abdominal fat weight QTL 7 IDA 0.001 12.22 RGD PMID:25003539 RGD:8694157 NCBI chr16:52,726,464...84,729,064 JBrowse link
Q Abfw8 Abdominal fat weight QTL 8 IDA 0.001 6.38 RGD PMID:25003539 RGD:8694157 NCBI chr18:46,640,675...83,828,827 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  vertebrate trait 2911
    organ system trait 1991
      connective tissue trait 440
        connective tissue development trait + 0
        connective tissue morphology trait + 380
        connective tissue physiology trait + 68
paths to the root