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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:connective tissue physiology trait
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Accession:VT:0010064 term browser browse the term
Definition:Any measurable or observable characteristic related to the function of or processes in the physical or functional supporting tissue of the body, a major constituent of which is an extracellular matrix of ground substance, protein fibers, and structural glycoproteins.


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adipocyte free fatty acid secretion trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gluco5 Glucose level QTL 5 IDA RGD PMID:9171835 RGD:61078 NCBI chr 4:1...33,250,345 JBrowse link
adipocyte glucose uptake trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Gluco11 Glucose level QTL 11 IDA RGD PMID:15752738 RGD:1357415 NCBI chr 4:85,379,421...167,139,601 JBrowse link
Q Gluco12 Glucose level QTL12 IDA RGD PMID:15752738 RGD:1357415 NCBI chr 4:5,218,392...29,593,287 JBrowse link
Q Gluco16 Glucose level QTL 16 IDA RGD PMID:9171835 RGD:61078 NCBI chr 4:1...30,372,989 JBrowse link
Q Gluco17 Glucose level QTL 17 IDA RGD PMID:9171835 RGD:61078
Q Gluco3 Glucose level QTL 3 IDA RGD PMID:9171835 RGD:61078
Q Gluco4 Glucose level QTL 4 IDA RGD PMID:9171835 RGD:61078 NCBI chr 4:1...33,250,345 JBrowse link
femur strength trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd32 Bone mineral density QTL 32 IDA RGD PMID:18282130 RGD:2293456 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bmd33 Bone mineral density QTL 33 IDA RGD PMID:18282130 RGD:2293456 NCBI chr10:49,444,551...81,709,989 JBrowse link
Q Bmd34 Bone mineral density QTL 34 IDA RGD PMID:18282130 RGD:2293456 NCBI chr 1:224,054,293...243,747,962 JBrowse link
Q Bmd35 Bone mineral density QTL 35 IDA RGD PMID:18282130 RGD:2293456 NCBI chr 4:137,755,016...181,392,681 JBrowse link
Q Bmd36 Bone mineral density QTL 36 IDA RGD PMID:18282130 RGD:2293456 NCBI chr15:33,611,058...71,477,291 JBrowse link
Q Bmd37 Bone mineral density QTL 37 IDA RGD PMID:18282130 RGD:2293456 NCBI chr15:33,611,058...71,477,291 JBrowse link
Q Bmd39 Bone mineral density QTL 39 IDA RGD PMID:18282130 RGD:2293456 NCBI chr 8:54,043,744...98,968,765 JBrowse link
Q Bmd89 Bone mineral density QTL 89 IDA RGD PMID:18282130 RGD:2293456 NCBI chr 2:88,862,519...133,862,519 JBrowse link
Q Bss1 Bone structure and strength QTL 1 IDA RGD PMID:16059631 RGD:1549683 NCBI chr 1:172,609,619...217,609,619 JBrowse link
Q Bss105 Bone structure and strength QTL 105 IDA RGD PMID:16059631 RGD:1549683 NCBI chr 4:109,827,074...154,827,074 JBrowse link
Q Bss106 Bone structure and strength QTL 106 IDA RGD PMID:16059631 RGD:1549683 NCBI chr 5:106,906,205...151,906,205 JBrowse link
Q Bss107 Bone structure and strength QTL 107 IDA RGD PMID:16059631 RGD:1549683 NCBI chr 2:211,744,537...249,053,267 JBrowse link
Q Bss108 Bone structure and strength QTL 108 IDA RGD PMID:16059631 RGD:1549683 NCBI chr 2:211,744,537...249,053,267 JBrowse link
Q Bss109 Bone structure and strength QTL 109 IDA RGD PMID:16059631 RGD:1549683 NCBI chr 5:106,906,205...151,906,205 JBrowse link
Q Bss110 Bone structure and strength QTL 1 IDA RGD PMID:16059631 RGD:1549683 NCBI chr 5:106,906,205...151,906,205 JBrowse link
Q Bss114 Bone structure and strength QTL 114 IDA RGD PMID:26297441 RGD:11528619 NCBI chr 5:124,399,325...126,768,268 JBrowse link
Q Bss117 Bone structure and strength QTL 117 IDA RGD PMID:26297441 RGD:11528619 NCBI chr10:44,947,163...45,433,933 JBrowse link
Q Bss118 Bone structure and strength QTL 118 IDA RGD PMID:26297441 RGD:11528619 NCBI chr11:40,638,763...43,376,331 JBrowse link
Q Bss13 Bone structure and strength QTL 13 IDA RGD PMID:16461031 RGD:1578307 NCBI chr 4:60,220,938...105,220,938 JBrowse link
Q Bss2 Bone structure and strength QTL 2 IDA RGD PMID:16059631 RGD:1549683 NCBI chr 2:211,744,537...249,053,267 JBrowse link
Q Bss30 Bone structure and strength QTL 30 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bss31 Bone structure and strength QTL 31 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 6:1...42,487,980 JBrowse link
Q Bss32 Bone structure and strength QTL 32 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bss33 Bone structure and strength QTL 33 IDA RGD PMID:18158281 RGD:2293455 NCBI chr10:69,738,412...107,211,142 JBrowse link
Q Bss34 Bone structure and strength QTL 34 IDA RGD PMID:18158281 RGD:2293455 NCBI chr13:65,103,704...106,807,694 JBrowse link
Q Bss35 Bone structure and strength QTL 35 IDA RGD PMID:18158281 RGD:2293455 NCBI chr18:28,964,853...73,964,853 JBrowse link
Q Bss36 Bone structure and strength QTL 36 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 1:201,554,356...246,554,356 JBrowse link
Q Bss37 Bone structure and strength QTL 37 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 5:120,740,824...151,018,848 JBrowse link
Q Bss38 Bone structure and strength QTL 38 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 1:201,554,356...246,554,356 JBrowse link
Q Bss39 Bone structure and strength QTL 39 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 1:201,554,356...246,554,356 JBrowse link
Q Bss4 Bone structure and strength QTL 4 IDA RGD PMID:16059631 RGD:1549683 NCBI chr 5:106,906,205...151,906,205 JBrowse link
Q Bss40 Bone structure and strength QTL 40 IDA RGD PMID:18158281 RGD:2293455 NCBI chr10:1...35,225,947 JBrowse link
Q Bss5 Bone structure and strength QTL 5 IDA RGD PMID:16059631 RGD:1549683 NCBI chr 7:24,751,841...69,751,841 JBrowse link
Q Bss7 Bone structure and strength QTL 7 IDA RGD PMID:16059631 RGD:1549683 NCBI chr15:75,788,062...101,769,107 JBrowse link
lumbar vertebra strength trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss6 Bone structure and strength QTL 6 IDA RGD PMID:16059631 RGD:1549683 NCBI chr10:57,576,521...102,576,521 JBrowse link
Q Bss8 Bone structure and strength QTL 8 IDA RGD PMID:16059631 RGD:1549683 NCBI chr19:1...31,963,836 JBrowse link
tibia strength trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss101 Bone structure and strength QTL 101 IDA RGD PMID:21818327 RGD:5684953 NCBI chr 1:15,431,621...49,361,612 JBrowse link
Q Bss102 Bone structure and strength QTL 102 IDA RGD PMID:21818327 RGD:5684953 NCBI chr 1:15,431,621...49,361,612 JBrowse link
Q Bss103 Bone structure and strength QTL 103 IDA RGD PMID:21818327 RGD:5684953 NCBI chr15:14,481,165...28,469,888 JBrowse link
Q Bss57 Bone structure and strength QTL 57 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss58 Bone structure and strength QTL 58 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:43,284,731...118,944,897 JBrowse link
Q Bss63 Bone structure and strength QTL 63 IDA RGD PMID:19113924 RGD:2312767 NCBI chr10:5,387,014...50,387,014 JBrowse link
Q Bss64 Bone structure and strength QTL 64 IDA RGD PMID:19113924 RGD:2312767 NCBI chr10:5,387,014...50,387,014 JBrowse link
Q Bss69 Bone structure and strength QTL 69 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,481,312...82,174,945 JBrowse link
Q Bss70 Bone structure and strength QTL 70 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 1:11,481,312...82,174,945 JBrowse link
Q Bss74 Bone structure and strength QTL 74 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 3:27,494,621...50,302,886 JBrowse link
Q Bss78 Bone structure and strength QTL 78 IDA RGD PMID:19113924 RGD:2312767 NCBI chr 8:30,848,154...82,460,899 JBrowse link
Q Bss80 Bone structure and strength QTL 80 IDA RGD PMID:19113924 RGD:2312767 NCBI chr10:62,057,807...107,057,807 JBrowse link
Q Bss84 Bone structure and strength QTL 84 IDA RGD PMID:19113924 RGD:2312767 NCBI chr14:37,669,719...82,669,719 JBrowse link
Q Bss98 Bone structure and strength QTL 98 IDA RGD PMID:21818327 RGD:5684953 NCBI chr15:1,058,250...14,481,294 JBrowse link
Term paths to the root
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Term Annotations click to browse term
  vertebrate trait 2911
    organ system trait 1991
      connective tissue trait 440
        connective tissue physiology trait 68
          adipose physiology trait + 11
          bone physiology trait + 57
          synovial blood flow trait 0
          tendon physiology trait 0
paths to the root