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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:cardiovascular system morphology trait
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Accession:VT:0002127 term browser browse the term
Definition:Any measurable or observable characteristic related to the shape, structure, color or pattern of the heart or blood vessels.
Synonyms:xref: MP:0002127



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aorta elastic tissue integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vetf1 Vascular elastic tissue fragility QTL 1 IDA RGD PMID:11526202 RGD:619605 NCBI chr 5:2,282,226...5,904,428 JBrowse link
Q Vetf2 Vascular elastic tissue fragility QTL 2 IDA RGD PMID:11526202 RGD:619605 NCBI chr10:41,142,633...86,142,633 JBrowse link
aorta elastin amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Ael1 Aortic elastin QTL 1 IDA RGD PMID:15668357 RGD:1334448 NCBI chr 2:19,076,825...64,076,825 JBrowse link
Q Ael2 Aortic elastin QTL 2 IDA RGD PMID:15668357 RGD:1334448
Q Ael3 Aortic elastin QTL 3 IDA RGD PMID:15668357 RGD:1334448 NCBI chr14:8,267,090...53,267,090 JBrowse link
Q Vetf7 Vascular elastic tissue fragility QTL 7 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 2:81,689,826...221,035,911 JBrowse link
artery integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vetf10 Vascular elastic tissue fragility QTL 10 IDA RGD PMID:17356016 RGD:8662443 NCBI chr10:6,154,182...73,453,136 JBrowse link
Q Vetf3 Vascular elastic tissue fragility QTL 3 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 5:2,282,226...69,540,447 JBrowse link
Q Vetf5 Vascular elastic tissue fragility QTL 5 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 8:28,242,912...99,525,068 JBrowse link
Q Vetf6 Vascular elastic tissue fragility QTL 6 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 9:36,962,359...92,058,970 JBrowse link
artery morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vnigr1 Vascular neointimal growth QTL 1 IDA RGD PMID:16434542 RGD:1578306 NCBI chr 3:149,040,888...168,026,850 JBrowse link
Q Vnigr2 Vascular neointimal growth QTL 2 IDA RGD PMID:16434542 RGD:1578306 NCBI chr 3:130,656,562...169,034,231 JBrowse link
Q Vnigr3 Vascular neointimal growth QTL 3 IDA RGD PMID:16434542 RGD:1578306 NCBI chr 3:130,656,562...169,034,231 JBrowse link
blood vessel smooth muscle cell quantity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Smcn1 Smooth muscle cell number QTL 1 IDA RGD PMID:15741507 RGD:1357419 NCBI chr 2:59,134,147...127,460,910 JBrowse link
kidney blood vessel morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rends2 Renal damage susceptibility QTL 2 IDA RGD PMID:12874092 RGD:631854 NCBI chr 1:19,333,571...56,983,283 JBrowse link
Q Rends3 Renal damage susceptibility QTL 3 IDA RGD PMID:12874092 RGD:631854 NCBI chr10:79,813,789...85,160,854 JBrowse link
Q Rends4 Renal damage susceptibility QTL 4 IDA RGD PMID:12874092 RGD:631854 NCBI chr16:1...26,727,669 JBrowse link
renal artery integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vetf4 Vascular elastic tissue fragility QTL 4 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 3:59,242,096...157,323,038 JBrowse link
thoracic aorta cellular protein amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Aocep1 Aortic cell protein QTL 1 IDA RGD PMID:15668357 RGD:1334448 NCBI chr17:40,990,005...85,990,005 JBrowse link
thoracic aorta molecular composition trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vetf8 Vascular elastic tissue fragility QTL 8 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 2:104,559,726...149,559,726 JBrowse link
Q Vetf9 Vascular elastic tissue fragility QTL 9 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 2:157,142,078...226,277,316 JBrowse link

Term paths to the root
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Term Annotations click to browse term
  vertebrate trait 1523
    organ system trait 872
      circulatory system trait 59
        circulatory system morphology trait 21
          cardiovascular system morphology trait 21
            blood vessel morphology trait + 21
            heart morphology trait + 131
            outflow tract morphology trait + 0
paths to the root