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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:axial skeleton morphology trait
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Accession:VT:0002114 term browser browse the term
Definition:Any measurable or observable characteristic related to the shape, structure, color, or pattern of the craniofacial, vertebral, rib, or sternal bones.
Comment:pslim term
Synonyms:xref: MP:0002114


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lumbar vertebra area term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd2 Bone mineral density QTL 2 IDA RGD PMID:16180139 RGD:1553896 NCBI chr 2:114,837,675...212,549,332 JBrowse link
Q Bss119 Bone structure and strength QTL 119 IDA RGD PMID:26297441 RGD:11528619
lumbar vertebra mineral mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bmd4 Bone mineral density QTL 4 IDA RGD PMID:16180139 RGD:1553896 NCBI chr10:19,816,042...99,406,971 JBrowse link
Q Bmd42 Bone mineral density QTL 42 IDA RGD PMID:18707222 RGD:2300109 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bmd44 Bone mineral density QTL 44 IDA RGD PMID:18707222 RGD:2300109 NCBI chr 1:56,949,932...101,949,932 JBrowse link
Q Bmd45 Bone mineral density QTL 45 IDA RGD PMID:18707222 RGD:2300109 NCBI chr 2:88,862,519...133,862,519 JBrowse link
Q Bmd49 Bone mineral density QTL 49 IDA RGD PMID:18707222 RGD:2300109 NCBI chr 2:88,862,519...133,862,519 JBrowse link
Q Bmd5 Bone mineral density QTL 5 IDA RGD PMID:16180139 RGD:1553896
Q Bmd53 Bone mineral density QTL 53 IDA RGD PMID:18707222 RGD:2300109
Q Bmd58 Bone mineral density QTL 58 IDA RGD PMID:18707222 RGD:2300109 NCBI chr10:26,944,628...71,944,628 JBrowse link
Q Bmd59 Bone mineral density QTL 59 IDA RGD PMID:18707222 RGD:2300109 NCBI chr12:10,474,137...46,669,029 JBrowse link
Q Bmd62 Bone mineral density QTL 62 IDA RGD PMID:18707222 RGD:2300109 NCBI chr15:11,111,142...56,111,142 JBrowse link
Q Bmd64 Bone mineral density QTL 64 IDA RGD PMID:18707222 RGD:2300109 NCBI chr16:37,752,156...82,752,156 JBrowse link
Q Bmd66 Bone mineral density QTL 66 IDA RGD PMID:18707222 RGD:2300109 NCBI chr18:28,964,853...73,964,853 JBrowse link
lumbar vertebra morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss44 Bone structure and strength QTL 44 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 2:43,162,366...148,478,373 JBrowse link
Q Bss45 Bone structure and strength QTL 45 IDA RGD PMID:18158281 RGD:2293455 NCBI chr16:37,752,156...82,752,156 JBrowse link
Q Bss46 Bone structure and strength QTL 46 IDA RGD PMID:18158281 RGD:2293455 NCBI chr18:11,791,518...63,636,873 JBrowse link
lumbar vertebra size trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss41 Bone structure and strength QTL 41 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bss42 Bone structure and strength QTL 42 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 7:47,651,439...92,651,439 JBrowse link
Q Bss43 Bone structure and strength QTL 43 IDA RGD PMID:18158281 RGD:2293455 NCBI chr10:59,209,888...104,209,888 JBrowse link
Q Bss47 Bone structure and strength QTL 47 IDA RGD PMID:18158281 RGD:2293455 NCBI chr 1:171,629,477...216,629,477 JBrowse link
Q Bss48 Bone structure and strength QTL 48 IDA RGD PMID:18158281 RGD:2293455
Q Bss49 Bone structure and strength QTL 49 IDA RGD PMID:18158281 RGD:2293455 NCBI chr12:10,474,137...46,669,029 JBrowse link
Q Bss50 Bone structure and strength QTL 50 IDA RGD PMID:18158281 RGD:2293455 NCBI chr18:1...34,291,613 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  vertebrate trait 2911
    organ system trait 1991
      connective tissue trait 440
        connective tissue morphology trait 380
          bone morphology trait 177
            axial skeleton morphology trait 29
              auditory ossicle morphology trait + 0
              axial skeleton cell quantity 0
              craniofacial bone morphology trait + 0
              thoracic cage morphology trait + 0
              vertebral column morphology trait + 29
paths to the root