Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:blood vessel morphology trait
go back to main search page
Accession:VT:0001614 term browser browse the term
Definition:Any measurable or observable characteristic related to the shape, structure, color or pattern of the tubular channels through which the blood circulates.
Synonyms:related_synonym: vascular morphology trait


show annotations for term's descendants           Sort by:
aorta elastic tissue integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vetf1 Vascular elastic tissue fragility QTL 1 IDA RGD PMID:11526202 RGD:619605 NCBI chr 5:2,282,226...5,904,428 JBrowse link
Q Vetf2 Vascular elastic tissue fragility QTL 2 IDA RGD PMID:11526202 RGD:619605 NCBI chr10:41,142,633...86,142,633 JBrowse link
aorta elastin amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Ael1 Aortic elastin QTL 1 IDA RGD PMID:15668357 RGD:1334448 NCBI chr 2:19,076,825...64,076,825 JBrowse link
Q Ael2 Aortic elastin QTL 2 IDA RGD PMID:15668357 RGD:1334448
Q Ael3 Aortic elastin QTL 3 IDA RGD PMID:15668357 RGD:1334448 NCBI chr14:8,267,090...53,267,090 JBrowse link
Q Vetf7 Vascular elastic tissue fragility QTL 7 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 2:81,689,826...221,035,911 JBrowse link
aorta mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Am1 Aortic mass QTL 1 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:137,219,876...142,323,610 JBrowse link
Q Am10 Aortic mass QTL 10 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:74,372,084...84,007,272 JBrowse link
Q Am11 Aortic mass QTL 11 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:84,007,272...95,933,025 JBrowse link
Q Am12 Aortic mass QTL 12 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:66,319,447...68,164,786 JBrowse link
Q Am13 Aortic mass QTL 13 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:90,404,397...107,211,142 JBrowse link
Q Am14 Aortic mass QTL 14 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:71,115,217...72,606,468 JBrowse link
Q Am15 Aortic mass QTL 15 IDA RGD PMID:17143582 RGD:1599557 NCBI chr10:66,319,447...67,750,281 JBrowse link
Q Am16 Aortic mass QTL 16 IDA RGD PMID:17143582 RGD:1599557 NCBI chr16:832,380...2,995,225 JBrowse link
Q Am17 Aortic mass QTL 17 IDA RGD PMID:17143582 RGD:1599557 NCBI chr17:23,653,184...68,653,184 JBrowse link
Q Am18 Aortic mass QTL 18 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:52,539,763...76,104,388 JBrowse link
Q Am19 Aortic mass QTL 19 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:26,548,082...46,969,551 JBrowse link
Q Am2 Aortic mass QTL 2 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:152,413,072...185,122,374 JBrowse link
Q Am20 Aortic mass QTL 20 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:11,944,273...26,548,295 JBrowse link
Q Am21 Aortic mass QTL 21 IDA RGD PMID:17143582 RGD:1599557 NCBI chr18:6,791,251...12,205,285 JBrowse link
Q Am3 Aortic mass QTL 3 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:142,323,368...146,786,035 JBrowse link
Q Am4 Aortic mass QTL 4 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 2:152,413,072...175,950,118 JBrowse link
Q Am5 Aortic mass QTL 5 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:18,311,454...47,233,430 JBrowse link
Q Am6 Aortic mass QTL 6 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:31,426,403...70,668,733 JBrowse link
Q Am7 Aortic mass QTL 7 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 3:145,925,360...166,177,555 JBrowse link
Q Am8 Aortic mass QTL 8 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 8:43,296,169...98,968,765 JBrowse link
Q Am9 Aortic mass QTL 9 IDA RGD PMID:17143582 RGD:1599557 NCBI chr 8:2,097,640...47,097,640 JBrowse link
Q Cm7 Cardiac mass QTL 7 IDA RGD PMID:12775577 RGD:629621 NCBI chr 1:196,248,093...241,248,093 JBrowse link
Q Cm8 Cardiac mass QTL 8 IDA RGD PMID:12775577 RGD:629621 NCBI chr 3:16,954,708...61,954,708 JBrowse link
Q Cm9 Cardiac mass QTL 9 IDA RGD PMID:12775577 RGD:629621 NCBI chr19:1...28,982,497 JBrowse link
aorta morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Cardf1 Cardiac cell morphology QTL 1 IDA RGD PMID:14532335 RGD:727992 NCBI chr13:11,929,449...45,417,941 JBrowse link
artery integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vetf10 Vascular elastic tissue fragility QTL 10 IDA RGD PMID:17356016 RGD:8662443 NCBI chr10:6,154,182...73,453,136 JBrowse link
Q Vetf3 Vascular elastic tissue fragility QTL 3 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 5:2,282,226...69,540,447 JBrowse link
Q Vetf5 Vascular elastic tissue fragility QTL 5 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 8:28,242,912...99,525,068 JBrowse link
Q Vetf6 Vascular elastic tissue fragility QTL 6 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 9:36,962,359...92,058,970 JBrowse link
artery morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vnigr1 Vascular neointimal growth QTL 1 IDA RGD PMID:16434542 RGD:1578306 NCBI chr 3:149,040,888...168,026,850 JBrowse link
Q Vnigr2 Vascular neointimal growth QTL 2 IDA RGD PMID:16434542 RGD:1578306 NCBI chr 3:130,656,562...169,034,231 JBrowse link
Q Vnigr3 Vascular neointimal growth QTL 3 IDA RGD PMID:16434542 RGD:1578306 NCBI chr 3:130,656,562...169,034,231 JBrowse link
blood vessel smooth muscle cell quantity term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Smcn1 Smooth muscle cell number QTL 1 IDA RGD PMID:15741507 RGD:1357419 NCBI chr 2:59,134,147...127,460,910 JBrowse link
kidney blood vessel morphology trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rends2 Renal damage susceptibility QTL 2 IDA RGD PMID:12874092 RGD:631854 NCBI chr 1:19,333,571...56,983,283 JBrowse link
Q Rends3 Renal damage susceptibility QTL 3 IDA RGD PMID:12874092 RGD:631854 NCBI chr10:79,813,789...85,160,854 JBrowse link
Q Rends4 Renal damage susceptibility QTL 4 IDA RGD PMID:12874092 RGD:631854 NCBI chr16:1...26,727,669 JBrowse link
renal artery integrity trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vetf4 Vascular elastic tissue fragility QTL 4 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 3:59,242,096...157,323,038 JBrowse link
thoracic aorta cellular protein amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Aocep1 Aortic cell protein QTL 1 IDA RGD PMID:15668357 RGD:1334448 NCBI chr17:40,990,005...85,990,005 JBrowse link
thoracic aorta molecular composition trait term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Vetf8 Vascular elastic tissue fragility QTL 8 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 2:104,559,726...149,559,726 JBrowse link
Q Vetf9 Vascular elastic tissue fragility QTL 9 IDA RGD PMID:17356016 RGD:8662443 NCBI chr 2:157,142,078...226,277,316 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  vertebrate trait 2379
    organ system trait 1548
      circulatory system trait 606
        circulatory system morphology trait 177
          cardiovascular system morphology trait 177
            blood vessel morphology trait 46
              arteriole morphology trait + 0
              artery morphology trait + 42
              blood vessel elastic tissue morphology trait + 6
              blood vessel endothelial cell morphology trait + 0
              blood vessel smooth muscle morphology trait + 1
              blood-brain barrier morphology trait 0
              blood-cerebrospinal fluid barrier morphology trait 0
              capillary morphology trait + 0
              cerebrovascular system morphology trait + 0
              choroid blood vessel morphology trait 0
              conjunctival blood vessel morphology trait 0
              kidney blood vessel morphology trait + 3
              lung blood vessel morphology trait + 0
              perivascular macrophage morphology trait 0
              retina blood vessel morphology trait 0
              stria vascularis blood vessel morphology trait 0
              vein morphology trait + 0
paths to the root