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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:telencephalon morphology trait
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Accession:VT:0000787 term browser browse the term
Definition:Any measurable or observable characteristic related to the shape, structure, color, or pattern of the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived.


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cerebrum integrity trait term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp49 Blood pressure QTL 49 IDA 16.6 RGD PMID:9241273 RGD:61056 NCBI chr 5:60,293,434...98,603,051 JBrowse link
Q Strs1 Sensitivity to stroke QTL 1 IDA 7.4 RGD PMID:8696337 RGD:61093 NCBI chr 1:121,767,634...166,767,634 JBrowse link
Q Strs2 Sensitivity to stroke QTL 2 IDA 4.7 RGD PMID:8696337 RGD:61093 NCBI chr 5:135,929,696...166,875,058 JBrowse link
Q Strs3 Sensitivity to stroke QTL 3 IDA 3.0 RGD PMID:8696337 RGD:61093 NCBI chr 4:40,433,388...85,433,388 JBrowse link
Q Strs4 Sensitivity to stroke QTL 4 IDA 8.7 RGD PMID:23690346 RGD:7411685 NCBI chr 1:78,430,536...123,430,536 JBrowse link
Q Strs5 Sensitivity to stroke QTL 5 IDA 9.4 RGD PMID:23690346 RGD:7411685 NCBI chr18:49,999,958...65,845,095 JBrowse link
Q Strs6 Sensitivity to stroke QTL 6 IDA 3.9 RGD PMID:23690346 RGD:7411685 NCBI chr 5:134,972,980...138,113,556 JBrowse link
Q Strs7 Sensitivity to stroke QTL 7 IDA 3.8 RGD PMID:23690346 RGD:7411685 NCBI chr15:40,289,901...49,308,583 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  vertebrate trait 2911
    organ system trait 1991
      nervous/sensory system trait 172
        nervous system morphology trait 150
          brain morphology trait 59
            forebrain morphology trait 41
              telencephalon morphology trait 14
                cerebrum morphology trait + 14
                hippocampus morphology trait + 0
                lateral septum morphology trait + 0
                lateral ventricle morphology trait + 0
                olfactory lobe morphology trait + 0
                striatum morphology trait + 0
                telencephalon cell quantity 0
paths to the root