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VERTEBRATE TRAIT ONTOLOGY - ANNOTATIONS

The Vertebrate Trait Ontology (VT) is being developed as a collaborative effort between the Rat Genome Database at the Medical College of Wisconsin (RGD, http://rgd.mcw.edu), Mouse Genome Informatics at the Jackson Laboratory (http://www.informatics.jax.org/) and the Animal QTL database at Iowa State University (http://www.animalgenome.org/cgi-bin/QTLdb/index). For more information about this vocabulary, or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:adipose morphology trait
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Accession:VT:0000003 term browser browse the term
Definition:Any measurable or observable characteristic related to the shape, structure, color or pattern of the fat-storing cells/tissue.
Synonyms:exact_synonym: fat morphology trait



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abdominal adipose amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw116 Body weight QTL 116 IDA RGD PMID:11071303 RGD:619669 NCBI chr 1:224,054,293...260,122,809 JBrowse link
abdominal fat pad mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw117 Body weight QTL 117 IDA RGD PMID:10373320 RGD:619678 NCBI chr 3:39,454,637...53,296,578 JBrowse link
Q Bw118 Body weight QTL 118 IDA RGD PMID:10373320 RGD:619678 NCBI chr 6:33,309,549...57,730,294 JBrowse link
Q Bw119 Body weight QTL 119 IDA RGD PMID:10373320 RGD:619678 NCBI chr 7:27,828,949...27,829,089 JBrowse link
Q Bw121 Body weight QTL 121 IDA RGD PMID:10373320 RGD:619678 NCBI chr11:1...21,836,709 JBrowse link
epididymal fat pad mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw77 Body weight QTL 77 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 3:53,184,593...64,655,484 JBrowse link
Q Bw78 Body weight QTL 78 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 5:119,085,612...128,034,027 JBrowse link
Q Bw79 Body weight QTL 79 IDA RGD PMID:15728334 RGD:1580752 NCBI chr15:28,030,665...82,262,678 JBrowse link
Q Epfw1 Epididymal fat weight QTL 1 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 3:53,184,593...115,665,732 JBrowse link
Q Epfw10 Epididymal fat weight QTL 10 IDA RGD PMID:25003539 RGD:8694157 NCBI chr11:23,280,456...68,280,456 JBrowse link
Q Epfw11 Epididymal fat weight QTL 11 IDA RGD PMID:25003539 RGD:8694157 NCBI chr14:55,624,247...100,624,247 JBrowse link
Q Epfw12 Epididymal fat weight QTL 12 IDA RGD PMID:25003539 RGD:8694157 NCBI chr18:46,640,675...83,828,827 JBrowse link
Q Epfw2 Epididymal fat weight QTL 2 IDA RGD PMID:15728334 RGD:1580752 NCBI chr 8:31,737,729...76,737,729 JBrowse link
Q Epfw3 Epididymal fat weight QTL 3 IDA RGD PMID:15728334 RGD:1580752 NCBI chr15:28,030,665...82,262,678 JBrowse link
Q Epfw4 Epididymal fat weight QTL 4 IDA RGD PMID:15728334 RGD:1580752 NCBI chr17:9,201,365...23,653,323 JBrowse link
Q Epfw5 Epididymal fat weight QTL 5 IDA RGD PMID:24099777 RGD:8552892 NCBI chr 1:193,113,876...238,113,876 JBrowse link
Q Epfw6 Epididymal fat weight QTL 6 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 2:223,389,739...249,053,267 JBrowse link
Q Epfw7 Epididymal fat weight QTL 7 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 5:49,463,600...94,463,600 JBrowse link
Q Epfw8 Epididymal fat weight QTL 8 IDA RGD PMID:25003539 RGD:8694157
Q Epfw9 Epididymal fat weight QTL 9 IDA RGD PMID:25003539 RGD:8694157 NCBI chr10:44,441,699...89,441,699 JBrowse link
inguinal fat pad mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw62 Body weight QTL62 IDA RGD PMID:11374884 RGD:1357168 NCBI chr 1:22,340,647...67,340,647 JBrowse link
Q Bw94 Body weight QTL 94 IDA RGD PMID:19584880 RGD:2312642 NCBI chr 3:98,535,255...168,026,850 JBrowse link
Q Bw95 Body weight QTL 95 IDA RGD PMID:19584880 RGD:2312642 NCBI chr16:832,236...59,492,508 JBrowse link
intramuscular adipose amount term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw61 Body weight QTL61 IDA RGD PMID:11853145 RGD:619672 NCBI chr 1:173,108,781...218,108,781 JBrowse link
mesenteric fat pad mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw1 Body weight QTL1 IDA RGD PMID:11087657 RGD:619690 NCBI chr 2:43,171,017...83,575,226 JBrowse link
Q Bw3 Body weight QTL3 IDA RGD PMID:11087657 RGD:619690 NCBI chr 8:69,349,194...112,783,834 JBrowse link
retroperitoneal fat pad mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw125 Body weight QTL 125 IEP RGD PMID:20159938 RGD:7365117
Q Bw166 Body weight QTL 166 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 2:182,171,407...227,171,407 JBrowse link
Q Bw167 Body weight QTL 167 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 3:91,797,474...136,797,474 JBrowse link
Q Bw168 Body weight QTL 168 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 4:40,433,414...85,433,414 JBrowse link
Q Bw169 Body weight QTL 169 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 5:111,416,838...156,416,838 JBrowse link
Q Bw170 Body weight QTL 170 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 8:71,888,757...116,888,757 JBrowse link
Q Bw171 Body weight QTL 171 IDA RGD PMID:25003539 RGD:8694157
Q Bw172 Body weight QTL 172 IDA RGD PMID:25003539 RGD:8694157 NCBI chr16:24,325,513...69,325,513 JBrowse link
Q Bw2 Body weight QTL2 IDA RGD PMID:11087657 RGD:619690 NCBI chr 4:9,940,885...44,463,908 JBrowse link
Q Bw4 Body weight QTL4 IDA RGD PMID:11087657 RGD:619690 NCBI chr 9:5,109,826...50,109,826 JBrowse link
Q Bw5 Body weight QTL5 IDA RGD PMID:11087657 RGD:619690 NCBI chr14:11,030,812...30,320,092 JBrowse link
Q Bw60 Body weight QTL60 IDA RGD PMID:11087657 RGD:619690 NCBI chr14:79,950,921...95,876,975 JBrowse link
subcutaneous adipose mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scfw1 Subcutaneous fat weight QTL 1 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 2:182,171,407...227,171,407 JBrowse link
Q Scfw2 Subcutaneous fat weight QTL 2 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 4:1...31,934,116 JBrowse link
Q Scfw3 Subcutaneous fat weight QTL 3 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 6:1...41,223,769 JBrowse link
Q Scfw4 Subcutaneous fat weight QTL 4 IDA RGD PMID:25003539 RGD:8694157
Q Scfw5 Subcutaneous fat weight QTL 5 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 9:1...37,999,212 JBrowse link
Q Scfw6 Subcutaneous fat weight QTL 6 IDA RGD PMID:25003539 RGD:8694157
total fat pad mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw175 Body weight QTL 175 IDA RGD PMID:25296178 RGD:10402111 NCBI chr 8:75,311,777...84,531,599 JBrowse link
visceral adipose mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Abfw1 Abdominal fat weight QTL 1 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 2:182,171,407...227,171,407 JBrowse link
Q Abfw2 Abdominal fat weight QTL 2 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 3:28,249,687...73,249,687 JBrowse link
Q Abfw3 Abdominal fat weight QTL 3 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 5:111,416,838...156,416,838 JBrowse link
Q Abfw4 Abdominal fat weight QTL 4 IDA RGD PMID:25003539 RGD:8694157 NCBI chr 8:71,888,757...116,888,757 JBrowse link
Q Abfw5 Abdominal fat weight QTL 5 IDA RGD PMID:25003539 RGD:8694157
Q Abfw6 Abdominal fat weight QTL 6 IDA RGD PMID:25003539 RGD:8694157 NCBI chr15:1...34,723,002 JBrowse link
Q Abfw7 Abdominal fat weight QTL 7 IDA RGD PMID:25003539 RGD:8694157 NCBI chr16:52,726,464...84,729,064 JBrowse link
Q Abfw8 Abdominal fat weight QTL 8 IDA RGD PMID:25003539 RGD:8694157 NCBI chr18:46,640,675...83,828,827 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  vertebrate trait 2384
    organ system trait 1553
      connective tissue trait 366
        connective tissue morphology trait 309
          adipose morphology trait 53
            adipocyte morphology trait + 0
            adipose amount + 16
            adipose distribution trait 0
            adipose molecular composition trait + 0
            brown adipose morphology trait + 0
            fat pad morphology trait + 37
            white adipose morphology trait + 16
paths to the root