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RAT STRAINS - ANNOTATIONS

The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:HRDP HXB/BXH Recombinant Inbred strain
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Accession:RS:0005366 term browser browse the term


show annotations for term's descendants           Sort by:
BXH/Ipcv term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Alc24 Alcohol consumption QTL 24 IEA 0.74 2.3 RGD PMID:24961585 RGD:8663441 NCBI chr 1:159,863,716...177,663,210 JBrowse link
Q Alc25 Alcohol consumption QTL 25 IEA 0.28 3.0 RGD PMID:24961585 RGD:8663441 NCBI chr 1:217,412,367...238,041,033 JBrowse link
Q Alc26 Alcohol consumption QTL 26 IEA 0.667 2.4 RGD PMID:24961585 RGD:8663441 NCBI chr 2:223,810,546...243,965,570 JBrowse link
Q Alc27 Alcohol consumption QTL 27 IEA 0.791 2.2 RGD PMID:24961585 RGD:8663441 NCBI chr 6:40,052,411...56,848,866 JBrowse link
Q Alc28 Alcohol consumption QTL 28 IEA 0.439 2.7 RGD PMID:24961585 RGD:8663441 NCBI chr12:28,717,718...50,386,405 JBrowse link
Q Alc29 Alcohol consumption QTL 29 IEA 0.258 2.7 RGD PMID:24961585 RGD:8663441 NCBI chr 1:217,412,367...243,666,627 JBrowse link
Q Alc30 Alcohol consumption QTL 30 IEA 0.739 2.0 RGD PMID:24961585 RGD:8663441 NCBI chr 3:30,832,384...44,921,701 JBrowse link
Q Alc31 Alcohol consumption QTL 31 IEA 0.038 3.7 RGD PMID:24961585 RGD:8663441 NCBI chr 6:23,284,664...29,732,046 JBrowse link
Q Alc32 Alcohol consumption QTL 32 IEA 0.755 2.0 RGD PMID:24961585 RGD:8663441 NCBI chr 8:97,492,344...116,428,905 JBrowse link
Q Alc33 Alcohol consumption QTL 33 IEA 0.68 2.1 RGD PMID:24961585 RGD:8663441 NCBI chr12:28,717,718...49,212,240 JBrowse link
Q Alc34 Alcohol consumption QTL 34 IEA 0.611 2.2 RGD PMID:24961585 RGD:8663441 NCBI chr 1:217,412,367...238,041,033 JBrowse link
Q Alc35 Alcohol consumption QTL 35 IEA 0.606 2.2 RGD PMID:24961585 RGD:8663441 NCBI chr 6:13,717,169...27,053,860 JBrowse link
Q Alc36 Alcohol consumption QTL 36 IEA 0.592 2.0 RGD PMID:24961585 RGD:8663441 NCBI chr 2:219,814,164...239,320,906 JBrowse link
Q Alc37 Alcohol consumption QTL 37 IEA 0.224 2.6 RGD PMID:24961585 RGD:8663441 NCBI chr 6:13,717,169...27,053,860 JBrowse link
Q Bp144 Blood pressure QTL 144 IEA 0.001 RGD PMID:8938440 RGD:619638 NCBI chr20:1...3,629,303 JBrowse link
Q Bp271 Blood pressure QTL 271 IEA 1.8 RGD PMID:11882571 RGD:625381 NCBI chr 8:34,125,902...55,607,752 JBrowse link
Q Bp272 Blood pressure QTL 272 IEA 2.5 RGD PMID:11882571 RGD:625381 NCBI chr 6:22,288,257...32,981,219 JBrowse link
Q Bp32 Blood pressure QTL 32 IEA 0.012 RGD PMID:7560090 RGD:61044
Q Bp33 Blood pressure QTL 33 IEA 0.0018 RGD PMID:7560090 RGD:61044 NCBI chr 4:1...28,392,287 JBrowse link
Q Fetw1 Fetal weight QTL 1 IEA 0.005 12.1 RGD PMID:16914718 RGD:2300320 NCBI chr 1:92,963,855...109,494,029 JBrowse link
Q Hpcl1 Hepatic cholesterol level QTL 1 IEA 3.3 RGD PMID:9600105 RGD:629576 NCBI chr10:35,893,263...52,293,000 JBrowse link
Q Hrtrt19 Heart rate QTL 19 IEA 2.9 RGD PMID:11882571 RGD:625381 NCBI chr 2:221,270,493...228,950,743 JBrowse link
Q Hrtrt20 Heart rate QTL 20 IEA 3.08 RGD PMID:11882571 RGD:625381 NCBI chr 1:194,786,607...207,590,403 JBrowse link
Q Hrtrt21 Heart rate QTL 21 IEA 2.4 RGD PMID:11882571 RGD:625381 NCBI chr10:73,695,339...97,272,278 JBrowse link
Q Plaw1 Placental weight QTL 1 IEA 0.005 15.0 RGD PMID:16914718 RGD:2300320 NCBI chr15:74,735,564...106,469,153 JBrowse link
Q Sach6 Saccharin preference QTL 6 IEA 4.9 RGD PMID:11958542 RGD:631221 NCBI chr 2:114,384,617...215,381,366 JBrowse link
Q Sach7 Saccharin preference QTL 7 IEA RGD PMID:11958542 RGD:631221 NCBI chr 4:58,079,875...82,597,589 JBrowse link
BXH2/Cub term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw175 Body weight QTL 175 IEA 4.1 RGD PMID:25296178 RGD:10402111 NCBI chr 8:84,192,326...129,192,326 JBrowse link
Q Kidm55 Kidney mass QTL 55 IEA 4.9 RGD PMID:25296178 RGD:10402111 NCBI chr 7:72,725,037...117,725,037 JBrowse link
Q Livw4 Liver weight QTL 4 IEA 3.8 RGD PMID:25296178 RGD:10402111 NCBI chr 7:72,725,037...117,725,037 JBrowse link
Q Scl69 Serum cholesterol level QTL 69 IEA 0.001 6.3 RGD PMID:25296178 RGD:10402111
Q Scl70 Serum cholesterol level QTL 70 IEA 0.001 4.7 RGD PMID:25296178 RGD:10402111
Q Scl71 Serum cholesterol level QTL 71 IEA 0.001 5.8 RGD PMID:25296178 RGD:10402111 NCBI chr 3:2,904,329...47,904,329 JBrowse link
Q Scl72 Serum cholesterol level QTL 72 IEA 0.001 4.4 RGD PMID:25296178 RGD:10402111 NCBI chr 3:2,904,329...47,904,329 JBrowse link
Q Scl73 Serum cholesterol level QTL 73 IEA 0.001 4.7 RGD PMID:25296178 RGD:10402111 NCBI chr 3:2,904,329...47,904,329 JBrowse link
Q Scl74 Serum cholesterol level QTL 74 IEA 0.001 5.8 RGD PMID:25296178 RGD:10402111 NCBI chr 3:58,601,291...71,157,804 JBrowse link
Q Scl75 Serum cholesterol level QTL 75 IEA 0.001 4.4 RGD PMID:25296178 RGD:10402111 NCBI chr 3:58,601,291...71,157,804 JBrowse link
Q Scl76 Serum cholesterol level QTL 76 IEA 0.01 3.6 RGD PMID:25296178 RGD:10402111 NCBI chr 4:50,143,926...58,080,146 JBrowse link
Q Scl77 Serum cholesterol level QTL 77 IEA 0.01 4.1 RGD PMID:25296178 RGD:10402111 NCBI chr 4:50,143,926...58,080,146 JBrowse link
Q Scl78 Serum cholesterol level QTL 78 IEA 0.01 3.7 RGD PMID:25296178 RGD:10402111 NCBI chr 4:50,143,926...58,080,146 JBrowse link
Q Scl79 Serum cholesterol level QTL 79 IEA 0.001 3.5 RGD PMID:25296178 RGD:10402111
Q Scl80 Serum cholesterol level QTL 80 IEA 0.01 4.7 RGD PMID:25296178 RGD:10402111 NCBI chr11:90,461,781...96,556,255 JBrowse link
Q Stl33 Serum triglyceride level QTL 33 IEA 0.05 3.4 RGD PMID:25296178 RGD:10402111 NCBI chr 3:58,601,291...71,157,804 JBrowse link
Q Stl34 Serum triglyceride level QTL 34 IEA 0.05 3.5 RGD PMID:25296178 RGD:10402111
HXB-1-43/Ipcv term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Hcuc1 Hepatic copper content QTL 1 IEA 3.0 RGD PMID:11741328 RGD:619607
Q Hcuc2 Hepatic copper content QTL 2 IEA 2.8 RGD PMID:11741328 RGD:619607
Q Hpcl1 Hepatic cholesterol level QTL 1 IEA 3.3 RGD PMID:9600105 RGD:629576 NCBI chr10:35,893,263...52,293,000 JBrowse link
HXB/Ipcv term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Alc24 Alcohol consumption QTL 24 IEA 0.74 2.3 RGD PMID:24961585 RGD:8663441 NCBI chr 1:159,863,716...177,663,210 JBrowse link
Q Alc25 Alcohol consumption QTL 25 IEA 0.28 3.0 RGD PMID:24961585 RGD:8663441 NCBI chr 1:217,412,367...238,041,033 JBrowse link
Q Alc26 Alcohol consumption QTL 26 IEA 0.667 2.4 RGD PMID:24961585 RGD:8663441 NCBI chr 2:223,810,546...243,965,570 JBrowse link
Q Alc27 Alcohol consumption QTL 27 IEA 0.791 2.2 RGD PMID:24961585 RGD:8663441 NCBI chr 6:40,052,411...56,848,866 JBrowse link
Q Alc28 Alcohol consumption QTL 28 IEA 0.439 2.7 RGD PMID:24961585 RGD:8663441 NCBI chr12:28,717,718...50,386,405 JBrowse link
Q Alc29 Alcohol consumption QTL 29 IEA 0.258 2.7 RGD PMID:24961585 RGD:8663441 NCBI chr 1:217,412,367...243,666,627 JBrowse link
Q Alc30 Alcohol consumption QTL 30 IEA 0.739 2.0 RGD PMID:24961585 RGD:8663441 NCBI chr 3:30,832,384...44,921,701 JBrowse link
Q Alc31 Alcohol consumption QTL 31 IEA 0.038 3.7 RGD PMID:24961585 RGD:8663441 NCBI chr 6:23,284,664...29,732,046 JBrowse link
Q Alc32 Alcohol consumption QTL 32 IEA 0.755 2.0 RGD PMID:24961585 RGD:8663441 NCBI chr 8:97,492,344...116,428,905 JBrowse link
Q Alc33 Alcohol consumption QTL 33 IEA 0.68 2.1 RGD PMID:24961585 RGD:8663441 NCBI chr12:28,717,718...49,212,240 JBrowse link
Q Alc34 Alcohol consumption QTL 34 IEA 0.611 2.2 RGD PMID:24961585 RGD:8663441 NCBI chr 1:217,412,367...238,041,033 JBrowse link
Q Alc35 Alcohol consumption QTL 35 IEA 0.606 2.2 RGD PMID:24961585 RGD:8663441 NCBI chr 6:13,717,169...27,053,860 JBrowse link
Q Alc36 Alcohol consumption QTL 36 IEA 0.592 2.0 RGD PMID:24961585 RGD:8663441 NCBI chr 2:219,814,164...239,320,906 JBrowse link
Q Alc37 Alcohol consumption QTL 37 IEA 0.224 2.6 RGD PMID:24961585 RGD:8663441 NCBI chr 6:13,717,169...27,053,860 JBrowse link
Q Bp271 Blood pressure QTL 271 IEA 1.8 RGD PMID:11882571 RGD:625381 NCBI chr 8:34,125,902...55,607,752 JBrowse link
Q Bp272 Blood pressure QTL 272 IEA 2.5 RGD PMID:11882571 RGD:625381 NCBI chr 6:22,288,257...32,981,219 JBrowse link
Q Bp32 Blood pressure QTL 32 IEA 0.012 RGD PMID:7560090 RGD:61044
Q Bp33 Blood pressure QTL 33 IEA 0.0018 RGD PMID:7560090 RGD:61044 NCBI chr 4:1...28,392,287 JBrowse link
Q Fetw1 Fetal weight QTL 1 IEA 0.005 12.1 RGD PMID:16914718 RGD:2300320 NCBI chr 1:92,963,855...109,494,029 JBrowse link
Q Hrtrt19 Heart rate QTL 19 IEA 2.9 RGD PMID:11882571 RGD:625381 NCBI chr 2:221,270,493...228,950,743 JBrowse link
Q Hrtrt20 Heart rate QTL 20 IEA 3.08 RGD PMID:11882571 RGD:625381 NCBI chr 1:194,786,607...207,590,403 JBrowse link
Q Hrtrt21 Heart rate QTL 21 IEA 2.4 RGD PMID:11882571 RGD:625381 NCBI chr10:73,695,339...97,272,278 JBrowse link
Q Plaw1 Placental weight QTL 1 IEA 0.005 15.0 RGD PMID:16914718 RGD:2300320 NCBI chr15:74,735,564...106,469,153 JBrowse link
Q Sach6 Saccharin preference QTL 6 IEA 4.9 RGD PMID:11958542 RGD:631221 NCBI chr 2:114,384,617...215,381,366 JBrowse link
Q Sach7 Saccharin preference QTL 7 IEA RGD PMID:11958542 RGD:631221 NCBI chr 4:58,079,875...82,597,589 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  rat strain 6848
    HRDP strain 2376
      HRDP HXB/BXH Recombinant Inbred strain 123
        BXH/Ipcv + 69
        HXB/Ipcv + 80
paths to the root