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RAT STRAINS - ANNOTATIONS

The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:SD (TALEN) mutants
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Accession:RS:0004523 term browser browse the term
Definition:SD rat strains carrying mutated alleles induced by TALEN system.



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SD-Abcc8em1Cgen term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Abcc8em1Cgen IEA RGD NCBI chr 1:96,598,568...96,679,563 JBrowse link
SD-Apoa4em1Bcgen term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Apoa4em1Bcgen IEA RGD NCBI chr 8:46,539,083...46,541,464 JBrowse link
SD-Apoeem1Ejt term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Apoeem1Ejt IEA RGD NCBI chr 1:79,353,924...79,357,852 JBrowse link
SD-Aqp4em1Hrt term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Aqp4em1Hrt IEA RGD NCBI chr18:6,507,903...6,524,558 JBrowse link
SD-Dmdem1Ang term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Dmdem1Ang IEA RGD NCBI chr  X:48,090,661...48,090,671 JBrowse link
SD-Fahem3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Fahem3Mcwi IEA RGD NCBI chr 1:138,548,830...138,571,599 JBrowse link
SD-Il2rgem1-/y/Mlit term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Il2rgem1-/y/Mlit IEA RGD
SD-Il2rgem1Ang term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Il2rgem1Ang IEA RGD NCBI chr  X:66,398,441...66,398,520 JBrowse link
SD-Il2rgem2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Il2rgem2Mcwi IEA RGD NCBI chr  X:66,398,582...66,398,582 JBrowse link
SD-Il2rgem3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Il2rgem3Mcwi IEA RGD NCBI chr  X:66,395,330...66,399,026 JBrowse link
SD-Lamp2em1 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Lamp2em1 IEA RGD NCBI chr  X:117,173,097...117,222,090 JBrowse link
SD-Leprem1 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Leprem1 IEA RGD NCBI chr 5:116,294,409...116,477,904 JBrowse link
SD-Leprem2 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Leprem2 IEA RGD NCBI chr 5:116,372,431...116,372,431 JBrowse link
SD-Leprem3 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Leprem3 IEA RGD NCBI chr 5:116,294,409...116,477,904 JBrowse link
SD-Mmp12em1Soar term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Mmp12em1Soar IEA RGD NCBI chr 8:4,582,695...4,583,358 JBrowse link
SD-Mmp12em2Soar term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Mmp12em2Soar IEA RGD NCBI chr 8:4,582,897...4,583,503 JBrowse link
SD-Muc1em1Cgen term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Muc1em1Cgen IEA RGD NCBI chr 2:174,635,989...174,640,738 JBrowse link
SD-Nfe2l2em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nfe2l2em1Mcwi IEA RGD NCBI chr 3:60,621,570...60,621,610 JBrowse link
SD-Nfe2l2em1Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nfe2l2em1Mcwi+/+ SD-Nfe2l2em1Mcwi+/Nfe2l2em1Mcwi+ IEA RGD
SD-Nfe2l2em1Mcwi+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nfe2l2em1Mcwi+/- SD-Nfe2l2em1Mcwi+/Nfe2l2em1Mcwi- IEA RGD
SD-Nfe2l2em1Mcwi-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nfe2l2em1Mcwi-/- SD-Nfe2l2em1Mcwi-/Nfe2l2em1Mcwi- IEA RGD NCBI chr 3:60,621,570...60,621,610 JBrowse link
SD-Nkx3-1em1Pjhak+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nkx3-1em1Pjhak+/- IEA RGD NCBI chr15:44,473,851...44,476,443 JBrowse link
SD-Nkx3-1em1Pjhak-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Nkx3-1em1Pjhak-/- IEA RGD NCBI chr15:44,473,851...44,476,443 JBrowse link
SD-Ogdhem1Yuyi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Ogdhem1Yuyi IEA RGD NCBI chr14:81,150,021...81,217,479 JBrowse link
SD-Rag1/Rag2em1Mlit term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rag1/Rag2em1Mlit IEA RGD
SD-Rag1/Rag2em1MlitIl2rgem1Mlit-/y term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rag1/Rag2em1MlitIl2rgem1Mlit-/y IEA RGD
SD-Rag2em1Hera term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rag2em1Hera IEA RGD
SD-Rag2em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rag2em2Mcwi IEA RGD NCBI chr 3:87,907,941...87,907,942 JBrowse link
SD-Rag2em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rag2em3Mcwi IEA RGD NCBI chr 3:87,907,936...87,907,945 JBrowse link
SD-Rag2em3McwiIl2rgem2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rag2em3McwiIl2rgem2Mcwi IEA RGD NCBI chr 3:87,907,936...87,907,945
NCBI chr  X:66,398,582...66,398,582
JBrowse link
SD-Rin1em1-/-Hcz term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Rin1em1-/-Hcz IEA RGD NCBI chr 1:202,355,729...202,362,731 JBrowse link
SD-Sdhbem1Ast term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Sdhbem1Ast IEA RGD
SD-Sdhbem2Ast term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Sdhbem2Ast IEA RGD
SD-Sdhbem3Ast term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Sdhbem3Ast IEA RGD
SD-Spon2em1Holi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SD-Spon2em1Holi IEA RGD NCBI chr14:77,505,695...77,518,001 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  rat strain 6664
    mutant strain 1396
      SD mutants 272
        SD (TALEN) mutants 35
          Crl:SD (TALEN) mutants + 12
          Crl:SD (TALEN) mutants (chr 1) + 1
          Crl:SD (TALEN) mutants (chr 3) + 4
          Crl:SD (TALEN) mutants (chr X) + 2
          HsdHot:SD (TALEN) mutants + 2
          HsdHot:SD (TALEN) mutants (chr 8) + 2
          SD-Abcc8em1Cgen 1
          SD-Apoa4em1Bcgen 1
          SD-Apoeem1Ejt 1
          SD-Aqp4em1Hrt 1
          SD-Il2rgem1-/y/Mlit + 2
          SD-Lamp2em1 1
          SD-Leprem1 1
          SD-Leprem2 1
          SD-Leprem3 1
          SD-Muc1em1Cgen 1
          SD-Mutem1Dba 0
          SD-Nkx3-1em1Pjhak+/- 1
          SD-Nkx3-1em1Pjhak-/- 1
          SD-Ogdhem1Yuyi 1
          SD-Rag1/Rag2em1Mlit + 2
          SD-Rag2em1Hera 1
          SD-Rin1em1-/-Hcz 1
          SD-Sdhbem1Ast 1
          SD-Sdhbem2Ast 1
          SD-Sdhbem3Ast 1
          SD-Spon2em1Holi 1
paths to the root