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RAT STRAINS - ANNOTATIONS

The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:SS/JrHsdMcwi (CRISPR/Cas9) mutants
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Accession:RS:0003960 term browser browse the term


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SS-Adora1em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Adora1em3Mcwi IEA RGD NCBI chr13:45,658,872...45,695,821 JBrowse link
SS-Adora1em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Adora1em4Mcwi IEA RGD NCBI chr13:45,658,872...45,695,821 JBrowse link
SS-Adora2aem3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Adora2aem3Mcwi IEA RGD NCBI chr20:13,315,848...13,333,386 JBrowse link
SS-Adora2aem5Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Adora2aem5Mcwi IEA RGD NCBI chr20:13,315,848...13,333,386 JBrowse link
SS-Arhgef11em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Arhgef11em4Mcwi IEA RGD NCBI chr 2:173,074,383...173,195,962 JBrowse link
SS-Arhgef11em5Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Arhgef11em5Mcwi IEA RGD NCBI chr 2:173,074,383...173,195,962 JBrowse link
SS-Avpr2em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Avpr2em4Mcwi IEA RGD NCBI chr  X:151,633,501...151,636,155 JBrowse link
SS-Avpr2em5Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Avpr2em5Mcwi IEA RGD NCBI chr  X:151,633,501...151,636,155 JBrowse link
SS-Axlem1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Axlem1Mcwi IEA RGD NCBI chr 1:81,265,088...81,296,278 JBrowse link
SS-Axlem2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Axlem2Mcwi IEA RGD NCBI chr 1:81,265,088...81,296,278 JBrowse link
SS-Casrem1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Casrem1Mcwi IEA RGD NCBI chr11:64,235,251...64,304,811 JBrowse link
SS-Cd14em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Cd14em1Mcwi IEA RGD NCBI chr18:28,335,522...28,337,383 JBrowse link
SS-Cd14em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Cd14em2Mcwi IEA RGD NCBI chr18:28,335,522...28,337,383 JBrowse link
SS-Cgnl1em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Cgnl1em1Mcwi IEA RGD NCBI chr 8:72,273,401...72,424,842 JBrowse link
SS-Cgnl1em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Cgnl1em2Mcwi IEA RGD NCBI chr 8:72,273,401...72,424,842 JBrowse link
SS-Cybbem1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Cybbem1Mcwi IEA RGD NCBI chr  X:13,358,101...13,392,570 JBrowse link
SS-Cybbem3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Cybbem3Mcwi IEA RGD NCBI chr  X:13,358,101...13,392,570 JBrowse link
SS-Del(1q)2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Del(1q)2Mcwi IEA RGD
SS-F8em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-F8em1Mcwi IEA RGD NCBI chr18:140,848...172,330 JBrowse link
SS-F8em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-F8em2Mcwi IEA RGD
SS-Kcnj10em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Kcnj10em1Mcwi IEA RGD NCBI chr13:84,802,026...84,835,383 JBrowse link
SS-Kcnj10em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Kcnj10em3Mcwi IEA RGD NCBI chr13:84,802,026...84,835,383 JBrowse link
SS-Kcnj13em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Kcnj13em1Mcwi IEA RGD NCBI chr 9:88,066,091...88,066,092 JBrowse link
SS-Kcnj2em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Kcnj2em2Mcwi IEA RGD NCBI chr10:96,066,338...96,066,365 JBrowse link
SS-Kcnj2em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Kcnj2em4Mcwi IEA RGD NCBI chr10:96,066,345...96,066,346 JBrowse link
SS-Kcnq1em5Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Kcnq1em5Mcwi IEA RGD NCBI chr 1:198,291,711...198,624,683 JBrowse link
SS-Mlycdem1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Mlycdem1Mcwi IEA RGD
SS-Mmp9em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Mmp9em4Mcwi IEA RGD NCBI chr 3:153,685,624...153,685,781 JBrowse link
SS-Mmp9em6Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Mmp9em6Mcwi IEA RGD NCBI chr 3:153,685,771...153,685,771 JBrowse link
SS-Nlrp10em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nlrp10em2Mcwi IEA RGD NCBI chr 1:162,924,483...162,924,493 JBrowse link
SS-Nlrp10em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nlrp10em3Mcwi IEA RGD NCBI chr 1:162,924,489...162,924,498 JBrowse link
SS-Nlrp12em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nlrp12em1Mcwi IEA RGD NCBI chr 1:65,941,549...65,941,550 JBrowse link
SS-Nlrp3em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nlrp3em1Mcwi IEA RGD NCBI chr10:44,329,222...44,329,231 JBrowse link
SS-Nlrp3em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Nlrp3em2Mcwi IEA RGD NCBI chr10:44,326,770...44,353,814 JBrowse link
SS-P2rx1em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-P2rx1em1Mcwi IEA RGD NCBI chr10:57,626,708...57,626,731 JBrowse link
SS-P2rx1em6Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-P2rx1em6Mcwi IEA RGD NCBI chr10:57,626,714...57,626,715 JBrowse link
SS-P2rx1em7Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-P2rx1em7Mcwi IEA RGD NCBI chr10:57,626,713...57,626,719 JBrowse link
SS-P2rx7em10Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-P2rx7em10Mcwi IEA RGD NCBI chr12:33,917,656...33,917,666 JBrowse link
SS-P2rx7em12Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-P2rx7em12Mcwi IEA RGD NCBI chr12:33,917,654...33,917,663 JBrowse link
SS-P2rx7em13Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-P2rx7em13Mcwi IEA RGD NCBI chr12:33,917,654...33,917,663 JBrowse link
SS-P2ry2em5Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-P2ry2em5Mcwi IEA RGD NCBI chr 1:155,354,461...155,354,487 JBrowse link
SS-P2ry2em6Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-P2ry2em6Mcwi IEA RGD NCBI chr 1:155,354,365...155,354,496 JBrowse link
SS-P2ry2em7Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-P2ry2em7Mcwi IEA RGD NCBI chr 1:155,354,367...155,354,481 JBrowse link
SS-Pon1em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Pon1em1Mcwi IEA RGD NCBI chr 4:33,294,737...33,325,759 JBrowse link
SS-Pon1em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Pon1em2Mcwi IEA RGD NCBI chr 4:33,294,737...33,325,759 JBrowse link
SS-Pon1em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Pon1em3Mcwi IEA RGD NCBI chr 4:33,294,737...33,325,759 JBrowse link
SS-Pon3em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Pon3em1Mcwi IEA RGD NCBI chr 4:33,356,983...33,383,681 JBrowse link
SS-Prr5em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Prr5em1Mcwi IEA RGD NCBI chr 7:115,795,351...115,837,880 JBrowse link
SS-Prr5em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Prr5em2Mcwi IEA RGD NCBI chr 7:115,795,351...115,837,880 JBrowse link
SS-Ptgs2em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Ptgs2em1Mcwi IEA RGD NCBI chr13:62,165,923...62,165,975 JBrowse link
SS-Ptgs2em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Ptgs2em2Mcwi IEA RGD NCBI chr13:62,165,974...62,165,981 JBrowse link
SS-Ptk2bem1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Ptk2bem1Mcwi IEA RGD NCBI chr15:40,414,764...40,414,771 JBrowse link
SS-Ptk2bem3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Ptk2bem3Mcwi IEA RGD NCBI chr15:40,414,760...40,414,771 JBrowse link
SS-Rfwd2em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Rfwd2em1Mcwi IEA RGD NCBI chr13:71,467,164...71,561,826 JBrowse link
SS-Rictorem4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Rictorem4Mcwi IEA RGD NCBI chr 2:55,811,877...55,903,893 JBrowse link
SS-Sirt3em25Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Sirt3em25Mcwi IEA RGD NCBI chr 1:195,955,354...195,955,366 JBrowse link
SS-Sirt3em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Sirt3em4Mcwi IEA RGD NCBI chr 1:51,262,005...51,262,008 JBrowse link
SS-Spp1em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Spp1em3Mcwi IEA RGD NCBI chr14:5,308,885...5,315,120 JBrowse link
SS-Spp1em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Spp1em4Mcwi IEA RGD NCBI chr14:5,308,885...5,315,120 JBrowse link
SS-Stk39em5Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Stk39em5Mcwi IEA RGD NCBI chr 3:52,913,583...53,179,060 JBrowse link
SS-Stk39em6Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Stk39em6Mcwi IEA RGD NCBI chr 3:52,913,583...53,179,060 JBrowse link
SS-Tlr4em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Tlr4em1Mcwi IEA RGD NCBI chr 5:80,145,867...80,159,501 JBrowse link
SS-Trpc3em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Trpc3em1Mcwi IEA RGD NCBI chr 2:119,481,313...119,619,333 JBrowse link
SS-Trpc3em2Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Trpc3em2Mcwi IEA RGD NCBI chr 2:119,481,313...119,619,333 JBrowse link
SS-Trpc6em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Trpc6em1Mcwi IEA RGD NCBI chr 8:5,759,387...5,864,000 JBrowse link
SS-Trpc6em3Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Trpc6em3Mcwi IEA RGD NCBI chr 8:5,759,387...5,864,000 JBrowse link
SS-Trpc6em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Trpc6em4Mcwi IEA RGD NCBI chr 8:5,759,387...5,864,000 JBrowse link
SS-Xdhem1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Xdhem1Mcwi-/- IEA RGD NCBI chr 6:21,530,463...21,592,172 JBrowse link
SS-Xdhem1Mcwi+/+ term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Xdhem1Mcwi+/+ IEA RGD
SS-Xdhem1Mcwi+/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S SS-Xdhem1Mcwi+/- IEA RGD NCBI chr 6:21,530,463...21,592,172 JBrowse link
WKY-Trpv2em1Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S WKY-Trpv2em1Mcwi IEA RGD NCBI chr10:47,265,524...47,294,263 JBrowse link
WKY-Trpv4em4Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S WKY-Trpv4em4Mcwi IEA RGD NCBI chr12:41,938,533...41,977,517 JBrowse link
WKY-Trpv4em5Mcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
S WKY-Trpv4em5Mcwi IEA RGD NCBI chr12:41,938,533...41,977,517 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  rat strain 6715
    mutant strain 1400
      SS mutants 424
        SS/JrHsdMcwi mutants 412
          SS/JrHsdMcwi (CRISPR/Cas9) mutants 73
            SS-Adora2aem3Mcwi 1
            SS-Adora2aem5Mcwi 1
            SS-Arhgef11em4Mcwi 1
            SS-Arhgef11em5Mcwi 1
            SS-Avpr2em2Mcwi 0
            SS-Avpr2em3Mcwi 0
            SS-Avpr2em4Mcwi 1
            SS-Avpr2em5Mcwi 1
            SS-Axlem1Mcwi 1
            SS-Axlem2Mcwi 1
            SS-Casrem1Mcwi 1
            SS-Cd14em1Mcwi 1
            SS-Cd14em2Mcwi 1
            SS-Cgnl1em1Mcwi 1
            SS-Cgnl1em2Mcwi 1
            SS-Cybbem1Mcwi 1
            SS-Cybbem3Mcwi 1
            SS-Del(1q)2Mcwi 1
            SS-F8em1Mcwi 1
            SS-F8em2Mcwi 1
            SS-Kcnj10em1Mcwi 1
            SS-Kcnj10em3Mcwi 1
            SS-Kcnj13em1Mcwi 1
            SS-Kcnj2em2Mcwi 1
            SS-Kcnj2em4Mcwi 1
            SS-Kcnq1em5Mcwi 1
            SS-Mlycdem1Mcwi 1
            SS-Mmp9em4Mcwi 1
            SS-Mmp9em6Mcwi 1
            SS-Nlrp10em2Mcwi 1
            SS-Nlrp10em3Mcwi 1
            SS-Nlrp12em1Mcwi 1
            SS-Nlrp3em1Mcwi 1
            SS-Nlrp3em2Mcwi 1
            SS-P2rx1em1Mcwi 1
            SS-P2rx1em6Mcwi 1
            SS-P2rx1em7Mcwi 1
            SS-P2rx7em10Mcwi 1
            SS-P2rx7em12Mcwi 1
            SS-P2rx7em13Mcwi 1
            SS-P2ry2em5Mcwi 1
            SS-P2ry2em6Mcwi 1
            SS-P2ry2em7Mcwi 1
            SS-Pon1em1Mcwi 1
            SS-Pon1em2Mcwi 1
            SS-Pon1em3Mcwi 1
            SS-Pon3em1Mcwi 1
            SS-Prr5em1Mcwi 1
            SS-Prr5em2Mcwi 1
            SS-Ptgs2em1Mcwi 1
            SS-Ptgs2em2Mcwi 1
            SS-Ptk2bem1Mcwi 1
            SS-Ptk2bem3Mcwi 1
            SS-Rictorem4Mcwi 1
            SS-Rr1em3Mcwi 0
            SS-Sirt3em25Mcwi 1
            SS-Sirt3em4Mcwi 1
            SS-Spp1em3Mcwi 1
            SS-Spp1em4Mcwi 1
            SS-Stk39em5Mcwi 1
            SS-Stk39em6Mcwi 1
            SS-Tlr4em1Mcwi 1
            SS-Trpc3em1Mcwi 1
            SS-Trpc3em2Mcwi 1
            SS-Trpc6em1Mcwi 1
            SS-Trpc6em3Mcwi 1
            SS-Trpc6em4Mcwi 1
            SS-Xdhem1Mcwi 1
            SS-Xdhem1Mcwi+/+ 1
            SS-Xdhem1Mcwi+/- 1
            SS/JrHsdMcwi (CRISPR/Cas9) mutants (chr 13) + 5
            WKY-Trpv2em1Mcwi 1
            WKY-Trpv4em4Mcwi 1
            WKY-Trpv4em5Mcwi 1
paths to the root