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RAT STRAINS - ANNOTATIONS
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The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (
http://rgd.mcw.edu/contact/index.shtml
).
Term:
SS/JrHsdMcwi (ZFN) mutants (chr 5)
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Accession:
RS:0002989
browse the term
show annotations for term's descendants Sort by:
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Rat (23)
Mouse (0)
Human (0)
Chinchilla (0)
Bonobo (0)
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Squirrel (0)
Pig (0)
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Naked Mole-rat (0)
All
Strains (23)
SS-Agtrapem4Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Agtrap
em4Mcwi
IEA
RGD
NCBI chr 5:158,507,427...158,519,036
SS-Agtrapem4Mcwi+/+
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Agtrap
em4Mcwi+/+
SS-
Agtrap
em4Mcwi+
/Agtrap
em4Mcwi+
IEA
RGD
SS-Agtrapem4Mcwi-/-
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Agtrap
em4Mcwi-/-
SS-
Agtrap
em4Mcwi-
/Agtrap
em4Mcwi-
IEA
RGD
SS-Agtrapem8Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Agtrap
em8Mcwi
IEA
RGD
NCBI chr 5:158,507,427...158,519,036
SS-Agtrapem8Mcwi+/+
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Agtrap
em8Mcwi+/+
SS-
Agtrap
em8Mcwi+
/Agtrap
em8Mcwi+
IEA
RGD
SS-Agtrapem8Mcwi-/-
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Agtrap
em8Mcwi-/-
SS-
Agtrap
em8Mcwi-
/Agtrap
em8Mcwi-
IEA
RGD
SS-Clcn6em2Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Clcn6
em2Mcwi
IEA
RGD
NCBI chr 5:158,434,299...158,465,174
SS-Leprem2Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Lepr
em2Mcwi
IEA
RGD
NCBI chr 5:116,294,409...116,477,904
SS-Mthfrem1Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Mthfr
em1Mcwi
IEA
RGD
NCBI chr 5:158,467,728...158,467,755
SS-Mthfrem1Mcwi+/+
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Mthfr
em1Mcwi+/+
SS-
Mthfr
em1Mcwi+
/Mthfr
em1Mcwi+
IEA
RGD
SS-Mthfrem1Mcwi-/+
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Mthfr
em1Mcwi-/+
SS-
Mthfr
em1Mcwi-
/Mthfr
em1Mcwi+
IEA
RGD
SS-Nppaem4Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Nppa
em4Mcwi
IEA
RGD
NCBI chr 5:158,429,042...158,430,351
SS-Nppaem4Mcwi+/+
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Nppa
em4Mcwi+/+
SS-
Nppa
em4Mcwi+
/
Nppa
em4Mcwi+
IEA
RGD
SS-Nppaem4Mcwi-/-
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Nppa
em4Mcwi-/-
SS-
Nppa
em4Mcwi-
/Nppa
em4Mcwi-
IEA
RGD
SS-Nppbem2Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Nppb
em2Mcwi
IEA
RGD
NCBI chr 5:158,416,813...158,418,175
SS-Nppbem2Mcwi+/+
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Nppb
em2Mcwi+/+
SS-
Nppb
em2Mcwi+
/
Nppb
em2Mcwi+
IEA
RGD
SS-Nppbem2Mcwi-/-
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Nppb
em2Mcwi-/-
SS-
Nppb
em2Mcwi-
/
Nppb
em2Mcwi-
IEA
RGD
NCBI chr 5:158,416,813...158,418,175
SS-Nppbem4Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Nppb
em4Mcwi
IEA
RGD
NCBI chr 5:158,416,813...158,418,175
SS-Nppbem4Mcwi+/+
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Nppb
em4Mcwi+/+
SS-
Nppb
em4Mcwi+
/Nppb
em4Mcwi+
IEA
RGD
SS-Nppbem4Mcwi-/-
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Nppb
em4Mcwi-/-
SS-
Nppb
em4Mcwi-
/Nppb
em4Mcwi-
IEA
RGD
SS-Plod1em1Mcwi
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Plod1
em1Mcwi
IEA
RGD
NCBI chr 5:158,340,674...158,367,581
SS-Plod1em1Mcwi+/+
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Plod1
em1Mcwi+/+
SS-
Plod1
em1Mcwi+
/Plod1
em1Mcwi+
IEA
RGD
SS-Plod1em1Mcwi-/-
Symbol
Object Name
Evidence
Notes
Source
PubMed Reference(s)
RGD Reference(s)
Position
S
SS-
Plod1
em1Mcwi-/-
SS-
Plod1
em1Mcwi-
/Plod1
em1Mcwi-
IEA
RGD
Term paths to the root
one shortest
all shortest
one longest
all longest
one shortest and longest
all
Path 1
Term
Annotations
rat strain
6722
chromosome altered
2411
chromosome 5
203
chromosome 5 mutant
66
SS/JrHsdMcwi (ZFN) mutants (chr 5)
23
SS-Agtrapem4Mcwi
+
3
SS-Agtrapem8Mcwi
+
3
SS-Clcn6em2Mcwi
1
SS-Leprem2Mcwi
1
SS-Mthfrem1Mcwi
+
3
SS-Nppaem4Mcwi
+
3
SS-Nppbem2Mcwi
+
3
SS-Nppbem4Mcwi
+
3
SS-Plod1em1Mcwi
+
3