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RAT STRAINS - ANNOTATIONS

The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:chromosome 5
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Accession:RS:0002702 term browser browse the term


show annotations for term's descendants           Sort by:
ACI.BN-(D5Rat113-D5Rat159)/Shul term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Emca13 Estrogen-induced mammary cancer QTL 13 IEA RGD PMID:23151807 RGD:7364727 NCBI chr 5:14,606,078...59,606,078 JBrowse link
ACI.BN-(D5Rat60-D5Rat115)/Shul term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Emca11 Estrogen-induced mammary cancer QTL 11 IEA RGD PMID:23151807 RGD:7364727 NCBI chr 5:73,176,602...118,176,602 JBrowse link
ACI.BN-(D5Uwm70-D5Rat32)/Shul term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Emca12 Estrogen-induced mammary cancer QTL 12 IEA RGD PMID:23151807 RGD:7364727 NCBI chr 5:94,034,903...139,034,903 JBrowse link
DA.WOKW-(D5Mgh6-D5Mit5)/K term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl64 Serum cholesterol level QTL 64 IEA 0.001 RGD PMID:19584880 RGD:2312642 NCBI chr 5:73,779,642...118,779,642 JBrowse link
F344.OLETF-(D5Rat166-D5Rat90)/Tj term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Niddm24 Non-insulin dependent diabetes mellitus QTL 24 IEA 3.79 RGD PMID:12420133 RGD:625760 NCBI chr 1:224,633,915...269,633,915 JBrowse link
HAS.LAS-(D5Rat70-D5Rat37)/Rar term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Alcrsp18 Alcohol response QTL 18 IEA RGD PMID:15608595 RGD:1334439 NCBI chr 5:39,985,948...84,985,948 JBrowse link
SHR.BN-(D5Wox12-D5Wox20)/Ipcv term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp139 Blood pressure QTL 139 IEA 0.001 RGD PMID:12790759 RGD:631851
SPRD.WKY-(D5Rat190-D5Rat114)/Ibmm term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mamtr5 Mammary tumor resistance QTL 5 IEA RGD PMID:17230524 RGD:1599390 NCBI chr 5:23,671,493...68,671,493 JBrowse link
SS.LEW-(D5Mco39-D5Mco41)/Mco term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp372 Blood pressure QTL 372 IEA 0.0058 RGD PMID:23757393 RGD:7495753
SS.LEW-(D5Mco42-D5Mco47)/2Mco term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp373 Blood pressure QTL 373 IEA 0.0058 RGD PMID:23757393 RGD:7495753
SS.LEW-(D5Rat130-D5Rat108)/Jr term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp156 Blood pressure QTL 156 IEA RGD PMID:11875185 RGD:619649 NCBI chr 5:89,369,373...134,369,373 JBrowse link
Q Bp157 Blood pressure QTL 157 IEA RGD PMID:11875185 RGD:619649 NCBI chr 5:114,474,223...121,056,531 JBrowse link
SS.LEW-(D5Rat130-D5Rat108)/JrMcwi term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf54 Renal function QTL 54 IEA RGD PMID:16396943 RGD:1578407 NCBI chr 5:133,270,647...172,190,305 JBrowse link
SS.LEW-(D5Rat130-D5Rat31)/JrMcwi term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf54 Renal function QTL 54 IEA RGD PMID:16396943 RGD:1578407 NCBI chr 5:133,270,647...172,190,305 JBrowse link
SS.SR-(rs65785750-rs106808193)/Opaz term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp359 Blood pressure QTL 359 IEA RGD PMID:22860086 RGD:7364997 NCBI chr 5:133,308,734...140,009,902 JBrowse link
W-LeprfaNin term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw146 Body weight QTL 146 IEA 0.001 19.84 RGD PMID:24204914 RGD:8657042 NCBI chr 5:98,972,960...143,972,960 JBrowse link
WF.WKY-(D5Uwm63-D5Uwm64)/Uwm term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mcs12 Mammary carcinoma susceptibility QTL 12 IEA 1.0E-4 RGD PMID:16266982 RGD:1559294
WF.WKY-(D5Uwm65-D5Uwm60)/Uwm term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mcs13 Mammary carcinoma susceptibility QTL 13 IEA 1.0E-4 RGD PMID:16266982 RGD:1559294
WF.WKY-(D5Uwm66-D5Uwm67)/Uwm term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mcs13 Mammary carcinoma susceptibility QTL 13 IEA 1.0E-4 RGD PMID:16266982 RGD:1559294
WF.WKY-(D5Uwm68-D5Mit4)/Uwm term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mcs14 Mammary carcinoma susceptibility QTL 14 IEA 1.0E-4 RGD PMID:16266982 RGD:1559294
WF.WKY-(D5Uwm78-D5Uwm93)/Uwm term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mcs28 Mammary carcinoma susceptibility QTL 28 IEA RGD PMID:21205740 RGD:5684388
WF.WKY-(D5Uwm82-D5Uwm91)/Uwm term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mcs29 Mammary carcinoma susceptibility QTL 29 IEA RGD PMID:21205740 RGD:5684388 NCBI chr 5:38,004,331...83,004,331 JBrowse link
WF.WKY-(D5Wox7-D5Uwm37)/Uwm term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mamtr1 Mammary tumor resistance QTL 1 IEA 1.0E-4 RGD PMID:12844486 RGD:631852 NCBI chr 5:17,576,633...62,576,633 JBrowse link
WF.WKY-(D5Wox8-D5Uwm62)/Uwm term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mcs12 Mammary carcinoma susceptibility QTL 12 IEA 1.0E-4 RGD PMID:16266982 RGD:1559294
WKY.WKHA-(D5Rat45-D5Rat245)/Cfd term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Cm24 Cardiac mass QTL 24 IEA 3.5 RGD PMID:11157676 RGD:619659 NCBI chr 5:149,805,999...162,987,697 JBrowse link
ZUC-LeprfaSte-/- term browser
Symbol Object Name Evidence rsID P Value LOD Score Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw124 Body weight QTL 124 IEA 3.0E-4 3.2 RGD PMID:20159938 RGD:7365117 NCBI chr 3:104,545,086...149,545,086 JBrowse link
Q Bw125 Body weight QTL 125 IEA 0.0047 3.0 RGD PMID:20159938 RGD:7365117 NCBI chr10:65,390,777...107,713,808 JBrowse link
Q Kidm42 Kidney mass QTL 42 IEA 4.0E-4 3.03 RGD PMID:20159938 RGD:7365117 NCBI chr12:1...41,361,854 JBrowse link
Q Stl32 Serum triglyceride level QTL 32 IEA 3.0E-4 3.2 RGD PMID:20159938 RGD:7365117 NCBI chr 2:24,117,813...69,117,813 JBrowse link
Q Uae40 Urinary albumin excretion QTL 40 IEA 0.0052 2.9 RGD PMID:20159938 RGD:7365117 NCBI chr 4:18,913,151...63,913,151 JBrowse link
Q Uae41 Urinary albumin excretion QTL 41 IEA 0.1874 5.26 RGD PMID:20159938 RGD:7365117 NCBI chr10:1...30,004,247 JBrowse link
Q Uae42 Urinary albumin excretion QTL 42 IEA 0.61 RGD PMID:20159938 RGD:7365117 NCBI chr14:22,521,517...67,521,517 JBrowse link
Q Uae43 Urinary albumin excretion QTL 43 IEA 0.4174 5.69 RGD PMID:20159938 RGD:7365117 NCBI chr13:68,983,334...109,350,286 JBrowse link
Q Uae44 Urinary albumin excretion QTL 44 IEA 0.1712 RGD PMID:20159938 RGD:7365117 NCBI chr20:1...26,128,279 JBrowse link
Q Uae45 Urinary albumin excretion QTL 45 IEA 0.0021 2.86 RGD PMID:20159938 RGD:7365117 NCBI chr 1:233,204,160...270,518,180 JBrowse link
Q Uae46 Urinary albumin excretion QTL 46 IEA 0.0056 3.6 RGD PMID:20159938 RGD:7365117 NCBI chr 1:210,980,612...255,980,612 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  rat strain 6786
    chromosome altered 2411
      chromosome 5 203
        chromosome 5 coisogenic + 4
        chromosome 5 congenic + 132
        chromosome 5 consomic + 2
        chromosome 5 mutant + 66
paths to the root