Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper VCMap
Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

RAT STRAINS - ANNOTATIONS

The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:chromosome 5
go back to main search page
Accession:RS:0002702 term browser browse the term


show annotations for term's descendants           Sort by:
 
ACI.BN-(D5Rat113-D5Rat159)/Shul term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Emca13 Estrogen-induced mammary cancer QTL 13 IEA RGD PMID:23151807 RGD:7364727 NCBI chr 5:9,823,266...99,753,708 JBrowse link
ACI.BN-(D5Rat60-D5Rat115)/Shul term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Emca11 Estrogen-induced mammary cancer QTL 11 IEA RGD PMID:23151807 RGD:7364727 NCBI chr 5:99,753,548...113,061,097 JBrowse link
ACI.BN-(D5Uwm70-D5Rat32)/Shul term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Emca12 Estrogen-induced mammary cancer QTL 12 IEA RGD PMID:23151807 RGD:7364727 NCBI chr 5:124,160,767...133,749,643 JBrowse link
DA.WOKW-(D5Mgh6-D5Mit5)/K term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl64 Serum cholesterol level QTL 64 IEA RGD PMID:19584880 RGD:2312642 NCBI chr 5:68,984,307...104,251,008 JBrowse link
F344.OLETF-(D5Rat166-D5Rat90)/Tj term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Niddm24 Non-insulin dependent diabetes mellitus QTL 24 IEA RGD PMID:12420133 RGD:625760 NCBI chr 1:214,647,894...259,647,894 JBrowse link
HAS.LAS-(D5Rat70-D5Rat37)/Rar term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Alcrsp18 Alcohol response QTL 18 IEA RGD PMID:15608595 RGD:1334439 NCBI chr 5:35,189,153...141,643,988 JBrowse link
SHR.BN-(D5Wox12-D5Wox20)/Ipcv term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp139 Blood pressure QTL 139 IEA RGD PMID:12790759 RGD:631851 NCBI chr 5:128,924,607...166,875,058 JBrowse link
SPRD.WKY-(D5Rat190-D5Rat114)/Ibmm term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mamtr5 Mammary tumor resistance QTL 5 IEA RGD PMID:17230524 RGD:1599390 NCBI chr 5:18,873,947...63,873,947 JBrowse link
SS.LEW-(D5Mco39-D5Mco41)/Mco term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp372 Blood pressure QTL 372 IEA RGD PMID:23757393 RGD:7495753 NCBI chr 5:117,913,688...125,222,967 JBrowse link
SS.LEW-(D5Mco42-D5Mco47)/2Mco term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp373 Blood pressure QTL 373 IEA RGD PMID:23757393 RGD:7495753 NCBI chr 5:112,175,546...116,047,089 JBrowse link
SS.LEW-(D5Rat130-D5Rat108)/Jr term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp156 Blood pressure QTL 156 IEA RGD PMID:11875185 RGD:619649 NCBI chr 5:84,132,602...129,132,602 JBrowse link
Q Bp157 Blood pressure QTL 157 IEA RGD PMID:11875185 RGD:619649
SS.LEW-(D5Rat130-D5Rat108)/JrMcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf54 Renal function QTL 54 IEA RGD PMID:16396943 RGD:1578407 NCBI chr 5:128,033,842...133,011,550 JBrowse link
SS.LEW-(D5Rat130-D5Rat31)/JrMcwi term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Rf54 Renal function QTL 54 IEA RGD PMID:16396943 RGD:1578407 NCBI chr 5:128,033,842...133,011,550 JBrowse link
SS.SR-(rs65785750-rs106808193)/Opaz term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bp359 Blood pressure QTL 359 IEA RGD PMID:22860086 RGD:7364997
W-LeprfaNin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw146 Body weight QTL 146 IEA RGD PMID:24204914 RGD:8657042 NCBI chr 5:108,938,288...153,938,288 JBrowse link
WF.WKY-(D5Uwm63-D5Uwm64)/Uwm term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mcs12 Mammary carcinoma susceptibility QTL 12 IEA RGD PMID:16266982 RGD:1559294 NCBI chr 5:58,973,449...60,051,321 JBrowse link
WF.WKY-(D5Uwm65-D5Uwm60)/Uwm term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mcs13 Mammary carcinoma susceptibility QTL 13 IEA RGD PMID:16266982 RGD:1559294 NCBI chr 5:63,190,890...69,927,503 JBrowse link
WF.WKY-(D5Uwm66-D5Uwm67)/Uwm term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mcs13 Mammary carcinoma susceptibility QTL 13 IEA RGD PMID:16266982 RGD:1559294 NCBI chr 5:63,190,890...69,927,503 JBrowse link
WF.WKY-(D5Uwm68-D5Mit4)/Uwm term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mcs14 Mammary carcinoma susceptibility QTL 14 IEA RGD PMID:16266982 RGD:1559294 NCBI chr 5:76,369,776...80,813,390 JBrowse link
WF.WKY-(D5Uwm78-D5Uwm93)/Uwm term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mcs28 Mammary carcinoma susceptibility QTL 28 IEA RGD PMID:21205740 RGD:5684388 NCBI chr 5:77,743,239...78,039,084 JBrowse link
WF.WKY-(D5Uwm82-D5Uwm91)/Uwm term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mcs29 Mammary carcinoma susceptibility QTL 29 IEA RGD PMID:21205740 RGD:5684388 NCBI chr 5:77,816,155...77,988,860 JBrowse link
WF.WKY-(D5Wox7-D5Uwm37)/Uwm term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mamtr1 Mammary tumor resistance QTL 1 IEA RGD PMID:12844486 RGD:631852 NCBI chr 5:12,789,751...113,558,310 JBrowse link
WF.WKY-(D5Wox8-D5Uwm62)/Uwm term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Mcs12 Mammary carcinoma susceptibility QTL 12 IEA RGD PMID:16266982 RGD:1559294 NCBI chr 5:58,973,449...60,051,321 JBrowse link
WKY.WKHA-(D5Rat45-D5Rat245)/Cfd term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Cm24 Cardiac mass QTL 24 IEA RGD PMID:11157676 RGD:619659 NCBI chr 5:143,799,107...158,428,037 JBrowse link
ZUC-LeprfaSte-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw124 Body weight QTL 124 IEA RGD PMID:20159938 RGD:7365117
Q Bw125 Body weight QTL 125 IEA RGD PMID:20159938 RGD:7365117
Q Kidm42 Kidney mass QTL 42 IEA RGD PMID:20159938 RGD:7365117
Q Stl32 Serum triglyceride level QTL 32 IEA RGD PMID:20159938 RGD:7365117
Q Uae40 Urinary albumin excretion QTL 40 IEA RGD PMID:20159938 RGD:7365117
Q Uae41 Urinary albumin excretion QTL 41 IEA RGD PMID:20159938 RGD:7365117
Q Uae42 Urinary albumin excretion QTL 42 IEA RGD PMID:20159938 RGD:7365117
Q Uae43 Urinary albumin excretion QTL 43 IEA RGD PMID:20159938 RGD:7365117
Q Uae44 Urinary albumin excretion QTL 44 IEA RGD PMID:20159938 RGD:7365117
Q Uae45 Urinary albumin excretion QTL 45 IEA RGD PMID:20159938 RGD:7365117
Q Uae46 Urinary albumin excretion QTL 46 IEA RGD PMID:20159938 RGD:7365117 NCBI chr 1:201,554,356...246,554,356 JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  rat strain 6406
    chromosome altered 2393
      chromosome 5 200
        chromosome 5 coisogenic + 3
        chromosome 5 congenic + 130
        chromosome 5 consomic + 2
        chromosome 5 mutant + 67
paths to the root