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RAT STRAINS - ANNOTATIONS

The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:outbred strain
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Accession:RS:0000462 term browser browse the term
Definition:Outbreds are intentionally not bred with siblings or close relatives, as the purpose of an outbred stock is to maintain maximum heterozygosity.



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13M term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw120 Body weight QTL 120 IEA RGD PMID:9169130 RGD:61083 NCBI chr12:12,351,619...46,669,029 JBrowse link
Q Niddm4 Non-insulin dependent diabetes mellitus QTL 4 IEA RGD PMID:9169130 RGD:61083 NCBI chr 1:206,329,708...222,745,518 JBrowse link
Q Niddm6 Non-insulin dependent diabetes mellitus QTL 6 IEA RGD PMID:9169130 RGD:61083 NCBI chr16:4,227,609...48,972,724 JBrowse link
Q Pancm1 Pancreatic morphology QTL 1 IEA RGD PMID:9169130 RGD:61083 NCBI chr 1:181,759,564...214,537,555 JBrowse link
Iusm:HAD1 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Alc10 Alcohol consumption QTL 10 IEA RGD PMID:14634485 RGD:731212 NCBI chr12:19,610,870...40,218,516 JBrowse link
Q Alc11 Alcohol consumption QTL 11 IEA RGD PMID:14634485 RGD:731212 NCBI chr16:4,227,609...60,252,231 JBrowse link
Q Alc4 Alcohol consumption QTL 4 IEA RGD PMID:10979603 RGD:631230 NCBI chr 5:8,187,501...18,616,199 JBrowse link
Q Alc5 Alcohol consumption QTL 5 IEA RGD PMID:10979603 RGD:631230 NCBI chr10:5,144,027...17,245,662 JBrowse link
Q Alc6 Alcohol consumption QTL 6 IEA RGD PMID:10979603 RGD:631230 NCBI chr12:28,607,526...37,691,617 JBrowse link
Q Alc7 Alcohol consumption QTL 7 IEA RGD PMID:12960747 RGD:724636 NCBI chr16:1...26,727,669 JBrowse link
Q Alc9 Alcohol consumption QTL 9 IEA RGD PMID:14634485 RGD:731212 NCBI chr10:5,144,027...19,233,348 JBrowse link
Iusm:HAD2 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Alc12 Alcohol consumption QTL 12 IEA RGD PMID:14634485 RGD:731212 NCBI chr10:17,245,513...19,388,279 JBrowse link
Q Alc13 Alcohol consumption QTL 13 IEA RGD PMID:14634485 RGD:731212 NCBI chr16:4,227,609...16,039,848 JBrowse link
Iusm:LAD1 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Alc10 Alcohol consumption QTL 10 IEA RGD PMID:14634485 RGD:731212 NCBI chr12:19,610,870...40,218,516 JBrowse link
Q Alc11 Alcohol consumption QTL 11 IEA RGD PMID:14634485 RGD:731212 NCBI chr16:4,227,609...60,252,231 JBrowse link
Q Alc4 Alcohol consumption QTL 4 IEA RGD PMID:10979603 RGD:631230 NCBI chr 5:8,187,501...18,616,199 JBrowse link
Q Alc5 Alcohol consumption QTL 5 IEA RGD PMID:10979603 RGD:631230 NCBI chr10:5,144,027...17,245,662 JBrowse link
Q Alc6 Alcohol consumption QTL 6 IEA RGD PMID:10979603 RGD:631230 NCBI chr12:28,607,526...37,691,617 JBrowse link
Q Alc7 Alcohol consumption QTL 7 IEA RGD PMID:12960747 RGD:724636 NCBI chr16:1...26,727,669 JBrowse link
Q Alc9 Alcohol consumption QTL 9 IEA RGD PMID:14634485 RGD:731212 NCBI chr10:5,144,027...19,233,348 JBrowse link
Iusm:LAD2 term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Alc12 Alcohol consumption QTL 12 IEA RGD PMID:14634485 RGD:731212 NCBI chr10:17,245,513...19,388,279 JBrowse link
Q Alc13 Alcohol consumption QTL 13 IEA RGD PMID:14634485 RGD:731212 NCBI chr16:4,227,609...16,039,848 JBrowse link
NAft:HS term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bss113 Bone structure and strength QTL 113 IEA RGD PMID:26297441 RGD:11528619
Q Bss114 Bone structure and strength QTL 114 IEA RGD PMID:26297441 RGD:11528619
Q Bss115 Bone structure and strength QTL 115 IEA RGD PMID:26297441 RGD:11528619
Q Bss117 Bone structure and strength QTL 117 IEA RGD PMID:26297441 RGD:11528619
Q Bss118 Bone structure and strength QTL 118 IEA RGD PMID:26297441 RGD:11528619
Q Bss119 Bone structure and strength QTL 119 IEA RGD PMID:26297441 RGD:11528619
Q Bss120 Bone structure and strength QTL 120 IEA RGD PMID:26297441 RGD:11528619
Q Bss121 Bone structure and strength QTL 121 IEA RGD PMID:26297441 RGD:11528619
NMcwi:HS term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw97 Body weight QTL 97 IEA RGD PMID:22947656 RGD:6893578 NCBI chr 1:225,126,575...227,604,520 JBrowse link
Q Gluco56 Glucose level QTL 56 IEA RGD PMID:20068026 RGD:2316693 NCBI chr 1:199,773,958...202,166,723 JBrowse link
Q Gluco64 Glucose level QTL 64 IEA RGD PMID:22947656 RGD:6893578 NCBI chr 1:199,050,459...200,611,765 JBrowse link
Q Insul17 Insulin level QTL 17 IEA RGD PMID:22947656 RGD:6893578 NCBI chr 1:197,260,913...198,211,706 JBrowse link
Q Insul18 Insulin level QTL 18 IEA RGD PMID:22947656 RGD:6893578 NCBI chr 1:189,607,473...200,611,765 JBrowse link
Q Insul19 Insulin level QTL 19 IEA RGD PMID:22947656 RGD:6893578 NCBI chr 1:197,489,281...200,611,765 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  rat strain 6660
    outbred strain 145
      Crl:CD-Hrhr 1
      Crl:NIH-Foxn1rnu 1
      Crl:OFA(SD) 1
      Crl:OP(CD) 1
      Crl:OR(CD) 1
      Crlj:DON 1
      Crlj:LEC 1
      HAD + 12
      Hsd:RH-Foxn1rnu 1
      Iusm:NP 2
      Iusm:P 2
      LAD + 12
      LE (outbred) + 8
      LIS + 3
      N:HS + 19
      N:NIH 1
      NTac:NIH-Foxn1rnu + 2
      NTac:SHR 1
      NTac:WKY 1
      RCCHan:WIST + 6
      SD + 40
      Scr:sP 1
      WI + 23
      ZUC + 13
paths to the root