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RAT STRAINS - ANNOTATIONS

The Rat Strain Ontology (RS) is currently being developed at the Rat Genome Database. For more information about this vocabulary or to request additions or changes, please contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:mutant strain
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Accession:RS:0000461 term browser browse the term
Definition:Rat strains carrying mutated alleles, spontaneously occurred, chemical-induced, genome-edited and others, are included in the mutant strain.


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AR-Ednrbsl/Hkv term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Coatc10 Coat color QTL 10 IEA RGD PMID:26796131 RGD:10755346 NCBI chr 7:7,496,499...52,496,499 JBrowse link
Q Coatc11 Coat color QTL 11 IEA RGD PMID:26796131 RGD:10755346 NCBI chr 7:17,944,357...62,944,357 JBrowse link
Q Coatc12 Coat color QTL 12 IEA RGD PMID:26796131 RGD:10755346 NCBI chr 7:31,112,832...76,112,832 JBrowse link
Q Coatc13 Coat color QTL 13 IEA RGD PMID:26796131 RGD:10755346 NCBI chr  X:4,406,000...49,406,000 JBrowse link
Q Coatc14 Coat color QTL 14 IEA RGD PMID:26796131 RGD:10755346 NCBI chr12:1...22,591,684 JBrowse link
Q Coatc15 Coat color QTL 15 IEA RGD PMID:26796131 RGD:10755346 NCBI chr14:19,836,944...64,836,944 JBrowse link
Q Coatc16 Coat color QTL 16 IEA RGD PMID:26796131 RGD:10755346 NCBI chr 3:122,438,700...167,438,700 JBrowse link
Q Coatc6 Coat color QTL 6 IEA RGD PMID:26796131 RGD:10755346 NCBI chr 2:11,591,100...56,591,100 JBrowse link
Q Coatc7 Coat color QTL 7 IEA RGD PMID:26796131 RGD:10755346 NCBI chr 2:30,648,065...75,648,065 JBrowse link
Q Coatc8 Coat color QTL 8 IEA RGD PMID:26796131 RGD:10755346 NCBI chr 2:35,023,117...80,023,117 JBrowse link
Q Coatc9 Coat color QTL 9 IEA RGD PMID:26796131 RGD:10755346 NCBI chr 7:3,529,280...48,529,280 JBrowse link
Q Gdil1 Gastrointestinal dilation QTL 1 IEA RGD PMID:22132166 RGD:6480215 NCBI chr 2:56,660,879...74,786,777 JBrowse link
Q Gdil2 Gastrointestinal dilation QTL 2 IEA RGD PMID:25790447 RGD:10402048 NCBI chr 2:24,903,853...74,786,777 JBrowse link
BN-Lx term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl12 Serum cholesterol level QTL 12 IEA RGD PMID:8698878 RGD:61079 NCBI chr19:13,926,401...30,303,727 JBrowse link
Q Scl13 Serum cholesterol level QTL 13 IEA RGD PMID:8698878 RGD:61079
Q Scl23 Serum cholesterol level QTL 23 IEA RGD PMID:8698878 RGD:61079 NCBI chr 4:1...27,716,890 JBrowse link
BN-Lx/Cub term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Anxrr10 Anxiety related response QTL 10 IEA RGD PMID:14739700 RGD:737695 NCBI chr 3:38,517,803...83,517,803 JBrowse link
Q Anxrr11 Anxiety related response QTL 11 IEA RGD PMID:14739700 RGD:737695 NCBI chr18:30,039,813...75,039,813 JBrowse link
Q Anxrr3 Anxiety related response QTL 3 IEA RGD PMID:14739700 RGD:737695 NCBI chr 2:9,023,519...54,023,519 JBrowse link
Q Anxrr4 Anxiety related response QTL 4 IEA RGD PMID:14739700 RGD:737695 NCBI chr 5:130,130,159...166,875,058 JBrowse link
Q Anxrr5 Anxiety related response QTL 5 IEA RGD PMID:14739700 RGD:737695 NCBI chr 6:84,130,881...129,130,881 JBrowse link
Q Anxrr6 Anxiety related response QTL 6 IEA RGD PMID:14739700 RGD:737695 NCBI chr 7:15,573,889...60,573,889 JBrowse link
Q Anxrr7 Anxiety related response QTL 7 IEA RGD PMID:14739700 RGD:737695 NCBI chr 2:118,189,491...163,189,491 JBrowse link
Q Anxrr8 Anxiety related response QTL 8 IEA RGD PMID:14739700 RGD:737695 NCBI chr 7:46,590,070...91,590,070 JBrowse link
Q Anxrr9 Anxiety related response QTL 9 IEA RGD PMID:14739700 RGD:737695 NCBI chr 8:93,535,351...123,900,184 JBrowse link
Q Btemp1 Thermal response to stress QTL 1 IEA RGD PMID:10679499 RGD:61094 NCBI chr10:35,392,457...63,642,539 JBrowse link
Q Btemp2 Thermal response to stress QTL 2 IEA RGD PMID:10679499 RGD:61094 NCBI chr12:15,025,183...20,794,014 JBrowse link
Q Coreg1 Compensatory renal growth QTL 1 IEA RGD PMID:10732705 RGD:69708 NCBI chr 6:35,691,618...57,730,540 JBrowse link
Q Coreg2 Compensatory renal growth QTL 2 IEA RGD PMID:10864582 RGD:61071 NCBI chr 4:148,423,102...157,580,971 JBrowse link
Q Inf1 Infertility severity QTL 1 IEA RGD PMID:10615258 RGD:631224 NCBI chr 8:22,662,330...67,662,330 JBrowse link
Q Plsm1 Polydactyly-luxate syndrome (PLS) morphotypes QTL 1 IEA RGD PMID:8997636 RGD:632346 NCBI chr 4:1...27,716,890 JBrowse link
Q Plsm2 Polydactyly-luxate syndrome (PLS) morphotypes QTL 2 IEA RGD PMID:8997636 RGD:632346 NCBI chr 4:132,422,778...177,422,778 JBrowse link
Q Plsm3 Polydactyly-luxate syndrome (PLS) morphotypes QTL 3 IEA RGD PMID:8997636 RGD:632346 NCBI chr 7:1...34,000,259 JBrowse link
Q Plsm4 Polydactyly-luxate syndrome (PLS) morphotypes QTL 4 IEA RGD PMID:8997636 RGD:632346 NCBI chr11:54,457,534...86,241,447 JBrowse link
HA/Humd term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Pain1 Pain QTL 1 IEA RGD PMID:17560719 RGD:1643003 NCBI chr 2:26,999,571...48,268,661 JBrowse link
Q Pain2 Pain QTL 2 IEA RGD PMID:17560719 RGD:1643003 NCBI chr 7:9,462,246...98,011,544 JBrowse link
LA/Humd term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Pain1 Pain QTL 1 IEA RGD PMID:17560719 RGD:1643003 NCBI chr 2:26,999,571...48,268,661 JBrowse link
Q Pain2 Pain QTL 2 IEA RGD PMID:17560719 RGD:1643003 NCBI chr 7:9,462,246...98,011,544 JBrowse link
LE/Hkv.AR-Ednrbsl term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Coatc10 Coat color QTL 10 IEA RGD PMID:26796131 RGD:10755346 NCBI chr 7:7,496,499...52,496,499 JBrowse link
Q Coatc11 Coat color QTL 11 IEA RGD PMID:26796131 RGD:10755346 NCBI chr 7:17,944,357...62,944,357 JBrowse link
Q Coatc12 Coat color QTL 12 IEA RGD PMID:26796131 RGD:10755346 NCBI chr 7:31,112,832...76,112,832 JBrowse link
Q Coatc13 Coat color QTL 13 IEA RGD PMID:26796131 RGD:10755346 NCBI chr  X:4,406,000...49,406,000 JBrowse link
Q Coatc14 Coat color QTL 14 IEA RGD PMID:26796131 RGD:10755346 NCBI chr12:1...22,591,684 JBrowse link
Q Coatc15 Coat color QTL 15 IEA RGD PMID:26796131 RGD:10755346 NCBI chr14:19,836,944...64,836,944 JBrowse link
Q Coatc16 Coat color QTL 16 IEA RGD PMID:26796131 RGD:10755346 NCBI chr 3:122,438,700...167,438,700 JBrowse link
Q Coatc6 Coat color QTL 6 IEA RGD PMID:26796131 RGD:10755346 NCBI chr 2:11,591,100...56,591,100 JBrowse link
Q Coatc7 Coat color QTL 7 IEA RGD PMID:26796131 RGD:10755346 NCBI chr 2:30,648,065...75,648,065 JBrowse link
Q Coatc8 Coat color QTL 8 IEA RGD PMID:26796131 RGD:10755346 NCBI chr 2:35,023,117...80,023,117 JBrowse link
Q Coatc9 Coat color QTL 9 IEA RGD PMID:26796131 RGD:10755346 NCBI chr 7:3,529,280...48,529,280 JBrowse link
Q Gdil2 Gastrointestinal dilation QTL 2 IEA RGD PMID:25790447 RGD:10402048 NCBI chr 2:24,903,853...74,786,777 JBrowse link
LEW.1AR1-iddm/Ztm term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Iddm21 Insulin dependent diabetes mellitus QTL 21 IEA RGD PMID:16075370 RGD:1547853
Q Iddm22 Insulin dependent diabetes mellitus QTL 22 IEA RGD PMID:16075370 RGD:1547853 NCBI chr 1:11,835,181...56,835,181 JBrowse link
Q Iddm23 Insulin dependent diabetes mellitus QTL 23 IEA RGD PMID:16075370 RGD:1547853
W-LeprfaNin term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw146 Body weight QTL 146 IEA RGD PMID:24204914 RGD:8657042 NCBI chr 5:108,938,288...153,938,288 JBrowse link
ZUC-LeprfaSte-/- term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Bw124 Body weight QTL 124 IEA RGD PMID:20159938 RGD:7365117
Q Bw125 Body weight QTL 125 IEA RGD PMID:20159938 RGD:7365117
Q Kidm42 Kidney mass QTL 42 IEA RGD PMID:20159938 RGD:7365117
Q Stl32 Serum triglyceride level QTL 32 IEA RGD PMID:20159938 RGD:7365117
Q Uae40 Urinary albumin excretion QTL 40 IEA RGD PMID:20159938 RGD:7365117
Q Uae41 Urinary albumin excretion QTL 41 IEA RGD PMID:20159938 RGD:7365117
Q Uae42 Urinary albumin excretion QTL 42 IEA RGD PMID:20159938 RGD:7365117
Q Uae43 Urinary albumin excretion QTL 43 IEA RGD PMID:20159938 RGD:7365117
Q Uae44 Urinary albumin excretion QTL 44 IEA RGD PMID:20159938 RGD:7365117
Q Uae45 Urinary albumin excretion QTL 45 IEA RGD PMID:20159938 RGD:7365117
Q Uae46 Urinary albumin excretion QTL 46 IEA RGD PMID:20159938 RGD:7365117 NCBI chr 1:201,554,356...246,554,356 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  rat strain 6338
    mutant strain 1238
      (SDxF344)F1 mutants + 4
      ACI mutants + 2
      ACI.FHH-(D1Mit18-D1Rat90)(D14Mit11-D14Rat33)(D14Rat65-D14Rat90)/EurMcwi mutants + 1
      AI/Msik 1
      AMI/Tj 1
      BBDR.BBDP-(D4Mit6-D4Mit7)/RhwMcwi mutants + 4
      BCR/Nn 1
      BDIV mutants + 1
      BDIX.Cg-Tal/NemOda 1
      BN mutants + 47
      BN.ZUC-Leprfa 1
      BRAT-Avpdi/BluHsd + 2
      CVD/Opu 1
      Crl:LE mutants + 25
      DA mutants + 19
      DMY/Kyo 1
      Eker-Tsc2/Hin 1
      F344 mutants + 222
      F344.CVD-Unc5ccvd/Kyo 1
      F344; W-Phf24em6(EGFP)Iexas 1
      FH/HamSlc 1
      FHH mutants + 32
      FHH-Chr 1BN/Mcwi mutants + 4
      FHH-Chr 3BN/Mcwi mutants + 2
      FHH.BN-(D1Hmgc14-D1Hmgc15)/Mcwi mutants + 3
      GRY/Idr 1
      HOB/Snk + 2
      HTX/Kyo 1
      HWY/Slc 1
      HanTac:WH mutants + 1
      KCI/Kyo 1
      KFRS mutants + 9
      KHR mutants + 3
      LA-cp/NRll 1
      LE mutants + 15
      LEA-Tp53tm1(AmCyan1)Ncco 1
      LEC/Crlj 1
      LEC/Hok 1
      LEC/Tj 1
      LEW mutants + 23
      LEW.1WR1-Ifnar1em1 1
      LEW.1WR1-Ifnar1em2 1
      LH mutants + 1
      MPOD/Kyo 1
      MPR/Iar 1
      MWF-mutant 0
      NAR/Slc 1
      NP (ZFN) mutants + 3
      ODURM/Odu 1
      OP/Jtt 1
      PCK-Pkhd1pck/CrljCrl + 2
      PD mutants + 1
      PKD/Mhm 1
      PL/Iet 1
      RDW/UmeSlc 1
      SD mutants + 180
      SDR/Slc 1
      SERC/Kyo 1
      SHR mutants + 17
      SHRSP mutant + 4
      SPRD-Anks6PKD/Rrrc 1
      SPRD-AnksPKD/Fsn 1
      SS mutants + 400
      SS-Chr 5BN mutants + 5
      SS-ROSA26em1(SB11)Mcwi 1
      SS.BN mutants + 12
      STOCK-Tp53tm1(EGFP-Pac)Qly/Rrrc 1
      Sl + 18
      T2DN/Mcwi mutants + 3
      TCR/Ibu 1
      TM/Kyo mutants + 1
      TT/Sgn 1
      Taiep/Dun 1
      W mutants + 56
      W;Cg-Acrtm1Osb 1
      WAG-F8m1Ycb 1
      WAG-mutant 0
      WDB mutants + 4
      WDF-Leprm1Rll 1
      WIAR.MPR-Arsbabd/Ncchd 1
      WKAH.LEC-Atp7bhts/Tj 1
      WKY mutants + 14
      WT/Jtt 1
      WTC-Kcnq1dfkKyo 1
      WTC-furue/Kyo 1
      WTC-swh/Kyo 1
      WUN-Abcc2TR-/HsdRrrc 1
      Wild mutants + 0
      ZDF mutants + 3
      ZI/Kyo + 2
      Zucker mutants + 17
      chromosome 13 mutant + 34
      coisogenic strain + 37
paths to the root