PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html ).
Term: hepatitis C pathway
Accession: PW:0001055
browse the term
Definition: The hepatitis C virus is the causative agent of hepatitis C, a chronic liver disease in humans. The virus interferes with several signaling and regulatory pathways in the host cells.
Synonyms: exact_synonym: NANBH pathway; Viral hepatitis C pathway; chronic hepatitis C pathway; hepatitis C infection pathway; hepatitis C virus infection pathway; hepatitis nonA nonB pathway
related_synonym: KEGG:05160
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Akt1
AKT serine/threonine kinase 1
IEA
KEGG
rno:05160
NCBI chr 6:137,534,810...137,555,131
Ensembl chr 6:137,535,390...137,552,610
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Akt2
AKT serine/threonine kinase 2
IEA
KEGG
rno:05160
NCBI chr 1:92,004,705...92,061,420
Ensembl chr 1:92,014,859...92,061,420
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Akt3
AKT serine/threonine kinase 3
IEA
KEGG
rno:05160
NCBI chr13:91,475,839...91,758,060
Ensembl chr13:91,475,839...91,748,020
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Bad
BCL2-associated agonist of cell death
IEA
KEGG
rno:05160
NCBI chr 1:213,562,719...213,572,034
Ensembl chr 1:213,562,187...213,572,034
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Braf
B-Raf proto-oncogene, serine/threonine kinase
IEA
KEGG
rno:05160
NCBI chr 4:69,329,772...69,476,931
Ensembl chr 4:69,342,813...69,476,931
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Cd81
Cd81 molecule
IEA
KEGG
rno:05160
NCBI chr 1:207,665,274...207,681,094
Ensembl chr 1:207,664,885...207,681,092
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Cdkn1a
cyclin-dependent kinase inhibitor 1A
IEA
KEGG
rno:05160
NCBI chr20:7,150,820...7,161,373
Ensembl chr20:7,153,958...7,164,969
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Chuk
component of inhibitor of nuclear factor kappa B kinase complex
IEA
KEGG
rno:05160
NCBI chr 1:252,908,748...252,944,273
Ensembl chr 1:252,908,749...252,944,273
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Cldn1
claudin 1
IEA
KEGG
rno:05160
NCBI chr11:87,926,376...87,941,533
Ensembl chr11:87,926,337...87,941,529
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Cldn10
claudin 10
IEA
KEGG
rno:05160
NCBI chr15:102,269,858...102,361,589
Ensembl chr15:102,269,858...102,361,589
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Cldn11
claudin 11
IEA
KEGG
rno:05160
NCBI chr 2:114,136,234...114,149,539
Ensembl chr 2:114,136,234...114,149,539
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Cldn14
claudin 14
IEA
KEGG
rno:05160
NCBI chr11:46,701,940...46,799,049
Ensembl chr11:46,701,940...46,799,096
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Cldn15
claudin 15
IEA
KEGG
rno:05160
NCBI chr12:25,334,849...25,345,104
Ensembl chr12:25,334,849...25,343,477
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Cldn16
claudin 16
IEA
KEGG
rno:05160
NCBI chr11:87,795,106...87,814,396
Ensembl chr11:87,795,106...87,814,396
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Cldn17
claudin 17
IEA
KEGG
rno:05160
NCBI chr11:41,313,675...41,314,851
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Cldn18
claudin 18
IEA
KEGG
rno:05160
NCBI chr 8:109,125,819...109,145,110
Ensembl chr 8:109,126,949...109,152,701
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Cldn19
claudin 19
IEA
KEGG
rno:05160
NCBI chr 5:138,148,234...138,155,672
Ensembl chr 5:138,148,501...138,155,666
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Cldn2
claudin 2
IEA
KEGG
rno:05160
NCBI chr X:108,248,383...108,258,847
Ensembl chr X:108,237,676...108,262,377
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Cldn20
claudin 20
IEA
KEGG
rno:05160
NCBI chr 1:46,539,039...46,539,698
Ensembl chr 1:46,536,236...46,540,949
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Cldn22
claudin 22
IEA
KEGG
rno:05160
NCBI chr16:51,155,058...51,156,084
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Cldn23
claudin 23
IEA
KEGG
rno:05160
NCBI chr16:63,117,045...63,118,769
Ensembl chr16:63,116,781...63,118,957
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Cldn3
claudin 3
IEA
KEGG
rno:05160
NCBI chr12:27,345,075...27,346,547
Ensembl chr12:27,345,076...27,348,841
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Cldn4
claudin 4
IEA
KEGG
rno:05160
NCBI chr12:27,388,160...27,389,958
Ensembl chr12:27,387,981...27,389,958
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Cldn5
claudin 5
IEA
KEGG
rno:05160
NCBI chr11:95,717,172...95,718,598
Ensembl chr11:95,717,176...95,719,322
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Cldn6
claudin 6
IEA
KEGG
rno:05160
NCBI chr10:13,213,837...13,218,578
Ensembl chr10:13,213,956...13,218,581
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Cldn7
claudin 7
IEA
KEGG
rno:05160
NCBI chr10:55,188,670...55,190,871
Ensembl chr10:55,188,684...55,190,905
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Cldn8
claudin 8
IEA
KEGG
rno:05160
NCBI chr11:41,362,081...41,364,330
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Cldn9
claudin 9
IEA
KEGG
rno:05160
NCBI chr10:13,218,728...13,220,159
Ensembl chr10:13,218,729...13,220,178
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Egf
epidermal growth factor
IEA
KEGG
rno:05160
NCBI chr 2:220,893,660...220,976,331
Ensembl chr 2:220,893,660...220,976,297
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Egfr
epidermal growth factor receptor
IEA
KEGG
rno:05160
NCBI chr14:95,378,626...95,551,358
Ensembl chr14:95,378,626...95,551,358
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Eif2ak1
eukaryotic translation initiation factor 2 alpha kinase 1
IEA
KEGG
rno:05160
NCBI chr12:15,824,431...15,858,266
Ensembl chr12:15,825,124...15,858,281
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Eif2ak2
eukaryotic translation initiation factor 2-alpha kinase 2
IEA
KEGG
rno:05160
NCBI chr 6:21,941,147...21,977,115
Ensembl chr 6:21,952,631...21,977,116
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Eif2ak3
eukaryotic translation initiation factor 2 alpha kinase 3
IEA
KEGG
rno:05160
NCBI chr 4:104,363,838...104,425,271
Ensembl chr 4:104,363,833...104,425,268
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Eif2ak4
eukaryotic translation initiation factor 2 alpha kinase 4
IEA
KEGG
rno:05160
NCBI chr 3:125,810,207...125,895,574
Ensembl chr 3:125,810,060...125,895,574
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Eif2s1
eukaryotic translation initiation factor 2 subunit alpha
IEA
KEGG
rno:05160
NCBI chr 6:103,405,880...103,430,549
Ensembl chr 6:103,405,788...103,431,649
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Eif3e
eukaryotic translation initiation factor 3 subunit E
IEA
KEGG
rno:05160
NCBI chr 7:76,224,567...76,257,346
Ensembl chr 7:76,224,568...76,257,785
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Grb2
growth factor receptor bound protein 2
IEA
KEGG
rno:05160
NCBI chr10:101,380,354...101,448,138
Ensembl chr10:101,380,356...101,448,138
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Gsk3b
glycogen synthase kinase 3 beta
IEA
KEGG
rno:05160
NCBI chr11:76,004,502...76,154,665
Ensembl chr11:76,009,507...76,153,249
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Hras
HRas proto-oncogene, GTPase
IEA
KEGG
rno:05160
NCBI chr 1:205,712,625...205,729,406
Ensembl chr 1:205,725,975...205,729,590
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Ifit1
interferon-induced protein with tetratricopeptide repeats 1
IEA
KEGG
rno:05160
NCBI chr 1:241,565,197...241,567,262
Ensembl chr 1:241,543,184...241,568,148
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Ifit1bl
interferon-induced protein with tetratricopeptide repeats 1B-like
IEA
KEGG
rno:05160
NCBI chr 1:241,535,776...241,580,476
Ensembl chr 1:241,535,145...241,580,516
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Ifna1
interferon, alpha 1
IEA
KEGG
rno:05160
NCBI chr 5:108,143,240...108,143,809
Ensembl chr 5:108,143,240...108,143,809
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Ifna2
interferon alpha 2
IEA
KEGG
rno:05160
NCBI chr 5:108,374,363...108,374,941
Ensembl chr 5:108,374,363...108,374,941
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Ifna4
interferon, alpha 4
IEA
KEGG
rno:05160
NCBI chr 5:108,115,064...108,116,010
Ensembl chr 5:108,115,064...108,116,010
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Ifna4l1
interferon, alpha 4 like 1
IEA
KEGG
rno:05160
NCBI chr 5:108,640,546...108,641,115
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Ifna5
interferon, alpha 5
IEA
KEGG
rno:05160
NCBI chr 5:108,233,736...108,234,314
Ensembl chr 5:108,233,736...108,234,314
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Ifnar1
interferon alpha and beta receptor subunit 1
IEA
KEGG
rno:05160
NCBI chr11:44,211,769...44,238,206
Ensembl chr11:44,211,845...44,238,205
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Ifnb1
interferon beta 1
IEA
KEGG
rno:05160
NCBI chr 5:108,066,650...108,067,487
Ensembl chr 5:108,066,650...108,067,487
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Ikbkb
inhibitor of nuclear factor kappa B kinase subunit beta
IEA
KEGG
rno:05160
NCBI chr16:76,021,968...76,075,717
Ensembl chr16:76,022,008...76,081,911
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Ikbke
inhibitor of nuclear factor kappa B kinase subunit epsilon
IEA
KEGG
rno:05160
NCBI chr13:45,264,404...45,290,737
Ensembl chr13:45,264,412...45,289,396
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Ikbkg
inhibitor of nuclear factor kappa B kinase regulatory subunit gamma
IEA
KEGG
rno:05160
NCBI chr X:157,358,279...157,397,563
Ensembl chr X:157,367,639...157,392,757
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Irf1
interferon regulatory factor 1
IEA
KEGG
rno:05160
NCBI chr10:38,417,935...38,424,946
Ensembl chr10:38,417,148...38,424,947
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Irf3
interferon regulatory factor 3
IEA
KEGG
rno:05160
NCBI chr 1:104,616,608...104,621,402
Ensembl chr 1:104,616,469...104,621,401
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Irf7
interferon regulatory factor 7
IEA
KEGG
rno:05160
NCBI chr 1:205,796,956...205,800,543
Ensembl chr 1:205,796,959...205,800,023
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Irf9
interferon regulatory factor 9
IEA
KEGG
rno:05160
NCBI chr15:33,065,422...33,071,881
Ensembl chr15:33,065,659...33,071,879
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Jak1
Janus kinase 1
IEA
KEGG
rno:05160
NCBI chr 5:120,895,606...121,004,207
Ensembl chr 5:120,896,046...120,996,758
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Kras
KRAS proto-oncogene, GTPase
IEA
KEGG
rno:05160
NCBI chr 4:179,916,255...179,949,613
Ensembl chr 4:179,919,802...179,949,320
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Ldlr
low density lipoprotein receptor
IEA
KEGG
rno:05160
NCBI chr 8:28,546,191...28,569,075
Ensembl chr 8:28,546,146...28,570,675
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Mapk1
mitogen activated protein kinase 1
IEA
KEGG
rno:05160
NCBI chr11:97,462,025...97,529,193
Ensembl chr11:97,462,025...97,527,825
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Mapk10
mitogen activated protein kinase 10
IEA
KEGG
rno:05160
NCBI chr14:6,802,247...7,094,103
Ensembl chr14:6,802,295...7,094,100
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Mapk11
mitogen-activated protein kinase 11
IEA
KEGG
rno:05160
NCBI chr 7:122,098,120...122,105,023
Ensembl chr 7:122,098,121...122,105,038
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Mapk12
mitogen-activated protein kinase 12
IEA
KEGG
rno:05160
NCBI chr 7:122,085,647...122,096,307
Ensembl chr 7:122,085,913...122,096,307
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Mapk13
mitogen activated protein kinase 13
IEA
KEGG
rno:05160
NCBI chr20:6,836,979...6,847,197
Ensembl chr20:6,837,013...6,847,191
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Mapk14
mitogen activated protein kinase 14
IEA
KEGG
rno:05160
NCBI chr20:6,751,288...6,812,294
Ensembl chr20:6,751,357...6,812,294
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Mapk3
mitogen activated protein kinase 3
IEA
KEGG
rno:05160
NCBI chr 1:190,797,189...190,803,411
Ensembl chr 1:190,797,185...190,803,411
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Mapk8
mitogen-activated protein kinase 8
IEA
KEGG
rno:05160
NCBI chr16:8,645,171...8,728,225
Ensembl chr16:8,645,198...8,728,427
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Mapk9
mitogen-activated protein kinase 9
IEA
KEGG
rno:05160
NCBI chr10:34,670,750...34,711,972
Ensembl chr10:34,670,756...34,712,228
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Mavs
mitochondrial antiviral signaling protein
IEA
KEGG
rno:05160
NCBI chr 3:138,904,673...138,919,129
Ensembl chr 3:138,904,771...138,919,126
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Nfkb1
nuclear factor kappa B subunit 1
IEA
KEGG
rno:05160
NCBI chr 2:226,689,745...226,805,897
Ensembl chr 2:226,689,745...226,783,088
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Nfkbia
NFKB inhibitor alpha
IEA
KEGG
rno:05160
NCBI chr 6:78,593,844...78,597,307
Ensembl chr 6:78,593,847...78,597,072
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Nr1h3
nuclear receptor subfamily 1, group H, member 3
IEA
KEGG
rno:05160
NCBI chr 3:97,614,616...97,632,053
Ensembl chr 3:97,614,616...97,624,532
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Nras
NRAS proto-oncogene, GTPase
IEA
KEGG
rno:05160
NCBI chr 2:193,271,399...193,282,023
Ensembl chr 2:193,271,430...193,278,543
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Oas1a
2'-5' oligoadenylate synthetase 1A
IEA
KEGG
rno:05160
NCBI chr12:41,330,423...41,341,130
Ensembl chr12:41,285,211...41,341,128
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Oas1b
2-5 oligoadenylate synthetase 1B
IEA
KEGG
rno:05160
NCBI chr12:41,385,184...41,395,891
Ensembl chr12:41,384,678...41,395,914
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Oas2
2'-5' oligoadenylate synthetase 2
IEA
KEGG
rno:05160
NCBI chr12:41,464,568...41,492,036
Ensembl chr12:41,467,315...41,495,881
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Oas3
2'-5'-oligoadenylate synthetase 3
IEA
KEGG
rno:05160
NCBI chr12:41,439,645...41,463,392
Ensembl chr12:41,439,643...41,464,420
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Ocln
occludin
IEA
KEGG
rno:05160
NCBI chr 2:33,391,303...33,442,207
Ensembl chr 2:33,391,303...33,430,411
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Pdk1
pyruvate dehydrogenase kinase 1
IEA
KEGG
rno:05160
NCBI chr 3:77,113,464...77,144,145
Ensembl chr 3:77,113,473...77,144,145
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Pias1
protein inhibitor of activated STAT, 1
IEA
KEGG
rno:05160
NCBI chr 8:72,233,566...72,347,085
Ensembl chr 8:72,233,566...72,334,315
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Pias2
protein inhibitor of activated STAT, 2
IEA
KEGG
rno:05160
NCBI chr18:72,883,008...72,989,486
Ensembl chr18:72,882,890...73,006,662
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Pias3
protein inhibitor of activated STAT, 3
IEA
KEGG
rno:05160
NCBI chr 2:186,921,384...186,930,292
Ensembl chr 2:186,921,428...186,936,714
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Pias4
protein inhibitor of activated STAT, 4
IEA
KEGG
rno:05160
NCBI chr 7:9,197,032...9,210,557
Ensembl chr 7:9,196,896...9,210,527
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Pik3ca
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha
IEA
KEGG
rno:05160
NCBI chr 2:117,103,643...117,177,411
Ensembl chr 2:117,143,468...117,177,411
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Pik3cb
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
IEA
KEGG
rno:05160
NCBI chr 8:108,474,017...108,579,140
Ensembl chr 8:108,474,019...108,579,331
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Pik3cd
phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta
IEA
KEGG
rno:05160
NCBI chr 5:165,377,994...165,426,620
Ensembl chr 5:165,377,994...165,403,968
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Pik3r1
phosphoinositide-3-kinase regulatory subunit 1
IEA
KEGG
rno:05160
NCBI chr 2:34,612,946...34,697,660
Ensembl chr 2:34,612,946...34,626,347
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Pik3r2
phosphoinositide-3-kinase regulatory subunit 2
IEA
KEGG
rno:05160
NCBI chr16:18,699,389...18,708,045
Ensembl chr16:18,699,448...18,709,665
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Pik3r3
phosphoinositide-3-kinase regulatory subunit 3
IEA
KEGG
rno:05160
NCBI chr 5:134,936,790...135,009,303
Ensembl chr 5:134,934,857...135,007,762
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Pik3r5
phosphoinositide-3-kinase, regulatory subunit 5
IEA
KEGG
rno:05160
NCBI chr10:53,631,469...53,699,550
Ensembl chr10:53,631,476...53,699,539
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Ppara
peroxisome proliferator activated receptor alpha
IEA
KEGG
rno:05160
NCBI chr 7:118,712,261...118,780,723
Ensembl chr 7:118,712,412...118,780,714
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Ppp2ca
protein phosphatase 2 catalytic subunit alpha
IEA
KEGG
rno:05160
NCBI chr10:36,856,534...36,878,789
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Ppp2cb
protein phosphatase 2 catalytic subunit beta
IEA
KEGG
rno:05160
NCBI chr16:65,261,178...65,282,658
Ensembl chr16:65,261,181...65,282,634
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Ppp2r1a
protein phosphatase 2 scaffold subunit A alpha
IEA
KEGG
rno:05160
NCBI chr 1:69,213,198...69,232,441
Ensembl chr 1:69,213,038...69,238,242
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Ppp2r1b
protein phosphatase 2 scaffold subunit A beta
IEA
KEGG
rno:05160
NCBI chr 8:60,092,540...60,125,512
Ensembl chr 8:60,081,553...60,125,795
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Ppp2r2a
protein phosphatase 2, regulatory subunit B, alpha
IEA
KEGG
rno:05160
NCBI chr15:45,380,142...45,439,428
Ensembl chr15:45,379,683...45,439,405
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Ppp2r2b
protein phosphatase 2, regulatory subunit B, beta
IEA
KEGG
rno:05160
NCBI chr18:34,904,686...35,357,299
Ensembl chr18:34,904,686...35,356,977
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Ppp2r2c
protein phosphatase 2, regulatory subunit B, gamma
IEA
KEGG
rno:05160
NCBI chr14:78,071,274...78,156,212
Ensembl chr14:78,071,274...78,156,212
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Ppp2r2d
protein phosphatase 2, regulatory subunit B, delta
IEA
KEGG
rno:05160
NCBI chr 1:203,095,536...203,129,895
Ensembl chr 1:203,095,531...203,129,893
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Psme3
proteasome activator subunit 3
IEA
KEGG
rno:05160
NCBI chr10:86,757,933...86,765,719
Ensembl chr10:86,757,899...86,818,033
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Raf1
Raf-1 proto-oncogene, serine/threonine kinase
IEA
KEGG
rno:05160
NCBI chr 4:150,352,158...150,412,813
Ensembl chr 4:150,352,160...150,412,813
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Rela
RELA proto-oncogene, NF-kB subunit
IEA
KEGG
rno:05160
NCBI chr 1:212,354,336...212,364,815
Ensembl chr 1:212,333,035...212,364,817
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Rig1
RNA sensor RIG-1
IEA
KEGG
rno:05160
NCBI chr 5:60,117,398...60,165,995
Ensembl chr 5:60,117,398...60,165,995
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Ripk1
receptor interacting serine/threonine kinase 1
IEA
KEGG
rno:05160
NCBI chr17:31,044,983...31,077,167
Ensembl chr17:31,044,994...31,077,167
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Rnasel
ribonuclease L
IEA
KEGG
rno:05160
NCBI chr13:68,446,641...68,460,804
Ensembl chr13:68,446,882...68,459,557
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Rxra
retinoid X receptor alpha
IEA
KEGG
rno:05160
NCBI chr 3:31,387,892...31,474,415
Ensembl chr 3:31,388,223...31,474,417
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Scarb1
scavenger receptor class B, member 1
IEA
KEGG
rno:05160
NCBI chr12:36,957,302...37,023,982
Ensembl chr12:36,957,496...37,023,980
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Socs3
suppressor of cytokine signaling 3
IEA
KEGG
rno:05160
NCBI chr10:103,692,579...103,695,975
Ensembl chr10:103,690,976...103,704,825
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Sos1
SOS Ras/Rac guanine nucleotide exchange factor 1
IEA
KEGG
rno:05160
NCBI chr 6:20,286,117...20,363,350
Ensembl chr 6:20,286,117...20,363,350
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Sos2
SOS Ras/Rho guanine nucleotide exchange factor 2
IEA
KEGG
rno:05160
NCBI chr 6:93,778,971...93,892,161
Ensembl chr 6:93,778,971...93,892,811
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Stat1
signal transducer and activator of transcription 1
IEA
KEGG
rno:05160
NCBI chr 9:56,911,522...56,951,926
Ensembl chr 9:56,911,523...57,077,346
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Stat2
signal transducer and activator of transcription 2
IEA
KEGG
rno:05160
NCBI chr 7:1,287,025...1,302,858
Ensembl chr 7:1,287,024...1,303,459
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Stat3
signal transducer and activator of transcription 3
IEA
KEGG
rno:05160
NCBI chr10:86,311,528...86,363,513
Ensembl chr10:86,311,535...86,363,359
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Tbk1
TANK-binding kinase 1
IEA
KEGG
rno:05160
NCBI chr 7:58,963,319...58,996,357
Ensembl chr 7:58,963,325...58,996,357
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Tlr3
toll-like receptor 3
IEA
KEGG
rno:05160
NCBI chr16:53,554,916...53,572,321
Ensembl chr16:53,555,131...53,568,385
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Tnf
tumor necrosis factor
IEA
KEGG
rno:05160
NCBI chr20:3,626,685...3,629,303
Ensembl chr20:3,626,532...3,629,303
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Tnfrsf1a
TNF receptor superfamily member 1A
IEA
KEGG
rno:05160
NCBI chr 4:159,837,119...159,849,817
Ensembl chr 4:159,837,032...159,849,816
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Tp53
tumor protein p53
IEA
KEGG
rno:05160
NCBI chr10:54,798,871...54,810,300
Ensembl chr10:54,798,851...54,810,299
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Tradd
TNFRSF1A-associated via death domain
IEA
KEGG
rno:05160
NCBI chr19:50,046,057...50,048,158
Ensembl chr19:50,046,061...50,052,550
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Traf2
Tnf receptor-associated factor 2
IEA
KEGG
rno:05160
NCBI chr 3:28,740,098...28,764,752
Ensembl chr 3:28,740,098...28,764,691
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Traf3
Tnf receptor-associated factor 3
IEA
KEGG
rno:05160
NCBI chr 6:136,025,097...136,128,363
Ensembl chr 6:136,027,157...136,128,363
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Traf6
TNF receptor associated factor 6
IEA
KEGG
rno:05160
NCBI chr 3:108,418,537...108,443,330
Ensembl chr 3:108,418,513...108,443,328
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all