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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:cell adhesion signaling pathway
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Accession:PW:0000648 term browser browse the term
Definition:Cell adhesion signaling pathway conveys information between cells or between cells and the extracellular matrix (ECM) using cell adhesion molecules (CAMs). While many CAMs appear to be specialized for either cell-cell or cell-ECM communication, integrin family of receptors mediates both types of signaling.


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altered ephrin - ephrin receptor bidirectional signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efna1 ephrin A1 ISS Present in gastrointestinal, liver and kidney cancers. RGD PMID:15561600 RGD:1304509 NCBI chr 2:188,588,808...188,596,156
Ensembl chr 2:188,588,796...188,596,222
JBrowse link
G Efna2 ephrin A2 ISS RGD PMID:15561600 RGD:1304509 NCBI chr 7:12,382,636...12,393,266
Ensembl chr 7:12,382,636...12,393,266
JBrowse link
G Efna3 ephrin A3 ISS Present in neurobalstoma, neural cancers and leukemia. RGD PMID:15561600 RGD:1304509 NCBI chr 2:188,636,304...188,645,302
Ensembl chr 2:188,637,852...188,645,196
JBrowse link
G Efnb1 ephrin B1 ISS Present in neuroblastoma, leukemia and lung cancer RGD PMID:15561600 RGD:1304509 NCBI chr  X:68,891,227...68,904,034
Ensembl chr  X:68,891,227...68,904,038
JBrowse link
G Efnb3 ephrin B3 ISS Present in neuroblastomas and neural cancers RGD PMID:15561600 RGD:1304509 NCBI chr10:56,161,431...56,168,819
Ensembl chr10:56,161,432...56,167,426
JBrowse link
G Epha3 Eph receptor A3 ISS Present in neuroblastomas, neural cancers, leukemias and lymphomas. RGD PMID:15561600 RGD:1304509 NCBI chr11:421,253...783,037
Ensembl chr11:421,135...782,954
JBrowse link
G Epha7 Eph receptor A7 ISS RGD PMID:15561600 RGD:1304509 NCBI chr 5:43,602,744...43,761,198
Ensembl chr 5:43,603,043...43,757,549
JBrowse link
altered integrin mediated signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ilk integrin-linked kinase ISO RGD PMID:18772397 RGD:5490966 NCBI chr 1:170,578,941...170,585,192
Ensembl chr 1:170,578,889...170,585,189
JBrowse link
G Itga1 integrin subunit alpha 1 IMP RGD PMID:10536667 RGD:1302875 NCBI chr 2:47,127,403...47,281,387
Ensembl chr 2:47,127,219...47,281,421
JBrowse link
G Itga11 integrin subunit alpha 11 ISO RGD PMID:18772397 RGD:5490966 NCBI chr 8:67,566,874...67,683,973
Ensembl chr 8:67,615,635...67,683,973
JBrowse link
G Itga4 integrin subunit alpha 4 IMP
ISO
RGD PMID:11782963, PMID:18772397 RGD:1302879, RGD:5490966 NCBI chr 3:66,178,745...66,265,547
Ensembl chr 3:66,193,059...66,263,960
JBrowse link
G Itga5 integrin subunit alpha 5 ISS RGD PMID:10536667 RGD:1302875 NCBI chr 7:144,970,444...144,993,652
Ensembl chr 7:144,970,444...144,993,652
JBrowse link
G Itga8 integrin subunit alpha 8 IMP RGD PMID:10504498 RGD:633055 NCBI chr17:79,321,893...79,676,927
Ensembl chr17:79,321,900...79,676,499
JBrowse link
G Itga9 integrin subunit alpha 9 ISO RGD PMID:18772397 RGD:5490966 NCBI chr 8:127,271,029...127,576,709
Ensembl chr 8:127,271,289...127,572,988
JBrowse link
G Itgb1 integrin subunit beta 1 ISS RGD PMID:9633916 RGD:1302874 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
altered Notch signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll1 delta like canonical Notch ligand 1 ISS paper on the human protein which may be involved in disease RGD PMID:10079256 RGD:1304492 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
G Dll3 delta like canonical Notch ligand 3 ISS paper mentions mutations and diseases, deletion in mice RGD PMID:12141422 RGD:1304493 NCBI chr 1:85,485,875...85,493,683
Ensembl chr 1:85,485,289...85,493,685
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 ISS RGD PMID:12548545 RGD:1334460 NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
JBrowse link
G Jag1 jagged canonical Notch ligand 1 ISS RGD PMID:10964583 RGD:1304484 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Jag2 jagged canonical Notch ligand 2 ISS RGD PMID:10079256 RGD:1304492 NCBI chr 6:137,711,144...137,733,331
Ensembl chr 6:137,711,155...137,733,026
JBrowse link
G Notch1 notch receptor 1 ISS RGD PMID:11900468 RGD:724389 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Notch4 notch receptor 4 ISS RGD PMID:10964583 RGD:1304484 NCBI chr20:4,329,794...4,353,868
Ensembl chr20:4,329,811...4,353,785
JBrowse link
G Numb NUMB, endocytic adaptor protein ISS RGD PMID:15492044 RGD:1334451 NCBI chr 6:107,279,917...107,325,345
Ensembl chr 6:107,279,920...107,325,345
JBrowse link
G Pofut1 protein O-fucosyltransferase 1 ISS RGD PMID:14570055 RGD:1334453 NCBI chr 3:148,722,864...148,749,743
Ensembl chr 3:148,722,955...148,747,208
JBrowse link
altered Notch signaling pathway involving promoters term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 ISS RGD PMID:12548545 RGD:1334460 NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
JBrowse link
altered Notch signaling pathway involving the macromolecules modifying the main players term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Numb NUMB, endocytic adaptor protein ISS In humans, loss of Numb regulation over Notch is involved in breast cancer. RGD PMID:15492044 RGD:1334451 NCBI chr 6:107,279,917...107,325,345
Ensembl chr 6:107,279,920...107,325,345
JBrowse link
G Pofut1 protein O-fucosyltransferase 1 ISS RGD PMID:14570055 RGD:1334453 NCBI chr 3:148,722,864...148,749,743
Ensembl chr 3:148,722,955...148,747,208
JBrowse link
G Psen2 presenilin 2 ISO C. elegans transgenics expressing human wild-type and mutant PSEN2 RGD PMID:16474849 RGD:2302525 NCBI chr13:98,513,600...98,539,347
Ensembl chr13:98,513,570...98,530,724
JBrowse link
altered Notch signaling pathway involving the main players term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll3 delta like canonical Notch ligand 3 ISS RGD PMID:12141422 RGD:1304493 NCBI chr 1:85,485,875...85,493,683
Ensembl chr 1:85,485,289...85,493,685
JBrowse link
G Jag1 jagged canonical Notch ligand 1 ISS RGD PMID:15057910 RGD:1334443 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Notch1 notch receptor 1 ISS RGD PMID:15472075 RGD:1334450 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Notch3 notch receptor 3 ISS RGD PMID:14667809 RGD:1334442 NCBI chr 7:14,138,495...14,189,688
Ensembl chr 7:14,138,495...14,189,688
JBrowse link
cadherin mediated signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 IMP RGD PMID:16515795 RGD:1582675 NCBI chr18:8,146,971...8,366,037
Ensembl chr18:8,146,971...8,360,684
JBrowse link
cell-extracellular matrix signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin IEA KEGG rno:04512 NCBI chr 5:173,589,910...173,622,813
Ensembl chr 5:173,589,819...173,622,645
JBrowse link
G Cd36 CD36 molecule IEA KEGG rno:04512 NCBI chr 4:14,150,309...14,191,498
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Cd44 CD44 molecule (Indian blood group) IEA KEGG rno:04512 NCBI chr 3:92,695,083...92,783,820
Ensembl chr 3:92,696,313...92,783,658
JBrowse link
G Cd47 Cd47 molecule IEA KEGG rno:04512 NCBI chr11:53,511,485...53,575,754
Ensembl chr11:53,514,595...53,575,175
JBrowse link
G Chad chondroadherin IEA KEGG rno:04512 NCBI chr10:82,290,296...82,296,146
Ensembl chr10:82,292,110...82,296,651
JBrowse link
G Col11a1 collagen type XI alpha 1 chain IEA KEGG rno:04512 NCBI chr 2:216,863,423...217,056,523
Ensembl chr 2:216,863,428...217,056,523
JBrowse link
G Col11a2 collagen type XI alpha 2 chain IEA KEGG rno:04512 NCBI chr20:3,829,324...3,859,022
Ensembl chr20:3,830,164...3,859,018
JBrowse link
G Col1a1 collagen type I alpha 1 chain IEA KEGG rno:04512 NCBI chr10:82,745,801...82,762,790
Ensembl chr10:82,745,801...82,762,789
JBrowse link
G Col1a2 collagen type I alpha 2 chain IEA KEGG rno:04512 NCBI chr 4:31,534,225...31,569,152
Ensembl chr 4:31,534,225...31,569,151
JBrowse link
G Col2a1 collagen type II alpha 1 chain IEA KEGG rno:04512 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Col3a1 collagen type III alpha 1 chain IEA KEGG rno:04512 NCBI chr 9:52,023,295...52,059,221
Ensembl chr 9:52,023,295...52,059,217
JBrowse link
G Col4a1 collagen type IV alpha 1 chain IEA KEGG rno:04512 NCBI chr16:83,522,162...83,632,153
Ensembl chr16:83,522,162...83,632,153
JBrowse link
G Col4a2 collagen type IV alpha 2 chain IEA KEGG rno:04512 NCBI chr16:83,386,388...83,522,169
Ensembl chr16:83,387,364...83,438,561
JBrowse link
G Col4a5 collagen type IV alpha 5 chain IEA KEGG rno:04512 NCBI chr  X:112,769,595...112,983,720
Ensembl chr  X:112,769,645...112,983,685
JBrowse link
G Col5a1 collagen type V alpha 1 chain IEA KEGG rno:04512 NCBI chr 3:6,430,180...6,581,010
Ensembl chr 3:6,430,201...6,578,882
JBrowse link
G Col5a2 collagen type V alpha 2 chain IEA KEGG rno:04512 NCBI chr 9:52,091,088...52,238,735
Ensembl chr 9:52,092,511...52,238,564
JBrowse link
G Col5a3 collagen type V alpha 3 chain IEA KEGG rno:04512 NCBI chr 8:21,786,324...21,831,751
Ensembl chr 8:21,786,324...21,831,668
JBrowse link
G Col6a1 collagen type VI alpha 1 chain IEA KEGG rno:04512 NCBI chr20:12,657,913...12,676,370
Ensembl chr20:12,658,065...12,675,561
JBrowse link
G Col6a2 collagen type VI alpha 2 chain IEA KEGG rno:04512 NCBI chr20:12,773,472...12,801,179
Ensembl chr20:12,773,427...12,801,180
JBrowse link
G Col6a3 collagen type VI alpha 3 chain IEA KEGG rno:04512 NCBI chr 9:97,926,784...98,004,643
Ensembl chr 9:97,926,787...98,004,546
JBrowse link
G Col6a6 collagen type VI alpha 6 chain IEA KEGG rno:04512 NCBI chr 8:114,352,130...114,449,993
Ensembl chr 8:114,353,825...114,449,956
JBrowse link
G Comp cartilage oligomeric matrix protein IEA KEGG rno:04512 NCBI chr16:20,798,437...20,807,070
Ensembl chr16:20,798,437...20,807,070
JBrowse link
G Dag1 dystroglycan 1 IEA KEGG rno:04512 NCBI chr 8:116,980,501...116,993,182
Ensembl chr 8:116,980,497...116,993,193
JBrowse link
G Fn1 fibronectin 1 IEA KEGG rno:04512 NCBI chr 9:78,900,111...78,969,018
Ensembl chr 9:78,900,103...78,969,078
JBrowse link
G Gp1ba glycoprotein Ib platelet subunit alpha IEA KEGG rno:04512 NCBI chr10:57,260,680...57,263,546
Ensembl chr10:57,260,680...57,263,546
JBrowse link
G Gp1bb glycoprotein Ib platelet subunit beta IEA KEGG rno:04512 NCBI chr11:86,520,992...86,522,169
Ensembl chr11:86,520,992...86,522,169
JBrowse link
G Gp5 glycoprotein V (platelet) IEA KEGG rno:04512 NCBI chr11:73,015,380...73,017,570 JBrowse link
G Gp9 glycoprotein IX (platelet) IEA KEGG rno:04512 NCBI chr 4:119,680,671...119,682,006
Ensembl chr 4:119,680,112...119,682,547
JBrowse link
G Hmmr hyaluronan-mediated motility receptor IEA KEGG rno:04512 NCBI chr10:25,861,490...25,890,639
Ensembl chr10:25,861,490...25,890,639
JBrowse link
G Ibsp integrin-binding sialoprotein IEA KEGG rno:04512 NCBI chr14:6,801,200...6,813,987
Ensembl chr14:6,801,204...6,813,945
JBrowse link
G Itga1 integrin subunit alpha 1 IEA KEGG rno:04512 NCBI chr 2:47,127,403...47,281,387
Ensembl chr 2:47,127,219...47,281,421
JBrowse link
G Itga10 integrin subunit alpha 10 IEA KEGG rno:04512 NCBI chr 2:198,772,937...198,792,253
Ensembl chr 2:198,772,937...198,792,253
JBrowse link
G Itga11 integrin subunit alpha 11 IEA KEGG rno:04512 NCBI chr 8:67,566,874...67,683,973
Ensembl chr 8:67,615,635...67,683,973
JBrowse link
G Itga2 integrin subunit alpha 2 IEA KEGG rno:04512 NCBI chr 2:46,996,904...47,097,011
Ensembl chr 2:47,000,323...47,096,961
JBrowse link
G Itga2b integrin subunit alpha 2b IEA KEGG rno:04512 NCBI chr10:90,397,960...90,416,550
Ensembl chr10:90,398,132...90,415,070
JBrowse link
G Itga4 integrin subunit alpha 4 IEA KEGG rno:04512 NCBI chr 3:66,178,745...66,265,547
Ensembl chr 3:66,193,059...66,263,960
JBrowse link
G Itga5 integrin subunit alpha 5 IEA KEGG rno:04512 NCBI chr 7:144,970,444...144,993,652
Ensembl chr 7:144,970,444...144,993,652
JBrowse link
G Itga6 integrin subunit alpha 6 IEA KEGG rno:04512 NCBI chr 3:58,442,904...58,515,124
Ensembl chr 3:58,443,101...58,515,124
JBrowse link
G Itga7 integrin subunit alpha 7 IEA KEGG rno:04512 NCBI chr 7:3,355,079...3,383,886
Ensembl chr 7:3,355,116...3,384,675
JBrowse link
G Itga9 integrin subunit alpha 9 IEA KEGG rno:04512 NCBI chr 8:127,271,029...127,576,709
Ensembl chr 8:127,271,289...127,572,988
JBrowse link
G Itgb1 integrin subunit beta 1 IEA KEGG rno:04512 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Itgb3 integrin subunit beta 3 IEA KEGG rno:04512 NCBI chr10:92,667,869...92,783,413
Ensembl chr10:92,667,869...92,783,410
JBrowse link
G Itgb4 integrin subunit beta 4 IEA KEGG rno:04512 NCBI chr10:104,524,000...104,560,180
Ensembl chr10:104,523,996...104,561,078
JBrowse link
G Itgb5 integrin subunit beta 5 IEA KEGG rno:04512 NCBI chr11:70,056,500...70,172,164
Ensembl chr11:70,056,500...70,172,372
JBrowse link
G Itgb6 integrin subunit beta 6 IEA KEGG rno:04512 NCBI chr 3:46,652,624...46,775,362
Ensembl chr 3:46,652,623...46,726,958
JBrowse link
G Itgb7 integrin subunit beta 7 IEA KEGG rno:04512 NCBI chr 7:143,820,236...143,837,802
Ensembl chr 7:143,820,900...143,837,780
JBrowse link
G Itgb8 integrin subunit beta 8 IEA KEGG rno:04512 NCBI chr 6:147,089,280...147,172,846
Ensembl chr 6:147,094,097...147,172,813
JBrowse link
G Lama1 laminin subunit alpha 1 IEA KEGG rno:04512 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123
JBrowse link
G Lama2 laminin subunit alpha 2 IEA KEGG rno:04512 NCBI chr 1:18,491,264...19,143,486
Ensembl chr 1:18,491,384...19,143,269
JBrowse link
G Lama5 laminin subunit alpha 5 IEA KEGG rno:04512 NCBI chr 3:175,553,042...175,601,112
Ensembl chr 3:175,553,045...175,601,127
JBrowse link
G Lamb2 laminin subunit beta 2 IEA KEGG rno:04512 NCBI chr 8:117,268,335...117,280,517
Ensembl chr 8:117,268,337...117,280,517
JBrowse link
G Lamb3 laminin subunit beta 3 IEA KEGG rno:04512 NCBI chr13:112,031,614...112,073,187
Ensembl chr13:112,031,594...112,073,186
JBrowse link
G Lamc1 laminin subunit gamma 1 IEA KEGG rno:04512 NCBI chr13:70,656,727...70,783,515
Ensembl chr13:70,658,707...70,783,515
JBrowse link
G Lamc2 laminin subunit gamma 2 IEA KEGG rno:04512 NCBI chr13:70,566,643...70,632,126
Ensembl chr13:70,566,643...70,626,252
JBrowse link
G Lamc3 laminin subunit gamma 3 IEA KEGG rno:04512 NCBI chr 3:9,265,407...9,327,107
Ensembl chr 3:9,267,122...9,326,993
JBrowse link
G Reln reelin IEA KEGG rno:04512 NCBI chr 4:9,347,533...9,774,257
Ensembl chr 4:9,347,528...9,773,670
JBrowse link
G RGD1565355 similar to fatty acid translocase/CD36 IEA KEGG rno:04512 NCBI chr 4:14,071,705...14,112,330
Ensembl chr 4:14,001,761...14,249,749
JBrowse link
G Sdc1 syndecan 1 IEA KEGG rno:04512 NCBI chr 6:33,885,576...33,908,038
Ensembl chr 6:33,885,495...33,908,016
JBrowse link
G Sdc2 syndecan 2 IEA KEGG rno:04512 NCBI chr 7:71,572,731...71,686,139
Ensembl chr 7:71,572,941...71,686,044
JBrowse link
G Sdc3 syndecan 3 IEA KEGG rno:04512 NCBI chr 5:148,923,098...148,956,404
Ensembl chr 5:148,923,098...148,956,404
JBrowse link
G Sdc4 syndecan 4 IEA KEGG rno:04512 NCBI chr 3:160,872,503...160,891,190
Ensembl chr 3:160,872,503...160,891,190
JBrowse link
G Spp1 secreted phosphoprotein 1 IEA KEGG rno:04512 NCBI chr14:6,673,686...6,679,965
Ensembl chr14:6,673,686...6,679,901
JBrowse link
G Sv2a synaptic vesicle glycoprotein 2a IEA KEGG rno:04512 NCBI chr 2:198,321,100...198,336,889
Ensembl chr 2:198,321,142...198,336,913
JBrowse link
G Sv2b synaptic vesicle glycoprotein 2b IEA KEGG rno:04512 NCBI chr 1:136,664,199...136,842,247
Ensembl chr 1:136,664,204...136,842,247
JBrowse link
G Sv2c synaptic vesicle glycoprotein 2c IEA KEGG rno:04512 NCBI chr 2:26,495,757...26,707,691
Ensembl chr 2:26,501,833...26,699,333
JBrowse link
G Thbs1 thrombospondin 1 IEA KEGG rno:04512 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466
JBrowse link
G Thbs2 thrombospondin 2 IEA KEGG rno:04512 NCBI chr 1:56,653,929...56,683,571
Ensembl chr 1:56,653,938...56,683,731
JBrowse link
G Thbs4 thrombospondin 4 IEA KEGG rno:04512 NCBI chr 2:22,343,727...22,385,855
Ensembl chr 2:22,343,727...22,385,855
JBrowse link
G Tnc tenascin C IEA KEGG rno:04512 NCBI chr 5:79,789,686...79,874,555
Ensembl chr 5:79,789,671...79,874,671
JBrowse link
G Tnn tenascin N IEA KEGG rno:04512 NCBI chr13:77,829,384...77,896,831
Ensembl chr13:77,829,382...77,896,697
JBrowse link
G Tnr tenascin R IEA KEGG rno:04512 NCBI chr13:77,602,249...77,678,385
Ensembl chr13:77,485,113...77,678,437
JBrowse link
G Vtn vitronectin IEA KEGG rno:04512 NCBI chr10:65,767,960...65,771,040
Ensembl chr10:65,767,053...65,771,038
JBrowse link
G Vwf von Willebrand factor IEA KEGG rno:04512 NCBI chr 4:158,085,059...158,219,525
Ensembl chr 4:158,088,505...158,219,523
JBrowse link
connexin signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gja1 gap junction protein, alpha 1 ISO RGD PMID:15381756 RGD:1580398 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Gja4 gap junction protein, alpha 4 ISO RGD PMID:15381756 RGD:1580398 NCBI chr 5:145,374,688...145,377,221
Ensembl chr 5:145,374,690...145,377,221
JBrowse link
G Gja5 gap junction protein, alpha 5 ISO RGD PMID:15381756 RGD:1580398 NCBI chr 2:199,162,745...199,184,942
Ensembl chr 2:199,162,745...199,184,939
JBrowse link
G Gjc1 gap junction protein, gamma 1 ISO RGD PMID:15381756 RGD:1580398 NCBI chr10:90,781,408...90,912,440
Ensembl chr10:90,781,402...90,912,287
JBrowse link
E-cadherin signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abi1 abl-interactor 1 ISO PID PID:200124, PID:200182 NCBI chr17:89,951,662...90,033,334
Ensembl chr17:89,951,752...90,033,328
JBrowse link
G Actn1 actinin, alpha 1 ISO PID PID:200182 NCBI chr 6:103,376,557...103,470,497
Ensembl chr 6:103,375,799...103,470,555
JBrowse link
G Ajuba ajuba LIM protein ISO PID PID:200147 NCBI chr15:33,208,210...33,218,456
Ensembl chr15:33,208,216...33,218,456
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO PID PID:200124, PID:200147 NCBI chr 6:137,218,398...137,239,970
Ensembl chr 6:137,218,376...137,236,258
JBrowse link
G Akt2 AKT serine/threonine kinase 2 ISO PID PID:200147 NCBI chr 1:84,400,939...84,451,223
Ensembl chr 1:84,411,726...84,450,162
JBrowse link
G Ap1m1 adaptor related protein complex 1 subunit mu 1 ISO PID PID:200124 NCBI chr16:19,288,354...19,303,818
Ensembl chr16:19,288,355...19,303,824
JBrowse link
G Aqp3 aquaporin 3 (Gill blood group) ISO PID PID:200182 NCBI chr 5:57,423,735...57,429,252
Ensembl chr 5:57,423,734...57,429,245
JBrowse link
G Aqp5 aquaporin 5 ISO PID PID:200182 NCBI chr 7:141,249,044...141,252,576
Ensembl chr 7:141,249,044...141,252,578
JBrowse link
G Arf6 ADP-ribosylation factor 6 ISO PID PID:200124, PID:200182 NCBI chr 6:91,697,109...91,698,257
Ensembl chr 6:91,697,109...91,698,255
JBrowse link
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 ISO PID PID:200182 NCBI chr12:2,133,935...2,157,403
Ensembl chr12:2,134,022...2,157,403
JBrowse link
G Casr calcium-sensing receptor ISO PID PID:200147 NCBI chr11:67,188,204...67,262,261
Ensembl chr11:67,188,630...67,258,771
JBrowse link
G Ccnd1 cyclin D1 ISO PID PID:200124 NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325
JBrowse link
G Cdc42 cell division cycle 42 ISO PID PID:200124 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
JBrowse link
G Cdh1 cadherin 1 ISO PID PID:200124, PID:200147, PID:200182 NCBI chr19:38,768,467...38,838,395
Ensembl chr19:38,768,467...38,838,395
JBrowse link
G Crk CRK proto-oncogene, adaptor protein ISO PID PID:200124 NCBI chr10:63,829,731...63,855,999
Ensembl chr10:63,829,807...63,852,780
JBrowse link
G Csnk2a1 casein kinase 2 alpha 1 ISO PID PID:200124 NCBI chr 3:147,713,808...147,760,375
Ensembl chr 3:147,713,821...147,757,862
JBrowse link
G Csnk2a2 casein kinase 2 alpha 2 ISO PID PID:200124 NCBI chr19:9,972,537...10,012,043
Ensembl chr19:9,972,537...10,012,043
JBrowse link
G Csnk2b casein kinase 2 beta ISO PID PID:200124 NCBI chr20:5,108,692...5,113,675
Ensembl chr20:5,106,890...5,113,112
JBrowse link
G Ctnna1 catenin alpha 1 ISO PID PID:200124, PID:200147, PID:200182 NCBI chr18:27,923,229...28,055,972
Ensembl chr18:27,923,572...28,055,960
JBrowse link
G Ctnnb1 catenin beta 1 ISO PID PID:200124, PID:200147, PID:200182 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ctnnd1 catenin delta 1 ISO PID PID:200124, PID:200147, PID:200182 NCBI chr 3:72,001,904...72,053,047
Ensembl chr 3:72,002,152...72,053,049
JBrowse link
G Cttn cortactin ISO PID PID:200124 NCBI chr 1:217,602,698...217,638,196
NCBI chr 1:215,255,385...215,290,882
Ensembl chr 1:217,602,698...217,638,152
Ensembl chr 1:217,602,698...217,638,152
JBrowse link
G Cyfip2 cytoplasmic FMR1 interacting protein 2 ISO PID PID:200124, PID:200182 NCBI chr10:31,278,746...31,419,235
Ensembl chr10:31,278,746...31,419,235
JBrowse link
G Diaph1 diaphanous-related formin 1 ISO PID PID:200182 NCBI chr18:30,972,907...31,071,371
Ensembl chr18:30,972,907...31,071,371
JBrowse link
G Dlg1 discs large MAGUK scaffold protein 1 ISO PID PID:200124 NCBI chr11:72,164,566...72,378,895
Ensembl chr11:72,163,749...72,378,895
JBrowse link
G Efna1 ephrin A1 ISO PID PID:200182 NCBI chr 2:188,588,808...188,596,156
Ensembl chr 2:188,588,796...188,596,222
JBrowse link
G Egf epidermal growth factor ISO PID PID:200182 NCBI chr 2:68,820,616...68,895,537 JBrowse link
G Egfr epidermal growth factor receptor ISO PID PID:200147, PID:200182 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Enah ENAH, actin regulator ISO PID PID:200124, PID:200182 NCBI chr13:100,297,421...100,415,335
Ensembl chr13:100,300,054...100,414,226
JBrowse link
G Epha2 Eph receptor A2 ISO PID PID:200182 NCBI chr 5:159,845,773...159,874,203
Ensembl chr 5:159,845,774...159,874,206
JBrowse link
G Exoc3 exocyst complex component 3 ISO PID PID:200182 NCBI chr 1:31,700,953...31,731,726
Ensembl chr 1:31,700,953...31,731,815
JBrowse link
G Exoc4 exocyst complex component 4 ISO PID PID:200182 NCBI chr 4:60,549,128...61,358,305
Ensembl chr 4:60,549,197...61,355,994
JBrowse link
G Fmn1 formin 1 ISO PID PID:200147 NCBI chr 3:104,783,093...105,170,761
Ensembl chr 3:104,816,987...105,086,436
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase ISO PID PID:200147 NCBI chr20:44,436,354...44,630,316
Ensembl chr20:44,436,403...44,630,317
JBrowse link
G Git1 GIT ArfGAP 1 ISO PID PID:200182 NCBI chr10:62,656,000...62,664,467
Ensembl chr10:62,656,000...62,664,466
JBrowse link
G Hgf hepatocyte growth factor ISO PID PID:200182 NCBI chr 4:15,435,460...15,505,377
Ensembl chr 4:15,433,295...15,505,362
JBrowse link
G Igf1 insulin-like growth factor 1 ISO PID PID:200182 NCBI chr 7:28,412,123...28,491,815
Ensembl chr 7:28,412,198...28,486,609
JBrowse link
G Igf1r insulin-like growth factor 1 receptor ISO PID PID:200182 NCBI chr 1:128,924,921...129,213,816
Ensembl chr 1:128,924,966...129,206,516
JBrowse link
G Iqgap1 IQ motif containing GTPase activating protein 1 ISO PID PID:200124 NCBI chr 1:142,525,041...142,615,673
Ensembl chr 1:142,525,046...142,615,673
JBrowse link
G Itgae integrin subunit alpha E ISO PID PID:200124 NCBI chr10:59,652,324...59,711,885
Ensembl chr10:59,539,405...59,711,874
JBrowse link
G Itgb7 integrin subunit beta 7 ISO PID PID:200124 NCBI chr 7:143,820,236...143,837,802
Ensembl chr 7:143,820,900...143,837,780
JBrowse link
G Jup junction plakoglobin ISO PID PID:200124, PID:200147 NCBI chr10:88,280,517...88,307,451
Ensembl chr10:88,279,632...88,307,412
JBrowse link
G Kifc3 kinesin family member C3 ISO PID PID:200182 NCBI chr19:10,305,405...10,339,186
Ensembl chr19:10,320,604...10,339,178
JBrowse link
G Klhl20 kelch-like family member 20 ISO PID PID:200124 NCBI chr13:78,912,361...78,957,226
Ensembl chr13:78,912,361...78,957,212
JBrowse link
G Lima1 LIM domain and actin binding 1 ISO PID PID:200182 NCBI chr 7:141,428,113...141,528,447
Ensembl chr 7:141,428,063...141,528,397
JBrowse link
G Lpp LIM domain containing preferred translocation partner in lipoma ISO PID PID:200182 NCBI chr11:79,192,603...79,827,858
Ensembl chr11:79,205,730...79,703,736
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO PID PID:200182 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase ISO PID PID:200182 NCBI chr 7:121,394,541...121,436,935
Ensembl chr 7:121,408,829...121,435,022
JBrowse link
G Myl2 myosin light chain 2 ISO PID PID:200182 NCBI chr12:39,951,863...39,959,065
Ensembl chr12:39,951,987...39,958,239
JBrowse link
G Myo6 myosin VI ISO PID PID:200182 NCBI chr 8:87,583,649...87,731,271
Ensembl chr 8:87,630,916...87,731,269
JBrowse link
G Nck1 NCK adaptor protein 1 ISO PID PID:200182 NCBI chr 8:108,787,797...108,847,779
Ensembl chr 8:108,787,798...108,847,779
JBrowse link
G Nckap1 NCK-associated protein 1 ISO PID PID:200124, PID:200182 NCBI chr 3:67,725,180...67,804,680
Ensembl chr 3:67,725,947...67,787,990
JBrowse link
G Nectin2 nectin cell adhesion molecule 2 ISO PID PID:200182 NCBI chr 1:80,631,449...80,666,617
Ensembl chr 1:80,631,450...80,666,585
JBrowse link
G Nme1 NME/NM23 nucleoside diphosphate kinase 1 ISO PID PID:200124 NCBI chr10:81,657,152...81,666,542
Ensembl chr10:81,657,153...81,666,523
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha ISO PID PID:200124, PID:200147 NCBI chr 2:118,831,350...118,861,456
Ensembl chr 2:118,831,350...118,861,454
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO PID PID:200124, PID:200147 NCBI chr 2:31,742,326...31,826,882
Ensembl chr 2:31,745,088...31,826,867
JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase, type 1, alpha ISO PID PID:200147 NCBI chr 2:196,227,669...196,270,949
Ensembl chr 2:196,227,670...196,270,826
JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma ISO PID PID:200124, PID:200182 NCBI chr 7:11,267,207...11,294,291
Ensembl chr 7:11,267,218...11,294,249
JBrowse link
G Plcg1 phospholipase C, gamma 1 ISO PID PID:200147 NCBI chr 3:156,727,642...156,758,307
Ensembl chr 3:156,727,642...156,758,307
JBrowse link
G Plekha7 pleckstrin homology domain containing A7 ISO PID PID:200182 NCBI chr 1:185,427,600...185,493,985
Ensembl chr 1:185,356,975...185,538,694
JBrowse link
G Rac1 Rac family small GTPase 1 ISO PID PID:200124, PID:200147 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family ISO PID PID:200124 NCBI chr 2:208,193,950...208,215,186
Ensembl chr 2:208,193,954...208,215,187
JBrowse link
G Rap1b RAP1B, member of RAS oncogene family ISO PID PID:200124 NCBI chr 7:60,850,406...60,878,226
Ensembl chr 7:60,853,930...60,860,990
JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 ISO PID PID:200124 NCBI chr 3:8,189,594...8,307,077
Ensembl chr 3:8,192,575...8,304,976
JBrowse link
G Rhoa ras homolog family member A ISO PID PID:200124, PID:200147, PID:200182 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 ISO PID PID:200182 NCBI chr18:1,273,490...1,390,790
Ensembl chr18:1,273,453...1,390,190
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO PID PID:200124, PID:200147 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Stx4 syntaxin 4 ISO PID PID:200182 NCBI chr 1:199,287,384...199,295,606
Ensembl chr 1:199,287,710...199,294,979
JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 ISO PID PID:200124 NCBI chr11:29,931,083...30,061,173
Ensembl chr11:29,933,163...30,051,103
JBrowse link
G Tjp1 tight junction protein 1 ISO PID PID:200124 NCBI chr 1:126,146,489...126,515,359
Ensembl chr 1:126,146,489...126,227,469
JBrowse link
G Vasp vasodilator-stimulated phosphoprotein ISO PID PID:200147, PID:200182 NCBI chr 1:80,170,608...80,185,882
Ensembl chr 1:80,170,619...80,185,882
JBrowse link
G Vav2 vav guanine nucleotide exchange factor 2 ISO PID PID:200124 NCBI chr 3:5,811,504...5,976,311
Ensembl chr 3:5,811,504...5,976,244
JBrowse link
G Vcl vinculin ISO PID PID:200182 NCBI chr15:3,455,211...3,544,738
Ensembl chr15:3,455,211...3,544,702
JBrowse link
G Wasf2 WASP family member 2 ISO PID PID:200124 NCBI chr 5:151,319,382...151,385,051
Ensembl chr 5:151,343,493...151,381,238
JBrowse link
G Zyx zyxin ISO PID PID:200147, PID:200182 NCBI chr 4:71,740,188...71,749,386
Ensembl chr 4:71,740,532...71,749,386
JBrowse link
ephrin - ephrin receptor bidirectional signaling axis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acp1 acid phosphatase 1 ISO PID PID:200216 NCBI chr 6:49,836,064...49,851,714
Ensembl chr 6:49,836,075...49,851,714
JBrowse link
G Arhgap35 Rho GTPase activating protein 35 ISO PID PID:200216 NCBI chr 1:78,456,409...78,573,374
Ensembl chr 1:78,456,409...78,573,374
JBrowse link
G Arhgef15 Rho guanine nucleotide exchange factor 15 ISO PID PID:200142 NCBI chr10:55,532,097...55,545,675
Ensembl chr10:55,532,077...55,544,429
JBrowse link
G Bcar1 BCAR1 scaffold protein, Cas family member ISO PID PID:200216 NCBI chr19:43,932,543...43,967,452
Ensembl chr19:43,932,554...43,955,783
JBrowse link
G Blk BLK proto-oncogene, Src family tyrosine kinase ISO PID PID:200142, PID:200204 NCBI chr15:46,555,552...46,593,778
Ensembl chr15:46,555,188...46,593,653
JBrowse link
G Cbl Cbl proto-oncogene ISO PID PID:200142, PID:200216 NCBI chr 8:48,481,256...48,564,775
Ensembl chr 8:48,489,036...48,564,722
JBrowse link
G Cdc42 cell division cycle 42 ISO PID PID:200052 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
JBrowse link
G Cdk5 cyclin-dependent kinase 5 ISO PID PID:200142 NCBI chr 4:7,282,945...7,287,427
Ensembl chr 4:7,282,948...7,288,383
JBrowse link
G Crk CRK proto-oncogene, adaptor protein ISO PID PID:200142 NCBI chr10:63,829,731...63,855,999
Ensembl chr10:63,829,807...63,852,780
JBrowse link
G Crkl CRK like proto-oncogene, adaptor protein ISO PID PID:200142 NCBI chr11:87,338,606...87,356,644
Ensembl chr11:87,778,312...87,815,043
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 ISO PID PID:200204 NCBI chr13:45,314,952...45,318,856
Ensembl chr13:45,314,933...45,318,878
JBrowse link
G Dnm1 dynamin 1 ISO PID PID:200052, PID:200204 NCBI chr 3:11,338,081...11,382,043
Ensembl chr 3:11,338,083...11,382,043
JBrowse link
G Efna1 ephrin A1 ISS
ISO
PID PMID:12615978 PID:200142, PID:200216, RGD:1299268 NCBI chr 2:188,588,808...188,596,156
Ensembl chr 2:188,588,796...188,596,222
JBrowse link
G Efna2 ephrin A2 TAS
ISO
PID PMID:10792438 PID:200142, RGD:1300471 NCBI chr 7:12,382,636...12,393,266
Ensembl chr 7:12,382,636...12,393,266
JBrowse link
G Efna3 ephrin A3 TAS
ISO
PID PMID:10954848 PID:200142, RGD:634739 NCBI chr 2:188,636,304...188,645,302
Ensembl chr 2:188,637,852...188,645,196
JBrowse link
G Efna5 ephrin A5 ISO PID PID:200052, PID:200059, PID:200142 NCBI chr 9:110,054,002...110,329,878
Ensembl chr 9:110,057,155...110,225,486
JBrowse link
G Efnb1 ephrin B1 TAS
ISO
PID PMID:12139920 PID:200052, PID:200204, RGD:727396 NCBI chr  X:68,891,227...68,904,034
Ensembl chr  X:68,891,227...68,904,038
JBrowse link
G Efnb2 ephrin B2 ISO PID PID:200052, PID:200204 NCBI chr16:86,631,151...86,672,050
Ensembl chr16:86,631,064...86,675,049
JBrowse link
G Efnb3 ephrin B3 TAS
ISO
PID PMID:12963092 PID:200052, RGD:1300456 NCBI chr10:56,161,431...56,168,819
Ensembl chr10:56,161,432...56,167,426
JBrowse link
G Epha1 Eph receptor A1 ISO PID PID:200142 NCBI chr 4:71,749,100...71,763,681
Ensembl chr 4:71,749,242...71,763,679
JBrowse link
G Epha2 Eph receptor A2 ISO PID PID:200142, PID:200216 NCBI chr 5:159,845,773...159,874,203
Ensembl chr 5:159,845,774...159,874,206
JBrowse link
G Epha3 Eph receptor A3 ISS
ISO
PID PMID:9458884 PID:200142, RGD:68243 NCBI chr11:421,253...783,037
Ensembl chr11:421,135...782,954
JBrowse link
G Epha4 Eph receptor A4 ISO PID PID:200142 NCBI chr 9:83,111,222...83,253,486
Ensembl chr 9:83,111,222...83,253,458
JBrowse link
G Epha5 EPH receptor A5 ISO PID PID:200059, PID:200142 NCBI chr14:25,589,312...25,958,258
Ensembl chr14:25,589,762...25,958,227
JBrowse link
G Epha6 Eph receptor A6 ISO PID PID:200142 NCBI chr11:41,867,607...42,843,800 JBrowse link
G Epha7 Eph receptor A7 ISS
ISO
PID PMID:7731712 PID:200142, RGD:70732 NCBI chr 5:43,602,744...43,761,198
Ensembl chr 5:43,603,043...43,757,549
JBrowse link
G Epha8 Eph receptor A8 ISO PID PID:200142 NCBI chr 5:155,293,731...155,321,016
Ensembl chr 5:155,295,314...155,316,495
JBrowse link
G Ephb1 Eph receptor B1 ISO PID PID:200052, PID:200204 NCBI chr 8:110,376,954...110,813,193
Ensembl chr 8:110,376,954...110,813,000
JBrowse link
G Ephb2 Eph receptor B2 ISO PID PID:200052, PID:200204 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Ephb3 Eph receptor B3 ISO PID PID:200052 NCBI chr11:83,527,960...83,546,742
Ensembl chr11:83,527,962...83,546,674
JBrowse link
G Ephb4 EPH receptor B4 ISO PID PID:200052, PID:200204 NCBI chr12:22,393,338...22,418,332
Ensembl chr12:22,393,330...22,417,980
JBrowse link
G Fga fibrinogen alpha chain ISO PID PID:200204 NCBI chr 2:181,997,562...182,013,726
Ensembl chr 2:182,006,242...182,013,763
JBrowse link
G Fgb fibrinogen beta chain ISO PID PID:200204 NCBI chr 2:182,028,044...182,035,026
Ensembl chr 2:182,027,115...182,038,178
JBrowse link
G Fgg fibrinogen gamma chain ISO PID PID:200204 NCBI chr 2:181,987,080...181,994,523
Ensembl chr 2:181,987,217...181,994,514
JBrowse link
G Fgr FGR proto-oncogene, Src family tyrosine kinase ISO PID PID:200142, PID:200204 NCBI chr 5:151,172,189...151,199,746
Ensembl chr 5:151,172,206...151,199,745
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase ISO PID PID:200059, PID:200142, PID:200204 NCBI chr20:44,436,354...44,630,316
Ensembl chr20:44,436,403...44,630,317
JBrowse link
G Grb2 growth factor receptor bound protein 2 ISO PID PID:200052, PID:200216 NCBI chr10:104,193,953...104,263,071
Ensembl chr10:104,193,955...104,263,071
JBrowse link
G Grb7 growth factor receptor bound protein 7 ISO PID PID:200052 NCBI chr10:86,393,186...86,408,893
Ensembl chr10:86,399,827...86,409,348
JBrowse link
G Gria1 glutamate ionotropic receptor AMPA type subunit 1 ISO PID PID:200052 NCBI chr10:42,441,723...42,760,200
Ensembl chr10:42,614,713...42,760,200
JBrowse link
G Hck HCK proto-oncogene, Src family tyrosine kinase ISO PID PID:200142, PID:200204 NCBI chr 3:148,579,917...148,623,026
Ensembl chr 3:148,579,920...148,623,033
JBrowse link
G Hras HRas proto-oncogene, GTPase ISO PID PID:200052 NCBI chr 1:214,178,404...214,181,841
Ensembl chr 1:214,178,407...214,181,686
JBrowse link
G Inppl1 inositol polyphosphate phosphatase-like 1 ISO PID PID:200216 NCBI chr 1:166,898,177...166,912,524
Ensembl chr 1:166,899,894...166,912,524
JBrowse link
G Itga2b integrin subunit alpha 2b ISO PID PID:200204 NCBI chr10:90,397,960...90,416,550
Ensembl chr10:90,398,132...90,415,070
JBrowse link
G Itgb3 integrin subunit beta 3 ISO PID PID:200204 NCBI chr10:92,667,869...92,783,413
Ensembl chr10:92,667,869...92,783,410
JBrowse link
G Itsn1 intersectin 1 ISO PID PID:200052 NCBI chr11:31,943,119...32,069,249
Ensembl chr11:31,893,489...32,069,249
JBrowse link
G Kalrn kalirin, RhoGEF kinase ISO PID PID:200052 NCBI chr11:69,484,293...70,025,682
Ensembl chr11:69,484,293...70,025,633
JBrowse link
G Lck LCK proto-oncogene, Src family tyrosine kinase ISO PID PID:200142, PID:200204 NCBI chr 5:147,750,976...147,779,627
Ensembl chr 5:147,750,973...147,761,983
JBrowse link
G Lyn LYN proto-oncogene, Src family tyrosine kinase ISO PID PID:200142, PID:200204 NCBI chr 5:16,526,058...16,642,648
Ensembl chr 5:16,526,058...16,642,648
JBrowse link
G Map2k1 mitogen activated protein kinase kinase 1 ISO PID PID:200052 NCBI chr 8:69,134,218...69,722,573
Ensembl chr 8:69,134,223...69,164,758
JBrowse link
G Map2k4 mitogen activated protein kinase kinase 4 ISO PID PID:200204 NCBI chr10:52,196,121...52,301,887
Ensembl chr10:52,196,124...52,290,657
JBrowse link
G Map3k7 mitogen activated protein kinase kinase kinase 7 ISO PID PID:200204 NCBI chr 5:47,183,142...47,244,424
Ensembl chr 5:47,186,558...47,244,416
JBrowse link
G Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 ISO PID PID:200052 NCBI chr 9:46,657,444...46,782,545
Ensembl chr 9:46,657,575...46,782,545
JBrowse link
G Mapk1 mitogen activated protein kinase 1 ISO PID PID:200052 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk3 mitogen activated protein kinase 3 ISO PID PID:200052 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO PID PID:200204 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
G Nck1 NCK adaptor protein 1 ISO PID PID:200052 NCBI chr 8:108,787,797...108,847,779
Ensembl chr 8:108,787,798...108,847,779
JBrowse link
G Nck2 NCK adaptor protein 2 ISO PID PID:200204 NCBI chr 9:50,246,767...50,373,307
Ensembl chr 9:50,247,692...50,373,284
JBrowse link
G Ngef neuronal guanine nucleotide exchange factor ISO PID PID:200142 NCBI chr 9:94,569,286...94,601,852
Ensembl chr 9:94,569,286...94,601,852
JBrowse link
G Nras NRAS proto-oncogene, GTPase ISO PID PID:200052 NCBI chr 2:205,553,119...205,563,716
Ensembl chr 2:205,553,163...205,560,791
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO PID PID:200052, PID:200216 NCBI chr 1:162,768,156...162,883,356
Ensembl chr 1:162,768,156...162,883,355
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha ISO PID PID:200052, PID:200204, PID:200216 NCBI chr 2:118,831,350...118,861,456
Ensembl chr 2:118,831,350...118,861,454
JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma ISO PID PID:200142 NCBI chr 6:51,465,696...51,501,234
Ensembl chr 6:51,465,908...51,498,337
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO PID PID:200052, PID:200204, PID:200216 NCBI chr 2:31,742,326...31,826,882
Ensembl chr 2:31,745,088...31,826,867
JBrowse link
G Pik3r5 phosphoinositide-3-kinase, regulatory subunit 5 ISO PID PID:200142 NCBI chr10:55,013,686...55,078,986
Ensembl chr10:55,013,703...55,080,421
JBrowse link
G Pik3r6 phosphoinositide-3-kinase, regulatory subunit 6 ISO PID PID:200142 NCBI chr10:55,085,269...55,135,069
Ensembl chr10:55,085,259...55,135,092
JBrowse link
G Plcg1 phospholipase C, gamma 1 ISO PID PID:200142 NCBI chr 3:156,727,642...156,758,307
Ensembl chr 3:156,727,642...156,758,307
JBrowse link
G Ptpn13 protein tyrosine phosphatase, non-receptor type 13 ISO PID PID:200204 NCBI chr14:7,688,551...7,863,664
Ensembl chr14:7,688,551...7,863,664
JBrowse link
G Pxn paxillin ISO PID PID:200052 NCBI chr12:46,797,953...46,845,107
Ensembl chr12:46,797,954...46,845,080
JBrowse link
G Rac1 Rac family small GTPase 1 ISO PID PID:200052, PID:200204, PID:200216 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family ISO PID PID:200052 NCBI chr 2:208,193,950...208,215,186
Ensembl chr 2:208,193,954...208,215,187
JBrowse link
G Rap1b RAP1B, member of RAS oncogene family ISO PID PID:200052 NCBI chr 7:60,850,406...60,878,226
Ensembl chr 7:60,853,930...60,860,990
JBrowse link
G Rasa1 RAS p21 protein activator 1 ISO PID PID:200052 NCBI chr 2:13,617,021...13,696,531
Ensembl chr 2:13,616,822...13,696,426
JBrowse link
G Rgs3 regulator of G-protein signaling 3 ISO PID PID:200204 NCBI chr 5:78,429,017...78,567,281
Ensembl chr 5:78,428,669...78,567,288
JBrowse link
G Rhoa ras homolog family member A ISO PID PID:200142, PID:200216 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 ISO PID PID:200052, PID:200142 NCBI chr18:1,273,490...1,390,790
Ensembl chr18:1,273,453...1,390,190
JBrowse link
G Rras RAS related ISO PID PID:200052 NCBI chr 1:101,012,822...101,016,720
Ensembl chr 1:101,012,822...101,016,720
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO PID PID:200052, PID:200142, PID:200204, PID:200216 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Synj1 synaptojanin 1 ISO PID PID:200052 NCBI chr11:31,105,784...31,181,573
Ensembl chr11:31,104,787...31,180,642
JBrowse link
G Tf transferrin ISO PID PID:200052 NCBI chr 8:111,694,570...111,721,275
Ensembl chr 8:111,673,547...111,721,333
JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 ISO PID PID:200204, PID:200216 NCBI chr11:29,931,083...30,061,173
Ensembl chr11:29,933,163...30,051,103
JBrowse link
G Vav2 vav guanine nucleotide exchange factor 2 ISO PID PID:200142, PID:200216 NCBI chr 3:5,811,504...5,976,311
Ensembl chr 3:5,811,504...5,976,244
JBrowse link
G Vav3 vav guanine nucleotide exchange factor 3 ISO PID PID:200142, PID:200216 NCBI chr 2:212,247,061...212,585,818
Ensembl chr 2:212,247,451...212,585,818
JBrowse link
G Wasl WASP like actin nucleation promoting factor ISO PID PID:200052 NCBI chr 4:51,677,722...51,726,212
Ensembl chr 4:51,677,722...51,726,212
JBrowse link
G Yes1 YES proto-oncogene 1, Src family tyrosine kinase ISO PID PID:200142, PID:200204 NCBI chr 9:121,802,471...121,918,906
Ensembl chr 9:121,802,673...121,902,678
JBrowse link
integrin mediated signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apbb1ip amyloid beta precursor protein binding family B member 1 interacting protein ISO RGD PMID:18363565 RGD:2300340 NCBI chr17:90,098,953...90,149,192
Ensembl chr17:90,099,025...90,149,894
JBrowse link
G Fabp3 fatty acid binding protein 3 ISO RGD PMID:23719537 RGD:7364738 NCBI chr 5:148,528,854...148,535,597
Ensembl chr 5:148,528,725...148,535,565
JBrowse link
G Fblim1 filamin binding LIM protein 1 ISO RGD PMID:23860236 RGD:7349373 NCBI chr 5:160,122,466...160,158,921
Ensembl chr 5:160,122,425...160,158,386
JBrowse link
G Fermt1 fermitin family member 1 ISO RGD PMID:23860236 RGD:7349373 NCBI chr 3:125,566,744...125,607,864
Ensembl chr 3:125,566,643...125,607,735
JBrowse link
G Fermt2 fermitin family member 2 ISO RGD PMID:23860236 RGD:7349373 NCBI chr15:19,807,806...19,876,557
Ensembl chr15:19,807,808...19,876,408
JBrowse link
G Fermt3 fermitin family member 3 ISO RGD PMID:23860236 RGD:7349373 NCBI chr 1:222,254,183...222,272,775
Ensembl chr 1:222,254,184...222,272,285
JBrowse link
G Flna filamin A ISO RGD PMID:23719537 RGD:7364738 NCBI chr  X:156,460,785...156,487,245
Ensembl chr  X:156,463,953...156,487,245
JBrowse link
G Flnb filamin B ISO RGD PMID:23719537 RGD:7364738 NCBI chr15:18,750,152...18,883,019
Ensembl chr15:18,750,118...18,883,005
JBrowse link
G Flnc filamin C ISO RGD PMID:23719537 RGD:7364738 NCBI chr 4:56,710,934...56,738,779
Ensembl chr 4:56,711,049...56,738,791
JBrowse link
G Ilk integrin-linked kinase ISS
IMP
ISO
RGD PMID:11304546, PMID:12629168, PMID:16493410 RGD:633110, RGD:2302091, RGD:2300344 NCBI chr 1:170,578,941...170,585,192
Ensembl chr 1:170,578,889...170,585,189
JBrowse link
G Ilkap ILK associated serine/threonine phosphatase ISO RGD PMID:16493410 RGD:2300344 NCBI chr 9:98,514,599...98,536,586
Ensembl chr 9:98,514,584...98,536,581
JBrowse link
G Itga1 integrin subunit alpha 1 ISS
ISO
RGD PMID:2380249, PMID:17543136 RGD:729264, RGD:5135538 NCBI chr 2:47,127,403...47,281,387
Ensembl chr 2:47,127,219...47,281,421
JBrowse link
G Itga10 integrin subunit alpha 10 ISO RGD PMID:12297042, PMID:17543136 RGD:1358329, RGD:5135538 NCBI chr 2:198,772,937...198,792,253
Ensembl chr 2:198,772,937...198,792,253
JBrowse link
G Itga11 integrin subunit alpha 11 ISO RGD PMID:12297042, PMID:17543136 RGD:1358329, RGD:5135538 NCBI chr 8:67,566,874...67,683,973
Ensembl chr 8:67,615,635...67,683,973
JBrowse link
G Itga2 integrin subunit alpha 2 TAS
ISO
RGD PMID:12941079, PMID:17543136 RGD:1302878, RGD:5135538 NCBI chr 2:46,996,904...47,097,011
Ensembl chr 2:47,000,323...47,096,961
JBrowse link
G Itga2b integrin subunit alpha 2b ISO based on Entrez HomoloGene, BLAST RGD PMID:17543136 RGD:5135538 NCBI chr10:90,397,960...90,416,550
Ensembl chr10:90,398,132...90,415,070
JBrowse link
G Itga3 integrin subunit alpha 3 ISO RGD PMID:12297042, PMID:17543136 RGD:1358329, RGD:5135538 NCBI chr10:82,855,841...82,887,755
Ensembl chr10:82,855,613...82,887,497
JBrowse link
G Itga4 integrin subunit alpha 4 TAS
ISO
RGD PMID:11782963, PMID:17543136 RGD:1302879, RGD:5135538 NCBI chr 3:66,178,745...66,265,547
Ensembl chr 3:66,193,059...66,263,960
JBrowse link
G Itga5 integrin subunit alpha 5 IDA
ISO
RGD PMID:12821041, PMID:17543136 RGD:1300196, RGD:5135538 NCBI chr 7:144,970,444...144,993,652
Ensembl chr 7:144,970,444...144,993,652
JBrowse link
G Itga6 integrin subunit alpha 6 ISS
ISO
RGD PMID:12297042, PMID:17543136 RGD:1358329, RGD:5135538 NCBI chr 3:58,442,904...58,515,124
Ensembl chr 3:58,443,101...58,515,124
JBrowse link
G Itga7 integrin subunit alpha 7 IDA
ISO
RGD PMID:1315319, PMID:17543136 RGD:70774, RGD:5135538 NCBI chr 7:3,355,079...3,383,886
Ensembl chr 7:3,355,116...3,384,675
JBrowse link
G Itga8 integrin subunit alpha 8 TAS
ISO
RGD PMID:10504498, PMID:17543136 RGD:633055, RGD:5135538 NCBI chr17:79,321,893...79,676,927
Ensembl chr17:79,321,900...79,676,499
JBrowse link
G Itga9 integrin subunit alpha 9 ISO RGD PMID:12297042, PMID:17543136 RGD:1358329, RGD:5135538 NCBI chr 8:127,271,029...127,576,709
Ensembl chr 8:127,271,289...127,572,988
JBrowse link
G Itgad integrin subunit alpha D ISS
ISO
RGD PMID:12297042, PMID:17543136 RGD:1358329, RGD:5135538 NCBI chr 1:199,595,968...199,623,931
Ensembl chr 1:199,495,298...199,623,960
JBrowse link
G Itgae integrin subunit alpha E TAS
ISO
RGD PMID:9394838, PMID:17543136 RGD:633077, RGD:5135538 NCBI chr10:59,652,324...59,711,885
Ensembl chr10:59,539,405...59,711,874
JBrowse link
G Itgal integrin subunit alpha L ISS
ISO
RGD PMID:12297042, PMID:17543136 RGD:1358329, RGD:5135538 NCBI chr 1:198,744,053...198,781,745
Ensembl chr 1:198,744,050...198,781,750
JBrowse link
G Itgam integrin subunit alpha M ISS
ISO
RGD PMID:12297042, PMID:17543136 RGD:1358329, RGD:5135538 NCBI chr 1:199,495,312...199,545,738
Ensembl chr 1:199,495,298...199,623,960
JBrowse link
G Itgav integrin subunit alpha V ISO
IDA
RGD PMID:12297042, PMID:17543136, PMID:12639933 RGD:1358329, RGD:5135538, RGD:1625134 NCBI chr 3:71,113,269...71,205,958
Ensembl chr 3:71,114,100...71,202,411
JBrowse link
G Itgax integrin subunit alpha X ISO RGD PMID:17543136 RGD:5135538 NCBI chr 1:199,555,560...199,576,948
Ensembl chr 1:199,555,722...199,576,932
JBrowse link
G Itgb1 integrin subunit beta 1 ISS
ISO
IDA
RGD PMID:9633916, PMID:17543136, PMID:12639933 RGD:1302874, RGD:5135538, RGD:1625134 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Itgb1bp1 integrin subunit beta 1 binding protein 1 ISO RGD PMID:23860236, PMID:23719537 RGD:7349373, RGD:7364738 NCBI chr 6:43,348,927...43,363,633
Ensembl chr 6:43,348,958...43,363,335
JBrowse link
G Itgb2 integrin subunit beta 2 ISO RGD PMID:12297042, PMID:17543136 RGD:1358329, RGD:5135538 NCBI chr20:11,777,773...11,815,647
Ensembl chr20:11,777,783...11,815,647
JBrowse link
G Itgb3 integrin subunit beta 3 ISS
ISO
IDA
RGD PMID:12600920, PMID:17543136, PMID:12639933 RGD:633129, RGD:5135538, RGD:1625134 NCBI chr10:92,667,869...92,783,413
Ensembl chr10:92,667,869...92,783,410
JBrowse link
G Itgb4 integrin subunit beta 4 TAS
ISO
RGD PMID:8026337, PMID:17543136 RGD:729025, RGD:5135538 NCBI chr10:104,524,000...104,560,180
Ensembl chr10:104,523,996...104,561,078
JBrowse link
G Itgb5 integrin subunit beta 5 ISS
ISO
RGD PMID:9531507, PMID:17543136 RGD:724441, RGD:5135538 NCBI chr11:70,056,500...70,172,164
Ensembl chr11:70,056,500...70,172,372
JBrowse link
G Itgb6 integrin subunit beta 6 ISS
ISO
RGD PMID:12297042, PMID:17543136 RGD:1358329, RGD:5135538 NCBI chr 3:46,652,624...46,775,362
Ensembl chr 3:46,652,623...46,726,958
JBrowse link
G Itgb7 integrin subunit beta 7 TAS
ISO
RGD PMID:9233649, PMID:17543136 RGD:633040, RGD:5135538 NCBI chr 7:143,820,236...143,837,802
Ensembl chr 7:143,820,900...143,837,780
JBrowse link
G Itgb8 integrin subunit beta 8 ISO RGD PMID:12297042, PMID:17543136 RGD:1358329, RGD:5135538 NCBI chr 6:147,089,280...147,172,846
Ensembl chr 6:147,094,097...147,172,813
JBrowse link
G Krit1 KRIT1, ankyrin repeat containing ISO RGD PMID:23860236, PMID:23719537 RGD:7349373, RGD:7364738 NCBI chr 4:27,438,609...27,473,150
Ensembl chr 4:27,438,609...27,473,150
JBrowse link
G Lims1 LIM zinc finger domain containing 1 ISO RGD PMID:16493410 RGD:2300344 NCBI chr20:27,895,981...28,004,767
Ensembl chr20:27,954,433...28,002,082
JBrowse link
G Lims2 LIM zinc finger domain containing 2 ISO RGD PMID:16493410 RGD:2300344 NCBI chr18:24,707,951...24,746,159
Ensembl chr18:24,708,115...24,746,159
JBrowse link
G Nck2 NCK adaptor protein 2 ISO RGD PMID:16493410 RGD:2300344 NCBI chr 9:50,246,767...50,373,307
Ensembl chr 9:50,247,692...50,373,284
JBrowse link
G Parva parvin, alpha ISO RGD PMID:16493410 RGD:2300344 NCBI chr 1:177,249,302...177,408,160
Ensembl chr 1:177,249,226...177,408,205
JBrowse link
G Parvb parvin, beta ISO RGD PMID:16493410 RGD:2300344 NCBI chr 7:125,189,827...125,275,977
Ensembl chr 7:125,189,827...125,277,689
JBrowse link
G Parvg parvin, gamma ISO RGD PMID:16493410 RGD:2300344 NCBI chr 7:125,288,081...125,307,587
Ensembl chr 7:125,288,081...125,306,976
JBrowse link
G Ptk2 protein tyrosine kinase 2 ISO RGD PMID:15108811 RGD:2300402 NCBI chr 7:114,436,419...114,611,317
Ensembl chr 7:114,437,361...114,590,119
JBrowse link
G Pxn paxillin ISO RGD PMID:16493410 RGD:2300344 NCBI chr12:46,797,953...46,845,107
Ensembl chr12:46,797,954...46,845,080
JBrowse link
G Sharpin SHANK-associated RH domain interactor ISO RGD PMID:23860236, PMID:23719537 RGD:7349373, RGD:7364738 NCBI chr 7:117,413,151...117,417,455
Ensembl chr 7:117,413,152...117,417,363
JBrowse link
G Tln1 talin 1 ISO RGD PMID:18363565, PMID:23860236 RGD:2300340, RGD:7349373 NCBI chr 5:59,033,635...59,063,592
Ensembl chr 5:59,033,636...59,063,592
JBrowse link
G Tln2 talin 2 ISO RGD PMID:23860236 RGD:7349373 NCBI chr 8:73,009,980...73,441,536
Ensembl chr 8:73,014,137...73,194,837
JBrowse link
N-cadherin signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Axin1 axin 1 ISO PID PID:200209
G Calm1 calmodulin 1 ISO PID PID:200209 NCBI chr 6:124,217,241...124,225,292
Ensembl chr 6:124,217,241...124,225,292
JBrowse link
G Calm2 calmodulin 2 ISO PID PID:200209 NCBI chr 6:11,067,675...11,080,078
Ensembl chr15:65,506,874...65,507,968
JBrowse link
G Calm3 calmodulin 3 ISO PID PID:200209 NCBI chr 1:78,844,520...78,851,628
Ensembl chr 1:78,843,080...78,851,719
JBrowse link
G Camk2g calcium/calmodulin-dependent protein kinase II gamma ISO PID PID:200209 NCBI chr15:3,936,721...3,995,740
Ensembl chr15:3,936,786...3,995,915
JBrowse link
G Cdc42 cell division cycle 42 ISO PID PID:200209 NCBI chr 5:155,690,267...155,728,385
Ensembl chr 5:155,691,390...155,728,300
JBrowse link
G Cdh2 cadherin 2 ISO PID PID:200209 NCBI chr18:8,146,971...8,366,037
Ensembl chr18:8,146,971...8,360,684
JBrowse link
G Cnr1 cannabinoid receptor 1 ISO PID PID:200209 NCBI chr 5:49,307,584...49,333,064
Ensembl chr 5:49,311,030...49,333,056
JBrowse link
G Ctnna1 catenin alpha 1 ISO PID PID:200209 NCBI chr18:27,923,229...28,055,972
Ensembl chr18:27,923,572...28,055,960
JBrowse link
G Ctnnb1 catenin beta 1 ISO PID PID:200209 NCBI chr 8:129,601,511...129,628,378
Ensembl chr 8:129,617,812...129,627,372
JBrowse link
G Ctnnd1 catenin delta 1 ISO PID PID:200209 NCBI chr 3:72,001,904...72,053,047
Ensembl chr 3:72,002,152...72,053,049
JBrowse link
G Cttn cortactin ISO PID PID:200209 NCBI chr 1:217,602,698...217,638,196
NCBI chr 1:215,255,385...215,290,882
Ensembl chr 1:217,602,698...217,638,152
Ensembl chr 1:217,602,698...217,638,152
JBrowse link
G Dagla diacylglycerol lipase, alpha ISO PID PID:200209 NCBI chr 1:226,297,013...226,353,712
Ensembl chr 1:226,297,016...226,353,611
JBrowse link
G Daglb diacylglycerol lipase, beta ISO PID PID:200209 NCBI chr12:13,113,073...13,157,748
Ensembl chr12:13,113,237...13,157,666
JBrowse link
G Dctn1 dynactin subunit 1 ISO PID PID:200209 NCBI chr 4:114,876,770...114,896,567
Ensembl chr 4:114,876,770...114,896,573
JBrowse link
G Fer FER tyrosine kinase ISO PID PID:200209 NCBI chr 9:111,557,804...111,868,583
Ensembl chr 9:111,597,037...111,862,670
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 ISO PID PID:200209 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Gap43 growth associated protein 43 ISO PID PID:200209 NCBI chr11:58,624,198...58,717,916
Ensembl chr11:58,624,198...58,717,914
JBrowse link
G Gja1 gap junction protein, alpha 1 ISO PID PID:200209 NCBI chr20:37,876,650...37,889,097
Ensembl chr20:37,876,650...37,889,089
JBrowse link
G Gria2 glutamate ionotropic receptor AMPA type subunit 2 ISO PID PID:200209 NCBI chr 2:179,584,302...179,704,629
Ensembl chr 2:179,584,308...179,704,629
JBrowse link
G Gsn gelsolin ISO PID PID:200209 NCBI chr 3:14,456,106...14,508,922
Ensembl chr 3:14,467,330...14,508,911
JBrowse link
G Jup junction plakoglobin ISO PID PID:200209 NCBI chr10:88,280,517...88,307,451
Ensembl chr10:88,279,632...88,307,412
JBrowse link
G Kif5b kinesin family member 5B ISO PID PID:200209 NCBI chr17:54,181,416...54,219,048
Ensembl chr17:54,181,419...54,212,096
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO PID PID:200209 NCBI chr 1:218,816,833...218,920,147
Ensembl chr 1:218,816,841...218,920,094
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO PID PID:200209 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
G Mapre1 microtubule-associated protein, RP/EB family, member 1 ISO PID PID:200209 NCBI chr 3:149,221,346...149,249,469
Ensembl chr 3:149,221,377...149,249,273
JBrowse link
G Myl2 myosin light chain 2 ISO PID PID:200209 NCBI chr12:39,951,863...39,959,065
Ensembl chr12:39,951,987...39,958,239
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit alpha ISO PID PID:200209 NCBI chr 2:118,831,350...118,861,456
Ensembl chr 2:118,831,350...118,861,454
JBrowse link
G Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ISO PID PID:200209 NCBI chr 2:31,742,326...31,826,882
Ensembl chr 2:31,745,088...31,826,867
JBrowse link
G Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma ISO PID PID:200209 NCBI chr 7:11,267,207...11,294,291
Ensembl chr 7:11,267,218...11,294,249
JBrowse link
G Plcg1 phospholipase C, gamma 1 ISO PID PID:200209 NCBI chr 3:156,727,642...156,758,307
Ensembl chr 3:156,727,642...156,758,307
JBrowse link
G Ptpn1 protein tyrosine phosphatase, non-receptor type 1 ISO PID PID:200209 NCBI chr 3:164,665,462...164,711,936
Ensembl chr 3:164,665,532...164,711,848
JBrowse link
G Ptpn11 protein tyrosine phosphatase, non-receptor type 11 ISO PID PID:200209 NCBI chr12:40,895,515...40,955,999
Ensembl chr12:40,895,515...40,955,999
JBrowse link
G Rac1 Rac family small GTPase 1 ISO PID PID:200209 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Rhoa ras homolog family member A ISO PID PID:200209 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Rock1 Rho-associated coiled-coil containing protein kinase 1 ISO PID PID:200209 NCBI chr18:1,273,490...1,390,790
Ensembl chr18:1,273,453...1,390,190
JBrowse link
Notch signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam10 ADAM metallopeptidase domain 10 ISS
ISO
PID PMID:12354787, PMID:17761886 PID:200015, RGD:1300252, RGD:2302204 NCBI chr 8:77,107,355...77,237,483
Ensembl chr 8:77,107,536...77,237,483
JBrowse link
G Adam12 ADAM metallopeptidase domain 12 ISO PID PID:200015 NCBI chr 1:205,951,840...206,286,294
Ensembl chr 1:205,956,342...206,282,575
JBrowse link
G Adam17 ADAM metallopeptidase domain 17 ISO
IEA
KEGG PMID:17761886 rno:04330, RGD:2302204 NCBI chr 6:43,400,525...43,448,280
Ensembl chr 6:43,400,528...43,448,280
JBrowse link
G Aph1a aph-1 homolog A, gamma secretase subunit ISO
IEA
KEGG
PID
PMID:17761886 PID:200015, rno:04330, RGD:2302204 NCBI chr 2:198,006,247...198,009,837
Ensembl chr 2:198,006,316...198,009,830
JBrowse link
G Aph1b aph-1 homolog B, gamma secretase subunit ISO
IEA
KEGG
PID
PMID:17761886 PID:200015, rno:04330, RGD:2302204 NCBI chr 8:72,508,008...72,598,921
Ensembl chr 8:72,476,425...72,629,265
JBrowse link
G Cbl Cbl proto-oncogene ISO PID PID:200015 NCBI chr 8:48,481,256...48,564,775
Ensembl chr 8:48,489,036...48,564,722
JBrowse link
G Ccnd1 cyclin D1 ISO PID PID:200015 NCBI chr 1:218,090,750...218,100,447
Ensembl chr 1:218,090,750...218,100,325
JBrowse link
G Cdkn1a cyclin-dependent kinase inhibitor 1A ISO PID PID:200015 NCBI chr20:6,348,422...6,358,864
Ensembl chr20:6,351,458...6,358,864
JBrowse link
G Cir1 corepressor interacting with RBPJ, CIR1 IEA KEGG rno:04330 NCBI chr 3:59,994,547...60,023,843
Ensembl chr 3:59,994,181...60,023,913
JBrowse link
G Cntn1 contactin 1 ISO PID PID:200015 NCBI chr 7:133,290,606...133,588,314
Ensembl chr 7:133,400,485...133,586,677
JBrowse link
G Cntn6 contactin 6 ISO PID PID:200015 NCBI chr 4:136,512,201...136,904,355
Ensembl chr 4:136,512,201...136,904,355
JBrowse link
G Crebbp CREB binding protein IEA KEGG rno:04330 NCBI chr10:11,590,994...11,721,039
Ensembl chr10:11,595,044...11,721,039
JBrowse link
G Ctbp1 C-terminal binding protein 1 ISO
IEA
PID
KEGG
PID:200015, rno:04330 NCBI chr14:82,762,109...82,789,350
Ensembl chr14:82,762,190...82,789,319
JBrowse link
G Ctbp2 C-terminal binding protein 2 IEA KEGG rno:04330 NCBI chr 1:205,001,354...205,030,565
Ensembl chr 1:205,001,396...205,040,755
JBrowse link
G Cul1 cullin 1 ISO PID PID:200015 NCBI chr 4:77,211,814...77,283,369
Ensembl chr 4:77,211,692...77,280,250
JBrowse link
G Dlk1 delta like non-canonical Notch ligand 1 ISO PID PID:200015 NCBI chr 6:133,576,513...133,583,751
Ensembl chr 6:133,552,821...133,583,751
JBrowse link
G Dll1 delta like canonical Notch ligand 1 TAS
IEA
ISO
KEGG
PID
PMID:14743446, PMID:17761886 PID:200015, rno:04330, RGD:1304491, RGD:2302204 NCBI chr 1:57,318,621...57,326,732
Ensembl chr 1:57,318,708...57,327,379
JBrowse link
G Dll3 delta like canonical Notch ligand 3 TAS
IEA
ISO
KEGG
PID
PMID:14743446, PMID:17761886 PID:200015, rno:04330, RGD:1304491, RGD:2302204 NCBI chr 1:85,485,875...85,493,683
Ensembl chr 1:85,485,289...85,493,685
JBrowse link
G Dll4 delta like canonical Notch ligand 4 ISO
IEA
KEGG
PID
PMID:17761886 PID:200015, rno:04330, RGD:2302204 NCBI chr 3:111,135,011...111,146,746
Ensembl chr 3:111,135,021...111,145,986
JBrowse link
G Dner delta/notch-like EGF repeat containing ISO PID PID:200015 NCBI chr 9:91,965,866...92,291,172
Ensembl chr 9:91,965,866...92,291,220
JBrowse link
G Dnm1 dynamin 1 ISO PID PID:200015 NCBI chr 3:11,338,081...11,382,043
Ensembl chr 3:11,338,083...11,382,043
JBrowse link
G Dtx1 deltex E3 ubiquitin ligase 1 ISO PID PID:200015 NCBI chr12:41,383,885...41,415,783
Ensembl chr12:41,385,241...41,414,754
JBrowse link
G Dtx2 deltex E3 ubiquitin ligase 2 IEA KEGG rno:04330 NCBI chr12:23,687,958...23,727,594
Ensembl chr12:23,687,966...23,727,564
JBrowse link
G Dtx3 deltex E3 ubiquitin ligase 3 IEA KEGG rno:04330 NCBI chr 7:70,476,737...70,482,852
Ensembl chr 7:70,476,729...70,481,796
JBrowse link
G Dtx3l deltex E3 ubiquitin ligase 3L IEA KEGG rno:04330 NCBI chr11:67,758,093...67,767,623
NCBI chr11:67,768,542...67,772,428
Ensembl chr11:67,757,928...67,767,622
JBrowse link
G Dtx4 deltex E3 ubiquitin ligase 4 IEA KEGG rno:04330 NCBI chr 1:228,729,842...228,759,783
Ensembl chr 1:228,732,985...228,755,866
JBrowse link
G Dvl1 dishevelled segment polarity protein 1 IEA KEGG rno:04330 NCBI chr 5:173,295,948...173,308,014
Ensembl chr 5:173,296,270...173,307,945
JBrowse link
G Dvl3 dishevelled segment polarity protein 3 IEA KEGG rno:04330 NCBI chr11:84,051,177...84,068,479
Ensembl chr11:84,051,078...84,068,302
JBrowse link
G Eno1 enolase 1 ISO PID PID:200015 NCBI chr 5:167,288,223...167,299,610
Ensembl chr 5:167,288,223...167,299,609
JBrowse link
G Ep300 E1A binding protein p300 ISO
IEA
PID
KEGG
PID:200015, rno:04330 NCBI chr 7:122,818,194...122,889,055
Ensembl chr 7:122,818,975...122,861,296
JBrowse link
G Eps15 epidermal growth factor receptor pathway substrate 15 ISO PID PID:200015 NCBI chr 5:128,923,809...129,022,268
Ensembl chr 5:128,923,934...129,022,054
JBrowse link
G Fbxw7 F-box and WD repeat domain containing 7 ISO PID PID:200015 NCBI chr 2:184,230,191...184,309,805
Ensembl chr 2:184,231,260...184,309,664
JBrowse link
G Furin furin (paired basic amino acid cleaving enzyme) ISO PID PID:200015 NCBI chr 1:142,185,092...142,198,167
Ensembl chr 1:142,185,094...142,197,182
JBrowse link
G Gata3 GATA binding protein 3 ISO PID PID:200015 NCBI chr17:72,419,752...72,452,043
Ensembl chr17:72,429,618...72,450,681
JBrowse link
G Hdac1 histone deacetylase 1 ISO
IEA
PID
KEGG
PID:200015, rno:04330 NCBI chr 5:147,716,664...147,743,723
Ensembl chr 5:147,716,664...147,743,723
JBrowse link
G Hdac1l histone deacetylase 1-like IEA KEGG rno:04330 NCBI chr 9:84,893,145...84,894,599
Ensembl chr 9:84,893,145...84,894,599
JBrowse link
G Hdac2 histone deacetylase 2 IEA KEGG rno:04330 NCBI chr20:43,084,870...43,108,198
Ensembl chr20:43,084,870...43,108,198
JBrowse link
G Hes1 hes family bHLH transcription factor 1 ISO
IEA
KEGG PMID:17586813 rno:04330, RGD:5135539 NCBI chr11:74,312,837...74,315,249
Ensembl chr11:74,312,806...74,315,248
JBrowse link
G Hes5 hes family bHLH transcription factor 5 ISO
IEA
KEGG PMID:17586813 rno:04330, RGD:5135539 NCBI chr 5:172,364,421...172,365,188
Ensembl chr 5:172,364,421...172,365,188
JBrowse link
G Hes7 hes family bHLH transcription factor 7 ISO RGD PMID:17586813 RGD:5135539 NCBI chr10:55,704,485...55,710,523
Ensembl chr10:55,707,164...55,709,687
JBrowse link
G Hey1 hes-related family bHLH transcription factor with YRPW motif 1 IDA
ISO
RGD PMID:11741889, PMID:17586813 RGD:70528, RGD:5135539 NCBI chr 2:95,320,147...95,322,701
Ensembl chr 2:95,320,283...95,322,696
JBrowse link
G Hey2 hes-related family bHLH transcription factor with YRPW motif 2 ISO
IDA
RGD PMID:17586813, PMID:11741889 RGD:5135539, RGD:70528 NCBI chr 1:29,191,170...29,201,257
Ensembl chr 1:29,191,192...29,201,531
JBrowse link
G Heyl hes-related family bHLH transcription factor with YRPW motif-like ISO RGD PMID:17586813 RGD:5135539 NCBI chr 5:140,923,914...140,940,905
Ensembl chr 5:140,923,914...140,940,905
JBrowse link
G Il4 interleukin 4 ISO PID PID:200015 NCBI chr10:38,963,979...38,969,531
Ensembl chr10:38,963,979...38,969,531
JBrowse link
G Itch itchy E3 ubiquitin protein ligase ISO PID PID:200015 NCBI chr 3:150,660,665...150,752,016
Ensembl chr 3:150,686,638...150,749,827
JBrowse link
G Jag1 jagged canonical Notch ligand 1 IDA
IEA
ISO
IMP
KEGG
PID
PMID:7697721, PMID:15057910, PMID:17761886 PID:200015, rno:04330, RGD:69863, RGD:1334443, RGD:2302204 NCBI chr 3:130,079,361...130,114,781
Ensembl chr 3:130,079,361...130,114,770
JBrowse link
G Jag2 jagged canonical Notch ligand 2 TAS
IEA
ISO
KEGG
PID
PMID:8948600, PMID:17761886 PID:200015, rno:04330, RGD:69864, RGD:2302204 NCBI chr 6:137,711,144...137,733,331
Ensembl chr 6:137,711,155...137,733,026
JBrowse link
G Kat2a lysine acetyltransferase 2A IEA KEGG rno:04330 NCBI chr10:88,611,586...88,619,558
Ensembl chr10:88,611,586...88,619,537
JBrowse link
G Kat2b lysine acetyltransferase 2B IEA KEGG rno:04330 NCBI chr 9:4,440,982...4,492,949 JBrowse link
G Kdm1a lysine demethylase 1A ISO PID PID:200015 NCBI chr 5:154,909,003...154,965,171
Ensembl chr 5:154,909,003...154,965,171
JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase ISS
IEA
ISO
KEGG PMID:12167404, PMID:17761886 rno:04330, RGD:727405, RGD:2302204 NCBI chr12:16,117,767...16,126,211
Ensembl chr12:16,118,634...16,126,953
JBrowse link
G Lnx1 ligand of numb-protein X 1 ISO PID PID:200015 NCBI chr14:36,047,136...36,149,740
Ensembl chr14:36,047,144...36,149,740
JBrowse link
G Maml1 mastermind-like transcriptional coactivator 1 ISO
IEA
KEGG
PID
PMID:17761886 PID:200015, rno:04330, RGD:2302204 NCBI chr10:35,765,196...35,801,375
Ensembl chr10:35,765,719...35,800,120
JBrowse link
G Maml2 mastermind-like transcriptional coactivator 2 ISO
IEA
KEGG
PID
PMID:17761886 PID:200015, rno:04330, RGD:2302204 NCBI chr 8:11,929,238...12,253,991
Ensembl chr 8:11,931,767...12,251,099
JBrowse link
G Maml3 mastermind-like transcriptional coactivator 3 ISO RGD PMID:17761886 RGD:2302204 NCBI chr 2:140,734,138...141,276,886 JBrowse link
G Mark2 microtubule affinity regulating kinase 2 ISO PID PID:200015 NCBI chr 1:222,525,547...222,590,727
Ensembl chr 1:222,525,990...222,590,220
JBrowse link
G Mfap2 microfibril associated protein 2 ISO PID PID:200015 NCBI chr 5:159,534,202...159,539,750
Ensembl chr 5:159,534,202...159,539,750
JBrowse link
G Mfap5 microfibril associated protein 5 ISO PID PID:200015 NCBI chr 4:155,313,671...155,336,228
Ensembl chr 4:155,313,671...155,336,228
JBrowse link
G Mfng MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase ISS
IEA
ISO
KEGG PMID:9187150, PMID:17761886 rno:04330, RGD:1302739, RGD:2302204 NCBI chr 7:119,978,981...119,996,824
Ensembl chr 7:119,978,983...119,996,824
JBrowse link
G Mib1 mindbomb E3 ubiquitin protein ligase 1 ISO PID PMID:12530964 PID:200015, RGD:1334454 NCBI chr18:1,970,914...2,094,920
Ensembl chr18:1,970,914...2,094,920
JBrowse link
G Myc MYC proto-oncogene, bHLH transcription factor ISO PID PID:200015 NCBI chr 7:102,586,313...102,591,240
Ensembl chr 7:102,586,313...102,591,240
JBrowse link
G Mycbp Myc binding protein ISO PID PID:200015 NCBI chr 5:141,560,192...141,567,399
Ensembl chr 5:141,560,192...141,567,399
JBrowse link
G Ncor1 nuclear receptor co-repressor 1 ISO PID PID:200015 NCBI chr10:48,629,121...48,772,890
Ensembl chr10:48,629,121...48,772,890
JBrowse link
G Ncor2 nuclear receptor co-repressor 2 ISO
IEA
PID
KEGG
PID:200015, rno:04330 NCBI chr12:36,871,917...37,033,701
Ensembl chr12:36,871,999...37,033,701
JBrowse link
G Ncstn nicastrin TAS
IEA
ISO
KEGG
PID
PMID:12736250, PMID:17761886 PID:200015, rno:04330, RGD:724403, RGD:2302204 NCBI chr13:90,451,046...90,467,256
Ensembl chr13:90,451,044...90,467,256
JBrowse link
G Neurl1 neuralized E3 ubiquitin protein ligase 1 ISO RGD PMID:14986688 RGD:1334462 NCBI chr 1:266,953,006...267,038,879
Ensembl chr 1:266,952,561...267,038,883
JBrowse link
G Neurl2 neuralized E3 ubiquitin protein ligase 2 ISO RGD PMID:14986688 RGD:1334462 NCBI chr 3:161,296,303...161,299,024
Ensembl chr 3:161,296,304...161,299,024
JBrowse link
G Notch1 notch receptor 1 IDA
IEA
ISO
IMP
KEGG
PID
PMID:11900468, PMID:15247148, PMID:15057910, PMID:17761886, PMID:12853432 PID:200015, rno:04330, RGD:724389, RGD:2306423, RGD:1334443, RGD:2302204, RGD:1358543 NCBI chr 3:3,905,562...3,951,015
Ensembl chr 3:3,905,453...3,951,025
JBrowse link
G Notch2 notch receptor 2 TAS
IEA
ISO
KEGG
PID
PMID:1295745, PMID:17761886 PID:200015, rno:04330, RGD:69906, RGD:2302204 NCBI chr 2:200,187,184...200,320,403
Ensembl chr 2:200,187,179...200,320,215
JBrowse link
G Notch3 notch receptor 3 IDA
IEA
ISO
KEGG
PID
PMID:11971902, PMID:15247148, PMID:17761886 PID:200015, rno:04330, RGD:625426, RGD:2306423, RGD:2302204 NCBI chr 7:14,138,495...14,189,688
Ensembl chr 7:14,138,495...14,189,688
JBrowse link
G Notch4 notch receptor 4 IDA
IEA
ISO
KEGG
PID
PMID:10964583, PMID:17761886 PID:200015, rno:04330, RGD:1304484, RGD:2302204 NCBI chr20:4,329,794...4,353,868
Ensembl chr20:4,329,811...4,353,785
JBrowse link
G Numb NUMB, endocytic adaptor protein TAS
IEA
ISO
KEGG
PID
PMID:12500307 PID:200015, rno:04330, RGD:724390 NCBI chr 6:107,279,917...107,325,345
Ensembl chr 6:107,279,920...107,325,345
JBrowse link
G Numbl NUMB-like, endocytic adaptor protein ISO
IEA
KEGG PMID:15492044 rno:04330, RGD:1334451 NCBI chr 1:84,067,841...84,091,659
Ensembl chr 1:84,067,938...84,091,671
JBrowse link
G Pofut1 protein O-fucosyltransferase 1 ISS
ISO
RGD PMID:14570055, PMID:17761886 RGD:1334453, RGD:2302204 NCBI chr 3:148,722,864...148,749,743
Ensembl chr 3:148,722,955...148,747,208
JBrowse link
G Psen1 presenilin 1 TAS
IEA
ISO
KEGG
PID
PMID:12736250, PMID:17761886 PID:200015, rno:04330, RGD:724403, RGD:2302204 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Psen2 presenilin 2 ISO
IEA
KEGG PMID:17761886 rno:04330, RGD:2302204 NCBI chr13:98,513,600...98,539,347
Ensembl chr13:98,513,570...98,530,724
JBrowse link
G Psenen presenilin enhancer gamma secretase subunit ISO
IEA
KEGG
PID
PMID:17761886 PID:200015, rno:04330, RGD:2302204 NCBI chr 1:89,016,093...89,017,449
Ensembl chr 1:89,016,096...89,017,290
JBrowse link
G Ptcra pre T-cell antigen receptor alpha IEA KEGG rno:04330 NCBI chr 9:16,528,970...16,539,383
Ensembl chr 9:16,529,579...16,539,472
JBrowse link
G Rab11a RAB11a, member RAS oncogene family ISO PID PID:200015 NCBI chr 8:70,192,975...70,215,719
Ensembl chr 8:70,192,975...70,215,719
JBrowse link
G Rbbp8 RB binding protein 8, endonuclease ISO PID PID:200015 NCBI chr18:3,134,630...3,227,702
Ensembl chr18:3,162,543...3,227,688
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region IDA
IEA
ISO
KEGG
PID
PMID:15247148 PID:200015, rno:04330, RGD:2306423 NCBI chr14:59,657,738...59,865,427
Ensembl chr14:59,658,935...59,735,450
JBrowse link
G Rbpjl recombination signal binding protein for immunoglobulin kappa J region-like IEA KEGG rno:04330 NCBI chr 3:160,851,836...160,865,125
Ensembl chr 3:160,852,164...160,864,534
JBrowse link
G Rbpjl2 recombination signal binding protein for immunoglobulin kappa J region-like 2 IEA KEGG rno:04330 NCBI chr 5:4,877,924...4,879,637
Ensembl chr 5:4,679,515...4,879,634
JBrowse link
G Rfng RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase IMP
IEA
ISO
KEGG PMID:11165380, PMID:17761886 rno:04330, RGD:633801, RGD:2302204 NCBI chr10:109,963,726...109,966,821
Ensembl chr10:109,943,817...109,966,826
JBrowse link
G Skp1 S-phase kinase-associated protein 1 ISO PID PID:200015 NCBI chr10:37,594,578...37,609,498
Ensembl chr10:37,594,578...37,609,498
JBrowse link
G Skp2 S-phase kinase associated protein 2 ISO PID PID:200015 NCBI chr 2:58,506,146...58,534,211
Ensembl chr 2:58,506,151...58,534,211
JBrowse link
G Snw1 SNW domain containing 1 IEA KEGG rno:04330 NCBI chr 6:111,483,698...111,507,782
Ensembl chr 6:111,483,703...111,507,782
JBrowse link
G Spen spen family transcriptional repressor ISO PID PID:200015 NCBI chr 5:160,015,573...160,070,915
Ensembl chr 5:160,015,454...160,070,965
JBrowse link
G Sspo SCO-spondin ISO PID PID:200015 NCBI chr 4:78,076,695...78,133,676
Ensembl chr 4:78,080,310...78,133,654
JBrowse link
G Yy1 YY1 transcription factor ISO PID PID:200015 NCBI chr 6:132,702,443...132,726,848
Ensembl chr 6:132,702,448...132,727,046
JBrowse link
syndecan signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn1 actinin, alpha 1 ISO PID PID:200134 NCBI chr 6:103,376,557...103,470,497
Ensembl chr 6:103,375,799...103,470,555
JBrowse link
G Adam12 ADAM metallopeptidase domain 12 ISO PID PID:200134 NCBI chr 1:205,951,840...206,286,294
Ensembl chr 1:205,956,342...206,282,575
JBrowse link
G Agrp agouti related neuropeptide ISO PID PID:200198 NCBI chr19:37,525,941...37,584,875
Ensembl chr19:37,526,419...37,528,011
JBrowse link
G Aph1a aph-1 homolog A, gamma secretase subunit ISO PID PID:200198 NCBI chr 2:198,006,247...198,009,837
Ensembl chr 2:198,006,316...198,009,830
JBrowse link
G Aph1b aph-1 homolog B, gamma secretase subunit ISO PID PID:200198 NCBI chr 8:72,508,008...72,598,921
Ensembl chr 8:72,476,425...72,629,265
JBrowse link
G Bax BCL2 associated X, apoptosis regulator ISO PID PID:200192 NCBI chr 1:101,451,801...101,457,207
Ensembl chr 1:101,451,802...101,457,207
JBrowse link
G Bsg basigin (Ok blood group) ISO PID PID:200156 NCBI chr 7:12,875,536...12,882,753
Ensembl chr 7:12,875,537...12,882,753
JBrowse link
G Cask calcium/calmodulin dependent serine protein kinase ISO PID PID:200156, PID:200192, PID:200198 NCBI chr  X:9,815,652...10,156,155
Ensembl chr  X:9,815,652...10,156,155
JBrowse link
G Casp3 caspase 3 ISO PID PID:200192 NCBI chr16:48,845,011...48,863,249
Ensembl chr16:48,845,012...48,863,204
JBrowse link
G Cav2 caveolin 2 ISO PID PID:200192 NCBI chr 4:44,573,264...44,580,640
Ensembl chr 4:44,573,264...44,580,638
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 ISO PID PID:200134, PID:200156 NCBI chr10:70,739,764...70,744,303
Ensembl chr10:70,739,800...70,744,315
JBrowse link
G Cdk15 cyclin-dependent kinase 15 ISO PID PID:200134 NCBI chr 9:66,059,765...66,153,729
Ensembl chr 9:66,058,047...66,148,087
JBrowse link
G Col10a1 collagen type X alpha 1 chain ISO PID PID:200156 NCBI chr20:41,180,295...41,190,664
Ensembl chr20:41,184,287...41,189,633
JBrowse link
G Col11a1 collagen type XI alpha 1 chain ISO PID PID:200156 NCBI chr 2:216,863,423...217,056,523
Ensembl chr 2:216,863,428...217,056,523
JBrowse link
G Col11a2 collagen type XI alpha 2 chain ISO PID PID:200156 NCBI chr20:3,829,324...3,859,022
Ensembl chr20:3,830,164...3,859,018
JBrowse link
G Col12a1 collagen type XII alpha 1 chain ISO PID PID:200156 NCBI chr 8:87,042,820...87,150,701
Ensembl chr 8:87,040,799...87,158,368
JBrowse link
G Col13a1 collagen type XIII alpha 1 chain ISO PID PID:200156 NCBI chr20:31,456,502...31,598,360
Ensembl chr20:31,456,852...31,598,118
JBrowse link
G Col14a1 collagen type XIV alpha 1 chain ISO PID PID:200156 NCBI chr 7:95,054,877...95,274,073
Ensembl chr 7:95,074,236...95,273,298
JBrowse link
G Col15a1 collagen type XV alpha 1 chain ISO PID PID:200156 NCBI chr 5:62,840,360...62,950,240 JBrowse link
G Col16a1 collagen type XVI alpha 1 chain ISO PID PID:200156 NCBI chr 5:148,257,030...148,311,645
Ensembl chr 5:148,257,642...148,311,645
JBrowse link
G Col17a1 collagen type XVII alpha 1 chain ISO PID PID:200156 NCBI chr 1:267,416,681...267,465,049
Ensembl chr 1:267,417,459...267,463,705
JBrowse link
G Col1a1 collagen type I alpha 1 chain ISO PID PID:200156 NCBI chr10:82,745,801...82,762,790
Ensembl chr10:82,745,801...82,762,789
JBrowse link
G Col1a2 collagen type I alpha 2 chain ISO PID PID:200156 NCBI chr 4:31,534,225...31,569,152
Ensembl chr 4:31,534,225...31,569,151
JBrowse link
G Col2a1 collagen type II alpha 1 chain ISO PID PID:200156 NCBI chr 7:139,454,945...139,484,403
Ensembl chr 7:139,455,242...139,483,997
JBrowse link
G Col3a1 collagen type III alpha 1 chain ISO PID PID:200156 NCBI chr 9:52,023,295...52,059,221
Ensembl chr 9:52,023,295...52,059,217
JBrowse link
G Col4a1 collagen type IV alpha 1 chain ISO PID PID:200156 NCBI chr16:83,522,162...83,632,153
Ensembl chr16:83,522,162...83,632,153
JBrowse link
G Col4a3 collagen type IV alpha 3 chain ISO PID PID:200156 NCBI chr 9:88,357,528...88,484,735
Ensembl chr 9:88,357,556...88,485,830
JBrowse link
G Col4a4 collagen type IV alpha 4 chain ISO PID PID:200156 NCBI chr 9:88,314,763...88,357,183
Ensembl chr 9:88,232,455...88,357,182
JBrowse link
G Col4a5 collagen type IV alpha 5 chain ISO PID PID:200156 NCBI chr  X:112,769,595...112,983,720
Ensembl chr  X:112,769,645...112,983,685
JBrowse link
G Col4a6 collagen type IV alpha 6 chain ISO PID PID:200156 NCBI chr  X:112,405,647...112,768,337
Ensembl chr  X:112,405,647...112,473,822
JBrowse link
G Col5a1 collagen type V alpha 1 chain ISO PID PID:200156 NCBI chr 3:6,430,180...6,581,010
Ensembl chr 3:6,430,201...6,578,882
JBrowse link
G Col5a2 collagen type V alpha 2 chain ISO PID PID:200156 NCBI chr 9:52,091,088...52,238,735
Ensembl chr 9:52,092,511...52,238,564
JBrowse link
G Col6a1 collagen type VI alpha 1 chain ISO PID PID:200156 NCBI chr20:12,657,913...12,676,370
Ensembl chr20:12,658,065...12,675,561
JBrowse link
G Col6a2 collagen type VI alpha 2 chain ISO PID PID:200156 NCBI chr20:12,773,472...12,801,179
Ensembl chr20:12,773,427...12,801,180
JBrowse link
G Col6a3 collagen type VI alpha 3 chain ISO PID PID:200156 NCBI chr 9:97,926,784...98,004,643
Ensembl chr 9:97,926,787...98,004,546
JBrowse link
G Col7a1 collagen type VII alpha 1 chain ISO PID PID:200156 NCBI chr 8:117,694,441...117,726,844
Ensembl chr 8:117,694,605...117,726,844
JBrowse link
G Col8a1 collagen type VIII alpha 1 chain ISO PID PID:200156 NCBI chr11:44,877,690...45,006,203
Ensembl chr11:44,877,859...45,007,891
JBrowse link
G Col8a2 collagen type VIII alpha 2 chain ISO PID PID:200156 NCBI chr 5:144,308,527...144,335,142
Ensembl chr 5:144,308,611...144,335,172
JBrowse link
G Col9a1 collagen type IX alpha 1 chain ISO PID PID:200156 NCBI chr 9:30,419,001...30,502,307
Ensembl chr 9:30,419,001...30,502,298
JBrowse link
G Col9a2 collagen type IX alpha 2 chain ISO PID PID:200156 NCBI chr 5:139,962,684...139,979,865
Ensembl chr 5:139,963,002...139,979,864
JBrowse link
G Col9a3 collagen type IX alpha 3 chain ISO PID PID:200156 NCBI chr 3:176,102,287...176,124,839
Ensembl chr 3:176,102,351...176,124,306
JBrowse link
G Csf2 colony stimulating factor 2 ISO PID PID:200192 NCBI chr10:39,602,089...39,604,070
Ensembl chr10:39,602,089...39,604,070
JBrowse link
G Cttn cortactin ISO PID PID:200198 NCBI chr 1:217,602,698...217,638,196
NCBI chr 1:215,255,385...215,290,882
Ensembl chr 1:217,602,698...217,638,152
Ensembl chr 1:217,602,698...217,638,152
JBrowse link
G Cxcl12 C-X-C motif chemokine ligand 12 ISO PID PID:200134 NCBI chr 4:149,261,044...149,273,891
Ensembl chr 4:149,261,044...149,273,891
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 ISO PID PID:200134 NCBI chr13:45,314,952...45,318,856
Ensembl chr13:45,314,933...45,318,878
JBrowse link
G Dnm2 dynamin 2 ISO PID PID:200134 NCBI chr 8:22,458,869...22,540,649
Ensembl chr 8:22,458,899...22,540,524
JBrowse link
G Egfr epidermal growth factor receptor ISO PID PID:200198 NCBI chr14:99,919,485...100,104,136
Ensembl chr14:99,919,485...100,098,796
JBrowse link
G Epb41 erythrocyte membrane protein band 4.1 ISO PID PID:200192 NCBI chr 5:150,081,727...150,243,186
Ensembl chr 5:150,084,611...150,167,077
JBrowse link
G Ephb2 Eph receptor B2 ISO PID PID:200192 NCBI chr 5:155,024,478...155,143,539
Ensembl chr 5:155,022,493...155,204,456
JBrowse link
G Ezr ezrin ISO PID PID:200192 NCBI chr 1:47,287,872...47,331,412
Ensembl chr 1:47,287,874...47,331,412
JBrowse link
G F2 coagulation factor II ISO PID PID:200134 NCBI chr 3:80,529,468...80,542,993
Ensembl chr 3:80,529,428...80,543,031
JBrowse link
G Fgf2 fibroblast growth factor 2 ISO PID PID:200134 NCBI chr 2:124,081,072...124,134,133
Ensembl chr 2:124,081,072...124,134,681
JBrowse link
G Fgf6 fibroblast growth factor 6 ISO PID PID:200134 NCBI chr 4:159,563,798...159,572,333
Ensembl chr 4:159,563,798...159,572,333
JBrowse link
G Fgfr1 Fibroblast growth factor receptor 1 ISO PID PID:200134 NCBI chr16:71,265,390...71,319,046
Ensembl chr16:71,266,248...71,319,449
JBrowse link
G Fn1 fibronectin 1 ISO PID PID:200134, PID:200192 NCBI chr 9:78,900,111...78,969,018
Ensembl chr 9:78,900,103...78,969,078
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase ISO PID PID:200198 NCBI chr20:44,436,354...44,630,316
Ensembl chr20:44,436,403...44,630,317
JBrowse link
G Fzd7 frizzled class receptor 7 ISO PID PID:200134 NCBI chr 9:66,305,731...66,308,550
Ensembl chr 9:66,305,731...66,308,550
JBrowse link
G Gipc1 GIPC PDZ domain containing family, member 1 ISO PID PID:200134 NCBI chr19:24,786,604...24,798,231
Ensembl chr19:24,786,628...24,798,233
JBrowse link
G Hgf hepatocyte growth factor ISO PID PID:200156 NCBI chr 4:15,435,460...15,505,377
Ensembl chr 4:15,433,295...15,505,362
JBrowse link
G Hpse heparanase ISO PID PID:200156 NCBI chr14:10,534,358...10,576,686
Ensembl chr14:10,534,423...10,575,224
JBrowse link
G Hras HRas proto-oncogene, GTPase ISO PID PID:200192 NCBI chr 1:214,178,404...214,181,841
Ensembl chr 1:214,178,407...214,181,686
JBrowse link
G Itga2 integrin subunit alpha 2 ISO PID PID:200192 NCBI chr 2:46,996,904...47,097,011
Ensembl chr 2:47,000,323...47,096,961
JBrowse link
G Itga5 integrin subunit alpha 5 ISO PID PID:200134, PID:200192 NCBI chr 7:144,970,444...144,993,652
Ensembl chr 7:144,970,444...144,993,652
JBrowse link
G Itgb1 integrin subunit beta 1 ISO PID PID:200134, PID:200192 NCBI chr19:61,677,512...61,725,537
Ensembl chr19:61,677,542...61,725,535
JBrowse link
G Kng2 kininogen 2 ISO PID PID:200192 NCBI chr11:81,509,185...81,516,759 JBrowse link
G Lama1 laminin subunit alpha 1 ISO PID PID:200134, PID:200192 NCBI chr 9:115,916,907...116,042,123
Ensembl chr 9:115,916,907...116,042,123
JBrowse link
G Lama3 laminin subunit alpha 3 ISO PID PID:200134, PID:200192 NCBI chr18:3,704,866...3,941,215
Ensembl chr18:3,705,916...3,940,838
JBrowse link
G Lama5 laminin subunit alpha 5 ISO PID PID:200156 NCBI chr 3:175,553,042...175,601,112
Ensembl chr 3:175,553,045...175,601,127
JBrowse link
G Mapk1 mitogen activated protein kinase 1 ISO PID PID:200156, PID:200192 NCBI chr11:88,203,863...88,273,301
Ensembl chr11:88,211,599...88,273,254
JBrowse link
G Mapk3 mitogen activated protein kinase 3 ISO PID PID:200156, PID:200192 NCBI chr 1:198,192,773...198,198,975
Ensembl chr 1:198,192,773...198,198,975
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO PID PID:200192 NCBI chr16:9,620,854...9,709,342
Ensembl chr16:9,625,177...9,709,347
JBrowse link
G Mc4r melanocortin 4 receptor ISO PID PID:200198 NCBI chr18:62,612,838...62,614,725
Ensembl chr18:62,612,838...62,614,725
JBrowse link
G Mdk midkine ISO PID PID:200134 NCBI chr 3:80,841,003...80,843,895
Ensembl chr 3:80,841,005...80,842,916
JBrowse link
G Met MET proto-oncogene, receptor tyrosine kinase ISO PID PID:200156 NCBI chr 4:44,747,467...44,854,628
Ensembl chr 4:44,774,741...44,852,665
JBrowse link
G Mmp1 matrix metallopeptidase 1 ISO PID PID:200156 NCBI chr 8:5,703,206...5,723,593
Ensembl chr 8:5,703,206...5,723,591
JBrowse link
G Mmp2 matrix metallopeptidase 2 ISO PID PID:200192 NCBI chr19:15,542,771...15,570,589
Ensembl chr19:15,542,765...15,570,611
JBrowse link
G Mmp7 matrix metallopeptidase 7 ISO PID PID:200156 NCBI chr 8:5,893,253...5,900,965
Ensembl chr 8:5,893,249...5,901,049
JBrowse link
G Mmp9 matrix metallopeptidase 9 ISO PID PID:200134, PID:200156 NCBI chr 3:161,413,410...161,421,473
Ensembl chr 3:161,413,298...161,421,520
JBrowse link
G Ncan neurocan ISO PID PID:200198 NCBI chr16:21,050,243...21,076,707
Ensembl chr16:21,050,243...21,076,707
JBrowse link
G Ncstn nicastrin ISO PID PID:200198 NCBI chr13:90,451,046...90,467,256
Ensembl chr13:90,451,044...90,467,256
JBrowse link
G Nf1 neurofibromin 1 ISO PID PID:200192 NCBI chr10:66,732,460...66,928,706
Ensembl chr10:66,690,133...66,928,903
JBrowse link
G Nudt16l1 nudix hydrolase 16 like 1 ISO PID PID:200134 NCBI chr10:10,829,866...10,831,782
Ensembl chr10:10,829,867...10,831,782
JBrowse link
G Plg plasminogen ISO PID PID:200134 NCBI chr 1:48,521,828...48,563,895
Ensembl chr 1:48,521,772...48,563,776
JBrowse link
G Pomc proopiomelanocortin ISO PID PID:200198 NCBI chr 6:28,382,937...28,388,771
Ensembl chr 6:28,382,962...28,388,967
JBrowse link
G Ppib peptidylprolyl isomerase B ISO PID PID:200156 NCBI chr 8:71,719,681...71,725,538
Ensembl chr 8:71,719,563...71,725,562
JBrowse link
G Prkaca protein kinase cAMP-activated catalytic subunit alpha ISO PID PID:200156, PID:200192 NCBI chr19:25,095,089...25,118,869
Ensembl chr19:25,095,089...25,118,860
JBrowse link
G Prkca protein kinase C, alpha ISO PID PID:200134 NCBI chr10:96,186,509...96,585,168
Ensembl chr10:96,191,133...96,584,947
JBrowse link
G Prkcd protein kinase C, delta ISO PID PID:200134, PID:200192 NCBI chr16:6,655,131...6,675,746
Ensembl chr16:6,655,120...6,675,746
JBrowse link
G Psen1 presenilin 1 ISO PID PID:200198 NCBI chr 6:107,169,514...107,221,000
Ensembl chr 6:107,169,528...107,216,798
JBrowse link
G Psenen presenilin enhancer gamma secretase subunit ISO PID PID:200198 NCBI chr 1:89,016,093...89,017,449
Ensembl chr 1:89,016,096...89,017,290
JBrowse link
G Ptn pleiotrophin ISO PID PID:200198 NCBI chr 4:64,239,156...64,330,996
Ensembl chr 4:64,239,158...64,330,996
JBrowse link
G Rac1 Rac family small GTPase 1 ISO PID PID:200134 NCBI chr12:13,090,316...13,111,841
Ensembl chr12:13,090,172...13,111,873
JBrowse link
G Rack1 receptor for activated C kinase 1 ISO PID PID:200192 NCBI chr10:34,149,717...34,155,198
Ensembl chr10:34,149,717...34,155,198
Ensembl chr12:34,149,717...34,155,198
JBrowse link
G Rasa1 RAS p21 protein activator 1 ISO PID PID:200192 NCBI chr 2:13,617,021...13,696,531
Ensembl chr 2:13,616,822...13,696,426
JBrowse link
G Rhoa ras homolog family member A ISO PID PID:200134, PID:200192 NCBI chr 8:117,082,440...117,116,244
Ensembl chr 8:117,106,576...117,116,167
JBrowse link
G Sdc1 syndecan 1 ISO PID PID:200156 NCBI chr 6:33,885,576...33,908,038
Ensembl chr 6:33,885,495...33,908,016
JBrowse link
G Sdc2 syndecan 2 ISO PID PID:200192 NCBI chr 7:71,572,731...71,686,139
Ensembl chr 7:71,572,941...71,686,044
JBrowse link
G Sdc3 syndecan 3 ISO PID PID:200198 NCBI chr 5:148,923,098...148,956,404
Ensembl chr 5:148,923,098...148,956,404
JBrowse link
G Sdc4 syndecan 4 ISO PID PID:200134 NCBI chr 3:160,872,503...160,891,190
Ensembl chr 3:160,872,503...160,891,190
JBrowse link
G Sdcbp syndecan binding protein ISO PID PID:200134, PID:200156, PID:200192 NCBI chr 5:19,471,664...19,498,499
Ensembl chr 5:19,471,664...19,498,485
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO PID PID:200192, PID:200198 NCBI chr 3:153,547,807...153,595,643
Ensembl chr 3:153,580,861...153,595,642
JBrowse link
G Tfpi tissue factor pathway inhibitor ISO PID PID:200134 NCBI chr 3:71,852,738...71,902,127
Ensembl chr 3:71,852,744...71,893,618
JBrowse link
G Tgfb1 transforming growth factor, beta 1 ISO PID PID:200156, PID:200192 NCBI chr 1:82,480,875...82,497,196
Ensembl chr 1:82,480,195...82,497,199
JBrowse link
G Thbs1 thrombospondin 1 ISO PID PID:200134 NCBI chr 3:109,862,120...109,873,466
Ensembl chr 3:109,862,117...109,873,466
JBrowse link
G Tnc tenascin C ISO PID PID:200134 NCBI chr 5:79,789,686...79,874,555
Ensembl chr 5:79,789,671...79,874,671
JBrowse link
G Tnfrsf13b TNF receptor superfamily member 13B ISO PID PID:200134, PID:200192 NCBI chr10:47,399,834...47,422,907
Ensembl chr10:47,412,582...47,420,951
JBrowse link
G Trappc4 trafficking protein particle complex 4 ISO PID PID:200192 NCBI chr 8:48,723,755...48,727,182
Ensembl chr 8:48,723,191...48,727,154
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6103
    signaling pathway 2646
      cell adhesion signaling pathway 412
        altered cell adhesion signaling pathway + 26
        cell-cell signaling pathway + 253
        cell-extracellular matrix signaling pathway + 155
        integrin mediated signaling pathway + 50
paths to the root

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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.