altered signaling pathway pertinent to the brain and nervous system - Ontology Report - Rat Genome Database

	Submit Data \| Help \| Video Tutorials \| News \| Publications \| Download \| REST API \| Citing RGD \| Contact
	Search RGD Grant Resources Citing RGD About Us Contact Us Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data OntoMate (Literature Search) JBrowse (Genome Browser) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) RatMine GViewer (Genome Viewer) Overgo Probe Designer ACP Haplotyper Genome Scanner VCMap Aging & Age-Related Disease Cancer Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease Find Models new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive Pathways Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
	Advanced Search (OLGA)

PATHWAY ONTOLOGY - ANNOTATIONS	{{ watchLinkText }}
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:	altered signaling pathway pertinent to the brain and nervous system	go back to main search page
Accession:	PW:0000389	browse the term

show annotations for term's descendants Sort by:

Rat (11) Mouse (11) Human (11) Chinchilla (11) Bonobo (11) Dog (11) Squirrel (11) Pig (11) All
Genes (11)

altered Reelin signaling pathway

term browser

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

G

DAB adaptor protein 1

RGD

NCBI chr 1:56,994,778...58,546,726
Ensembl chr 1:56,994,778...58,546,734

G

FYN proto-oncogene, Src family tyrosine kinase

RGD

NCBI chr 6:111,660,332...111,873,452
Ensembl chr 6:111,660,332...111,873,452

G

integrin subunit alpha 3

RGD

NCBI chr17:50,056,065...50,090,481
Ensembl chr17:50,055,968...50,090,481

G

integrin subunit beta 1

RGD

NCBI chr10:32,900,318...32,958,230
Ensembl chr10:32,887,273...33,005,792

G

LDL receptor related protein 8

RGD

NCBI chr 1:53,242,364...53,328,070
Ensembl chr 1:53,242,364...53,328,469

G

platelet activating factor acetylhydrolase 1b regulatory subunit 1

RGD

NCBI chr17:2,593,210...2,685,617
Ensembl chr17:2,593,210...2,685,615

G

platelet activating factor acetylhydrolase 1b catalytic subunit 2

RGD

NCBI chr11:117,144,287...117,178,173
Ensembl chr11:117,144,284...117,176,894

G

platelet activating factor acetylhydrolase 1b catalytic subunit 3

RGD

NCBI chr19:42,297,033...42,302,800
Ensembl chr19:42,297,033...42,303,546

G

reelin

RGD

NCBI chr 7:103,471,789...103,989,658
Ensembl chr 7:103,471,381...103,989,658

G

SRC proto-oncogene, non-receptor tyrosine kinase

RGD

NCBI chr20:37,344,690...37,406,050
Ensembl chr20:37,344,685...37,406,050

G

very low density lipoprotein receptor

RGD

NCBI chr 9:2,621,786...2,660,056
Ensembl chr 9:2,621,182...2,660,056

Term paths to the root

Path 1
Term	Annotations
pathway	5957
signaling pathway	2503
altered signaling pathway	107
altered signaling pathway pertinent to the brain and nervous system	11
altered Reelin signaling pathway	11
altered dopamine signaling pathway	0
altered neurotrophic factor signaling pathway +	0

paths to the root