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Pathways
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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:terpenoid biosynthetic pathway
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Accession:PW:0000184 term browser browse the term
Definition:Those metabolic reactions involved in the synthesis of terpenoids. The terpenoids, sometimes referred to as isoprenoids, are a class of naturally-occurring chemicals. Terpenoids are derived from five-carbon isoprene units and are assembled and modified in manifold ways. They are classified according to the number of isoprene units. The mevalonate pathway and the non-mevalonate MEP/DOXP pathway are the two biosynthetic routes. The first can branch into non-sterol and sterol-producing compounds. The second is only found in plants.
Synonyms:related_synonym: terpenoid biosynthetic process


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terpenoid biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acat1 acetyl-CoA acetyltransferase 1 IEA KEGG rno:00900 NCBI chr 8:62,876,003...62,905,080
Ensembl chr 8:62,876,003...62,905,042 		JBrowse link
G Acat2 acetyl-CoA acetyltransferase 2 IEA KEGG rno:00900 NCBI chr 1:50,100,840...50,118,886
Ensembl chr 1:50,100,817...50,135,095 		JBrowse link
G Dhdds dehydrodolichyl diphosphate synthase subunit IEA KEGG rno:00900 NCBI chr 5:151,482,139...151,508,248
Ensembl chr 5:151,481,429...151,508,129 		JBrowse link
G Fdps farnesyl diphosphate synthase IEA KEGG rno:00900 NCBI chr 2:176,795,192...176,804,816
Ensembl chr 2:176,795,192...176,807,136 		JBrowse link
G Ggps1 geranylgeranyl diphosphate synthase 1 IEA KEGG rno:00900 NCBI chr17:55,958,750...55,982,762
Ensembl chr17:55,958,755...55,971,709 		JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase IEA KEGG rno:00900 NCBI chr 2:29,732,163...29,754,276
Ensembl chr 2:29,720,553...29,754,533 		JBrowse link
G Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 IEA KEGG rno:00900 NCBI chr 2:53,379,457...53,399,807
Ensembl chr 2:53,382,643...53,399,802 		JBrowse link
G Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 IEA KEGG rno:00900 NCBI chr 2:188,564,348...188,590,872
Ensembl chr 2:188,547,767...188,592,242 		JBrowse link
G Idi1 isopentenyl-diphosphate delta isomerase 1 IEA KEGG rno:00900 NCBI chr17:66,539,761...66,547,524
Ensembl chr17:66,539,763...66,547,524 		JBrowse link
G Idi2l3 isopentenyl-diphosphate delta isomerase 2 like 3 IEA KEGG rno:00900 NCBI chr17:66,243,932...66,258,028 JBrowse link
G Mvd mevalonate diphosphate decarboxylase IEA KEGG rno:00900 NCBI chr19:67,404,911...67,414,974
Ensembl chr19:67,404,911...67,422,366 		JBrowse link
G Mvk mevalonate kinase IEA KEGG rno:00900 NCBI chr12:47,802,002...47,819,503
Ensembl chr12:47,802,002...47,819,503 		JBrowse link
G Pdss2 decaprenyl diphosphate synthase subunit 2 IEA KEGG rno:00900 NCBI chr20:48,291,788...48,520,846
Ensembl chr20:48,291,797...48,535,689 		JBrowse link
G Pmvk phosphomevalonate kinase IEA KEGG rno:00900 NCBI chr 2:177,174,344...177,184,076
Ensembl chr 2:177,174,335...177,184,080 		JBrowse link
monoterpenoid biosynthetic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aox1 aldehyde oxidase 1 IEA KEGG rno:00760 NCBI chr 9:67,073,831...67,152,980
Ensembl chr 9:67,073,821...67,152,980 		JBrowse link
G Aox2 aldehyde oxidase 2 IEA KEGG rno:00760 NCBI chr 9:67,322,291...67,411,694
Ensembl chr 9:67,322,598...67,410,363 		JBrowse link
G Bst1 bone marrow stromal cell antigen 1 IEA KEGG rno:00760 NCBI chr14:71,466,179...71,482,671
Ensembl chr14:71,466,180...71,482,647 		JBrowse link
G Cd38 CD38 molecule IEA KEGG rno:00760 NCBI chr14:71,384,532...71,424,794
Ensembl chr14:71,384,532...71,424,505 		JBrowse link
G Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 IEA KEGG rno:00760 NCBI chr 1:22,518,051...22,583,044
Ensembl chr 1:22,518,069...22,583,044 		JBrowse link
G Enpp3 ectonucleotide pyrophosphatase/phosphodiesterase 3 IEA KEGG rno:00760 NCBI chr 1:22,382,717...22,454,324
Ensembl chr 1:22,382,964...22,454,314 		JBrowse link
G Nadk NAD kinase IEA KEGG rno:00760 NCBI chr 5:171,427,973...171,458,586
Ensembl chr 5:171,428,000...171,458,579 		JBrowse link
G Nadsyn1 NAD synthetase 1 IEA KEGG rno:00760 NCBI chr 1:208,410,914...208,439,242
Ensembl chr 1:208,410,914...208,439,207 		JBrowse link
G Nampt nicotinamide phosphoribosyltransferase IEA KEGG rno:00760 NCBI chr 6:55,152,756...55,189,547
Ensembl chr 6:55,151,926...55,189,544 		JBrowse link
G Naprt nicotinate phosphoribosyltransferase IEA KEGG rno:00760 NCBI chr 7:109,457,328...109,460,817
Ensembl chr 7:109,457,378...109,460,817 		JBrowse link
G Nmnat1 nicotinamide nucleotide adenylyltransferase 1 IEA KEGG rno:00760 NCBI chr 5:165,193,301...165,211,213
Ensembl chr 5:165,193,302...165,211,231 		JBrowse link
G Nmnat2 nicotinamide nucleotide adenylyltransferase 2 IEA KEGG rno:00760 NCBI chr13:67,655,794...67,831,609
Ensembl chr13:67,655,807...67,831,608 		JBrowse link
G Nnmt nicotinamide N-methyltransferase IEA KEGG rno:00760 NCBI chr 8:57,820,156...57,851,301
Ensembl chr 8:57,825,464...57,843,174 		JBrowse link
G Nnt nicotinamide nucleotide transhydrogenase IEA KEGG rno:00760 NCBI chr 2:53,144,157...53,237,857
Ensembl chr 2:53,144,160...53,237,310 		JBrowse link
G Nt5c1a 5'-nucleotidase, cytosolic IA IEA KEGG rno:00760 NCBI chr 5:140,758,219...140,782,706
Ensembl chr 5:140,757,729...140,778,968 		JBrowse link
G Nt5c1b 5'-nucleotidase, cytosolic IB IEA KEGG rno:00760 NCBI chr 6:38,858,182...38,875,610
Ensembl chr 6:38,858,215...38,875,968 		JBrowse link
G Nt5c3a 5'-nucleotidase, cytosolic IIIA IEA KEGG rno:00760 NCBI chr 4:87,491,828...87,534,838
Ensembl chr 4:87,491,828...87,534,838 		JBrowse link
G Nt5e 5' nucleotidase, ecto IEA KEGG rno:00760 NCBI chr 8:98,150,925...98,195,646
Ensembl chr 8:98,150,900...98,195,645 		JBrowse link
G Nt5m 5',3'-nucleotidase, mitochondrial IEA KEGG rno:00760 NCBI chr10:45,151,902...45,178,687
Ensembl chr10:45,152,505...45,181,308 		JBrowse link
G Nudt12 nudix hydrolase 12 IEA KEGG rno:00760 NCBI chr 9:106,188,930...106,202,340
Ensembl chr 9:106,189,661...106,202,340 		JBrowse link
G Qprt quinolinate phosphoribosyltransferase IEA KEGG rno:00760 NCBI chr 1:191,148,715...191,164,006
Ensembl chr 1:191,148,713...191,194,162 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6091
    classic metabolic pathway 1852
      metabolic pathway of secondary metabolites 48
        terpene and terpenoid metabolic pathway 35
          terpene and terpenoid biosynthetic pathway 35
            terpenoid biosynthetic pathway 35
              diterpenoid biosynthetic pathway 0
              monoterpenoid biosynthetic pathway 21
paths to the root