PATHWAY ONTOLOGY - ANNOTATIONS
The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml ).
Term: retinol metabolic pathway
Accession: PW:0000141
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Definition: Those reactions involving retinol, a fat-soluble vitamin that is the dietary form of vitamin A and is important for bone growth and in vision. Precursors of retinol such as carotenoid or retinyl esters are derived from diet and are converted to retinal and retinol, respectively.
Synonyms: related_synonym: Retinoid metabolism and transport; retinol metabolic process
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Abca1
ATP binding cassette subfamily A member 1
ISO
RGD
PMID:21718801
RGD:6484679
NCBI chrNW_004936559:7,177,887...7,312,660
Ensembl chrNW_004936559:7,177,904...7,312,741
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Aldh1a1
aldehyde dehydrogenase 1 family member A1
ISO
SMPDB
SMP:00074
NCBI chrNW_004936503:8,869,073...8,953,726
Ensembl chrNW_004936503:8,868,961...8,918,532
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Aldh1a2
aldehyde dehydrogenase 1 family member A2
ISO
RGD SMPDB
PMID:12547725
RGD:1576367 SMP:00074
NCBI chrNW_004936471:19,175,997...19,263,335
Ensembl chrNW_004936471:19,175,992...19,263,335
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Awat1
acyl-CoA wax alcohol acyltransferase 1
ISO
SMPDB
SMP:00074
NCBI chrNW_004936762:1,238,239...1,244,330
Ensembl chrNW_004936762:1,238,473...1,244,330
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Bco1
beta-carotene oxygenase 1
ISO
SMPDB RGD
PMID:21569862 PMID:21718801
RGD:6484679 RGD:6903956 SMP:00074
NCBI chrNW_004936475:28,859,222...28,890,407
Ensembl chrNW_004936475:28,859,318...28,889,934
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Cd36
CD36 molecule (CD36 blood group)
ISO
RGD
PMID:21718801
RGD:6484679
NCBI chrNW_004936810:791,823...838,303
Ensembl chrNW_004936810:758,182...838,365
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Dgat1
diacylglycerol O-acyltransferase 1
ISO
SMPDB
SMP:00074
NCBI chrNW_004936470:7,916,438...7,926,089
Ensembl chrNW_004936470:7,916,438...7,926,088
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Dhrs3
dehydrogenase/reductase 3
ISO
SMPDB
SMP:00074
NCBI chrNW_004936474:1,237,177...1,270,299
Ensembl chrNW_004936474:1,235,962...1,269,510
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Dhrs9
dehydrogenase/reductase 9
ISO
SMPDB
SMP:00074
NCBI chrNW_004936469:10,465,701...10,487,534
Ensembl chrNW_004936469:10,465,701...10,487,534
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Dnajb11
DnaJ heat shock protein family (Hsp40) member B11
ISO
SMPDB
SMP:00074
NCBI chrNW_004936578:3,360,259...3,374,634
Ensembl chrNW_004936578:3,360,259...3,374,612
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Erp29
endoplasmic reticulum protein 29
ISO
SMPDB
SMP:00074
NCBI chrNW_004936558:4,531,397...4,538,943
Ensembl chrNW_004936558:4,531,471...4,538,943
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Hsp90b1
heat shock protein 90 beta family member 1
ISO
SMPDB
SMP:00074
NCBI chrNW_004936492:10,513,908...10,528,281
Ensembl chrNW_004936492:10,513,908...10,528,285
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Hspa5
heat shock protein family A (Hsp70) member 5
ISO
SMPDB
SMP:00074
NCBI chrNW_004936487:13,348,465...13,352,717
Ensembl chrNW_004936487:13,348,465...13,352,717
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Hyou1
hypoxia up-regulated 1
ISO
SMPDB
SMP:00074
NCBI chrNW_004936542:4,005,616...4,018,135
Ensembl chrNW_004936542:4,005,610...4,018,135
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LOC101965278
retinol dehydrogenase 16
ISO
SMPDB
SMP:00074
NCBI chrNW_004936646:1,195,200...1,200,778
Ensembl chrNW_004936646:1,194,547...1,200,897
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LOC101977861
cytochrome P450 26A1
ISO
SMPDB
SMP:00074
NCBI chrNW_004936601:1,810,572...1,815,927
Ensembl chrNW_004936601:1,809,992...1,814,074
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Lrat
lecithin retinol acyltransferase
ISO
SMPDB RGD
PMID:21718801
RGD:6484679 SMP:00074
NCBI chrNW_004936576:1,491,480...1,498,568
Ensembl chrNW_004936576:1,492,297...1,501,917
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Pdia2
protein disulfide isomerase family A member 2
ISO
SMPDB
SMP:00074
NCBI chrNW_004936501:634,034...637,177
Ensembl chrNW_004936501:634,118...637,000
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Pdia4
protein disulfide isomerase family A member 4
ISO
SMPDB
SMP:00074
NCBI chrNW_004936527:5,189,189...5,210,621
Ensembl chrNW_004936527:5,188,463...5,210,629
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Pdia6
protein disulfide isomerase family A member 6
ISO
SMPDB
SMP:00074
NCBI chrNW_004936532:6,865,994...6,887,396
Ensembl chrNW_004936532:6,865,994...6,881,475
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Plb1
phospholipase B1
ISO
RGD
PMID:8117729 PMID:21718801
RGD:6484679 RGD:6903951
NCBI chrNW_004936493:4,112,632...4,210,882
Ensembl chrNW_004936493:4,112,858...4,232,492
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Pnpla4
patatin like phospholipase domain containing 4
ISO
SMPDB
SMP:00074
NCBI chrNW_004936644:1,091,794...1,113,621
Ensembl chrNW_004936644:1,093,388...1,112,557
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Ppib
peptidylprolyl isomerase B
ISO
SMPDB
SMP:00074
NCBI chrNW_004936471:24,633,769...24,640,246
Ensembl chrNW_004936471:24,632,311...24,640,316
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Rbp2
retinol binding protein 2
ISO
RGD
PMID:21718801
RGD:6484679
NCBI chrNW_004936540:1,547,406...1,571,374
Ensembl chrNW_004936540:1,547,386...1,571,430
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Rdh11
retinol dehydrogenase 11
ISO
SMPDB
SMP:00074
NCBI chrNW_004936495:11,065,946...11,082,104
Ensembl chrNW_004936495:11,066,660...11,082,044
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Rdh12
retinol dehydrogenase 12
ISO
SMPDB
SMP:00074
NCBI chrNW_004936495:11,111,247...11,121,976
Ensembl chrNW_004936495:11,111,105...11,121,341
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Rdh8
retinol dehydrogenase 8
ISO
SMPDB
SMP:00074
NCBI chrNW_004936659:439,541...445,645
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Retsat
retinol saturase
ISO
SMPDB
SMP:00074
NCBI chrNW_004936712:1,826,813...1,837,048
Ensembl chrNW_004936712:1,826,923...1,841,141
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Rpe65
retinoid isomerohydrolase RPE65
ISO
SMPDB
SMP:00074
NCBI chrNW_004936591:3,347,346...3,368,062
Ensembl chrNW_004936591:3,347,272...3,368,015
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Scarb1
scavenger receptor class B member 1
ISO
RGD
PMID:21718801
RGD:6484679
NCBI chrNW_004936558:530,828...555,098
Ensembl chrNW_004936558:530,828...552,892
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Sdf2l1
stromal cell derived factor 2 like 1
ISO
SMPDB
SMP:00074
NCBI chrNW_004936619:2,049,920...2,051,944
Ensembl chrNW_004936619:2,049,922...2,051,944
Term paths to the root one shortest all shortest one longest all longest one shortest and longest all