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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (https://rgd.mcw.edu/rgdweb/contact/contactus.html).
Term:glycine, serine and threonine metabolic pathway
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Accession:PW:0000047 term browser browse the term
Definition:Those metabolic reactions involved in the synthesis of glycine, serine and threonine and which are intimately connected with serine being synthesized from glycine and threonine.
Comment:Definition compiled based on the information available at oneLook
Synonyms:related_synonym: KEGG:00260


show annotations for term's descendants           Sort by:
glycine, serine and threonine metabolic pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agxt alanine--glyoxylate aminotransferase IEA KEGG rno:00260 NCBI chr 9:101,122,793...101,132,746
Ensembl chr 9:101,122,793...101,132,745 		JBrowse link
G Agxt2 alanine-glyoxylate aminotransferase 2 IEA KEGG rno:00260 NCBI chr 2:61,063,416...61,104,828
Ensembl chr 2:61,063,419...61,105,090 		JBrowse link
G Alas1 5'-aminolevulinate synthase 1 IEA KEGG rno:00260 NCBI chr 8:115,755,238...115,768,642
Ensembl chr 8:115,755,238...115,768,642 		JBrowse link
G Alas2 5'-aminolevulinate synthase 2 IEA KEGG rno:00260 NCBI chr  X:22,890,650...22,914,046
Ensembl chr  X:22,890,689...22,914,043 		JBrowse link
G Aldh7a1 aldehyde dehydrogenase 7 family, member A1 IEA KEGG rno:00260 NCBI chr18:52,208,035...52,240,293
Ensembl chr18:52,204,161...52,240,467 		JBrowse link
G Amt aminomethyltransferase IEA KEGG rno:00260 NCBI chr 8:117,859,700...117,866,692
Ensembl chr 8:117,860,345...117,866,803 		JBrowse link
G Aoc3 amine oxidase, copper containing 3 IEA KEGG rno:00260 NCBI chr10:86,773,018...86,780,961 JBrowse link
G Bhmt betaine-homocysteine S-methyltransferase IEA KEGG rno:00260 NCBI chr 2:26,594,852...26,614,429
Ensembl chr 2:26,594,854...26,614,715 		JBrowse link
G Cbs cystathionine beta synthase IEA KEGG rno:00260 NCBI chr20:9,709,394...9,733,925
Ensembl chr20:9,709,395...9,734,066 		JBrowse link
G Chdh choline dehydrogenase IEA KEGG rno:00260 NCBI chr16:5,199,738...5,232,067
Ensembl chr16:5,200,763...5,232,997 		JBrowse link
G Cth cystathionine gamma-lyase IEA KEGG rno:00260 NCBI chr 2:249,634,731...249,661,066
Ensembl chr 2:249,634,731...249,661,066 		JBrowse link
G Dao D-amino-acid oxidase IEA KEGG rno:00260 NCBI chr12:48,252,900...48,275,964
Ensembl chr12:48,252,902...48,273,300 		JBrowse link
G Dld dihydrolipoamide dehydrogenase IEA KEGG rno:00260 NCBI chr 6:53,631,686...53,655,059
Ensembl chr 6:53,619,631...53,652,354 		JBrowse link
G Dmgdh dimethylglycine dehydrogenase IEA KEGG rno:00260 NCBI chr 2:26,647,540...26,722,496
Ensembl chr 2:26,647,565...26,723,071 		JBrowse link
G Gamt guanidinoacetate N-methyltransferase IEA KEGG rno:00260 NCBI chr 7:10,099,267...10,102,083
Ensembl chr 7:10,098,571...10,102,083 		JBrowse link
G Gatm glycine amidinotransferase IEA KEGG rno:00260 NCBI chr 3:130,112,508...130,137,664
Ensembl chr 3:130,112,509...130,129,355 		JBrowse link
G Gcat glycine C-acetyltransferase IEA KEGG rno:00260 NCBI chr 7:112,475,572...112,481,920
Ensembl chr 7:112,475,496...112,482,664 		JBrowse link
G Gldc glycine decarboxylase IEA KEGG rno:00260 NCBI chr 1:237,296,753...237,375,620
Ensembl chr 1:237,296,753...237,375,604 		JBrowse link
G Glyctk glycerate kinase IEA KEGG rno:00260 NCBI chr 8:115,676,071...115,681,403
Ensembl chr 8:115,676,072...115,681,091 		JBrowse link
G Gnmt glycine N-methyltransferase IEA KEGG rno:00260 NCBI chr 9:21,752,235...21,756,368
Ensembl chr 9:21,752,266...21,755,692 		JBrowse link
G Maoa monoamine oxidase A IEA KEGG rno:00260 NCBI chr  X:8,615,239...8,681,372
Ensembl chr  X:8,615,239...8,682,631 		JBrowse link
G Maob monoamine oxidase B IEA KEGG rno:00260 NCBI chr  X:8,490,405...8,594,065
Ensembl chr  X:8,490,344...8,594,375 		JBrowse link
G Phgdh phosphoglycerate dehydrogenase IEA KEGG rno:00260 NCBI chr 2:188,595,700...188,624,789
Ensembl chr 2:188,595,700...188,624,789 		JBrowse link
G Pipox pipecolic acid and sarcosine oxidase IEA KEGG rno:00260 NCBI chr10:63,267,946...63,281,556
Ensembl chr10:63,267,972...63,282,273 		JBrowse link
G Psat1 phosphoserine aminotransferase 1 IEA KEGG rno:00260 NCBI chr 1:222,623,553...222,646,187
Ensembl chr 1:222,623,556...222,655,693 		JBrowse link
G Psph phosphoserine phosphatase IEA KEGG rno:00260 NCBI chr12:32,527,091...32,541,182
Ensembl chr12:32,519,269...32,541,180 		JBrowse link
G Sardh sarcosine dehydrogenase IEA KEGG rno:00260 NCBI chr 3:30,908,621...30,973,409
Ensembl chr 3:30,908,621...30,972,137 		JBrowse link
G Sds serine dehydratase IEA KEGG rno:00260 NCBI chr12:41,743,796...41,751,108
Ensembl chr12:41,743,799...41,748,773 		JBrowse link
G Shmt1 serine hydroxymethyltransferase 1 TAS
IDA
IEA 		KEGG
RGD		 PMID:15671219 PMID:3110140 rno:00260, RGD:1359815, RGD:2300383 NCBI chr10:45,968,959...45,990,341
Ensembl chr10:45,960,434...45,997,326 		JBrowse link
G Shmt2 serine hydroxymethyltransferase 2 TAS
IDA
IEA 		KEGG
RGD		 PMID:15671219 PMID:3110140 rno:00260, RGD:1359815, RGD:2300383 NCBI chr 7:65,244,247...65,249,580
Ensembl chr 7:65,244,247...65,249,567 		JBrowse link
G Srr serine racemase IEA KEGG rno:00260 NCBI chr10:60,267,936...60,285,094
Ensembl chr10:60,268,859...60,285,100 		JBrowse link
G Tdh L-threonine dehydrogenase IEA KEGG rno:00260 NCBI chr15:41,915,766...41,929,307
Ensembl chr15:41,915,766...41,929,307 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  pathway 6091
    classic metabolic pathway 1852
      amino acid metabolic pathway 308
        amino acid metabolic pathway (KEGG) 266
          glycine, serine and threonine metabolic pathway 32
paths to the root