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PATHWAY ONTOLOGY - ANNOTATIONS

The Pathway Ontology (PW), is currently being developed at the Rat Genome Database. For more information about this vocabulary, please see Petri et al. The rat genome database pathway portal. Database (Oxford). 2011 Apr 8;2011:bar010. Print 2011 or contact us (http://rgd.mcw.edu/contact/index.shtml).

Term:signaling pathway
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Accession:PW:0000003 term browser browse the term
Definition:The pathways where a signal - hormone, neurotransmitter, growth factor, peptide, any molecule - triggers one or multiple cascades of events. This involves a number of molecules, including receptors, proteins, ligands, messengers, any participating molecule. A signaling pathway may be upstream or downstream of other signaling pathways. Signaling pathways control a very broad spectrum of processes as well as pathways.
Comment:The definition was compiled based on a number of definitions available in various dictionaries.
Synonyms:related_synonym: Signal Transduction
 alt_id: Reactome:R-HSA-162582


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acetylcholine signaling pathway via muscarinic acetylcholine receptor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase (Cartwright blood group) ISO RGD PMID:17786266 RGD:8549506 NCBI chrNW_004955573:79,606...85,799
Ensembl chrNW_004955573:80,298...85,799
JBrowse link
G Chat choline O-acetyltransferase ISO RGD PMID:23677775 RGD:8549504 NCBI chrNW_004955556:650,290...695,135
Ensembl chrNW_004955556:650,279...693,276
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 ISO RGD PMID:23759942 RGD:8549590 NCBI chrNW_004955422:18,173,438...18,192,357
Ensembl chrNW_004955422:18,170,616...18,192,412
JBrowse link
G Grk5 G protein-coupled receptor kinase 5 ISO RGD PMID:19478075 RGD:8549592 NCBI chrNW_004955551:43,918...255,118
Ensembl chrNW_004955551:44,156...254,534
JBrowse link
G Rgs2 regulator of G protein signaling 2 ISO RGD PMID:22685433 RGD:8549594 NCBI chrNW_004955406:30,261,757...30,265,389
Ensembl chrNW_004955406:30,261,757...30,266,005
JBrowse link
G Rgs4 regulator of G protein signaling 4 ISO RGD PMID:22685433 RGD:8549594 NCBI chrNW_004955462:13,340,812...13,347,598
Ensembl chrNW_004955462:13,338,960...13,347,610
JBrowse link
G Rgs6 regulator of G protein signaling 6 ISO RGD PMID:22685433 RGD:8549594 NCBI chrNW_004955523:2,763,143...3,366,851
Ensembl chrNW_004955523:2,762,987...3,335,474
JBrowse link
G Slc18a3 solute carrier family 18 member A3 ISO RGD PMID:23677775 RGD:8549504 NCBI chrNW_004955556:696,779...698,869
Ensembl chrNW_004955556:696,974...698,566
JBrowse link
G Slc5a7 solute carrier family 5 member 7 ISO RGD PMID:23677775 RGD:8549504 NCBI chrNW_004955470:11,673,491...11,694,404
Ensembl chrNW_004955470:11,673,465...11,697,163
JBrowse link
acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphai protein family term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrm2 cholinergic receptor muscarinic 2 ISO RGD PMID:23841840 RGD:8549585 NCBI chrNW_004955494:5,845,581...5,975,614
Ensembl chrNW_004955494:5,847,156...5,848,556
JBrowse link
G Chrm4 cholinergic receptor muscarinic 4 ISO RGD PMID:23841840 RGD:8549585 NCBI chrNW_004955422:1,647,663...1,655,363
Ensembl chrNW_004955422:1,647,663...1,655,363
JBrowse link
G Gnai1 G protein subunit alpha i1 ISO RGD PMID:23759942 RGD:8549590 NCBI chrNW_004955410:5,388,184...5,467,022
Ensembl chrNW_004955410:5,388,184...5,467,022
JBrowse link
G Gnai2 G protein subunit alpha i2 ISO RGD PMID:23759942 RGD:8549590 NCBI chrNW_004955532:2,059,038...2,079,120
Ensembl chrNW_004955532:2,059,038...2,079,957
JBrowse link
acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chrm1 cholinergic receptor muscarinic 1 ISO RGD PMID:23841840 RGD:8549585 NCBI chrNW_004955599:349,744...356,714
Ensembl chrNW_004955599:349,744...356,714
JBrowse link
G Chrm3 cholinergic receptor muscarinic 3 ISO RGD PMID:23841840 RGD:8549585 NCBI chrNW_004955492:958,347...1,429,832
Ensembl chrNW_004955492:958,949...960,721
JBrowse link
G Chrm5 cholinergic receptor muscarinic 5 ISO RGD PMID:23841840 RGD:8549585 NCBI chrNW_004955416:526,718...528,353
Ensembl chrNW_004955416:526,755...528,353
JBrowse link
G Gna11 G protein subunit alpha 11 ISO RGD PMID:23759942 RGD:8549590 NCBI chrNW_004955495:5,286,891...5,302,631
Ensembl chrNW_004955495:5,285,380...5,302,631
JBrowse link
G Gna14 G protein subunit alpha 14 ISO RGD PMID:23759942 RGD:8549590 NCBI chrNW_004955512:1,703,750...1,918,321
Ensembl chrNW_004955512:1,707,503...1,917,513
JBrowse link
G Gnaq G protein subunit alpha q ISO RGD PMID:23759942 RGD:8549590 NCBI chrNW_004955512:1,381,159...1,658,409 JBrowse link
acetylcholine signaling pathway via nicotinic acetylcholine receptor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ache acetylcholinesterase (Cartwright blood group) ISO RGD PMID:17786266 RGD:8549506 NCBI chrNW_004955573:79,606...85,799
Ensembl chrNW_004955573:80,298...85,799
JBrowse link
G Agrn agrin ISO RGD PMID:23032192 RGD:8549508 NCBI chrNW_004955486:9,674,103...9,704,994
Ensembl chrNW_004955486:9,675,214...9,704,991
JBrowse link
G Chat choline O-acetyltransferase ISO RGD PMID:23677775 RGD:8549504 NCBI chrNW_004955556:650,290...695,135
Ensembl chrNW_004955556:650,279...693,276
JBrowse link
G Chrna1 cholinergic receptor nicotinic alpha 1 subunit ISO RGD PMID:19126755, PMID:23032192 RGD:8549508, RGD:8549510 NCBI chrNW_004955449:661,310...683,873
Ensembl chrNW_004955449:661,304...683,873
JBrowse link
G Chrna10 cholinergic receptor nicotinic alpha 10 subunit ISO RGD PMID:19126755 RGD:8549510 NCBI chrNW_004955414:19,487,840...19,495,368
Ensembl chrNW_004955414:19,487,862...19,493,034
JBrowse link
G Chrna2 cholinergic receptor nicotinic alpha 2 subunit ISO RGD PMID:19126755 RGD:8549510 NCBI chrNW_004955403:49,970,398...49,989,095
Ensembl chrNW_004955403:49,970,398...49,989,137
JBrowse link
G Chrna3 cholinergic receptor nicotinic alpha 3 subunit ISO RGD PMID:19126755 RGD:8549510 NCBI chrNW_004955450:979,630...1,011,316
Ensembl chrNW_004955450:977,075...1,011,372
JBrowse link
G Chrna4 cholinergic receptor nicotinic alpha 4 subunit ISO RGD PMID:19126755 RGD:8549510 NCBI chrNW_004955528:825,314...840,994
Ensembl chrNW_004955528:825,308...841,270
JBrowse link
G Chrna5 cholinergic receptor nicotinic alpha 5 subunit ISO RGD PMID:19126755 RGD:8549510 NCBI chrNW_004955450:945,400...974,129
Ensembl chrNW_004955450:946,898...974,457
JBrowse link
G Chrna6 cholinergic receptor nicotinic alpha 6 subunit ISO RGD PMID:19126755 RGD:8549510 NCBI chrNW_004955536:166,212...172,551
Ensembl chrNW_004955536:166,212...172,551
JBrowse link
G Chrna7 cholinergic receptor nicotinic alpha 7 subunit ISO RGD PMID:19126755 RGD:8549510 NCBI chrNW_004955416:30,687,518...30,798,700
Ensembl chrNW_004955416:30,687,478...30,798,700
JBrowse link
G Chrna9 cholinergic receptor nicotinic alpha 9 subunit ISO RGD PMID:19126755 RGD:8549510 NCBI chrNW_004955443:7,148,604...7,157,824
Ensembl chrNW_004955443:7,148,604...7,157,824
JBrowse link
G Chrnb1 cholinergic receptor nicotinic beta 1 subunit ISO RGD PMID:19126755, PMID:23032192 RGD:8549508, RGD:8549510 NCBI chrNW_004955467:9,471,962...9,482,370
Ensembl chrNW_004955467:9,471,962...9,482,370
JBrowse link
G Chrnb2 cholinergic receptor nicotinic beta 2 subunit ISO RGD PMID:19126755 RGD:8549510 NCBI chrNW_004955545:1,065,457...1,077,056
Ensembl chrNW_004955545:1,065,457...1,077,526
JBrowse link
G Chrnb3 cholinergic receptor nicotinic beta 3 subunit ISO RGD PMID:19126755 RGD:8549510 NCBI chrNW_004955536:189,881...229,835
Ensembl chrNW_004955536:190,949...232,424
JBrowse link
G Chrnb4 cholinergic receptor nicotinic beta 4 subunit ISO RGD PMID:19126755 RGD:8549510 NCBI chrNW_004955450:1,013,897...1,030,232
Ensembl chrNW_004955450:1,013,607...1,030,282
JBrowse link
G Chrnd cholinergic receptor nicotinic delta subunit ISO RGD PMID:19126755, PMID:23032192 RGD:8549508, RGD:8549510 NCBI chrNW_004955453:3,433,915...3,440,534
Ensembl chrNW_004955453:3,433,341...3,440,269
JBrowse link
G Chrne cholinergic receptor nicotinic epsilon subunit ISO RGD PMID:19126755, PMID:23032192 RGD:8549508, RGD:8549510 NCBI chrNW_004955467:10,312,620...10,318,700
Ensembl chrNW_004955467:10,312,620...10,318,638
JBrowse link
G Chrng cholinergic receptor nicotinic gamma subunit ISO RGD PMID:19126755, PMID:23032192 RGD:8549508, RGD:8549510 NCBI chrNW_004955453:3,425,603...3,432,695
Ensembl chrNW_004955453:3,425,603...3,432,695
JBrowse link
G Dok7 docking protein 7 ISO RGD PMID:23032192 RGD:8549508 NCBI chrNW_004955514:2,166,263...2,190,211
Ensembl chrNW_004955514:2,166,079...2,190,128
JBrowse link
G Lrp4 LDL receptor related protein 4 ISO RGD PMID:23032192 RGD:8549508 NCBI chrNW_004955422:1,191,338...1,238,227
Ensembl chrNW_004955422:1,191,338...1,238,227
JBrowse link
G Musk muscle associated receptor tyrosine kinase ISO RGD PMID:23032192 RGD:8549508 NCBI chrNW_004955419:16,387,770...16,484,266
Ensembl chrNW_004955419:16,387,770...16,484,266
JBrowse link
G Rapsn receptor associated protein of the synapse ISO RGD PMID:23032192 RGD:8549508 NCBI chrNW_004955422:826,556...834,483
Ensembl chrNW_004955422:826,727...834,289
JBrowse link
G Slc18a3 solute carrier family 18 member A3 ISO RGD PMID:23677775 RGD:8549504 NCBI chrNW_004955556:696,779...698,869
Ensembl chrNW_004955556:696,974...698,566
JBrowse link
G Slc5a7 solute carrier family 5 member 7 ISO RGD PMID:23677775 RGD:8549504 NCBI chrNW_004955470:11,673,491...11,694,404
Ensembl chrNW_004955470:11,673,465...11,697,163
JBrowse link
activin signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr1 activin A receptor type 1 ISO PID
RGD
PMID:12770730 PID:200029, RGD:1559169 NCBI chrNW_004955449:15,587,958...15,706,432
Ensembl chrNW_004955449:15,640,230...15,708,694
JBrowse link
G Acvr1b activin A receptor type 1B ISO RGD PMID:12770730 RGD:1559169 NCBI chrNW_004955547:2,311,573...2,366,106
Ensembl chrNW_004955547:2,323,771...2,367,263
JBrowse link
G Acvr2a activin A receptor type 2A ISO RGD PMID:12770730 RGD:1559169 NCBI chrNW_004955440:13,849,926...13,931,374
Ensembl chrNW_004955440:13,849,926...13,931,374
JBrowse link
G Acvr2b activin A receptor type 2B ISO RGD PMID:12770730 RGD:1559169 NCBI chrNW_004955427:25,438,652...25,467,360
Ensembl chrNW_004955427:25,438,652...25,467,360
JBrowse link
G Acvrl1 activin A receptor like type 1 ISO PID
RGD
PMID:12770730 PID:200029, RGD:1559169 NCBI chrNW_004955547:2,278,548...2,293,865
Ensembl chrNW_004955547:2,279,042...2,294,443
JBrowse link
G Fkbp1a FKBP prolyl isomerase 1A ISO PID PID:200029 NCBI chrNW_004955596:580,106...606,210 JBrowse link
G Smad2 SMAD family member 2 ISO RGD PMID:12770730 RGD:1559169 NCBI chrNW_004955402:33,131,760...33,217,144
Ensembl chrNW_004955402:33,136,778...33,216,844
JBrowse link
G Smad3 SMAD family member 3 ISO RGD PMID:12770730 RGD:1559169 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136
JBrowse link
adenosine monophosphate-activated protein kinase (AMPK) signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cab39 calcium binding protein 39 ISO RGD PMID:14511394, PMID:15509864 RGD:1600678, RGD:1600691 NCBI chrNW_004955453:4,582,530...4,670,978
Ensembl chrNW_004955453:4,582,530...4,671,157
JBrowse link
G Calm1 calmodulin 1 ISO RGD PMID:16054095 RGD:2311420 NCBI chrNW_004955438:12,842,437...12,854,028
Ensembl chrNW_004955438:12,842,437...12,854,028
JBrowse link
G Calm2 calmodulin 2 ISO RGD PMID:16054095 RGD:2311420 NCBI chrNW_004955441:13,973,147...13,988,665 JBrowse link
G Calm3 calmodulin 3 ISO RGD PMID:16054095 RGD:2311420 NCBI chrNW_004955574:672,441...680,924
Ensembl chrNW_004955574:672,300...680,924
JBrowse link
G Camkk1 calcium/calmodulin dependent protein kinase kinase 1 ISO RGD PMID:16054095 RGD:2311420 NCBI chrNW_004955467:12,973,667...13,002,098
Ensembl chrNW_004955467:12,976,000...13,002,159
JBrowse link
G Camkk2 calcium/calmodulin dependent protein kinase kinase 2 ISO RGD PMID:16054095 RGD:2311420 NCBI chrNW_004955482:7,000,010...7,029,623
Ensembl chrNW_004955482:7,000,010...7,029,623
JBrowse link
G Cpt1a carnitine palmitoyltransferase 1A ISO RGD PMID:30868489 RGD:25823184 NCBI chrNW_004955422:17,105,887...17,159,696
Ensembl chrNW_004955422:17,109,256...17,159,838
JBrowse link
G Ppm1e protein phosphatase, Mg2+/Mn2+ dependent 1E ISO RGD PMID:20801214 RGD:7794756 NCBI chrNW_004955451:3,989,575...4,137,400
Ensembl chrNW_004955451:3,986,715...4,137,134
JBrowse link
G Ppm1f protein phosphatase, Mg2+/Mn2+ dependent 1F ISO RGD PMID:20801214 RGD:7794756 NCBI chrNW_004955442:17,233,258...17,256,009
Ensembl chrNW_004955442:17,227,723...17,252,383
JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO RGD PMID:21782450 RGD:7794757 NCBI chrNW_004955422:18,076,670...18,079,859
Ensembl chrNW_004955422:18,076,670...18,079,859
JBrowse link
G Ppp1cb protein phosphatase 1 catalytic subunit beta ISO RGD PMID:21782450 RGD:7794757 NCBI chrNW_004955469:10,657,029...10,682,398
Ensembl chrNW_004955469:10,662,032...10,682,398
JBrowse link
G Ppp1r3d protein phosphatase 1 regulatory subunit 3D ISO RGD PMID:21782450 RGD:7794757 NCBI chrNW_004955528:3,804,557...3,807,309 JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha ISO RGD PMID:21782450 RGD:7794757 NCBI chrNW_004955408:5,435,117...5,460,361
Ensembl chrNW_004955408:5,433,268...5,460,361
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO RGD PMID:12829246, PMID:14511394, PMID:15509864 RGD:1600678, RGD:1600679, RGD:1600691 NCBI chrNW_004955426:25,079,718...25,102,090
Ensembl chrNW_004955426:25,079,718...25,102,090
JBrowse link
G Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 ISO RGD PMID:12829246, PMID:14511394, PMID:15509864 RGD:1600678, RGD:1600679, RGD:1600691 NCBI chrNW_004955464:2,996,608...3,062,197
Ensembl chrNW_004955464:3,003,837...3,062,197
JBrowse link
G Prkab1 protein kinase AMP-activated non-catalytic subunit beta 1 ISO RGD PMID:12829246, PMID:15509864 RGD:1600678, RGD:1600679 NCBI chrNW_004955455:11,877,407...11,889,987
Ensembl chrNW_004955455:11,876,661...11,890,069
JBrowse link
G Prkab2 protein kinase AMP-activated non-catalytic subunit beta 2 ISO RGD PMID:12829246, PMID:15509864 RGD:1600678, RGD:1600679 NCBI chrNW_004955568:1,253,331...1,279,761
Ensembl chrNW_004955568:1,252,736...1,279,761
JBrowse link
G Prkag1 protein kinase AMP-activated non-catalytic subunit gamma 1 ISO RGD PMID:12829246, PMID:14511394, PMID:15509864 RGD:1600678, RGD:1600679, RGD:1600691 NCBI chrNW_004955500:7,834,550...7,850,412
Ensembl chrNW_004955500:7,834,550...7,850,379
JBrowse link
G Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 ISO RGD PMID:12829246, PMID:15509864 RGD:1600678, RGD:1600679 NCBI chrNW_004955491:5,852,534...6,048,820
Ensembl chrNW_004955491:5,852,082...6,019,318
JBrowse link
G Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 ISO RGD PMID:12829246, PMID:15509864 RGD:1600678, RGD:1600679 NCBI chrNW_004955453:14,584,405...14,594,112
Ensembl chrNW_004955453:14,584,412...14,595,369
JBrowse link
G Stk11 serine/threonine kinase 11 ISO RGD PMID:14511394, PMID:15509864 RGD:1600678, RGD:1600691 NCBI chrNW_004955495:6,678,195...6,699,408
Ensembl chrNW_004955495:6,678,195...6,699,058
JBrowse link
G Strada STE20 related adaptor alpha ISO RGD PMID:14511394, PMID:15509864 RGD:1600678, RGD:1600691 NCBI chrNW_004955478:8,082,075...8,116,320
Ensembl chrNW_004955478:8,082,075...8,116,543
JBrowse link
G Tsc1 TSC complex subunit 1 ISO RGD PMID:31787541 RGD:25823196 NCBI chrNW_004955513:2,197,037...2,244,992
Ensembl chrNW_004955513:2,197,037...2,244,992
JBrowse link
adenosine signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adcy2 adenylate cyclase 2 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955504:4,990,634...5,376,990
Ensembl chrNW_004955504:5,004,903...5,376,328
JBrowse link
G Adora2a adenosine A2a receptor ISO SMPDB SMP:00320 NCBI chrNW_004955455:7,886,720...7,906,214
Ensembl chrNW_004955455:7,895,974...7,906,505
JBrowse link
G Adora2b adenosine A2b receptor ISO SMPDB SMP:00321 NCBI chrNW_004955467:1,342,271...1,363,149
Ensembl chrNW_004955467:1,342,271...1,363,138
JBrowse link
G Akt1 AKT serine/threonine kinase 1 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904
JBrowse link
G Arhgef7 Rho guanine nucleotide exchange factor 7 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955404:1,749,051...1,835,455
Ensembl chrNW_004955404:1,748,665...1,814,575
JBrowse link
G Atf2 activating transcription factor 2 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955449:332,563...411,218
Ensembl chrNW_004955449:338,193...411,218
JBrowse link
G Bad BCL2 associated agonist of cell death ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955422:20,795,585...20,809,039
Ensembl chrNW_004955422:20,795,676...20,809,245
JBrowse link
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955494:2,567,238...2,712,708 JBrowse link
G Cdc42 cell division cycle 42 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955452:2,255,940...2,299,042
Ensembl chrNW_004955452:2,255,117...2,299,042
JBrowse link
G Chuk component of inhibitor of nuclear factor kappa B kinase complex ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955507:6,066,026...6,102,066
Ensembl chrNW_004955507:6,067,203...6,102,001
JBrowse link
G Creb1 cAMP responsive element binding protein 1 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955457:7,424,403...7,490,630
Ensembl chrNW_004955457:7,431,736...7,491,149
JBrowse link
G Elk1 ETS transcription factor ELK1 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955516:431,081...444,871
Ensembl chrNW_004955516:430,775...444,871
JBrowse link
G Gnb1 G protein subunit beta 1 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955486:9,165,850...9,192,306
Ensembl chrNW_004955486:9,165,850...9,193,066
JBrowse link
G Gng12 G protein subunit gamma 12 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955423:23,576,515...23,644,600
Ensembl chrNW_004955423:23,634,402...23,644,600
JBrowse link
G Hras HRas proto-oncogene, GTPase ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955476:11,508,446...11,510,333
Ensembl chrNW_004955476:11,508,126...11,510,333
JBrowse link
G Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955536:611,965...658,647
Ensembl chrNW_004955536:612,774...658,647
JBrowse link
G Jun Jun proto-oncogene, AP-1 transcription factor subunit ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955464:1,107,598...1,110,326 JBrowse link
G Map2k2 mitogen-activated protein kinase kinase 2 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955495:4,695,239...4,718,380 JBrowse link
G Map2k6 mitogen-activated protein kinase kinase 6 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955478:3,331,607...3,448,840
Ensembl chrNW_004955478:3,331,607...3,448,842
JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955563:1,352,638...1,361,598
Ensembl chrNW_004955563:1,352,638...1,361,598
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955446:11,022,091...11,090,136
Ensembl chrNW_004955446:11,021,971...11,090,136
JBrowse link
G Map3k4 mitogen-activated protein kinase kinase kinase 4 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955439:20,144,059...20,263,885
Ensembl chrNW_004955439:20,144,059...20,263,879
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955442:17,284,232...17,380,026
Ensembl chrNW_004955442:17,284,232...17,380,020
JBrowse link
G Mapk11 mitogen-activated protein kinase 11 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955413:33,287,860...33,293,948
Ensembl chrNW_004955413:33,286,390...33,294,227
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955556:1,593,552...1,705,543
Ensembl chrNW_004955556:1,593,494...1,665,784
JBrowse link
G Nfkb1 nuclear factor kappa B subunit 1 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955496:5,842,734...5,950,995
Ensembl chrNW_004955496:5,842,600...5,927,885
JBrowse link
G Nfkb2 nuclear factor kappa B subunit 2 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955485:7,994,730...8,001,776
Ensembl chrNW_004955485:7,994,874...8,000,444
JBrowse link
G Nfkbia NFKB inhibitor alpha ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955409:25,691,673...25,695,151
Ensembl chrNW_004955409:25,691,534...25,697,520
JBrowse link
G Pak1 p21 (RAC1) activated kinase 1 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955414:14,365,325...14,447,470
Ensembl chrNW_004955414:14,365,157...14,450,611
JBrowse link
G Pard6a par-6 family cell polarity regulator alpha ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955484:9,019,929...9,022,561
Ensembl chrNW_004955484:9,019,929...9,021,995
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955442:14,685,089...14,772,870
Ensembl chrNW_004955442:14,685,153...14,772,870
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955420:8,355,415...8,427,024
Ensembl chrNW_004955420:8,356,353...8,427,024
JBrowse link
G Prkacb protein kinase cAMP-activated catalytic subunit beta ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955423:9,630,308...9,747,820
Ensembl chrNW_004955423:9,629,378...9,747,820
JBrowse link
G Prkcz protein kinase C zeta ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955486:8,947,579...9,021,702
Ensembl chrNW_004955486:8,947,579...9,021,702
JBrowse link
G Rap1a RAP1A, member of RAS oncogene family ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955435:15,090,521...15,171,397
Ensembl chrNW_004955435:15,150,827...15,171,397
JBrowse link
G Rapgef2 Rap guanine nucleotide exchange factor 2 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955471:12,670,837...12,838,910
Ensembl chrNW_004955471:12,670,764...12,815,430
JBrowse link
G Rapgef3 Rap guanine nucleotide exchange factor 3 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955500:6,655,056...6,674,311
Ensembl chrNW_004955500:6,655,056...6,674,311
JBrowse link
G Rps6ka1 ribosomal protein S6 kinase A1 ISO SMPDB SMP:00320, SMP:00321 NCBI chrNW_004955452:5,905,561...5,938,096
Ensembl chrNW_004955452:5,904,762...5,939,091
JBrowse link
adiponectin signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipoq adiponectin, C1Q and collagen domain containing ISO RGD PMID:16823476 RGD:1642395 NCBI chrNW_004955420:20,911,181...20,922,992
Ensembl chrNW_004955420:20,912,348...20,914,402
JBrowse link
G Adipor1 adiponectin receptor 1 ISO RGD PMID:16823476 RGD:1642395 NCBI chrNW_004955406:38,939,167...38,955,647
Ensembl chrNW_004955406:38,936,588...38,955,352
JBrowse link
G Adipor2 adiponectin receptor 2 ISO RGD PMID:16823476, PMID:18755807, PMID:24797033, PMID:27220557 RGD:1642395, RGD:25824939, RGD:25824940, RGD:25824943 NCBI chrNW_004955454:4,243,898...4,327,255
Ensembl chrNW_004955454:4,243,898...4,327,308
JBrowse link
aldosterone signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Casp8ap2 caspase 8 associated protein 2 ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955411:16,535,646...16,568,139 JBrowse link
G Crebbp CREB binding protein ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955442:13,559,496...13,691,913
Ensembl chrNW_004955442:13,559,496...13,692,004
JBrowse link
G Daxx death domain associated protein ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955437:1,869,692...1,874,041
Ensembl chrNW_004955437:1,869,572...1,873,050
JBrowse link
G Dhx9 DExH-box helicase 9 ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955406:21,697,813...21,743,551
Ensembl chrNW_004955406:21,697,813...21,745,011
JBrowse link
G Ell elongation factor for RNA polymerase II ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955524:3,054,296...3,094,125
Ensembl chrNW_004955524:3,054,292...3,092,973
JBrowse link
G Faf1 Fas associated factor 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955464:8,037,344...8,477,798
Ensembl chrNW_004955464:8,036,955...8,479,249
JBrowse link
G Fkbp4 FKBP prolyl isomerase 4 ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955429:18,334,939...18,344,530
Ensembl chrNW_004955429:18,334,939...18,344,530
JBrowse link
G Fkbp5 FKBP prolyl isomerase 5 ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955437:3,445,515...3,548,874
Ensembl chrNW_004955437:3,447,075...3,548,564
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955538:1,469,544...1,475,010 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459
JBrowse link
G Jak2 Janus kinase 2 ISO RGD PMID:15932931 RGD:1641841 NCBI chrNW_004955434:9,227,897...9,341,208
Ensembl chrNW_004955434:9,227,595...9,341,208
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955469:6,676,780...6,892,587
Ensembl chrNW_004955469:6,794,821...6,892,566
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955444:9,313,748...9,587,109
Ensembl chrNW_004955444:9,313,447...9,584,913
JBrowse link
G Ncor1 nuclear receptor corepressor 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955467:1,408,292...1,568,539
Ensembl chrNW_004955467:1,409,281...1,546,842
JBrowse link
G Ncor2 nuclear receptor corepressor 2 ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955482:4,927,482...5,031,848
Ensembl chrNW_004955482:4,942,221...5,031,904
JBrowse link
G Nfyc nuclear transcription factor Y subunit gamma ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955537:544,534...611,459
Ensembl chrNW_004955537:559,261...613,369
JBrowse link
G Nr3c2 nuclear receptor subfamily 3 group C member 2 ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955471:3,059,210...3,397,894
Ensembl chrNW_004955471:3,061,735...3,395,520
JBrowse link
G Pias1 protein inhibitor of activated STAT 1 ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955450:7,896,741...7,991,045
Ensembl chrNW_004955450:7,896,741...7,991,027
JBrowse link
G Ppargc1a PPARG coactivator 1 alpha ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955480:543,397...1,188,376
Ensembl chrNW_004955480:1,078,322...1,188,435
JBrowse link
G Ptges3 prostaglandin E synthase 3 ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955458:4,203,075...4,209,967
Ensembl chrNW_004955458:4,203,076...4,209,910
JBrowse link
G Ube2i ubiquitin conjugating enzyme E2 I ISO RGD PMID:21784126 RGD:7421504 NCBI chrNW_004955442:15,902,026...15,913,033
Ensembl chrNW_004955442:15,901,980...15,913,037
JBrowse link
altered androgen signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO RGD PMID:18008377, PMID:23759327 RGD:2326139, RGD:8693397 NCBI chrNW_004955475:7,013,960...7,192,473
Ensembl chrNW_004955475:7,013,960...7,186,069
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO RGD PMID:23759327 RGD:8693397 NCBI chrNW_004955444:9,313,748...9,587,109
Ensembl chrNW_004955444:9,313,447...9,584,913
JBrowse link
G Ncor2 nuclear receptor corepressor 2 ISO RGD PMID:23759327 RGD:8693397 NCBI chrNW_004955482:4,927,482...5,031,848
Ensembl chrNW_004955482:4,942,221...5,031,904
JBrowse link
altered clathrin-dependent synaptic vesicle endocytosis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 ISO RGD PMID:25302295 RGD:10450553 NCBI chrNW_004955423:25,269,459...25,382,664
Ensembl chrNW_004955423:25,269,466...25,377,641
JBrowse link
G Synj1 synaptojanin 1 ISO RGD PMID:25302295 RGD:10450553 NCBI chrNW_004955407:32,094,076...32,175,676
Ensembl chrNW_004955407:32,093,479...32,175,795
JBrowse link
altered epidermal growth factor/neuregulin signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egf epidermal growth factor ISO RGD PMID:19506583 RGD:5490965 NCBI chrNW_004955496:325,954...401,430
Ensembl chrNW_004955496:328,075...401,569
JBrowse link
G Egfr epidermal growth factor receptor ISO RGD PMID:19506583, PMID:20519133, PMID:20951313 RGD:5133241, RGD:5133242, RGD:5490965 NCBI chrNW_004955456:321,222...456,431 JBrowse link
G Erbb2 erb-b2 receptor tyrosine kinase 2 ISO RGD PMID:19078924, PMID:21277552 RGD:4143515, RGD:5133243 NCBI chrNW_004955451:14,442,816...14,456,009
Ensembl chrNW_004955451:14,442,816...14,459,379
JBrowse link
G Tgfa transforming growth factor alpha ISO RGD PMID:19506583 RGD:5490965 NCBI chrNW_004955424:14,616,390...14,709,723
Ensembl chrNW_004955424:14,616,259...14,710,183
JBrowse link
altered Erk5 MAPK signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Map2k5 mitogen-activated protein kinase kinase 5 ISO RGD PMID:16376520 RGD:2298532 NCBI chrNW_004955450:8,207,577...8,458,258
Ensembl chrNW_004955450:8,203,569...8,458,258
JBrowse link
G Mapk7 mitogen-activated protein kinase 7 ISO RGD PMID:16376520 RGD:2298532 NCBI chrNW_004955467:381,801...387,078
Ensembl chrNW_004955467:378,156...386,532
JBrowse link
altered extracellular signal-regulated Raf/Mek/Erk signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Braf B-Raf proto-oncogene, serine/threonine kinase ISO RGD PMID:17126425, PMID:18098337, PMID:20951313, PMID:21277552 RGD:2293882, RGD:2298531, RGD:5133242, RGD:5133243 NCBI chrNW_004955494:2,567,238...2,712,708 JBrowse link
G Kras KRAS proto-oncogene, GTPase ISO RGD PMID:16112461, PMID:18772397, PMID:19078924, PMID:19506583, PMID:20951313 RGD:2306732, RGD:4143515, RGD:5133242, RGD:5490965, RGD:5490966 NCBI chrNW_004955413:20,298,852...20,328,756
Ensembl chrNW_004955413:20,298,824...20,328,758
JBrowse link
G Map2k1 mitogen-activated protein kinase kinase 1 ISO RGD PMID:20951313, PMID:21277552 RGD:5133242, RGD:5133243 NCBI chrNW_004955450:9,181,851...9,205,277
Ensembl chrNW_004955450:9,181,851...9,239,648
JBrowse link
G Raf1 Raf-1 proto-oncogene, serine/threonine kinase ISO RGD PMID:17126425 RGD:2293882 NCBI chrNW_004955429:17,980,956...18,049,723
Ensembl chrNW_004955429:18,025,932...18,049,723
JBrowse link
altered Hedgehog signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Boc BOC cell adhesion associated, oncogene regulated ISO RGD PMID:18772397 RGD:5490966 NCBI chrNW_004955427:13,424,478...13,492,527
Ensembl chrNW_004955427:13,424,478...13,493,952
JBrowse link
G Gli1 GLI family zinc finger 1 ISO RGD PMID:18772397, PMID:21186299 RGD:5490966, RGD:5491005 NCBI chrNW_004955458:5,181,761...5,193,500
Ensembl chrNW_004955458:5,185,225...5,193,196
JBrowse link
G Gli3 GLI family zinc finger 3 ISO RGD PMID:18772397 RGD:5490966 NCBI chrNW_004955460:1,528,457...1,805,584
Ensembl chrNW_004955460:1,528,412...1,805,918
JBrowse link
G Lrp2 LDL receptor related protein 2 ISO RGD PMID:18772397 RGD:5490966 NCBI chrNW_004955449:5,155,109...5,314,886
Ensembl chrNW_004955449:5,160,946...5,314,948
JBrowse link
G Shh sonic hedgehog signaling molecule ISO RGD PMID:19506583 RGD:5490965 NCBI chrNW_004955491:8,647,133...8,657,381 JBrowse link
altered hypoxia inducible factor pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Vhl von Hippel-Lindau tumor suppressor ISO RGD PMID:22035299 RGD:6907133 NCBI chrNW_004955561:1,573,525...1,578,295 JBrowse link
altered insulin signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ins insulin ISO RGD PMID:9809695 RGD:2313694 NCBI chrNW_004955422:13,909,408...13,910,419
Ensembl chrNW_004955422:13,909,407...13,910,419
JBrowse link
G Insr insulin receptor ISO RGD PMID:9809695 RGD:2313694 NCBI chrNW_004955563:1,867,400...2,011,845
Ensembl chrNW_004955563:1,867,400...2,009,149
JBrowse link
altered insulin-like growth factor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Igf1 insulin like growth factor 1 ISO RGD PMID:15996002 RGD:1580474 NCBI chrNW_004955405:37,505,830...37,582,152
Ensembl chrNW_004955405:37,512,201...37,582,152
JBrowse link
altered integrin mediated signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ilk integrin linked kinase ISO RGD PMID:18772397 RGD:5490966 NCBI chrNW_004955414:22,316,243...22,322,979
Ensembl chrNW_004955414:22,316,047...22,322,979
JBrowse link
G Itga1 integrin subunit alpha 1 ISO RGD PMID:10536667 RGD:1302875 NCBI chrNW_004955446:14,439,571...14,582,236
Ensembl chrNW_004955446:14,446,300...14,577,605
JBrowse link
G Itga11 integrin subunit alpha 11 ISO RGD PMID:18772397 RGD:5490966 NCBI chrNW_004955450:7,730,936...7,823,342
Ensembl chrNW_004955450:7,730,815...7,824,787
JBrowse link
G Itga4 integrin subunit alpha 4 ISO RGD PMID:11782963, PMID:18772397 RGD:1302879, RGD:5490966 NCBI chrNW_004955403:15,726,296...15,807,055
Ensembl chrNW_004955403:15,723,785...15,807,111
JBrowse link
G Itga8 integrin subunit alpha 8 ISO RGD PMID:10504498 RGD:633055 NCBI chrNW_004955429:11,932,764...12,120,757
Ensembl chrNW_004955429:11,932,570...12,120,821
JBrowse link
G Itga9 integrin subunit alpha 9 ISO RGD PMID:18772397 RGD:5490966 NCBI chrNW_004955421:4,331,053...4,663,101
Ensembl chrNW_004955421:4,331,048...4,663,092
JBrowse link
altered Jak-Stat signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Jak2 Janus kinase 2 ISO RGD PMID:12032773 RGD:1357939 NCBI chrNW_004955434:9,227,897...9,341,208
Ensembl chrNW_004955434:9,227,595...9,341,208
JBrowse link
G Jak3 Janus kinase 3 ISO RGD PMID:12032773 RGD:1357939 NCBI chrNW_004955524:3,399,895...3,412,018
Ensembl chrNW_004955524:3,401,642...3,411,643
JBrowse link
altered leptin system pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insr insulin receptor ISO increased basal hypothalamic leptin signaling without changes in leptin receptor expression after antisense-mediated hypothalamus-specific Insr knock-down RGD PMID:17585961 RGD:2290473 NCBI chrNW_004955563:1,867,400...2,011,845
Ensembl chrNW_004955563:1,867,400...2,009,149
JBrowse link
G Lep leptin ISO RGD PMID:11102451, PMID:15703762 RGD:1357910, RGD:61790 NCBI chrNW_004955479:9,266,604...9,276,568
Ensembl chrNW_004955479:9,274,516...9,279,472
JBrowse link
G Lepr leptin receptor ISO RGD PMID:11102451, PMID:15703762, PMID:17229951 RGD:1357910, RGD:1600611, RGD:61790 NCBI chrNW_004955423:25,108,897...25,185,315
Ensembl chrNW_004955423:25,111,266...25,185,407
JBrowse link
altered melanocortin system pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrp agouti related neuropeptide ISO RGD PMID:15189116 RGD:1357925 NCBI chrNW_004955484:9,165,120...9,166,789
Ensembl chrNW_004955484:9,165,120...9,166,789
JBrowse link
G Mc4r melanocortin 4 receptor ISO RGD PMID:15189116 RGD:1357925 NCBI chrNW_004955402:44,453,973...44,456,689
Ensembl chrNW_004955402:44,455,294...44,456,292
JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 ISO RGD PMID:11874690, PMID:15189116 RGD:1357925, RGD:1357926 NCBI chrNW_004955418:16,181,809...16,224,274
Ensembl chrNW_004955418:16,181,771...16,224,603
JBrowse link
G Pomc proopiomelanocortin ISO RGD PMID:11874690, PMID:15189116 RGD:1357925, RGD:1357926 NCBI chrNW_004955469:7,217,233...7,220,401
Ensembl chrNW_004955469:7,217,363...7,220,386
JBrowse link
G Sdc1 syndecan 1 ISO RGD PMID:15189116 RGD:1357925 NCBI chrNW_004955469:2,762,696...2,773,697 JBrowse link
altered Notch signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey1 hes related family bHLH transcription factor with YRPW motif 1 ISO RGD PMID:12548545 RGD:1334460 NCBI chrNW_004955444:1,498,444...1,502,099
Ensembl chrNW_004955444:1,498,675...1,500,945
JBrowse link
G Numb NUMB endocytic adaptor protein ISO RGD PMID:15492044 RGD:1334451 NCBI chrNW_004955523:2,025,652...2,076,037 JBrowse link
altered Notch signaling pathway involving promoters term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hey1 hes related family bHLH transcription factor with YRPW motif 1 ISO RGD PMID:12548545 RGD:1334460 NCBI chrNW_004955444:1,498,444...1,502,099
Ensembl chrNW_004955444:1,498,675...1,500,945
JBrowse link
altered Notch signaling pathway involving the macromolecules modifying the main players term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Numb NUMB endocytic adaptor protein ISO RGD PMID:15492044 RGD:1334451 NCBI chrNW_004955523:2,025,652...2,076,037 JBrowse link
G Psen2 presenilin 2 ISO C. elegans transgenics expressing wild-type and mutant PSEN2 RGD PMID:16474849 RGD:2302525 NCBI chrNW_004955406:5,727,367...5,748,798
Ensembl chrNW_004955406:5,727,367...5,752,234
JBrowse link
altered Notch signaling pathway involving the main players term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dll3 delta like canonical Notch ligand 3 ISO Mutations in the gene have been associated with Spondylocostal dysostosis RGD PMID:12141422 RGD:1304493 NCBI chrNW_004955468:70,714...78,831
Ensembl chrNW_004955468:71,004...78,827
JBrowse link
G Jag1 jagged canonical Notch ligand 1 ISO RGD PMID:15057910 RGD:1334443 NCBI chrNW_004955415:20,490,414...20,526,068
Ensembl chrNW_004955415:20,490,414...20,527,917
JBrowse link
G Notch1 notch receptor 1 ISO Mutations in the dimerization and/or PEST domain have been associated with human acute T-lymphoblastic leukemias RGD PMID:15472075 RGD:1334450 NCBI chrNW_004955513:4,225,939...4,264,875
Ensembl chrNW_004955513:4,225,956...4,263,259
JBrowse link
G Notch3 notch receptor 3 ISO Mutations are predominantly found in the EGF repeats and clustered within the first five RGD PMID:9388399 RGD:1334441 NCBI chrNW_004955495:8,012,370...8,048,616
Ensembl chrNW_004955495:8,012,502...8,047,710
JBrowse link
altered p53 signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ets1 ETS proto-oncogene 1, transcription factor ISO RGD PMID:22713868 RGD:8663430 NCBI chrNW_004955412:29,433,730...29,602,389
Ensembl chrNW_004955412:29,432,482...29,545,580
JBrowse link
G Mdm2 MDM2 proto-oncogene ISO RGD PMID:19165225, PMID:23262034 RGD:2316186, RGD:8663434 NCBI chrNW_004955458:15,264,028...15,287,290
Ensembl chrNW_004955458:15,263,739...15,286,808
JBrowse link
G Mdm4 MDM4 regulator of p53 ISO RGD PMID:23262034 RGD:8663434 NCBI chrNW_004955406:40,346,617...40,387,977
Ensembl chrNW_004955406:40,346,588...40,387,977
JBrowse link
G Nfya nuclear transcription factor Y subunit alpha ISO RGD PMID:22713868, PMID:23263379 RGD:8663430, RGD:8663431 NCBI chrNW_004955437:7,745,182...7,770,348
Ensembl chrNW_004955437:7,744,633...7,771,035
JBrowse link
G Nfyb nuclear transcription factor Y subunit beta ISO RGD PMID:22713868, PMID:23263379 RGD:8663430, RGD:8663431 NCBI chrNW_004955405:38,773,690...38,789,534
Ensembl chrNW_004955405:38,771,837...38,789,536
JBrowse link
G Nfyc nuclear transcription factor Y subunit gamma ISO RGD PMID:22713868, PMID:23263379 RGD:8663430, RGD:8663431 NCBI chrNW_004955537:544,534...611,459
Ensembl chrNW_004955537:559,261...613,369
JBrowse link
G Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ISO RGD PMID:22713868 RGD:8663430 NCBI chrNW_004955495:1,250,557...1,261,617
Ensembl chrNW_004955495:1,250,453...1,266,235
JBrowse link
G Srebf2 sterol regulatory element binding transcription factor 2 ISO RGD PMID:22713868, PMID:23263379 RGD:8663430, RGD:8663431 NCBI chrNW_004955413:27,271,717...27,326,655
Ensembl chrNW_004955413:27,271,953...27,326,759
JBrowse link
G Tp53 tumor protein p53 ISO RGD PMID:18772397, PMID:19078924, PMID:19165225, PMID:20951313, PMID:22713868, PMID:23263379, PMID:23759327 RGD:2316186, RGD:4143515, RGD:5133242, RGD:5490966, RGD:8663430, RGD:8663431, RGD:8693397 NCBI chrNW_004955467:9,241,391...9,256,716
Ensembl chrNW_004955467:9,252,130...9,255,928
JBrowse link
G Tp63 tumor protein p63 ISO RGD PMID:22713868, PMID:23263379 RGD:8663430, RGD:8663431 NCBI chrNW_004955420:18,178,639...18,384,786
Ensembl chrNW_004955420:18,176,155...18,384,786
JBrowse link
G Tp73 tumor protein p73 ISO RGD PMID:22713868, PMID:23263379 RGD:8663430, RGD:8663431 NCBI chrNW_004955486:7,914,608...7,961,992
Ensembl chrNW_004955486:7,914,440...7,952,982
JBrowse link
G Vdr vitamin D receptor ISO RGD PMID:22713868 RGD:8663430 NCBI chrNW_004955500:6,745,725...6,798,052
Ensembl chrNW_004955500:6,745,678...6,798,048
JBrowse link
altered phosphatidylinositol 3-kinase signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO RGD PMID:23759327 RGD:8693397 NCBI chrNW_004955420:8,355,415...8,427,024
Ensembl chrNW_004955420:8,356,353...8,427,024
JBrowse link
G Pten phosphatase and tensin homolog ISO RGD PMID:23759327 RGD:8693397 NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829
JBrowse link
altered phosphatidylinositol 3-kinase-Akt signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Akt1 AKT serine/threonine kinase 1 ISO RGD PMID:18955974, PMID:21277552 RGD:2313763, RGD:5133243 NCBI chrNW_004955538:3,208,711...3,224,386
Ensembl chrNW_004955538:3,208,710...3,229,904
JBrowse link
G Akt2 AKT serine/threonine kinase 2 ISO RGD PMID:15166380, PMID:18955974, PMID:19506583 RGD:2313408, RGD:2313763, RGD:5490965 NCBI chrNW_004955578:950,258...1,004,438 JBrowse link
G Akt3 AKT serine/threonine kinase 3 ISO RGD PMID:18955974 RGD:2313763 NCBI chrNW_004955406:6,907,876...7,163,672 JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ISO RGD PMID:18955974, PMID:19078924, PMID:20951313, PMID:21277552 RGD:2313763, RGD:4143515, RGD:5133242, RGD:5133243 NCBI chrNW_004955420:8,355,415...8,427,024
Ensembl chrNW_004955420:8,356,353...8,427,024
JBrowse link
G Pten phosphatase and tensin homolog ISO RGD PMID:18008377, PMID:18955974, PMID:19078924, PMID:19506583, PMID:20951313 RGD:2313763, RGD:2326139, RGD:4143515, RGD:5133242, RGD:5490965 NCBI chrNW_004955425:5,007,811...5,091,829
Ensembl chrNW_004955425:5,014,147...5,091,829
JBrowse link
altered Reelin signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dab1 DAB adaptor protein 1 ISO RGD PMID:12670697, PMID:12764038, PMID:16266828 RGD:1358468, RGD:2324967, RGD:727518 NCBI chrNW_004955464:2,325,529...2,721,497
Ensembl chrNW_004955464:2,455,346...2,724,358
JBrowse link
G Fyn FYN proto-oncogene, Src family tyrosine kinase ISO RGD PMID:12778121 RGD:2324970 NCBI chrNW_004955411:36,403,156...36,597,660
Ensembl chrNW_004955411:36,401,842...36,512,054
JBrowse link
G Itga3 integrin subunit alpha 3 ISO RGD PMID:15583703 RGD:2325851 NCBI chrNW_004955451:11,563,120...11,590,119
Ensembl chrNW_004955451:11,561,704...11,589,727
JBrowse link
G Itgb1 integrin subunit beta 1 ISO RGD PMID:15583703 RGD:2325851 NCBI chrNW_004955462:4,454,809...4,483,227
Ensembl chrNW_004955462:4,454,809...4,484,842
JBrowse link
G Lrp8 LDL receptor related protein 8 ISO RGD PMID:19846452 RGD:2324974 NCBI chrNW_004955464:5,837,002...5,912,178
Ensembl chrNW_004955464:5,837,009...5,911,672
JBrowse link
G Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 ISO RGD PMID:17330141 RGD:4107040 NCBI chrNW_004955481:608,897...686,454
Ensembl chrNW_004955481:608,897...686,452
JBrowse link
G Pafah1b2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 ISO RGD PMID:17330141 RGD:4107040 NCBI chrNW_004955412:18,471,621...18,494,082
Ensembl chrNW_004955412:18,474,199...18,494,082
JBrowse link
G Pafah1b3 platelet activating factor acetylhydrolase 1b catalytic subunit 3 ISO RGD PMID:17330141 RGD:4107040 NCBI chrNW_004955555:609,925...612,701
Ensembl chrNW_004955555:609,925...612,701
JBrowse link
G Reln reelin ISO RGD PMID:12670697, PMID:12764038 RGD:1358468, RGD:727518 NCBI chrNW_004955410:8,424,439...8,863,966
Ensembl chrNW_004955410:8,424,394...8,863,969
JBrowse link
G Src SRC proto-oncogene, non-receptor tyrosine kinase ISO RGD PMID:18237558 RGD:2325284 NCBI chrNW_004955445:19,213,210...19,227,670
Ensembl chrNW_004955445:19,215,161...19,228,695
JBrowse link
G Vldlr very low density lipoprotein receptor ISO RGD PMID:12764038 RGD:1358468 NCBI chrNW_004955434:7,013,092...7,050,103
Ensembl chrNW_004955434:7,013,092...7,050,103
JBrowse link
altered scatter factor/hepatocyte growth factor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Met MET proto-oncogene, receptor tyrosine kinase ISO RGD PMID:19506583, PMID:20519133, PMID:20951313, PMID:21277552 RGD:5133241, RGD:5133242, RGD:5133243, RGD:5490965 NCBI chrNW_004955432:22,440,671...22,519,592
Ensembl chrNW_004955432:22,440,637...22,517,647
JBrowse link
altered transforming growth factor-beta Smad dependent signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Smad2 SMAD family member 2 ISO RGD PMID:17613544, PMID:18662538 RGD:2306282, RGD:2308865 NCBI chrNW_004955402:33,131,760...33,217,144
Ensembl chrNW_004955402:33,136,778...33,216,844
JBrowse link
G Smad3 SMAD family member 3 ISO RGD PMID:17613544, PMID:18772397 RGD:2306282, RGD:5490966 NCBI chrNW_004955450:8,747,651...8,842,003
Ensembl chrNW_004955450:8,747,651...8,842,136
JBrowse link
G Smad4 SMAD family member 4 ISO RGD PMID:17613544, PMID:18662538, PMID:18772397, PMID:19506583 RGD:2306282, RGD:2308865, RGD:5490965, RGD:5490966 NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538
JBrowse link
G Smad7 SMAD family member 7 ISO RGD PMID:18662538 RGD:2308865 NCBI chrNW_004955402:34,028,184...34,058,949
Ensembl chrNW_004955402:34,028,063...34,058,291
JBrowse link
G Tgfb1 transforming growth factor beta 1 ISO RGD PMID:17613544, PMID:18313409 RGD:2299005, RGD:2306282 NCBI chrNW_004955555:274,405...288,441
Ensembl chrNW_004955555:270,652...288,441
JBrowse link
G Tgfbr1 transforming growth factor beta receptor 1 ISO RGD PMID:17613544, PMID:18313409 RGD:2299005, RGD:2306282 NCBI chrNW_004955419:26,490,899...26,546,349
Ensembl chrNW_004955419:26,490,899...26,547,017
JBrowse link
G Tgfbr2 transforming growth factor beta receptor 2 ISO RGD PMID:17613544, PMID:18313409, PMID:18662538, PMID:18772397, PMID:19506583 RGD:2299005, RGD:2306282, RGD:2308865, RGD:5490965, RGD:5490966 NCBI chrNW_004955430:21,919,338...21,999,688
Ensembl chrNW_004955430:21,932,553...22,001,837
JBrowse link
altered vascular endothelial growth factor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flt4 fms related receptor tyrosine kinase 4 ISO RGD PMID:15563310 RGD:1334463 NCBI chrNW_004955408:98,995...137,922
Ensembl chrNW_004955408:107,056...140,056
JBrowse link
altered vascular endothelial growth factor signaling pathway involving proteins affecting its expression term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kdr kinase insert domain receptor ISO RGD PMID:18221855 RGD:2292019 NCBI chrNW_004955447:15,810,816...15,851,702
Ensembl chrNW_004955447:15,810,815...15,853,583
JBrowse link
G Vegfa vascular endothelial growth factor A ISO RGD PMID:18221855 RGD:2292019 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link
altered vascular endothelial growth factor signaling pathway involving the main players term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Flt4 fms related receptor tyrosine kinase 4 ISO RGD PMID:15563310 RGD:1334463 NCBI chrNW_004955408:98,995...137,922
Ensembl chrNW_004955408:107,056...140,056
JBrowse link
G Kdr kinase insert domain receptor ISO RGD PMID:18221855 RGD:2292019 NCBI chrNW_004955447:15,810,816...15,851,702
Ensembl chrNW_004955447:15,810,815...15,853,583
JBrowse link
G Vegfa vascular endothelial growth factor A ISO RGD PMID:18221855 RGD:2292019 NCBI chrNW_004955437:9,527,445...9,541,908 JBrowse link
altered visual phototransduction pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004955443:615,061...649,693
Ensembl chrNW_004955443:639,096...649,606
JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004955433:15,467,042...15,556,471 JBrowse link
G Guca1b guanylate cyclase activator 1B ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004955437:8,384,692...8,390,946
Ensembl chrNW_004955437:8,382,299...8,390,946
JBrowse link
G Pde6a phosphodiesterase 6A ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004955415:4,556,636...4,637,070
Ensembl chrNW_004955415:4,566,271...4,637,070
JBrowse link
G Pde6b phosphodiesterase 6B ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004955514:234,972...279,420
Ensembl chrNW_004955514:234,972...279,420
JBrowse link
G Pde6g phosphodiesterase 6G ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004955506:1,437,645...1,441,758
Ensembl chrNW_004955506:1,437,645...1,441,750
JBrowse link
G Rho rhodopsin ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004955429:17,787,337...17,791,982
Ensembl chrNW_004955429:17,787,337...17,791,982
JBrowse link
G Sag S-antigen visual arrestin ISO RGD PMID:20212494 RGD:8547536 NCBI chrNW_004955453:2,845,561...2,878,342
Ensembl chrNW_004955453:2,844,925...2,878,846
JBrowse link
altered Wnt signaling, canonical pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apc APC regulator of WNT signaling pathway ISO RGD PMID:18432252 RGD:2293188 NCBI chrNW_004955418:2,567,804...2,675,062
Ensembl chrNW_004955418:2,566,975...2,674,832
JBrowse link
G Axin1 axin 1 ISO RGD PMID:18432252 RGD:2293188 NCBI chrNW_004955442:16,845,728...16,898,301
Ensembl chrNW_004955442:16,843,152...16,898,430
JBrowse link
G Axin2 axin 2 ISO RGD PMID:18432252 RGD:2293188 NCBI chrNW_004955478:4,952,551...4,982,223
Ensembl chrNW_004955478:4,952,488...4,982,225
JBrowse link
G Ctnnb1 catenin beta 1 ISO RGD PMID:18432252, PMID:19078924 RGD:2293188, RGD:4143515 NCBI chrNW_004955420:29,030,716...29,047,447
Ensembl chrNW_004955420:29,030,716...29,047,449
JBrowse link
G Lrp5 LDL receptor related protein 5 ISO RGD PMID:18432252 RGD:2293188 NCBI chrNW_004955422:17,394,371...17,475,244
Ensembl chrNW_004955422:17,394,371...17,505,763
JBrowse link
G Tcf7l2 transcription factor 7 like 2 ISO RGD PMID:18772397 RGD:5490966 NCBI chrNW_004955431:18,020,309...18,207,926
Ensembl chrNW_004955431:18,020,409...18,209,134
JBrowse link
G Wnt9a Wnt family member 9A ISO RGD PMID:18772397 RGD:5490966 NCBI chrNW_004955581:422,028...438,321
Ensembl chrNW_004955581:421,451...438,380
JBrowse link
androgen signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ar androgen receptor ISO RGD PMID:16356826 RGD:2326084 NCBI chrNW_004955475:7,013,960...7,192,473
Ensembl chrNW_004955475:7,013,960...7,186,069
JBrowse link
G Carm1 coactivator associated arginine methyltransferase 1 ISO RGD PMID:17163421 RGD:2326123 NCBI chrNW_004955495:1,983,599...2,002,174
Ensembl chrNW_004955495:1,983,599...2,002,174
JBrowse link
G Crebbp CREB binding protein ISO RGD PMID:17163421 RGD:2326123 NCBI chrNW_004955442:13,559,496...13,691,913
Ensembl chrNW_004955442:13,559,496...13,692,004
JBrowse link
G Dnaja2 DnaJ heat shock protein family (Hsp40) member A2 ISO RGD PMID:16356826 RGD:2326084 NCBI chrNW_004955474:8,180,995...8,202,169
Ensembl chrNW_004955474:8,180,995...8,202,267
JBrowse link
G Ep300 E1A binding protein p300 ISO RGD PMID:17163421 RGD:2326123 NCBI chrNW_004955413:26,647,553...26,727,875
Ensembl chrNW_004955413:26,648,339...26,727,933
JBrowse link
G Hsp90aa1 heat shock protein 90 alpha family class A member 1 ISO RGD PMID:16356826 RGD:2326084 NCBI chrNW_004955538:1,469,544...1,475,010 JBrowse link
G Hsp90ab1 heat shock protein 90 alpha family class B member 1 ISO RGD PMID:16356826 RGD:2326084 NCBI chrNW_004955437:9,872,649...9,878,459
Ensembl chrNW_004955437:9,873,908...9,878,459
JBrowse link
G Hspa8 heat shock protein family A (Hsp70) member 8 ISO RGD PMID:16356826 RGD:2326084 NCBI chrNW_004955412:23,863,513...23,867,984
Ensembl chrNW_004955412:23,862,590...23,867,984
JBrowse link
G Ncoa1 nuclear receptor coactivator 1 ISO RGD PMID:17163421 RGD:2326123 NCBI chrNW_004955469:6,676,780...6,892,587
Ensembl chrNW_004955469:6,794,821...6,892,566
JBrowse link
G Ncoa2 nuclear receptor coactivator 2 ISO RGD PMID:17163421 RGD:2326123 NCBI chrNW_004955444:9,313,748...9,587,109
Ensembl chrNW_004955444:9,313,447...9,584,913
JBrowse link
G Ncoa3 nuclear receptor coactivator 3 ISO RGD PMID:17163421 RGD:2326123 NCBI chrNW_004955445:10,020,916...10,085,318
Ensembl chrNW_004955445:10,024,308...10,052,472
JBrowse link
G Ncor1 nuclear receptor corepressor 1 ISO RGD PMID:17163421 RGD:2326123 NCBI chrNW_004955467:1,408,292...1,568,539
Ensembl chrNW_004955467:1,409,281...1,546,842
JBrowse link
G Ncor2 nuclear receptor corepressor 2 ISO RGD PMID:17163421 RGD:2326123 NCBI chrNW_004955482:4,927,482...5,031,848
Ensembl chrNW_004955482:4,942,221...5,031,904
JBrowse link
G Pias2 protein inhibitor of activated STAT 2 ISO RGD PMID:9920921 RGD:70792 NCBI chrNW_004955402:32,263,616...32,358,532 JBrowse link
G Prmt1 protein arginine methyltransferase 1 ISO RGD PMID:17163421 RGD:2326123 NCBI chrNW_004955559:1,205,340...1,215,672
Ensembl chrNW_004955559:1,203,283...1,215,021
JBrowse link
G St13 ST13 Hsp70 interacting protein ISO RGD PMID:16356826 RGD:2326084 NCBI chrNW_004955413:26,478,579...26,507,671
Ensembl chrNW_004955413:26,476,469...26,507,671
JBrowse link
G Stip1 stress induced phosphoprotein 1 ISO RGD PMID:16356826 RGD:2326084 NCBI chrNW_004955422:20,871,921...20,886,952
Ensembl chrNW_004955422:20,870,325...20,886,952
JBrowse link
angiopoietin signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Angpt1 angiopoietin 1 ISO RGD PMID:15714275 RGD:1578337 NCBI chrNW_004955417:30,199,508...30,386,695
Ensembl chrNW_004955417:30,198,842...30,386,266
JBrowse link
G Tek TEK receptor tyrosine kinase ISO RGD PMID:15714275 RGD:1578337 NCBI chrNW_004955472:7,633,790...7,748,130
Ensembl chrNW_004955472:7,633,721...7,748,386
JBrowse link
angiotensin (1-7) signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin I converting enzyme 2 ISO RGD PMID:15638741 RGD:1581742 NCBI chrNW_004955519:2,591,229...2,643,705
Ensembl chrNW_004955519:2,591,248...2,633,495
JBrowse link
G Agt angiotensinogen ISO RGD PMID:15951342 RGD:1581938 NCBI chrNW_004955492:7,863,662...7,874,863
Ensembl chrNW_004955492:7,866,833...7,873,357
JBrowse link
G Mas1 MAS1 proto-oncogene, G protein-coupled receptor ISO RGD PMID:15951342, PMID:16520407 RGD:1581931, RGD:1581938 NCBI chrNW_004955439:20,956,862...20,957,839
Ensembl chrNW_004955439:20,956,862...20,957,839
JBrowse link
G Mme membrane metalloendopeptidase ISO RGD PMID:10642323, PMID:15638741, PMID:16520407 RGD:1581742, RGD:1581931, RGD:1581953 NCBI chrNW_004955448:6,193,113...6,311,666
Ensembl chrNW_004955448:6,226,059...6,314,949
JBrowse link
angiotensin II signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO RGD PMID:16141358 RGD:1581847 NCBI chrNW_004955492:7,863,662...7,874,863
Ensembl chrNW_004955492:7,866,833...7,873,357
JBrowse link
G Agtr1 angiotensin II receptor type 1 ISO RGD PMID:15590154 RGD:1579760 NCBI chrNW_004955474:8,733,942...8,781,305
Ensembl chrNW_004955474:8,733,942...8,781,255
JBrowse link
G Agtr2 angiotensin II receptor type 2 ISO RGD PMID:14657020 RGD:1566502 NCBI chrNW_004955534:3,653,112...3,654,248
Ensembl chrNW_004955534:3,653,157...3,654,248
JBrowse link
G Jak2 Janus kinase 2 ISO RGD PMID:16269269 RGD:1600094 NCBI chrNW_004955434:9,227,897...9,341,208
Ensembl chrNW_004955434:9,227,595...9,341,208
JBrowse link
G Pdpk1 3-phosphoinositide dependent protein kinase 1 ISO RGD PMID:14585963 RGD:1581775 NCBI chrNW_004955442:14,685,089...14,772,870
Ensembl chrNW_004955442:14,685,153...14,772,870
JBrowse link
G Pla2g6 phospholipase A2 group VI ISO RGD PMID:17613534 RGD:12910844 NCBI chrNW_004955413:24,431,592...24,482,229
Ensembl chrNW_004955413:24,429,589...24,482,537
JBrowse link
G Prkcz protein kinase C zeta ISO RGD PMID:16113073 RGD:1642674 NCBI chrNW_004955486:8,947,579...9,021,702
Ensembl chrNW_004955486:8,947,579...9,021,702
JBrowse link
angiotensin II signaling pathway via AT1 receptor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO RGD PMID:16141358 RGD:1581847 NCBI chrNW_004955492:7,863,662...7,874,863
Ensembl chrNW_004955492:7,866,833...7,873,357
JBrowse link
G Agtr1 angiotensin II receptor type 1 ISO RGD PMID:9287353, PMID:10977869, PMID:12446719, PMID:14559250 RGD:1581825, RGD:2316188, RGD:5133683, RGD:629553 NCBI chrNW_004955474:8,733,942...8,781,305
Ensembl chrNW_004955474:8,733,942...8,781,255
JBrowse link
G Agtrap angiotensin II receptor associated protein ISO RGD PMID:17875818 RGD:2314353 NCBI chrNW_004955486:2,137,249...2,149,978
Ensembl chrNW_004955486:2,137,065...2,149,882
JBrowse link
G Arap1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 ISO RGD PMID:14559250 RGD:2316188 NCBI chrNW_004955414:18,667,108...18,726,259
Ensembl chrNW_004955414:18,666,673...18,727,683
JBrowse link
G Arrb1 arrestin beta 1 ISO RGD PMID:16304060 RGD:5133417 NCBI chrNW_004955414:16,478,843...16,568,050
Ensembl chrNW_004955414:16,478,843...16,562,135
JBrowse link
G Arrb2 arrestin beta 2 ISO RGD PMID:16304060 RGD:5133417 NCBI chrNW_004955467:10,109,985...10,118,687
Ensembl chrNW_004955467:10,110,003...10,123,022
JBrowse link
G Gna11 G protein subunit alpha 11 ISO RGD PMID:16141358 RGD:1581847 NCBI chrNW_004955495:5,286,891...5,302,631
Ensembl chrNW_004955495:5,285,380...5,302,631
JBrowse link
G Gnaq G protein subunit alpha q ISO RGD PMID:16141358 RGD:1581847 NCBI chrNW_004955512:1,381,159...1,658,409 JBrowse link
G Grk2 G protein-coupled receptor kinase 2 ISO RGD PMID:16304060 RGD:5133417 NCBI chrNW_004955422:18,173,438...18,192,357
Ensembl chrNW_004955422:18,170,616...18,192,412
JBrowse link
G Grk3 G protein-coupled receptor kinase 3 ISO RGD PMID:16304060 RGD:5133417 NCBI chrNW_004955442:19,640,145...19,785,803
Ensembl chrNW_004955442:19,640,145...19,785,803
JBrowse link
G Grk5 G protein-coupled receptor kinase 5 ISO RGD PMID:16304060 RGD:5133417 NCBI chrNW_004955551:43,918...255,118
Ensembl chrNW_004955551:44,156...254,534
JBrowse link
G Grk6 G protein-coupled receptor kinase 6 ISO RGD PMID:16304060 RGD:5133417 NCBI chrNW_004955408:29,665,534...29,684,225
Ensembl chrNW_004955408:29,665,260...29,684,207
JBrowse link
G Jak2 Janus kinase 2 ISO RGD PMID:9287353, PMID:9314843 RGD:5133683, RGD:6478796 NCBI chrNW_004955434:9,227,897...9,341,208
Ensembl chrNW_004955434:9,227,595...9,341,208
JBrowse link
G Rgs2 regulator of G protein signaling 2 ISO RGD PMID:12588881 RGD:5133418 NCBI chrNW_004955406:30,261,757...30,265,389
Ensembl chrNW_004955406:30,261,757...30,266,005
JBrowse link
G Tyk2 tyrosine kinase 2 ISO RGD PMID:9314843 RGD:6478796 NCBI chrNW_004955495:1,618,099...1,637,996
Ensembl chrNW_004955495:1,617,999...1,636,068
JBrowse link
angiotensin II signaling pathway via AT2 receptor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO RGD PMID:16286564, PMID:16286568, PMID:22949090 RGD:1582434, RGD:1582435, RGD:7401256 NCBI chrNW_004955492:7,863,662...7,874,863
Ensembl chrNW_004955492:7,866,833...7,873,357
JBrowse link
G Agtr2 angiotensin II receptor type 2 ISO RGD PMID:10977869, PMID:22949090 RGD:1581825, RGD:7401256 NCBI chrNW_004955534:3,653,112...3,654,248
Ensembl chrNW_004955534:3,653,157...3,654,248
JBrowse link
G Cnksr1 connector enhancer of kinase suppressor of Ras 1 ISO RGD PMID:20889352 RGD:5133679 NCBI chrNW_004955452:5,624,334...5,634,861
Ensembl chrNW_004955452:5,624,306...5,634,923
JBrowse link
G Dusp1 dual specificity phosphatase 1 ISO RGD PMID:18804122 RGD:5133675 NCBI chrNW_004955408:25,481,294...25,484,381
Ensembl chrNW_004955408:25,481,294...25,484,381
JBrowse link
G Erbb3 erb-b2 receptor tyrosine kinase 3 ISO RGD PMID:20889352 RGD:5133679 NCBI chrNW_004955458:3,683,126...3,701,752
Ensembl chrNW_004955458:3,683,126...3,702,978
JBrowse link
G Gnai2 G protein subunit alpha i2 ISO RGD PMID:22949090 RGD:7401256 NCBI chrNW_004955532:2,059,038...2,079,120
Ensembl chrNW_004955532:2,059,038...2,079,957
JBrowse link
G Gnai3 G protein subunit alpha i3 ISO RGD PMID:22949090 RGD:7401256 NCBI chrNW_004955435:12,965,006...13,005,614
Ensembl chrNW_004955435:12,965,006...13,005,614
JBrowse link
G Mtus1 microtubule associated scaffold protein 1 ISO RGD PMID:20889352 RGD:5133679 NCBI chrNW_004955552:1,867,477...2,040,659
Ensembl chrNW_004955552:1,924,922...2,040,653
JBrowse link
G Ptpn6 protein tyrosine phosphatase non-receptor type 6 ISO RGD PMID:18804122 RGD:5133675 NCBI chrNW_004955413:4,525,954...4,547,177
Ensembl chrNW_004955413:4,525,954...4,547,177
JBrowse link
G Slc9a6 solute carrier family 9 member A6 ISO RGD PMID:20889352 RGD:5133679 NCBI chrNW_004955489:9,020,719...9,078,375
Ensembl chrNW_004955489:9,019,425...9,078,705
JBrowse link
G Timp3 TIMP metallopeptidase inhibitor 3 ISO RGD PMID:20889352 RGD:5133679 NCBI chrNW_004955405:41,613,976...41,655,813
Ensembl chrNW_004955405:41,613,966...41,655,813
JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 ISO RGD PMID:20889352 RGD:5133679 NCBI chrNW_004955412:15,668,332...15,845,384
Ensembl chrNW_004955412:15,668,332...15,845,372
JBrowse link
angiotensin III signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO RGD PMID:11295571 RGD:1582124 NCBI chrNW_004955492:7,863,662...7,874,863
Ensembl chrNW_004955492:7,866,833...7,873,357
JBrowse link
G Agtr1 angiotensin II receptor type 1 ISO RGD PMID:11295571 RGD:1582124 NCBI chrNW_004955474:8,733,942...8,781,305
Ensembl chrNW_004955474:8,733,942...8,781,255
JBrowse link
G Agtr2 angiotensin II receptor type 2 ISO RGD PMID:11295571 RGD:1582124 NCBI chrNW_004955534:3,653,112...3,654,248
Ensembl chrNW_004955534:3,653,157...3,654,248
JBrowse link
G Enpep glutamyl aminopeptidase ISO RGD PMID:15638741, PMID:16537183 RGD:1581649, RGD:1581742 NCBI chrNW_004955457:15,863,881...15,943,074 JBrowse link
angiotensin III signaling pathway via AT1 receptor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO RGD PMID:11100981 RGD:1582152 NCBI chrNW_004955492:7,863,662...7,874,863
Ensembl chrNW_004955492:7,866,833...7,873,357
JBrowse link
G Agtr1 angiotensin II receptor type 1 ISO RGD PMID:11100981 RGD:1582152 NCBI chrNW_004955474:8,733,942...8,781,305
Ensembl chrNW_004955474:8,733,942...8,781,255
JBrowse link
angiotensin III signaling pathway via AT2 receptor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO RGD PMID:16380540 RGD:1582118 NCBI chrNW_004955492:7,863,662...7,874,863
Ensembl chrNW_004955492:7,866,833...7,873,357
JBrowse link
G Agtr2 angiotensin II receptor type 2 ISO RGD PMID:16380540 RGD:1582118 NCBI chrNW_004955534:3,653,112...3,654,248
Ensembl chrNW_004955534:3,653,157...3,654,248
JBrowse link
angiotensin IV signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO RGD PMID:11282364 RGD:1582105 NCBI chrNW_004955492:7,863,662...7,874,863
Ensembl chrNW_004955492:7,866,833...7,873,357
JBrowse link
G Anpep alanyl aminopeptidase, membrane ISO RGD PMID:15638741, PMID:16537183 RGD:1581649, RGD:1581742 NCBI chrNW_004955416:15,415,981...15,442,032
Ensembl chrNW_004955416:15,424,932...15,444,075
JBrowse link
G Lnpep leucyl and cystinyl aminopeptidase ISO RGD PMID:11282364, PMID:12591177 RGD:1581864, RGD:1582105 NCBI chrNW_004955418:15,631,703...15,718,711
Ensembl chrNW_004955418:15,640,143...15,718,711
JBrowse link
G Rnpep arginyl aminopeptidase ISO RGD PMID:16537183 RGD:1581649 NCBI chrNW_004955406:38,103,701...38,122,162
Ensembl chrNW_004955406:38,103,426...38,122,358
JBrowse link
angiotensin signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agt angiotensinogen ISO RGD PMID:12676165 RGD:1566511 NCBI chrNW_004955492:7,863,662...7,874,863
Ensembl chrNW_004955492:7,866,833...7,873,357
JBrowse link
apelin signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apln apelin ISO RGD PMID:14645236 RGD:1304466 NCBI chrNW_004955473:5,346,822...5,356,359
Ensembl chrNW_004955473:5,346,747...5,356,359
JBrowse link
G Aplnr apelin receptor ISO RGD PMID:14645236 RGD:1304466 NCBI chrNW_004955511:2,321,445...2,324,417
Ensembl chrNW_004955511:2,322,920...2,324,068
JBrowse link
Arf family mediated signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap2a1 adaptor related protein complex 2 subunit alpha 1 ISO PID PID:200195 NCBI chrNW_004955559:1,117,380...1,143,403
Ensembl chrNW_004955559:1,117,636...1,143,409
JBrowse link
G Ap2m1 adaptor related protein complex 2 subunit mu 1 ISO PID PID:200195 NCBI chrNW_004955420:23,281,720...23,290,430
Ensembl chrNW_004955420:23,281,720...23,290,430
JBrowse link
G Arf1 ADP ribosylation factor 1 ISO PID PID:200195 NCBI chrNW_004955581:319,942...335,112
Ensembl chrNW_004955581:319,942...335,112
JBrowse link
G Arfgap1 ADP ribosylation factor GTPase activating protein 1 ISO PID PID:200195 NCBI chrNW_004955528:878,837...893,427
Ensembl chrNW_004955528:877,073...893,484
JBrowse link
G Arfip2 ADP ribosylation factor interacting protein 2 ISO PID PID:200195 NCBI chrNW_004955414:22,209,515...22,214,353
Ensembl chrNW_004955414:22,209,515...22,214,353
JBrowse link
G Arl6 ADP ribosylation factor like GTPase 6 ISO RGD PMID:15314642 RGD:1578724 NCBI chrNW_004955407:360,898...387,563
Ensembl chrNW_004955407:360,600...380,900
JBrowse link
G Asap1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 ISO PID PID:200195 NCBI chrNW_004955461:4,813,228...5,083,548
Ensembl chrNW_004955461:4,811,069...5,133,257
JBrowse link
G Cd4 CD4 molecule ISO PID PID:200195 NCBI chrNW_004955413:4,400,326...4,422,110
Ensembl chrNW_004955413:4,408,390...4,421,535
JBrowse link
G Clta clathrin light chain A ISO PID PID:200195 NCBI chrNW_004955472:96,958...117,230
Ensembl chrNW_004955472:97,235...117,144
JBrowse link
G Cltb clathrin light chain B ISO PID PID:200195 NCBI chrNW_004955408:28,692,933...28,717,566
Ensembl chrNW_004955408:28,692,933...28,717,566
JBrowse link
G Copa COPI coat complex subunit alpha ISO PID PID:200195 NCBI chrNW_004955468:12,062,942...12,111,048
Ensembl chrNW_004955468:12,059,089...12,111,805
JBrowse link
G Cyth2 cytohesin 2 ISO PID PID:200195 NCBI chrNW_004955559:2,014,740...2,021,234
Ensembl chrNW_004955559:2,014,740...2,021,891
JBrowse link
G Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 ISO PID PID:200195 NCBI chrNW_004955485:8,006,161...8,126,074
Ensembl chrNW_004955485:8,006,706...8,115,561
JBrowse link
G Gga3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 ISO PID PID:200195 NCBI chrNW_004955553:2,103,694...2,124,748
Ensembl chrNW_004955553:2,108,379...2,124,748
JBrowse link
G Git1 GIT ArfGAP 1 ISO RGD PMID:9826657 RGD:68782 NCBI chrNW_004955481:3,671,728...3,681,279
Ensembl chrNW_004955481:3,670,111...3,685,051
JBrowse link
G Gosr2 golgi SNAP receptor complex member 2 ISO PID PID:200195 NCBI chrNW_004955478:10,868,912...10,889,405 JBrowse link
G Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 ISO PID PID:200195 NCBI chrNW_004955559:2,080,085...2,087,579
Ensembl chrNW_004955559:2,080,085...2,087,579
JBrowse link
G Pip5k1a phosphatidylinositol-4-phosphate 5-kinase type 1 alpha ISO PID PID:200195 NCBI chrNW_004955588:555,818...605,459
Ensembl chrNW_004955588:555,821...605,723
JBrowse link
G Pld2 phospholipase D2 ISO PID PID:200195 NCBI chrNW_004955467:10,239,177...10,250,516
Ensembl chrNW_004955467:10,239,177...10,250,890
JBrowse link
G Rac1 Rac family small GTPase 1 ISO PID PID:200195 NCBI chrNW_004955460:13,270,159...13,295,562
Ensembl chrNW_004955460:13,270,159...13,311,351
JBrowse link
G Uso1 USO1 vesicle transport factor ISO PID PID:200195 NCBI chrNW_004955474:1,647,670...1,704,869
Ensembl chrNW_004955474:1,647,361...1,705,548
JBrowse link
aryl hydrocarbon receptor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahr aryl hydrocarbon receptor ISO RGD PMID:12586752 RGD:634668 NCBI chrNW_004955410:20,428,531...20,459,482 JBrowse link
G Arnt aryl hydrocarbon receptor nuclear translocator ISO RGD PMID:12586752 RGD:634668 NCBI chrNW_004955588:159,462...233,047
Ensembl chrNW_004955588:159,462...233,047
JBrowse link
G Arnt2 aryl hydrocarbon receptor nuclear translocator 2 ISO RGD PMID:12859947 RGD:631760 NCBI chrNW_004955416:11,279,866...11,429,365
Ensembl chrNW_004955416:11,308,846...11,429,365
JBrowse link
ataxia telangiectasia-mutated (ATM) signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atm ATM serine/threonine kinase ISO RGD PMID:21533982, PMID:23532176 RGD:8661225, RGD:8661232 NCBI chrNW_004955412:10,422,753...10,531,406
Ensembl chrNW_004955412:10,426,135...10,530,545
JBrowse link
G Baz1b bromodomain adjacent to zinc finger domain 1B ISO RGD PMID:24002223 RGD:8661242 NCBI chrNW_004955456:14,185,091...14,242,391
Ensembl chrNW_004955456:14,185,107...14,240,688
JBrowse link
G Brca1 BRCA1 DNA repair associated ISO RGD PMID:24326623 RGD:8661237 NCBI chrNW_004955451:16,819,463...16,870,780 JBrowse link
G Brcc3 BRCA1/BRCA2-containing complex subunit 3 ISO RGD PMID:24002223 RGD:8661242 NCBI chrNW_004955594:551,407...613,772
Ensembl chrNW_004955594:554,081...613,661
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 ISO RGD PMID:24002223 RGD:8661242 NCBI chrNW_004955444:8,336,071...8,655,041
Ensembl chrNW_004955444:8,495,530...8,655,100
JBrowse link
G Eya3 EYA transcriptional coactivator and phosphatase 3 ISO RGD PMID:24002223 RGD:8661242 NCBI chrNW_004955452:7,148,762...7,273,886
Ensembl chrNW_004955452:7,150,886...7,255,159
JBrowse link
G Kat5 lysine acetyltransferase 5 ISO RGD PMID:21533982, PMID:23532176 RGD:8661225, RGD:8661232 NCBI chrNW_004955422:19,557,498...19,565,044
Ensembl chrNW_004955422:19,557,498...19,565,036
JBrowse link
G Kdm4a lysine demethylase 4A ISO RGD PMID:24002223, PMID:24326623 RGD:8661237, RGD:8661242 NCBI chrNW_004955537:3,199,394...3,255,945 JBrowse link
G L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 ISO RGD PMID:24002223, PMID:24326623 RGD:8661237, RGD:8661242 NCBI chrNW_004955445:13,621,007...13,645,809 JBrowse link
G LOC102025775 histone H2AX ISO RGD PMID:21533982, PMID:24002223 RGD:8661232, RGD:8661242 NCBI chrNW_004955412:20,203,173...20,204,714
Ensembl chrNW_004955412:20,203,772...20,204,203
JBrowse link
G Mdc1 mediator of DNA damage checkpoint 1 ISO RGD PMID:21533982, PMID:24002223 RGD:8661232, RGD:8661242 NCBI chrNW_004955583:688,288...722,393 JBrowse link
G Nbn nibrin ISO RGD PMID:21533982 RGD:8661232 NCBI chrNW_004955417:6,840,916...6,880,479
Ensembl chrNW_004955417:6,839,312...6,880,133
JBrowse link
G Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 ISO RGD PMID:24002223 RGD:8661242 NCBI chrNW_004955422:21,047,184...21,055,596
Ensembl chrNW_004955422:21,047,184...21,055,616
JBrowse link
G Pias1 protein inhibitor of activated STAT 1 ISO RGD PMID:24002223 RGD:8661242 NCBI chrNW_004955450:7,896,741...7,991,045
Ensembl chrNW_004955450:7,896,741...7,991,027
JBrowse link
G Pias4 protein inhibitor of activated STAT 4 ISO RGD PMID:24002223 RGD:8661242 NCBI chrNW_004955495:4,760,576...4,791,422
Ensembl chrNW_004955495:4,761,862...4,791,490
JBrowse link
G Ppm1d protein phosphatase, Mg2+/Mn2+ dependent 1D ISO RGD PMID:21533982, PMID:24002223 RGD:8661232, RGD:8661242 NCBI chrNW_004955451:1,878,110...1,915,794
Ensembl chrNW_004955451:1,878,629...1,915,654
JBrowse link
G Ppp2ca protein phosphatase 2 catalytic subunit alpha ISO RGD PMID:21533982, PMID:24002223 RGD:8661232, RGD:8661242 NCBI chrNW_004955408:5,435,117...5,460,361
Ensembl chrNW_004955408:5,433,268...5,460,361
JBrowse link
G Ppp4c protein phosphatase 4 catalytic subunit ISO RGD PMID:24002223 RGD:8661242 NCBI chrNW_004955493:6,894,849...6,901,344
Ensembl chrNW_004955493:6,894,849...6,901,344
JBrowse link
G Ppp5c protein phosphatase 5 catalytic subunit ISO RGD PMID:21533982 RGD:8661232 NCBI chrNW_004955574:523,044...545,461
Ensembl chrNW_004955574:523,005...546,923
JBrowse link
G Ppp6c protein phosphatase 6 catalytic subunit ISO RGD PMID:24002223 RGD:8661242 NCBI chrNW_004955419:3,096,882...3,133,590
Ensembl chrNW_004955419:3,096,240...3,134,215
JBrowse link
G Psmd14 proteasome 26S subunit, non-ATPase 14 ISO RGD PMID:24002223 RGD:8661242 NCBI chrNW_004955449:12,306,026...12,400,908 JBrowse link
G Pwwp3a PWWP domain containing 3A, DNA repair factor ISO RGD PMID:24326623 RGD:8661237 NCBI chrNW_004955495:6,552,305...6,574,191
Ensembl chrNW_004955495:6,552,584...6,573,016
JBrowse link
G Rad50 RAD50 double strand break repair protein ISO RGD PMID:21533982 RGD:8661232 NCBI chrNW_004955408:3,953,801...4,035,494 JBrowse link
G Rbbp8 RB binding protein 8, endonuclease ISO RGD PMID:24326623 RGD:8661237 NCBI chrNW_004955402:11,245,857...11,331,872
Ensembl chrNW_004955402:11,245,819...11,335,367
JBrowse link
G Rif1 replication timing regulatory factor 1 ISO RGD PMID:24326623 RGD:8661237 NCBI chrNW_004955440:16,977,710...17,047,809
Ensembl chrNW_004955440:16,979,042...17,041,748
JBrowse link
G Rnf168 ring finger protein 168 ISO RGD PMID:21533982, PMID:24326623 RGD:8661232, RGD:8661237 NCBI chrNW_004955420:12,656,815...12,676,836
Ensembl chrNW_004955420:12,657,272...12,676,426
JBrowse link
G Rnf20 ring finger protein 20 ISO RGD PMID:23532176 RGD:8661225 NCBI chrNW_004955419:24,273,714...24,299,454
Ensembl chrNW_004955419:24,273,714...24,299,460
JBrowse link
G Rnf4 ring finger protein 4 ISO RGD PMID:24002223 RGD:8661242 NCBI chrNW_004955514:1,501,943...1,525,689
Ensembl chrNW_004955514:1,511,062...1,523,714
JBrowse link
G Rnf40 ring finger protein 40 ISO RGD PMID:23532176 RGD:8661225 NCBI chrNW_004955493:7,627,189...7,640,711
Ensembl chrNW_004955493:7,627,189...7,640,711
JBrowse link
G Rnf8 ring finger protein 8 ISO RGD PMID:21533982, PMID:24326623 RGD:8661232, RGD:8661237 NCBI chrNW_004955437:5,807,592...5,832,213
Ensembl chrNW_004955437:5,809,082...5,832,057
JBrowse link
G Tp53bp1 tumor protein p53 binding protein 1 ISO RGD PMID:24326623 RGD:8661237 NCBI chrNW_004955416:9,962,736...10,035,433
Ensembl chrNW_004955416:9,962,897...10,035,278
JBrowse link
G Trip12 thyroid hormone receptor interactor 12 ISO RGD PMID:24002223 RGD:8661242 NCBI chrNW_004955453:5,132,776...5,272,250
Ensembl chrNW_004955453:5,134,016...5,271,399
JBrowse link
G Ube2n ubiquitin conjugating enzyme E2 N ISO RGD PMID:21533982, PMID:24326623 RGD:8661232, RGD:8661237 NCBI chrNW_004955405:30,240,402...30,278,362 JBrowse link
G Ubr5 ubiquitin protein ligase E3 component n-recognin 5 ISO RGD PMID:24002223 RGD:8661242 NCBI chrNW_004955417:26,997,572...27,085,511
Ensembl chrNW_004955417:26,998,513...27,083,005
JBrowse link
G Usp16 ubiquitin specific peptidase 16 ISO RGD PMID:24002223 RGD:8661242 NCBI chrNW_004955407:28,375,246...28,413,279 JBrowse link
G Usp3 ubiquitin specific peptidase 3 ISO RGD PMID:24002223 RGD:8661242 NCBI chrNW_004955450:11,729,433...11,802,462
Ensembl chrNW_004955450:11,727,104...11,802,462
JBrowse link
G Usp44 ubiquitin specific peptidase 44 ISO RGD PMID:24002223 RGD:8661242 NCBI chrNW_004955405:31,977,045...32,006,733
Ensembl chrNW_004955405:31,977,602...32,006,810
JBrowse link
G Vcp valosin containing protein ISO RGD PMID:24002223, PMID:24326623 RGD:8661237, RGD:8661242 NCBI chrNW_004955472:1,111,649...1,124,076
Ensembl chrNW_004955472:1,107,164...1,124,076
JBrowse link
atrial natriuretic peptide signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Corin corin, serine peptidase ISO RGD PMID:17485366 RGD:1626338 NCBI chrNW_004955443:721,655...970,600
Ensembl chrNW_004955443:722,201...969,014
JBrowse link
G Nppa natriuretic peptide A ISO RGD PMID:12608696, PMID:15758553, PMID:16010968 RGD:1578335, RGD:1580001, RGD:1626242 NCBI chrNW_004955486:2,061,196...2,062,805
Ensembl chrNW_004955486:2,060,735...2,063,003
JBrowse link
G Npr1 natriuretic peptide receptor 1 ISO RGD PMID:7552344 RGD:1626243 NCBI chrNW_004955545:323,386...338,654
Ensembl chrNW_004955545:323,956...338,097
JBrowse link
auditory mechanotransduction pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actb actin beta ISO RGD PMID:20624897 RGD:8547669 NCBI chrNW_004955460:10,358,100...10,361,585
Ensembl chrNW_004955460:10,356,699...10,361,585
JBrowse link
G Actg1 actin gamma 1 ISO RGD PMID:20624897 RGD:8547669 NCBI chrNW_004955506:1,546,678...1,549,611
Ensembl chrNW_004955506:1,546,678...1,552,105
JBrowse link
G Adgrv1 adhesion G protein-coupled receptor V1 ISO RGD PMID:20624897 RGD:8547669 NCBI chrNW_004955418:20,603,323...21,039,891 JBrowse link
G Cdh23 cadherin related 23 ISO RGD PMID:19804752, PMID:22177415 RGD:8547667, RGD:8547671 NCBI chrNW_004955437:19,683,792...20,044,718
Ensembl chrNW_004955437:19,684,473...20,003,819
JBrowse link
G Espn espin ISO RGD PMID:19804752, PMID:20624897 RGD:8547667, RGD:8547669 NCBI chrNW_004955486:6,130,190...6,156,859 JBrowse link
G Myo15a myosin XVA ISO RGD PMID:19804752 RGD:8547667 NCBI chrNW_004955478:11,131,908...11,186,465
Ensembl chrNW_004955478:11,132,719...11,186,378
JBrowse link
G Myo1c myosin IC ISO RGD PMID:19804752 RGD:8547667 NCBI chrNW_004955481:1,676,788...1,701,421
Ensembl chrNW_004955481:1,676,728...1,703,488
JBrowse link
G Myo3a myosin IIIA ISO RGD PMID:19804752 RGD:8547667 NCBI chrNW_004955429:3,172,457...3,358,688
Ensembl chrNW_004955429:3,172,996...3,358,688
JBrowse link
G Myo6 myosin VI ISO RGD PMID:20624897, PMID:22715884 RGD:8547669, RGD:8547672 NCBI chrNW_004955502:4,219,067...4,356,988
Ensembl chrNW_004955502:4,218,885...4,356,988
JBrowse link
G Myo7a myosin VIIA ISO RGD PMID:19804752, PMID:22177415 RGD:8547667, RGD:8547671 NCBI chrNW_004955414:14,576,356...14,647,500
Ensembl chrNW_004955414:14,576,356...14,647,500
JBrowse link
G Otof otoferlin ISO RGD PMID:22715884 RGD:8547672 NCBI chrNW_004955469:8,480,099...8,569,215
Ensembl chrNW_004955469:8,481,231...8,569,265
JBrowse link
G Pcdh15 protocadherin related 15 ISO RGD PMID:19804752, PMID:22177415 RGD:8547667, RGD:8547671 NCBI chrNW_004955425:8,443,523...9,203,177
Ensembl chrNW_004955425:8,428,680...8,899,028
JBrowse link
G Pls1 plastin 1 ISO RGD PMID:20624897 RGD:8547669 NCBI chrNW_004955508:3,215,304...3,324,240
Ensembl chrNW_004955508:3,213,646...3,260,554
JBrowse link
G Pls3 plastin 3 ISO RGD PMID:20624897 RGD:8547669 NCBI chrNW_004955490:125,913...221,152
Ensembl chrNW_004955490:122,328...221,388
JBrowse link
G Ptprq protein tyrosine phosphatase receptor type Q ISO RGD PMID:20624897 RGD:8547669 NCBI chrNW_004955405:19,123,905...19,318,619
Ensembl chrNW_004955405:19,123,905...19,318,619
JBrowse link
G Slc17a8 solute carrier family 17 member 8 ISO RGD PMID:22715884 RGD:8547672 NCBI chrNW_004955405:36,063,688...36,115,312
Ensembl chrNW_004955405:36,063,688...36,115,312
JBrowse link
G Ush1c USH1 protein network component harmonin ISO RGD PMID:19804752, PMID:22177415 RGD:8547667, RGD:8547671 NCBI chrNW_004955414:32,303,045...32,351,401
Ensembl chrNW_004955414:32,298,759...32,351,505
JBrowse link
G Ush1g USH1 protein network component sans ISO RGD PMID:22177415 RGD:8547671 NCBI chrNW_004955553:1,788,443...1,795,139
Ensembl chrNW_004955553:1,788,401...1,796,441
JBrowse link
G Ush2a usherin ISO RGD PMID:20624897 RGD:8547669 NCBI chrNW_004955406:1,837,831...2,499,664
Ensembl chrNW_004955406:1,838,885...2,496,980
JBrowse link
G Whrn whirlin ISO RGD PMID:19804752 RGD:8547667 NCBI chrNW_004955419:13,116,001...13,207,266
Ensembl chrNW_004955419:13,116,001...13,207,266
JBrowse link
bile acid signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb11 ATP binding cassette subfamily B member 11 ISO RGD PMID:27090119 RGD:15090804 NCBI chrNW_004955449:5,412,958...5,511,629
Ensembl chrNW_004955449:5,412,876...5,512,701
JBrowse link
G Abcc2 ATP binding cassette subfamily C member 2 ISO RGD PMID:27090119 RGD:15090804 NCBI chrNW_004955507:5,724,788...5,791,281
Ensembl chrNW_004955507:5,724,762...5,790,812
JBrowse link
G Abcc4 ATP binding cassette subfamily C member 4 ISO RGD PMID:30223280 RGD:15045612 NCBI chrNW_004955404:14,700,808...14,927,944
Ensembl chrNW_004955404:14,700,808...14,928,617
JBrowse link
G Abcg5 ATP binding cassette subfamily G member 5 ISO RGD PMID:25263431 RGD:15045610 NCBI chrNW_004955441:10,964,588...10,987,771
Ensembl chrNW_004955441:10,964,858...10,986,967
JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 ISO RGD PMID:25263431 RGD:15045610 NCBI chrNW_004955441:10,982,307...11,004,789
Ensembl chrNW_004955441:10,982,307...11,009,116
JBrowse link
G Acat2 acetyl-CoA acetyltransferase 2 ISO RGD PMID:25263431 RGD:15045610 NCBI chrNW_004955439:21,123,886...21,142,562
Ensembl chrNW_004955439:21,122,923...21,142,480
JBrowse link
G Aldh1l1 aldehyde dehydrogenase 1 family member L1 ISO RGD PMID:30223280 RGD:15045612 NCBI chrNW_004955421:21,420,264...21,506,004
Ensembl chrNW_004955421:21,420,147...21,527,037
JBrowse link
G Cideb cell death inducing DFFA like effector b ISO RGD PMID:25263431 RGD:15045610 NCBI chrNW_004955409:35,993,853...35,996,935
Ensembl chrNW_004955409:35,993,853...35,996,935
JBrowse link
G Dgat2 diacylglycerol O-acyltransferase 2 ISO RGD PMID:25263431 RGD:15045610 NCBI chrNW_004955414:16,059,781...16,089,727
Ensembl chrNW_004955414:16,059,781...16,089,727
JBrowse link
G Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase ISO RGD PMID:25263431 RGD:15045610 NCBI chrNW_004955425:25,362,165...25,380,611
Ensembl chrNW_004955425:25,359,884...25,380,745
JBrowse link
G LOC102004889 sterol 26-hydroxylase, mitochondrial ISO RGD PMID:28774887 RGD:15045601 NCBI chrNW_004955453:14,601,495...14,647,383
Ensembl chrNW_004955453:14,601,444...14,647,366
JBrowse link
G LOC102008593 cholesterol 7-alpha-monooxygenase ISO RGD PMID:28774887, PMID:30223280 RGD:15045601, RGD:15045612 NCBI chrNW_004955454:17,035,105...17,078,854
Ensembl chrNW_004955454:17,036,204...17,042,756
JBrowse link
G LOC102019604 7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase ISO RGD PMID:25263431 RGD:15045610 NCBI chrNW_004955420:27,988,067...27,990,637 JBrowse link
G Nr1h3 nuclear receptor subfamily 1 group H member 3 ISO RGD PMID:25263431 RGD:15045610 NCBI chrNW_004955422:940,310...954,170
Ensembl chrNW_004955422:940,310...949,049
JBrowse link
G Nr1h4 nuclear receptor subfamily 1 group H member 4 ISO RGD PMID:25263431, PMID:27090119, PMID:28774887, PMID:29235094, PMID:30061734, PMID:30068870, PMID:30223280 RGD:15042870, RGD:15042872, RGD:15045601, RGD:15045610, RGD:15045612, RGD:15090804, RGD:15092071 NCBI chrNW_004955405:36,160,360...36,236,258
Ensembl chrNW_004955405:36,160,049...36,237,751
JBrowse link
G Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ISO RGD PMID:27090119 RGD:15090804 NCBI chrNW_004955426:25,079,718...25,102,090
Ensembl chrNW_004955426:25,079,718...25,102,090
JBrowse link
G Slc10a1 solute carrier family 10 member 1 ISO RGD PMID:27090119 RGD:15090804 NCBI chrNW_004955466:597,081...609,254
Ensembl chrNW_004955466:597,204...608,756
JBrowse link
G Slco1a2 solute carrier organic anion transporter family member 1A2 ISO RGD PMID:27090119 RGD:15090804 NCBI chrNW_004955413:16,821,808...16,910,511
Ensembl chrNW_004955413:16,821,791...16,912,903
JBrowse link
Bone morphogenetic proteins signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ahsg alpha 2-HS glycoprotein ISO PID PID:200144 NCBI chrNW_004955420:21,071,111...21,078,397
Ensembl chrNW_004955420:21,069,681...21,078,298
JBrowse link
G Bambi BMP and activin membrane bound inhibitor ISO PID PID:200144 NCBI chrNW_004955429:21,024,396...21,025,890
Ensembl chrNW_004955429:21,024,374...21,025,890
JBrowse link
G Bmp2 bone morphogenetic protein 2 ISO PID
RGD
PMID:16361357 PID:200144, RGD:1580077 NCBI chrNW_004955415:17,048,374...17,058,172
Ensembl chrNW_004955415:17,048,030...17,060,181
JBrowse link
G Bmp4 bone morphogenetic protein 4 ISO PID
RGD
PMID:18985159 PID:200144, RGD:11553861 NCBI chrNW_004955409:9,432,835...9,439,680
Ensembl chrNW_004955409:9,432,841...9,440,303
JBrowse link
G Bmp6 bone morphogenetic protein 6 ISO PID PID:200144 NCBI chrNW_004955465:6,053,600...6,201,254
Ensembl chrNW_004955465:6,054,931...6,200,377
JBrowse link
G Bmp7 bone morphogenetic protein 7 ISO PID PID:200144 NCBI chrNW_004955445:2,154,057...2,235,594
Ensembl chrNW_004955445:2,153,170...2,235,795
JBrowse link
G Bmpr1a bone morphogenetic protein receptor type 1A ISO PID PID:200144 NCBI chrNW_004955510:5,812,571...5,936,312
Ensembl chrNW_004955510:5,905,008...5,936,312
JBrowse link
G Bmpr1b bone morphogenetic protein receptor type 1B ISO PID PID:200144 NCBI chrNW_004955405:5,408,171...5,784,930
Ensembl chrNW_004955405:5,700,162...5,787,957
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 ISO RGD
PID
PMID:16361357 PID:200144, RGD:1580077 NCBI chrNW_004955457:12,235,780...12,315,680
Ensembl chrNW_004955457:12,235,780...12,316,727
JBrowse link
G Cer1 cerberus 1, DAN family BMP antagonist ISO PID PID:200144 NCBI chrNW_004955434:17,738,281...17,740,823
Ensembl chrNW_004955434:17,734,495...17,740,823
JBrowse link
G Chrd chordin ISO PID PID:200144 NCBI chrNW_004955420:23,111,690...23,120,038
Ensembl chrNW_004955420:23,112,093...23,120,036
JBrowse link
G Chrdl1 chordin like 1 ISO PID PID:200144 NCBI chrNW_004955490:5,108,308...5,218,679
Ensembl chrNW_004955490:5,108,308...5,257,445
JBrowse link
G Ctdsp1 CTD small phosphatase 1 ISO PID PID:200144 NCBI chrNW_004955453:14,971,276...14,976,667
Ensembl chrNW_004955453:14,968,484...14,976,667
JBrowse link
G Ctdsp2 CTD small phosphatase 2 ISO PID PID:200144 NCBI chrNW_004955458:5,523,548...5,549,190
Ensembl chrNW_004955458:5,523,548...5,549,398
JBrowse link
G Ctdspl CTD small phosphatase like ISO PID PID:200144 NCBI chrNW_004955421:4,705,664...4,831,463
Ensembl chrNW_004955421:4,705,664...4,831,726
JBrowse link
G Fst follistatin ISO PID PID:200144 NCBI chrNW_004955446:13,925,833...13,932,104
Ensembl chrNW_004955446:13,925,776...13,932,104
JBrowse link
G Grem1 gremlin 1, DAN family BMP antagonist ISO PID PID:200144 NCBI chrNW_004955416:1,812,725...1,825,528
Ensembl chrNW_004955416:1,812,676...1,826,271
JBrowse link
G Gsk3b glycogen synthase kinase 3 beta ISO PID PID:200144 NCBI chrNW_004955427:19,489,972...19,671,137
Ensembl chrNW_004955427:19,495,422...19,671,137
JBrowse link
G Hjv hemojuvelin BMP co-receptor ISO PID PID:200144 NCBI chrNW_004955568:80,386...84,707
Ensembl chrNW_004955568:80,444...84,834
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 ISO PID PID:200144 NCBI chrNW_004955411:17,177,335...17,229,957
Ensembl chrNW_004955411:17,177,335...17,229,957
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 ISO PID PID:200144 NCBI chrNW_004955442:17,284,232...17,380,026
Ensembl chrNW_004955442:17,284,232...17,380,020
JBrowse link
G Nog noggin ISO PID PID:200144 NCBI chrNW_004955451:6,192,368...6,193,766
Ensembl chrNW_004955451:6,193,042...6,193,740
JBrowse link
G Nup214 nucleoporin 214 ISO PID PID:200144 NCBI chrNW_004955513:955,639...1,038,912 JBrowse link
G Ppm1a protein phosphatase, Mg2+/Mn2+ dependent 1A ISO PID PID:200144 NCBI chrNW_004955466:9,315,227...9,331,213 JBrowse link
G Ppp1ca protein phosphatase 1 catalytic subunit alpha ISO PID PID:200144 NCBI chrNW_004955422:18,076,670...18,079,859
Ensembl chrNW_004955422:18,076,670...18,079,859
JBrowse link
G Ppp1r15a protein phosphatase 1 regulatory subunit 15A ISO PID PID:200144 NCBI chrNW_004955559:1,750,227...1,753,607 JBrowse link
G Rgma repulsive guidance molecule BMP co-receptor a ISO PID PID:200144 NCBI chrNW_004955416:21,221,023...21,261,831
Ensembl chrNW_004955416:21,221,023...21,261,831
JBrowse link
G Rgmb repulsive guidance molecule BMP co-receptor b ISO PID PID:200144 NCBI chrNW_004955418:14,305,634...14,321,804
Ensembl chrNW_004955418:14,308,392...14,326,762
JBrowse link
G Ski SKI proto-oncogene ISO PID PID:200144 NCBI chrNW_004955486:8,857,693...8,921,821
Ensembl chrNW_004955486:8,857,693...8,921,821
JBrowse link
G Slc39a13 solute carrier family 39 member 13 ISO RGD PMID:18985159 RGD:11553861 NCBI chrNW_004955422:845,076...852,772
Ensembl chrNW_004955422:845,678...852,772
JBrowse link
G Smad1 SMAD family member 1 ISO PID
RGD
PMID:16361357, PMID:18985159 PID:200144, RGD:11553861, RGD:1580077 NCBI chrNW_004955428:1,357,398...1,429,521
Ensembl chrNW_004955428:1,361,085...1,429,948
JBrowse link
G Smad4 SMAD family member 4 ISO PID PID:200144 NCBI chrNW_004955402:35,956,080...36,001,746
Ensembl chrNW_004955402:35,961,165...35,994,538
JBrowse link
G Smad5 SMAD family member 5 ISO RGD
PID
PMID:16361357, PMID:18985159 PID:200144, RGD:11553861, RGD:1580077 NCBI chrNW_004955408:31,183,727...31,228,355
Ensembl chrNW_004955408:31,183,659...31,229,384
JBrowse link
G Smad6 SMAD family member 6 ISO PID PID:200144 NCBI chrNW_004955450:9,005,332...9,070,790 JBrowse link
G Smad7 SMAD family member 7 ISO PID PID:200144 NCBI chrNW_004955402:34,028,184...34,058,949
Ensembl chrNW_004955402:34,028,063...34,058,291
JBrowse link
G Smad9 SMAD family member 9 ISO RGD
PID
PMID:16361357 PID:200144, RGD:1580077 NCBI chrNW_004955431:9,117,616...9,184,920 JBrowse link
G Smurf1 SMAD specific E3 ubiquitin protein ligase 1 ISO PID PID:200144 NCBI chrNW_004955460:14,774,545...14,860,783
Ensembl chrNW_004955460:14,774,545...14,802,879
JBrowse link
G Smurf2 SMAD specific E3 ubiquitin protein ligase 2 ISO PID PID:200144 NCBI chrNW_004955478:7,205,266...7,336,390
Ensembl chrNW_004955478:7,270,055...7,336,390
JBrowse link
G Sostdc1 sclerostin domain containing 1 ISO PID PID:200144 NCBI chrNW_004955410:19,657,805...19,662,121
Ensembl chrNW_004955410:19,657,029...19,662,131
JBrowse link
G Tab1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 ISO PID PID:200144 NCBI chrNW_004955413:25,290,733...25,315,267
Ensembl chrNW_004955413:25,290,828...25,313,969
JBrowse link
G Tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 ISO PID PID:200144 NCBI chrNW_004955439:11,826,469...11,903,103
Ensembl chrNW_004955439:11,826,469...11,903,103
JBrowse link
G Xiap X-linked inhibitor of apoptosis ISO PID PID:200144 NCBI chrNW_004955473:10,823,795...10,878,256
Ensembl chrNW_004955473:10,827,435...10,840,604
JBrowse link
G Zfyve16 zinc finger FYVE-type containing 16 ISO PID PID:200144 NCBI chrNW_004955418:29,353,276...29,403,336 JBrowse link
brain natriuretic peptide signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nppb natriuretic peptide B ISO RGD PMID:7552344 RGD:1626243 NCBI chrNW_004955486:2,054,775...2,056,130 JBrowse link
G Npr1 natriuretic peptide receptor 1 ISO RGD PMID:7552344 RGD:1626243 NCBI chrNW_004955545:323,386...338,654
Ensembl chrNW_004955545:323,956...338,097
JBrowse link
brain-derived neurotrophic factor signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bdnf brain derived neurotrophic factor ISO RGD PMID:23670594 RGD:11062158 NCBI chrNW_004955476:6,773,244...6,822,201
Ensembl chrNW_004955476:6,772,088...6,822,588
JBrowse link
G Frs2 fibroblast growth factor receptor substrate 2 ISO RGD PMID:23670594 RGD:11062158 NCBI chrNW_004955405:9,785,857...9,884,220
Ensembl chrNW_004955405:9,843,925...9,884,220
JBrowse link
G Grb2 growth factor receptor bound protein 2 ISO RGD PMID:23670594 RGD:11062158 NCBI chrNW_004955553:2,186,590...2,258,964
Ensembl chrNW_004955553:2,186,590...2,259,456
JBrowse link
G Ntrk2 neurotrophic receptor tyrosine kinase 2 ISO RGD PMID:23670594 RGD:11062158 NCBI chrNW_004955432:2,284,283...2,629,631
Ensembl chrNW_004955432:2,288,898...2,630,878
JBrowse link
G Shc1 SHC adaptor protein 1 ISO RGD PMID:23670594 RGD:11062158 NCBI chrNW_004955545:1,468,391...1,479,209
Ensembl chrNW_004955545:1,468,391...1,476,814
JBrowse link
G Tiam1 TIAM Rac1 associated GEF 1 ISO RGD PMID:23670594 RGD:11062158 NCBI chrNW_004955407:30,804,769...31,178,420
Ensembl chrNW_004955407:30,803,653...30,942,854
JBrowse link
c-Jun N-terminal kinases MAPK signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 ISO RGD PMID:8910292, PMID:9305638 RGD:2293876, RGD:2293879 NCBI chrNW_004955452:2,255,940...2,299,042
Ensembl chrNW_004955452:2,255,117...2,299,042
JBrowse link
G Dusp1 dual specificity phosphatase 1 ISO RGD PMID:17208316 RGD:2293881 NCBI chrNW_004955408:25,481,294...25,484,381
Ensembl chrNW_004955408:25,481,294...25,484,381
JBrowse link
G Dusp10 dual specificity phosphatase 10 ISO RGD PMID:17208316 RGD:2293881 NCBI chrNW_004955520:2,338,548...2,371,591
Ensembl chrNW_004955520:2,339,521...2,372,400
JBrowse link
G Dusp16 dual specificity phosphatase 16 ISO RGD PMID:17208316 RGD:2293881 NCBI chrNW_004955413:9,404,259...9,481,061
Ensembl chrNW_004955413:9,385,100...9,474,711
JBrowse link
G Dusp19 dual specificity phosphatase 19 ISO RGD PMID:11959862 RGD:2314491 NCBI chrNW_004955403:14,421,057...14,439,829
Ensembl chrNW_004955403:14,420,243...14,440,210
JBrowse link
G Dusp8 dual specificity phosphatase 8 ISO RGD PMID:17208316 RGD:2293881 NCBI chrNW_004955476:10,816,647...10,826,787
Ensembl chrNW_004955476:10,813,336...10,826,801
JBrowse link
G Map2k4 mitogen-activated protein kinase kinase 4 ISO RGD PMID:10051439, PMID:12524169, PMID:17064355, PMID:17306896 RGD:2293875, RGD:2298561, RGD:2298577, RGD:2298708 NCBI chrNW_004955467:5,188,036...5,295,570
Ensembl chrNW_004955467:5,187,356...5,307,692
JBrowse link
G Map2k7 mitogen-activated protein kinase kinase 7 ISO RGD PMID:10051439, PMID:15680699, PMID:17064355, PMID:17306896 RGD:2293875, RGD:2298561, RGD:2298567, RGD:2298577 NCBI chrNW_004955563:1,352,638...1,361,598
Ensembl chrNW_004955563:1,352,638...1,361,598
JBrowse link
G Map3k1 mitogen-activated protein kinase kinase kinase 1 ISO RGD PMID:9305638, PMID:17306896 RGD:2293875, RGD:2293879 NCBI chrNW_004955446:11,022,091...11,090,136
Ensembl chrNW_004955446:11,021,971...11,090,136
JBrowse link
G Map3k10 mitogen-activated protein kinase kinase kinase 10 ISO RGD PMID:17306896 RGD:2293875 NCBI chrNW_004955578:1,018,280...1,037,553
Ensembl chrNW_004955578:1,018,560...1,036,901
JBrowse link
G Map3k11 mitogen-activated protein kinase kinase kinase 11 ISO RGD PMID:8910292, PMID:15680699, PMID:17064355, PMID:17306896 RGD:2293875, RGD:2293876, RGD:2298567, RGD:2298577 NCBI chrNW_004955422:19,651,371...19,666,468
Ensembl chrNW_004955422:19,651,372...19,667,924
JBrowse link
G Map3k12 mitogen-activated protein kinase kinase kinase 12 ISO RGD PMID:17306896 RGD:2293875 NCBI chrNW_004955458:774,478...793,654
Ensembl chrNW_004955458:774,478...785,226
JBrowse link
G Map3k13 mitogen-activated protein kinase kinase kinase 13 ISO RGD PMID:17306896 RGD:2293875 NCBI chrNW_004955420:22,064,384...22,190,662
Ensembl chrNW_004955420:22,064,384...22,224,789
JBrowse link
G Map3k2 mitogen-activated protein kinase kinase kinase 2 ISO RGD PMID:9305638, PMID:17306896 RGD:2293875, RGD:2293879 NCBI chrNW_004955459:3,135,959...3,196,971
Ensembl chrNW_004955459:3,136,010...3,196,971
JBrowse link
G Map3k20 mitogen-activated protein kinase kinase kinase 20 ISO RGD PMID:17306896 RGD:2293875 NCBI chrNW_004955449:1,976,186...2,139,044 JBrowse link
G Map3k21 mitogen-activated protein kinase kinase kinase 21 ISO RGD PMID:17306896 RGD:2293875 NCBI chrNW_004955492:5,987,338...6,029,323
Ensembl chrNW_004955492:5,987,070...6,028,995
JBrowse link
G Map3k3 mitogen-activated protein kinase kinase kinase 3 ISO RGD PMID:9305638, PMID:17306896 RGD:2293875, RGD:2293879 NCBI chrNW_004955478:8,122,999...8,185,138
Ensembl chrNW_004955478:8,125,436...8,199,253
JBrowse link
G Map3k4 mitogen-activated protein kinase kinase kinase 4 ISO RGD PMID:9305638, PMID:17306896 RGD:2293875, RGD:2293879 NCBI chrNW_004955439:20,144,059...20,263,885
Ensembl chrNW_004955439:20,144,059...20,263,879
JBrowse link
G Map3k5 mitogen-activated protein kinase kinase kinase 5 ISO RGD PMID:12215209, PMID:17306896 RGD:2293875, RGD:2296020 NCBI chrNW_004955439:162,499...376,919
Ensembl chrNW_004955439:163,103...377,808
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 ISO RGD PMID:17306896 RGD:2293875 NCBI chrNW_004955411:17,177,335...17,229,957
Ensembl chrNW_004955411:17,177,335...17,229,957
JBrowse link
G Map3k9 mitogen-activated protein kinase kinase kinase 9 ISO RGD PMID:17306896 RGD:2293875 NCBI chrNW_004955523:4,326,315...4,387,390
Ensembl chrNW_004955523:4,326,317...4,385,544
JBrowse link
G Mapk10 mitogen-activated protein kinase 10 ISO RGD PMID:10051439, PMID:15680699, PMID:17306896 RGD:2293875, RGD:2298561, RGD:2298567 NCBI chrNW_004955474:3,451,656...3,772,405
Ensembl chrNW_004955474:3,624,679...3,772,458
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 ISO RGD PMID:10051439, PMID:17064355, PMID:17306896 RGD:2293875, RGD:2298561, RGD:2298577 NCBI chrNW_004955556:1,593,552...1,705,543
Ensembl chrNW_004955556:1,593,494...1,665,784
JBrowse link
G Mapk8ip1 mitogen-activated protein kinase 8 interacting protein 1 ISO RGD PMID:15816852, PMID:17726577 RGD:1579811, RGD:2293880 NCBI chrNW_004955422:2,064,010...2,081,681
Ensembl chrNW_004955422:2,061,851...2,082,514
JBrowse link
G Mapk8ip2 mitogen-activated protein kinase 8 interacting protein 2 ISO RGD PMID:17726577 RGD:2293880 NCBI chrNW_004955413:33,608,092...33,617,984
Ensembl chrNW_004955413:33,608,655...33,617,255
JBrowse link
G Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 ISO RGD PMID:17726577 RGD:2293880 NCBI chrNW_004955442:15,498,909...15,545,298
Ensembl chrNW_004955442:15,498,909...15,545,298
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 ISO RGD PMID:10051439, PMID:17064355, PMID:17306896 RGD:2293875, RGD:2298561, RGD:2298577 NCBI chrNW_004955408:391,094...430,638
Ensembl chrNW_004955408:391,094...430,981
JBrowse link
G Rac1 Rac family small GTPase 1 ISO RGD PMID:8910292, PMID:9305638 RGD:2293876, RGD:2293879 NCBI chrNW_004955460:13,270,159...13,295,562
Ensembl chrNW_004955460:13,270,159...13,311,351
JBrowse link
G Rapgef1 Rap guanine nucleotide exchange factor 1 ISO RGD PMID:10811109 RGD:11534984 NCBI chrNW_004955513:1,224,418...1,328,176
Ensembl chrNW_004955513:1,226,205...1,315,922
JBrowse link
G Spp1 secreted phosphoprotein 1 ISO RGD PMID:15757900 RGD:1581337 NCBI chrNW_004955474:1,914,477...1,922,025
Ensembl chrNW_004955474:1,913,829...1,922,016
JBrowse link
G Traf2 TNF receptor associated factor 2 ISO RGD PMID:12215209 RGD:2296020 NCBI chrNW_004955513:4,964,692...4,984,359
Ensembl chrNW_004955513:4,967,984...4,983,987
JBrowse link
C-type natriuretic peptide signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nppc natriuretic peptide C ISO RGD PMID:15337698, PMID:16537417 RGD:1580149, RGD:1601488 NCBI chrNW_004955453:3,884,580...3,888,494
Ensembl chrNW_004955453:3,884,560...3,888,850
JBrowse link
G Npr2 natriuretic peptide receptor 2 ISO RGD PMID:16537417 RGD:1601488 NCBI chrNW_004955472:506,351...523,647
Ensembl chrNW_004955472:506,351...523,316
JBrowse link
G Npr3 natriuretic peptide receptor 3 ISO RGD PMID:15044621 RGD:1581459 NCBI chrNW_004955426:18,491,350...18,559,299
Ensembl chrNW_004955426:18,491,350...18,553,743
JBrowse link
cadherin mediated signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh2 cadherin 2 ISO RGD PMID:16515795 RGD:1582675 NCBI chrNW_004955402:15,829,895...16,049,874
Ensembl chrNW_004955402:15,831,110...16,049,890
JBrowse link
calcineurin signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nfatc2 nuclear factor of activated T cells 2 ISO RGD PMID:15336966 RGD:1579951 NCBI chrNW_004955445:7,035,876...7,153,199
Ensembl chrNW_004955445:7,035,876...7,153,237
JBrowse link
G Nfatc3 nuclear factor of activated T cells 3 ISO RGD PMID:15336966 RGD:1579951 NCBI chrNW_004955484:8,433,765...8,558,005
Ensembl chrNW_004955484:8,436,330...8,526,680
JBrowse link
G Nfatc4 nuclear factor of activated T cells 4 ISO RGD PMID:15336966 RGD:1579951 NCBI chrNW_004955409:35,931,208...35,941,555
Ensembl chrNW_004955409:35,931,173...35,940,696
JBrowse link
G Ppp3ca protein phosphatase 3 catalytic subunit alpha ISO RGD PMID:15336966 RGD:1579951 NCBI chrNW_004955496:6,934,542...7,059,745
Ensembl chrNW_004955496:6,908,224...7,059,816
JBrowse link
G Ppp3cb protein phosphatase 3 catalytic subunit beta ISO RGD PMID:15336966 RGD:1579951 NCBI chrNW_004955437:18,323,852...18,377,815
Ensembl chrNW_004955437:18,323,857...18,377,815
JBrowse link
G Ppp3cc protein phosphatase 3 catalytic subunit gamma ISO RGD PMID:15336966 RGD:1579951 NCBI chrNW_004955403:45,915,985...45,969,350
Ensembl chrNW_004955403:45,916,002...45,968,185
JBrowse link
G Ppp3r1 protein phosphatase 3 regulatory subunit B, alpha ISO RGD PMID:15336966 RGD:1579951 NCBI chrNW_004955424:16,624,214...16,690,783
Ensembl chrNW_004955424:16,623,917...16,690,783
JBrowse link
G Ppp3r2 protein phosphatase 3 regulatory subunit B, beta ISO RGD PMID:15336966 RGD:1579951 NCBI chrNW_004955419:24,252,772...24,253,730 JBrowse link
G Rcan1 regulator of calcineurin 1 ISO RGD PMID:16415348 RGD:1581652 NCBI chrNW_004955407:33,873,427...33,951,762
Ensembl chrNW_004955407:33,873,383...33,951,498
JBrowse link
calcium signaling pathway via the calcium-sensing receptor term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arrb1 arrestin beta 1 ISO RGD PMID:15637145, PMID:22192592 RGD:7207059, RGD:7207060 NCBI chrNW_004955414:16,478,843...16,568,050
Ensembl chrNW_004955414:16,478,843...16,562,135
JBrowse link
G Arrb2 arrestin beta 2 ISO RGD PMID:15637145, PMID:22192592 RGD:7207059, RGD:7207060 NCBI chrNW_004955467:10,109,985...10,118,687
Ensembl chrNW_004955467:10,110,003...10,123,022
JBrowse link
G Casr calcium sensing receptor ISO RGD PMID:12239094, PMID:15637145, PMID:22192592 RGD:7207059, RGD:7207060, RGD:7207227 NCBI chrNW_004955427:21,486,608...21,574,017
Ensembl chrNW_004955427:21,486,427...21,575,210
JBrowse link
G Flna filamin A ISO RGD PMID:12239094 RGD:7207227 NCBI chrNW_004955580:874,233...895,172
Ensembl chrNW_004955580:874,233...895,232
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 ISO RGD PMID:15637145 RGD:7207060 NCBI chrNW_004955422:18,173,438...18,192,357
Ensembl chrNW_004955422:18,170,616...18,192,412
JBrowse link
G Grk3 G protein-coupled receptor kinase 3 ISO RGD PMID:15637145 RGD:7207060 NCBI chrNW_004955442:19,640,145...19,785,803
Ensembl chrNW_004955442:19,640,145...19,785,803
JBrowse link
G Grk4 G protein-coupled receptor kinase 4 ISO RGD PMID:15637145 RGD:7207060 NCBI chrNW_004955514:1,837,141...1,895,785
Ensembl chrNW_004955514:1,837,141...1,895,785
JBrowse link
G Rgs12 regulator of G protein signaling 12 ISO RGD PMID:12239094 RGD:7207227 NCBI chrNW_004955514:2,081,575...2,154,414
Ensembl chrNW_004955514:2,088,354...2,154,191
JBrowse link
G Rgs2 regulator of G protein signaling 2 ISO RGD PMID:12239094 RGD:7207227 NCBI chrNW_004955406:30,261,757...30,265,389
Ensembl chrNW_004955406:30,261,757...30,266,005
JBrowse link
G Rgs4 regulator of G protein signaling 4 ISO RGD PMID:12239094 RGD:7207227 NCBI chrNW_004955462:13,340,812...13,347,598
Ensembl chrNW_004955462:13,338,960...13,347,610
JBrowse link
G Rgs5 regulator of G protein signaling 5 ISO RGD PMID:21393447 RGD:7207228 NCBI chrNW_004955462:13,228,110...13,288,063
Ensembl chrNW_004955462:13,228,002...13,283,034
JBrowse link
G Rhoa ras homolog family member A ISO RGD PMID:12239094 RGD:7207227 NCBI chrNW_004955532:1,300,821...1,347,453
Ensembl chrNW_004955532:1,300,462...1,347,451
JBrowse link
calcium/calcium-mediated signaling pathway term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 ISO RGD PMID:19789383 RGD:7204695 NCBI chrNW_004955493:6,559,995...6,578,461
Ensembl chrNW_004955493:6,559,995...6,578,461
JBrowse link
G Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 ISO RGD PMID:19789383 RGD:7204695 NCBI chrNW_004955482:7,233,336...7,295,754
Ensembl chrNW_004955482:7,233,336...7,295,754
JBrowse link
G Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 ISO RGD PMID:19789383 RGD:7204695 NCBI chrNW_004955467:12,911,679...12,941,322
Ensembl chrNW_004955467:12,911,679...12,941,924
JBrowse link
G Atp2b1 ATPase plasma membrane Ca2+ transporting 1 ISO RGD PMID:19789383 RGD:7204695 NCBI chrNW_004955405:26,872,379...26,932,270
Ensembl chrNW_004955405:26,872,379...26,932,703
JBrowse link
G Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ISO RGD PMID:19789383 RGD:7204695 NCBI chrNW_004955561:1,727,935...1,851,907
Ensembl chrNW_004955561:1,727,935...1,851,907
JBrowse link
G Atp2b3 ATPase plasma membrane Ca2+ transporting 3 ISO RGD PMID:19789383 RGD:7204695 NCBI chrNW_004955580:286,092...332,657
Ensembl chrNW_004955580:269,100...333,471
JBrowse link
G Atp2b4 ATPase plasma membrane Ca2+ transporting 4 ISO RGD PMID:19789383 RGD:7204695 NCBI chrNW_004955406:39,552,034...39,645,694
Ensembl chrNW_004955406:39,552,019...39,645,694
JBrowse link
G Atp2c1 ATPase secretory pathway Ca2+ transporting 1 ISO RGD PMID:19789383 RGD:7204695 NCBI chrNW_004955501:7,382,657...7,519,789
Ensembl chrNW_004955501:7,383,150...7,519,988
JBrowse link
G Atp2c2 ATPase secretory pathway Ca2+ transporting 2 ISO RGD PMID:19789383 RGD:7204695 NCBI chrNW_004955541:47,803...95,074
Ensembl chrNW_004955541:47,768...94,878
JBrowse link
G Cabp1 calcium binding protein 1 ISO RGD PMID:20668007 RGD:7204681 NCBI chrNW_004955455:11,000,763...11,068,922 JBrowse link
G Cabp2 calcium binding protein 2 ISO RGD PMID:20668007 RGD:7204681 NCBI chrNW_004955422:17,967,313...17,972,468
Ensembl chrNW_004955422:17,967,313...17,972,468
JBrowse link
G Cabp4 calcium binding protein 4 ISO RGD PMID:20668007 RGD:7204681 NCBI chrNW_004955422:18,023,639...18,028,845
Ensembl chrNW_004955422:18,023,639...18,028,845
JBrowse link
G Cacna1a calcium voltage-gated channel subunit alpha1 A ISO RGD PMID:21746798 RGD:7204688 NCBI chrNW_004955415:32,182,536...32,457,511
Ensembl chrNW_004955415:32,183,442...32,400,595
JBrowse link
G Cacna1b calcium voltage-gated channel subunit alpha1 B ISO RGD PMID:21746798 RGD:7204688 NCBI chrNW_004955513:5,654,915...5,823,094
Ensembl chrNW_004955513:5,654,238...5,824,386
JBrowse link
G Cacna1c calcium voltage-gated channel subunit alpha1 C ISO RGD PMID:21746798 RGD:7204688 NCBI chrNW_004955454:4,573,647...5,199,046
Ensembl chrNW_004955454:4,490,923...5,198,506
JBrowse link
G Cacna1d calcium voltage-gated channel subunit alpha1 D ISO RGD PMID:21746798 RGD:7204688 NCBI chrNW_004955430:3,450,151...3,796,983
Ensembl chrNW_004955430:3,268,953...3,794,592
JBrowse link
G Cacna1e calcium voltage-gated channel subunit alpha1 E ISO RGD PMID:21746798 RGD:7204688 NCBI chrNW_004955406:20,356,564...20,824,679
Ensembl chrNW_004955406:20,510,954...20,816,678
JBrowse link
G Cacna1f calcium voltage-gated channel subunit alpha1 F ISO RGD PMID:21746798 RGD:7204688 NCBI chrNW_004955543:692,035...717,364
Ensembl chrNW_004955543:692,035...717,364
JBrowse link
G Cacna1g calcium voltage-gated channel subunit alpha1 G ISO RGD PMID:21746798 RGD:7204688 NCBI chrNW_004955451:11,136,885...11,194,321
Ensembl chrNW_004955451:11,137,214...11,194,036
JBrowse link
G Cacna1h calcium voltage-gated channel subunit alpha1 H ISO RGD PMID:21746798 RGD:7204688 NCBI chrNW_004955442:16,047,965...16,108,862
Ensembl chrNW_004955442:16,045,895...16,108,862
JBrowse link
G Cacna1i calcium voltage-gated channel subunit alpha1 I ISO RGD PMID:21746798 RGD:7204688 NCBI chrNW_004955413:25,440,533...25,538,367
Ensembl chrNW_004955413:25,453,703...25,535,530
JBrowse link
G Cacna1s calcium voltage-gated channel subunit alpha1 S ISO RGD PMID:21746798 RGD:7204688 NCBI chrNW_004955406:37,201,180...37,263,328
Ensembl chrNW_004955406:37,201,180...37,263,371
JBrowse link
G Cacnb1 calcium voltage-gated channel auxiliary subunit beta 1 ISO RGD PMID:21746798 RGD:7204688 NCBI chrNW_004955451:14,041,848...14,059,740
Ensembl chrNW_004955451:14,038,668...14,059,848
JBrowse link
G Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 ISO RGD PMID:21746798 RGD:7204688 NCBI chrNW_004955429:9,642,725...9,966,175
Ensembl chrNW_004955429:9,644,053...9,966,175
JBrowse link
G Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 ISO RGD PMID:21746798 RGD:7204688 NCBI chrNW_004955500:7,676,331...7,685,174
Ensembl chrNW_004955500:7,672,828...7,687,420
JBrowse link
G Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 ISO RGD PMID:21746798 RGD:7204688 NCBI chrNW_004955440:17,364,996...17,497,446 JBrowse link
G Calb1 calbindin 1 ISO RGD PMID:20943758 RGD:7204685 NCBI chrNW_004955417:6,944,300...6,969,341
Ensembl chrNW_004955417:6,942,900...6,969,502
JBrowse link
G Calb2 calbindin 2 ISO RGD PMID:20943758 RGD:7204685 NCBI chrNW_004955484:4,075,103...4,103,509
Ensembl chrNW_004955484:4,075,067...4,103,559
JBrowse link
G Calm1 calmodulin 1 ISO RGD PMID:10884684, PMID:18083096 RGD:7204676, RGD:7204677 NCBI chrNW_004955438:12,842,437...12,854,028
Ensembl chrNW_004955438:12,842,437...12,854,028
JBrowse link
G Calm2 calmodulin 2 ISO RGD PMID:10884684, PMID:18083096 RGD:7204676, RGD:7204677 NCBI chrNW_004955441:13,973,147...13,988,665 JBrowse link
G Calm3 calmodulin 3 ISO RGD PMID:10884684, PMID:18083096 RGD:7204676, RGD:7204677 NCBI chrNW_004955574:672,441...680,924
Ensembl chrNW_004955574:672,300...680,924
JBrowse link
G Calr calreticulin ISO RGD PMID:20356453 RGD:7204686 NCBI chrNW_004955415:31,985,147...31,989,372
Ensembl chrNW_004955415:31,985,147...31,989,372
JBrowse link
G Casq1 calsequestrin 1 ISO RGD PMID:20356453 RGD:7204686 NCBI chrNW_004955468:11,967,678...11,978,836
Ensembl chrNW_004955468:11,967,678...11,978,836
JBrowse link
G Casq2 calsequestrin 2 ISO RGD PMID:20356453 RGD:7204686 NCBI chrNW_004955435:18,941,975...18,996,027
Ensembl chrNW_004955435:18,941,936...18,996,200
JBrowse link
G Cnga1 cyclic nucleotide gated channel subunit alpha 1 ISO RGD PMID:22435804 RGD:7204690 NCBI chrNW_004955443:615,061...649,693
Ensembl chrNW_004955443:639,096...649,606
JBrowse link
G Cnga2 cyclic nucleotide gated channel subunit alpha 2 ISO RGD PMID:22435804 RGD:7204690 NCBI chrNW_004955498:7,250,514...7,257,701
Ensembl chrNW_004955498:7,250,514...7,257,701
JBrowse link
G Cnga3 cyclic nucleotide gated channel subunit alpha 3 ISO RGD PMID:22435804 RGD:7204690 NCBI chrNW_004955470:4,884,054...4,907,151
Ensembl chrNW_004955470:4,884,309...4,906,902
JBrowse link
G Cnga4 cyclic nucleotide gated channel subunit alpha 4 ISO RGD PMID:22435804 RGD:7204690 NCBI chrNW_004955414:21,977,996...21,986,349
Ensembl chrNW_004955414:21,977,996...21,986,441
JBrowse link
G Cngb1 cyclic nucleotide gated channel subunit beta 1 ISO RGD PMID:22435804 RGD:7204690 NCBI chrNW_004955433:15,467,042...15,556,471 JBrowse link
G Cngb3 cyclic nucleotide gated channel subunit beta 3 ISO RGD PMID:22435804 RGD:7204690 NCBI chrNW_004955417:4,164,328...4,288,516
Ensembl chrNW_004955417:4,168,766...4,300,437
JBrowse link
G Guca1b guanylate cyclase activator 1B ISO RGD PMID:20668007 RGD:7204681 NCBI chrNW_004955437:8,384,692...8,390,946
Ensembl chrNW_004955437:8,382,299...8,390,946
JBrowse link
G Guca2b guanylate cyclase activator 2B ISO RGD PMID:20668007 RGD:7204681 NCBI chrNW_004955537:1,798,249...1,801,673
Ensembl chrNW_004955537:1,798,249...1,801,673
JBrowse link
G Itpr2 inositol 1,4,5-trisphosphate receptor type 2 ISO RGD PMID:19133301 RGD:7204693 NCBI chrNW_004955413:21,289,673...21,719,610
Ensembl chrNW_004955413:21,291,110...21,719,303
JBrowse link
G Itpr3 inositol 1,4,5-trisphosphate receptor type 3 ISO RGD PMID:19133301 RGD:7204693 NCBI chrNW_004955437:2,055,782...2,106,709
Ensembl chrNW_004955437:2,055,805...2,106,076
JBrowse link
G Kcnip1 potassium voltage-gated channel interacting protein 1 ISO RGD PMID:20668007 RGD:7204681 NCBI chrNW_004955408:23,299,192...23,662,395
Ensembl chrNW_004955408:23,437,358...23,662,533
JBrowse link
G Kcnip2 potassium voltage-gated channel interacting protein 2 ISO RGD PMID:20668007 RGD:7204681 NCBI chrNW_004955485:8,468,117...8,472,220
Ensembl chrNW_004955485:8,467,207...8,470,950
JBrowse link
G Kcnip3 potassium voltage-gated channel interacting protein 3 ISO RGD PMID:20668007 RGD:7204681 NCBI chrNW_004955470:3,545,434...3,613,288
Ensembl chrNW_004955470:3,545,172...3,613,296
JBrowse link
G Kcnip4 potassium voltage-gated channel interacting protein 4 ISO RGD PMID:20668007 RGD:7204681 NCBI chrNW_004955480:2,803,374...3,911,081
Ensembl chrNW_004955480:2,803,482...3,909,709
JBrowse link
G Kcnn1 potassium calcium-activated channel subfamily N member 1 ISO RGD PMID:21942705 RGD:7204683 NCBI chrNW_004955524:3,323,188...3,344,321
Ensembl chrNW_004955524:3,322,551...3,344,346
JBrowse link
G Kcnn2 potassium calcium-activated channel subfamily N member 2 ISO RGD PMID:21942705 RGD:7204683 NCBI chrNW_004955408:34,223,523...34,366,191
Ensembl chrNW_004955408:34,109,334...34,368,114
JBrowse link
G Kcnn3 potassium calcium-activated channel subfamily N member 3 ISO RGD PMID:21942705 RGD:7204683 NCBI chrNW_004955545:1,212,240...1,374,189
Ensembl chrNW_004955545:1,216,650...1,374,270
JBrowse link
G Kcnn4 potassium calcium-activated channel subfamily N member 4 ISO RGD PMID:21942705 RGD:7204683 NCBI chrNW_004955555:1,493,600...1,509,113
Ensembl chrNW_004955555:1,490,052...1,509,113
JBrowse link
G Mcoln1 mucolipin 1 ISO RGD PMID:20716668 RGD:7204689 NCBI chrNW_004955563:1,703,408...1,712,908
Ensembl chrNW_004955563:1,703,416...1,745,996
JBrowse link
G Mcu mitochondrial calcium uniporter ISO RGD PMID:22850819 RGD:7204696 NCBI chrNW_004955437:18,750,779...18,800,149
Ensembl chrNW_004955437:18,752,584...18,936,507
JBrowse link
G Ncs1 neuronal calcium sensor 1 ISO RGD PMID:20668007 RGD:7204681 NCBI chrNW_004955513:268,979...289,385 JBrowse link
G Ocm oncomodulin ISO RGD PMID:20943758 RGD:7204685 NCBI chrNW_004955460:13,876,279...13,880,643 JBrowse link
G Orai1 ORAI calcium release-activated calcium modulator 1 ISO RGD PMID:22914293 RGD:7204692 NCBI chrNW_004955482:6,731,949...6,746,095
Ensembl chrNW_004955482:6,731,949...6,775,545
JBrowse link
G Orai2 ORAI calcium release-activated calcium modulator 2 ISO RGD PMID:22914293 RGD:7204692 NCBI chrNW_004955456:15,170,424...15,180,763
Ensembl chrNW_004955456:15,170,424...15,180,763
JBrowse link
G Orai3 ORAI calcium release-activated calcium modulator 3 ISO RGD PMID:22914293 RGD:7204692 NCBI chrNW_004955493:7,799,738...7,806,590
Ensembl chrNW_004955493:7,799,738...7,806,590
JBrowse link
G Pvalb parvalbumin ISO RGD PMID:20943758 RGD:7204685 NCBI chrNW_004955413:23,329,467...23,345,487
Ensembl chrNW_004955413:23,329,467...23,345,487
JBrowse link
G Rcvrn recoverin ISO RGD PMID:20668007 RGD:7204681 NCBI chrNW_004955467:7,220,237...7,236,450
Ensembl chrNW_004955467:7,220,237...7,236,450
JBrowse link
G Ryr1 ryanodine receptor 1 ISO RGD PMID:20961976 RGD:7204694 NCBI chrNW_004955468:879,807...1,000,118
Ensembl chrNW_004955468:879,951...1,000,036
JBrowse link
G Ryr2 ryanodine receptor 2 ISO RGD PMID:20961976 RGD:7204694 NCBI chrNW_004955492:2,647,597...3,275,512
Ensembl chrNW_004955492:2,648,956...3,076,509
JBrowse link
G Ryr3 ryanodine receptor 3 ISO RGD PMID:20961976 RGD:7204694 NCBI chrNW_004955416:712,506...1,260,111
Ensembl chrNW_004955416:713,373...1,259,885
JBrowse link
G S100a1 S100 calcium binding protein A1 ISO RGD PMID:16129693, PMID:17964289 RGD:1579960, RGD:7204682 NCBI chrNW_004955545:276,868...281,015
Ensembl chrNW_004955545:276,868...281,015
JBrowse link
G S100a4 S100 calcium binding protein A4 ISO RGD PMID:17964289 RGD:7204682 NCBI chrNW_004955545:192,236...194,468
Ensembl chrNW_004955545:192,116...195,394
JBrowse link
G S100b S100 calcium binding protein B ISO RGD PMID:17964289 RGD:7204682 NCBI chrNW_004955407:42,972,584...42,980,510
Ensembl chrNW_004955407:42,972,584...42,980,510
JBrowse link
G S100g S100 calcium binding protein G ISO RGD PMID:20943758 RGD:7204685 NCBI chrNW_004955519:1,623,695...1,625,164
Ensembl chrNW_004955519:1,622,522...1,625,164
JBrowse link
G Slc24a1 solute carrier family 24 member 1 ISO RGD PMID:17716241 RGD:7204698 NCBI chrNW_004955450:9,850,170...9,881,172
Ensembl chrNW_004955450:9,856,718...9,881,172
JBrowse link
G Slc24a2 solute carrier family 24 member 2 ISO RGD PMID:17716241 RGD:7204698 NCBI chrNW_004955434:21,871,319...22,091,125
Ensembl chrNW_004955434:21,873,091...22,091,177
JBrowse link
G Slc24a3 solute carrier family 24 member 3 ISO RGD PMID:17716241 RGD:7204698 NCBI chrNW_004955415:27,477,801...27,930,108
Ensembl chrNW_004955415:27,477,819...27,928,383
JBrowse link
G Slc24a4 solute carrier family 24 member 4 ISO RGD PMID:17716241 RGD:7204698 NCBI chrNW_004955438:14,609,779...14,765,516
Ensembl chrNW_004955438:14,609,424...14,759,673
JBrowse link
G Slc24a5 solute carrier family 24 member 5 ISO RGD PMID:17716241 RGD:7204698 NCBI chrNW_004955409:5,747,624...5,768,122
Ensembl chrNW_004955409:5,747,624...5,768,122
JBrowse link
G Slc8a1 solute carrier family 8 member A1 ISO RGD PMID:17716241 RGD:7204698 NCBI chrNW_004955441:7,653,107...8,037,784
Ensembl chrNW_004955441:7,656,031...7,957,640
JBrowse link
G Slc8a2 solute carrier family 8 member A2 ISO RGD PMID:17716241 RGD:7204698 NCBI chrNW_004955574:1,290,907...1,315,399
Ensembl chrNW_004955574:1,288,952...1,315,401
JBrowse link
G Slc8a3 solute carrier family 8 member A3 ISO RGD PMID:17716241 RGD:7204698 NCBI chrNW_004955466:220,346...359,627
Ensembl chrNW_004955466:220,099...360,851
JBrowse link
G Slc8b1 solute carrier family 8 member B1 ISO RGD PMID:22850819 RGD:7204696 NCBI chrNW_004955482:9,594,872...9,617,136
Ensembl chrNW_004955482:9,595,604...9,605,271
JBrowse link
G Stim1 stromal interaction molecule 1 ISO RGD PMID:22914293 RGD:7204692 NCBI chrNW_004955414:19,652,990...19,849,353
Ensembl chrNW_004955414:19,652,990...19,847,964
JBrowse link
G Stim2 stromal interaction molecule 2 ISO RGD PMID:22914293 RGD:7204692 NCBI chrNW_004955443:18,281,245...18,424,750
Ensembl chrNW_004955443:18,278,464...18,366,522
JBrowse link
G Syt1 synaptotagmin 1 ISO RGD PMID:11751925, PMID:15534041 RGD:2311146, RGD:7204679 NCBI chrNW_004955405:17,840,012...18,372,156
Ensembl chrNW_004955405:17,839,884...18,372,566
JBrowse link
G Syt7 synaptotagmin 7 ISO RGD PMID:15534041, PMID:18713958 RGD:2311148, RGD:7204679 NCBI chrNW_004955511:6,051,392...6,093,651
Ensembl chrNW_004955511:6,051,386...6,093,651
JBrowse link
G Syt9 synaptotagmin 9 ISO RGD PMID:11751925, PMID:18713958 RGD:2311146, RGD:2311148 NCBI chrNW_004955414:23,061,163...23,221,986
Ensembl chrNW_004955414:23,061,163...23,221,962
JBrowse link
G Tnnc1 troponin C1, slow skeletal and cardiac type ISO RGD PMID:17964289 RGD:7204682 NCBI chrNW_004955430:2,438,644...2,441,596
Ensembl chrNW_004955430:2,434,874...2,441,596
JBrowse link
G Tnnc2 troponin C2, fast skeletal type ISO RGD PMID:17964289 RGD:7204682 NCBI chrNW_004955445:11,466,579...11,469,123
Ensembl chrNW_004955445:11,466,579...11,469,123
JBrowse link
G Tpcn1 two pore segment channel 1 ISO RGD PMID:20018950 RGD:7204697 NCBI chrNW_004955482:9,538,572...9,594,739
Ensembl chrNW_004955482:9,542,079...9,592,972
JBrowse link
G Tpcn2 two pore segment channel 2 ISO RGD PMID:20018950 RGD:7204697 NCBI chrNW_004955422:16,899,730...16,923,962 JBrowse link
G Trpv6 transient receptor potential cation channel subfamily V member 6 ISO RGD PMID:20716668 RGD:7204689 NCBI chrNW_004955494:820,801...835,931
Ensembl chrNW_004955494:818,643...836,126