classic metabolic pathway - Ontology Report

PMID:126256 PMID:4008917 PMID:6854006 PMID:334962

rostral-caudal differences in Ache and Chat enzyme activities in the superior colliculus
activities of Ache and Chat varied considerably between different layers of the cerebellar vermis

RGD

RGD:2301195, RGD:2301203, RGD:2301199, RGD:2301197

NCBI chr12:19,406,133...19,413,713
Ensembl chr12:19,407,360...19,413,651

Chat

choline O-acetyltransferase

PMID:126256 PMID:4008917 PMID:6854006 PMID:334962

rostral-caudal differences in Ache and Chat enzyme activities in the superior colliculus
activities of Ache and Chat varied considerably between different layers of the cerebellar vermis

RGD

RGD:2301195, RGD:2301203, RGD:2301199, RGD:2301197

NCBI chr16:7,657,362...7,717,093
Ensembl chr16:7,657,362...7,717,093

ADP-ribosylation pathway, cyclic ribosylation

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Bst1

bone marrow stromal cell antigen 1

RGD

PMID:23576305

RGD:11250406

NCBI chr14:67,253,706...67,270,203
Ensembl chr14:67,252,998...67,270,180

CD38 molecule

RGD

NCBI chr14:67,172,062...67,212,328
Ensembl chr14:67,172,063...67,211,986

ADP-ribosylation pathway, mono and poly-ribosylation

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Aplf

aprataxin and PNKP like factor

RGD

NCBI chr 4:120,070,471...120,122,656
Ensembl chr 4:120,070,471...120,122,633

Chfr

checkpoint with forkhead and ring finger domains

RGD

NCBI chr12:46,504,497...46,538,104
Ensembl chr12:46,504,497...46,538,014

Macrod1

mono-ADP ribosylhydrolase 1

RGD

NCBI chr 1:204,246,238...204,387,027
Ensembl chr 1:204,246,166...204,389,716

Macrod2

mono-ADP ribosylhydrolase 2

RGD

NCBI chr 3:127,720,066...129,737,511
Ensembl chr 3:127,720,181...129,734,492

Oard1

O-acyl-ADP-ribose deacylase 1

RGD

NCBI chr 9:12,576,894...12,587,264
Ensembl chr 9:12,578,970...12,587,249

Parg

poly (ADP-ribose) glycohydrolase

RGD

NCBI chr16:7,436,429...7,544,276
Ensembl chr16:7,436,476...7,544,273

Parp1

poly (ADP-ribose) polymerase 1

RGD

NCBI chr13:92,307,593...92,339,406
Ensembl chr13:92,307,586...92,339,404

Parp10

poly (ADP-ribose) polymerase family, member 10

RGD

NCBI chr 7:107,949,031...107,958,377
Ensembl chr 7:107,949,043...107,958,304

Parp11

poly (ADP-ribose) polymerase family, member 11

RGD

NCBI chr 4:160,298,040...160,344,369
Ensembl chr 4:160,304,905...160,341,946

Parp12

poly (ADP-ribose) polymerase family, member 12

RGD

NCBI chr 4:67,826,548...67,885,356
Ensembl chr 4:67,839,237...67,883,685

Parp14

poly (ADP-ribose) polymerase family, member 14

RGD

NCBI chr11:64,902,848...64,934,916
Ensembl chr11:64,902,785...64,934,916

Parp16

poly (ADP-ribose) polymerase family, member 16

RGD

NCBI chr 8:65,731,152...65,749,438
Ensembl chr 8:65,727,706...65,749,433

Parp2

poly (ADP-ribose) polymerase 2

RGD

NCBI chr15:24,034,069...24,044,340
Ensembl chr15:24,034,106...24,044,338

Parp3

poly (ADP-ribose) polymerase family, member 3

RGD

NCBI chr 8:107,111,010...107,117,073
Ensembl chr 8:107,111,012...107,116,782

Parp4

poly (ADP-ribose) polymerase family, member 4

RGD

NCBI chr15:30,690,503...30,792,868
Ensembl chr15:30,686,613...30,828,810

Parp6

poly (ADP-ribose) polymerase family, member 6

RGD

NCBI chr 8:60,016,594...60,049,108
Ensembl chr 8:60,016,877...60,049,108

Parp8

poly (ADP-ribose) polymerase family, member 8

RGD

NCBI chr 2:48,679,405...48,848,700
Ensembl chr 2:48,679,436...48,849,253

Parp9

poly (ADP-ribose) polymerase family, member 9

RGD

NCBI chr11:64,780,977...64,814,995
Ensembl chr11:64,780,981...64,815,455

Rnf146

ring finger protein 146

RGD

NCBI chr 1:28,458,864...28,475,758
Ensembl chr 1:28,458,887...28,475,923

Tiparp

TCDD-inducible poly(ADP-ribose) polymerase

RGD

NCBI chr 2:149,753,682...149,780,327
Ensembl chr 2:149,753,682...149,780,327

tankyrase

RGD

NCBI chr16:57,223,174...57,370,740
Ensembl chr16:57,225,094...57,366,260

tankyrase 2

RGD

NCBI chr 1:234,567,888...234,621,079
Ensembl chr 1:234,567,858...234,621,079

Zc3hav1

zinc finger CCCH-type containing, antiviral 1

RGD

NCBI chr 4:67,012,129...67,062,428
Ensembl chr 4:67,012,185...67,062,428

alanine metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Aars1

alanyl-tRNA synthetase 1

SMP:00055

NCBI chr19:38,999,130...39,021,152
Ensembl chr19:38,999,163...39,021,147

Aars2

alanyl-tRNA synthetase 2, mitochondrial

SMP:00055

NCBI chr 9:15,484,639...15,496,116
Ensembl chr 9:15,297,531...15,496,090

Agxt

alanine--glyoxylate aminotransferase

SMP:00055

NCBI chr 9:93,675,384...93,685,337
Ensembl chr 9:93,675,384...93,685,336

Gpt

glutamic--pyruvic transaminase

SMP:00055

NCBI chr 7:108,416,646...108,419,495
Ensembl chr 7:108,416,642...108,419,494

pyruvate carboxylase

SMP:00055

NCBI chr 1:201,799,374...201,898,412
Ensembl chr 1:201,804,267...201,898,380

alanine, aspartate and glutamate metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Abat

4-aminobutyrate aminotransferase

rno:00250

NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835

Acy3

aminoacylase 3

rno:00250

NCBI chr 1:201,279,751...201,285,803
Ensembl chr 1:201,279,851...201,283,175

Adsl

adenylosuccinate lyase

rno:00250

NCBI chr 7:112,479,256...112,503,439
Ensembl chr 7:112,479,271...112,503,760

Adss2

adenylosuccinate synthase 2

rno:00250

NCBI chr13:89,769,240...89,799,577
Ensembl chr13:89,769,244...89,799,604

Agxt

alanine--glyoxylate aminotransferase

rno:00250

NCBI chr 9:93,675,384...93,685,337
Ensembl chr 9:93,675,384...93,685,336

Agxt2

alanine-glyoxylate aminotransferase 2

rno:00250

NCBI chr 2:59,336,252...59,377,664
Ensembl chr 2:59,336,283...59,377,926

Aldh4a1

aldehyde dehydrogenase 4 family, member A1

rno:00250

NCBI chr 5:151,880,002...151,905,491
Ensembl chr 5:151,830,701...151,925,345

Aldh5a1

aldehyde dehydrogenase 5 family, member A1

rno:00250

NCBI chr17:40,132,339...40,158,677
Ensembl chr17:40,130,883...40,158,677

Asl

argininosuccinate lyase

rno:00250

NCBI chr12:26,659,664...26,677,136
Ensembl chr12:26,659,565...26,679,662

Asns

asparagine synthetase (glutamine-hydrolyzing)

rno:00250

NCBI chr 4:35,784,995...35,803,474
Ensembl chr 4:35,785,237...35,803,423

Aspa

aspartoacylase

rno:00250

NCBI chr10:57,891,704...57,945,267
Ensembl chr10:57,892,104...57,945,272

Ass1

argininosuccinate synthase 1

rno:00250

NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903

Cad

carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase

rno:00250

NCBI chr 6:25,292,133...25,315,078
Ensembl chr 6:25,292,133...25,319,861

Cps1

carbamoyl-phosphate synthase 1

rno:00250

NCBI chr 9:68,614,153...68,737,037
Ensembl chr 9:68,614,153...68,737,033

Ddo

D-aspartate oxidase

rno:00250

NCBI chr20:44,090,823...44,109,962
Ensembl chr20:44,090,914...44,133,095

Gad1

glutamate decarboxylase 1

rno:00250

NCBI chr 3:55,369,704...55,410,335
Ensembl chr 3:55,369,704...55,410,333

Gad2

glutamate decarboxylase 2

rno:00250

NCBI chr17:84,763,630...84,826,155
Ensembl chr17:84,763,628...84,826,155

Gfpt1

glutamine fructose-6-phosphate transaminase 1

rno:00250

NCBI chr 4:119,496,691...119,546,472
Ensembl chr 4:119,496,714...119,546,471

Gfpt2

glutamine-fructose-6-phosphate transaminase 2

rno:00250

NCBI chr10:34,115,005...34,161,329
Ensembl chr10:34,115,052...34,161,329

Gls

glutaminase

rno:00250

NCBI chr 9:49,344,616...49,416,900
Ensembl chr 9:49,344,781...49,416,900

Gls2

glutaminase 2

rno:00250

NCBI chr 7:617,252...633,424
Ensembl chr 7:617,288...633,426

Glud1

glutamate dehydrogenase 1

rno:00250

NCBI chr16:9,640,312...9,673,961
Ensembl chr16:9,640,312...9,673,957

Glul

glutamate-ammonia ligase

rno:00250

NCBI chr13:65,969,053...66,035,121
Ensembl chr13:66,025,630...66,035,108

glutamic-oxaloacetic transaminase 1

rno:00250

NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633

Got2

glutamic-oxaloacetic transaminase 2

rno:00250

NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994

Gpt

glutamic--pyruvic transaminase

rno:00250

NCBI chr 7:108,416,646...108,419,495
Ensembl chr 7:108,416,642...108,419,494

Gpt2

glutamic--pyruvic transaminase 2

rno:00250

NCBI chr19:21,526,800...21,561,314
Ensembl chr19:21,517,621...21,560,610

Lao1

L-amino acid oxidase 1

rno:00250

NCBI chr 5:132,573,698...132,583,591
Ensembl chr 5:132,573,698...132,583,582

Nit2

nitrilase family, member 2

rno:00250

NCBI chr11:43,363,839...43,378,713
Ensembl chr11:43,363,985...43,375,024

Ppat

phosphoribosyl pyrophosphate amidotransferase

rno:00250

NCBI chr14:31,215,741...31,250,144
Ensembl chr14:31,216,165...31,250,144

aldosterone biosynthetic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cyp11a1

cytochrome P450, family 11, subfamily a, polypeptide 1

RGD

NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338

Cyp11b1

cytochrome P450, family 11, subfamily b, polypeptide 1

RGD

NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278

Cyp11b2

cytochrome P450, family 11, subfamily b, polypeptide 2

RGD

NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004

Cyp21a1

cytochrome P450, family 21, subfamily a, polypeptide 1

RGD

NCBI chr20:4,020,217...4,026,923
Ensembl chr20:4,023,767...4,026,923

ferredoxin 1

RGD

NCBI chr 8:52,268,536...52,287,344
Ensembl chr 8:52,268,536...52,287,414

ferredoxin reductase

RGD

NCBI chr10:100,507,863...100,516,649
Ensembl chr10:100,507,865...100,516,658

Por

cytochrome p450 oxidoreductase

RGD

NCBI chr12:20,951,058...20,999,198
Ensembl chr12:20,951,058...20,999,245

Star

steroidogenic acute regulatory protein

RGD

PMID:18821018

RGD:2325883

NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672

alpha-linolenic acid metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Acox1

acyl-CoA oxidase 1

rno:00592

NCBI chr10:101,406,197...101,431,252
Ensembl chr10:101,406,197...101,431,232

Acox3

acyl-CoA oxidase 3, pristanoyl

rno:00592

NCBI chr14:75,133,986...75,176,767
Ensembl chr14:75,094,676...75,176,205

Elovl4

ELOVL fatty acid elongase 4

SMP:00018

NCBI chr 8:84,702,916...84,729,466
Ensembl chr 8:84,702,362...84,729,697

Elovl5

ELOVL fatty acid elongase 5

SMP:00018

NCBI chr 8:78,790,846...78,857,307
Ensembl chr 8:78,790,846...78,857,284

Fads1

fatty acid desaturase 1

SMP:00018

NCBI chr 1:206,827,724...206,842,734
Ensembl chr 1:206,827,765...206,842,734

Fads2

fatty acid desaturase 2

SMP:00018 rno:00592

NCBI chr 1:206,707,384...206,747,333
Ensembl chr 1:206,708,783...206,748,789

Pla2g10

phospholipase A2, group X

rno:00592

NCBI chr10:1,597,761...1,610,822
Ensembl chr10:1,597,761...1,609,000

Pla2g12a

phospholipase A2, group XIIA

rno:00592

NCBI chr 2:218,436,497...218,452,742
Ensembl chr 2:218,436,513...218,452,740

Pla2g12b

phospholipase A2, group XIIB

rno:00592

NCBI chr20:27,369,196...27,389,517
Ensembl chr20:27,370,266...27,388,743

Pla2g1b

phospholipase A2 group IB

rno:00592

NCBI chr12:41,142,193...41,151,967
Ensembl chr12:41,142,200...41,153,226

Pla2g2a

phospholipase A2 group IIA

rno:00592

NCBI chr 5:151,076,442...151,079,019
Ensembl chr 5:151,076,442...151,079,014

Pla2g2c

phospholipase A2, group IIC

rno:00592

NCBI chr 5:150,959,365...150,981,388
Ensembl chr 5:150,959,182...150,981,377

Pla2g2d

phospholipase A2, group IID

rno:00592

NCBI chr 5:151,016,010...151,022,531
Ensembl chr 5:151,018,870...151,022,525

Pla2g2f

phospholipase A2, group IIF

rno:00592

NCBI chr 5:150,986,788...150,993,175
Ensembl chr 5:150,986,788...150,993,175

Pla2g3

phospholipase A2, group III

rno:00592

NCBI chr14:78,367,625...78,373,913
Ensembl chr14:78,368,105...78,373,913

Pla2g4a

phospholipase A2 group 4A

rno:00592

NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266

Pla2g4b

phospholipase A2 group IVB

SMP:00018 rno:00592

NCBI chr 3:107,004,238...107,013,853
Ensembl chr 3:107,005,489...107,013,853

Pla2g4e

phospholipase A2, group IVE

rno:00592

NCBI chr 3:107,132,540...107,198,609
Ensembl chr 3:107,132,541...107,198,233

Pla2g4f

phospholipase A2, group IVF

rno:00592

NCBI chr 3:107,249,053...107,266,201
Ensembl chr 3:107,250,075...107,264,689

Pla2g5

phospholipase A2, group V

rno:00592

NCBI chr 5:151,041,339...151,109,433
Ensembl chr 5:151,041,340...151,062,658

Pla2g6

phospholipase A2 group VI

rno:00592

NCBI chr 7:110,851,378...110,891,557
Ensembl chr 7:110,851,378...110,891,114

Plb1

phospholipase B1

rno:00592

NCBI chr 6:24,087,051...24,227,167
Ensembl chr 6:24,089,214...24,210,117

altered citric acid cycle pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

fumarate hydratase

RGD

PMID:17211469

RGD:6907135

NCBI chr13:87,524,331...87,550,215
Ensembl chr13:87,524,337...87,550,266

Sdhb

succinate dehydrogenase complex iron sulfur subunit B

RGD

PMID:21771581

RGD:6907134

NCBI chr 5:153,264,906...153,285,570
Ensembl chr 5:153,264,899...153,314,293

Sdhd

succinate dehydrogenase complex subunit D

RGD

PMID:21771581

RGD:6907134

NCBI chr 8:50,944,702...50,954,298
Ensembl chr 8:50,944,704...50,954,238

altered folate cycle metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Aldh1l1

aldehyde dehydrogenase 1 family, member L1

RGD

NCBI chr 4:123,059,989...123,106,471
Ensembl chr 4:123,060,008...123,106,465

Dhfr

dihydrofolate reductase

RGD

NCBI chr 2:23,585,876...23,611,199
Ensembl chr 2:23,586,031...23,613,713

Folr1

folate receptor alpha

RGD

NCBI chr 1:156,219,460...156,238,436
Ensembl chr 1:156,219,460...156,230,667

Mthfd1

methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1

RGD

NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372

Mthfr

methylenetetrahydrofolate reductase

RGD

NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797

5-methyltetrahydrofolate-homocysteine methyltransferase

PMID:22108709 PMID:22108709

RGD

RGD:7242557, RGD:7242557

NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822

Mtrr

5-methyltetrahydrofolate-homocysteine methyltransferase reductase

RGD

NCBI chr 1:34,866,991...34,899,425
Ensembl chr 1:34,867,089...34,899,425

Slc46a1

solute carrier family 46 member 1

RGD

NCBI chr10:63,361,504...63,367,940
Ensembl chr10:63,361,486...63,368,848

altered folate mediated one-carbon metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Mthfd1

methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1

RGD

NCBI chr 6:94,977,862...95,045,375
Ensembl chr 6:94,977,862...95,045,372

Mthfr

methylenetetrahydrofolate reductase

RGD

NCBI chr 5:158,465,248...158,484,999
Ensembl chr 5:158,465,296...158,483,797

5-methyltetrahydrofolate-homocysteine methyltransferase

RGD

NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822

altered galactose metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Akr1b1

aldo-keto reductase family 1 member B1

ISS

RGD

PMID:9215310

RGD:734542

NCBI chr 4:62,932,033...62,946,126
Ensembl chr 4:62,932,031...62,946,157

G6pc1

glucose-6-phosphatase catalytic subunit 1

IEP

RGD

PMID:8865366

RGD:728661

NCBI chr10:86,307,400...86,318,766
Ensembl chr10:86,257,668...86,333,804

hexokinase 2

RGD

NCBI chr 4:115,234,509...115,283,530
Ensembl chr 4:115,234,509...115,283,530

altered lipoprotein metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

apolipoprotein A1

RGD

NCBI chr 8:46,527,251...46,529,035
Ensembl chr 8:46,527,144...46,529,035

apolipoprotein A4

RGD

NCBI chr 8:46,539,083...46,541,464
Ensembl chr 8:46,539,082...46,541,469

apolipoprotein B

RGD

NCBI chr 6:30,844,386...30,883,983
Ensembl chr 6:30,844,368...30,892,497

apolipoprotein C1

RGD

NCBI chr 1:79,347,057...79,350,340
Ensembl chr 1:79,346,136...79,350,375

apolipoprotein C2

RGD

NCBI chr 1:79,329,429...79,334,397
Ensembl chr 1:79,329,428...79,334,476

apolipoprotein C3

RGD

NCBI chr 8:46,531,478...46,533,658
Ensembl chr 8:46,531,478...46,533,583

apolipoprotein E

RGD

NCBI chr 1:79,353,924...79,357,852
Ensembl chr 1:79,353,916...79,357,932

altered retinoid cycle metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Abca4

ATP binding cassette subfamily A member 4

RGD

NCBI chr 2:210,164,813...210,302,069
Ensembl chr 2:210,164,813...210,302,069

Lrat

lecithin retinol acyltransferase

RGD

NCBI chr 2:168,264,093...168,273,155
Ensembl chr 2:168,266,877...168,273,619

Rbp3

retinol binding protein 3

RGD

NCBI chr16:9,267,538...9,276,006
Ensembl chr16:9,267,538...9,276,006

Rdh12

retinol dehydrogenase 12

RGD

NCBI chr 6:98,015,465...98,028,388
Ensembl chr 6:98,015,465...98,028,388

Rlbp1

retinaldehyde binding protein 1

RGD

NCBI chr 1:133,308,920...133,322,296
Ensembl chr 1:133,308,938...133,322,296

Rpe65

retinoid isomerohydrolase RPE65

RGD

NCBI chr 2:248,766,497...248,798,403
Ensembl chr 2:248,766,612...248,798,403

altered reverse cholesterol transport pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Abca1

ATP binding cassette subfamily A member 1

RGD

PMID:11086027

RGD:1600951

NCBI chr 5:67,678,267...67,801,162
Ensembl chr 5:67,681,297...67,801,170

amino sugar metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Amdhd2

amidohydrolase domain containing 2

SMP:00045 rno:00520

NCBI chr10:13,187,579...13,196,148
Ensembl chr10:13,187,578...13,196,095

Chi3l1

chitinase 3 like 1

rno:00520

NCBI chr13:45,641,802...45,649,787
Ensembl chr13:45,641,802...45,649,787

Chia

chitinase, acidic

rno:00520

NCBI chr 2:193,614,374...193,656,532
Ensembl chr 2:193,614,114...193,656,533

Chit1

chitinase 1

SMP:00045 rno:00520

NCBI chr13:45,565,841...45,613,593
Ensembl chr13:45,593,845...45,613,592

Cmah

cytidine monophospho-N-acetylneuraminic acid hydroxylase

rno:00520

NCBI chr17:40,557,161...40,642,350
Ensembl chr17:40,583,667...40,642,275

Cmas

cytidine monophosphate N-acetylneuraminic acid synthetase

SMP:00045 rno:00520

NCBI chr 4:175,718,808...175,737,128
Ensembl chr 4:175,718,808...175,737,125

Cyb5r1

cytochrome b5 reductase 1

rno:00520

NCBI chr13:45,849,017...45,855,458
Ensembl chr13:45,849,091...45,855,458

Cyb5r2

cytochrome b5 reductase 2

rno:00520

NCBI chr 1:161,655,862...161,664,359
Ensembl chr 1:161,655,864...161,664,097

Cyb5r3

cytochrome b5 reductase 3

rno:00520

NCBI chr 7:114,306,686...114,324,247
Ensembl chr 7:114,306,685...114,324,298

Fcsk

fucose kinase

rno:00520

NCBI chr19:38,849,130...38,874,497
Ensembl chr19:38,854,762...38,874,418

Fpgt

fucose-1-phosphate guanylyltransferase

rno:00520

NCBI chr 2:244,099,031...244,119,967
Ensembl chr 2:244,099,076...244,119,899

Gale

UDP-galactose-4-epimerase

rno:00520

NCBI chr 5:148,193,886...148,198,392
Ensembl chr 5:148,194,791...148,198,388

Galk1

galactokinase 1

rno:00520

NCBI chr10:101,243,146...101,247,323
Ensembl chr10:101,235,994...101,247,337

Galk2

galactokinase 2

rno:00520

NCBI chr 3:113,110,057...113,243,014
Ensembl chr 3:113,110,030...113,233,306

Galt

galactose-1-phosphate uridylyltransferase

rno:00520

NCBI chr 5:56,927,039...56,930,284
Ensembl chr 5:56,926,724...56,930,265

Gck

glucokinase

rno:00520

NCBI chr14:80,785,060...80,829,842
Ensembl chr14:80,785,060...80,826,995

Gfpt1

glutamine fructose-6-phosphate transaminase 1

SMP:00045 rno:00520

NCBI chr 4:119,496,691...119,546,472
Ensembl chr 4:119,496,714...119,546,471

Gfpt2

glutamine-fructose-6-phosphate transaminase 2

rno:00520

NCBI chr10:34,115,005...34,161,329
Ensembl chr10:34,115,052...34,161,329

Gfus

GDP-L-fucose synthase

rno:00520

NCBI chr 7:107,612,087...107,617,005
Ensembl chr 7:107,612,094...107,616,948

Gmds

GDP-mannose 4, 6-dehydratase

rno:00520

NCBI chr17:32,095,315...32,621,975
Ensembl chr17:32,095,386...32,621,961

Gmppa

GDP-mannose pyrophosphorylase A

rno:00520

NCBI chr 9:76,926,724...76,934,274
Ensembl chr 9:76,926,739...76,934,269

Gmppb

GDP-mannose pyrophosphorylase B

rno:00520

NCBI chr 8:108,737,429...108,740,437
Ensembl chr 8:108,693,060...108,767,286

Gne

glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase

SMP:00045 rno:00520

NCBI chr 5:58,267,189...58,307,396
Ensembl chr 5:58,267,210...58,307,499

Gnpda1

glucosamine-6-phosphate deaminase 1

SMP:00045 rno:00520

NCBI chr18:30,165,435...30,177,462
Ensembl chr18:30,165,427...30,177,486

Gnpda2

glucosamine-6-phosphate deaminase 2

rno:00520

NCBI chr14:38,520,663...38,538,713
Ensembl chr14:38,520,705...38,538,713

Gnpnat1

glucosamine-phosphate N-acetyltransferase 1

SMP:00045 rno:00520

NCBI chr15:18,596,180...18,608,854
Ensembl chr15:18,596,442...18,608,739

Gpi

glucose-6-phosphate isomerase

rno:00520

NCBI chr 1:86,828,211...86,856,077
Ensembl chr 1:86,828,216...86,856,086

Hexa

hexosaminidase subunit alpha

SMP:00045 rno:00520

NCBI chr 8:59,936,526...59,961,654
Ensembl chr 8:59,936,660...59,962,013

Hexb

hexosaminidase subunit beta

rno:00520

NCBI chr 2:28,483,997...28,504,165
Ensembl chr 2:28,484,012...28,504,223

Hk1

hexokinase 1

SMP:00045 rno:00520

NCBI chr20:30,230,488...30,332,099
Ensembl chr20:30,230,486...30,332,131

Hk2

hexokinase 2

rno:00520

NCBI chr 4:115,234,509...115,283,530
Ensembl chr 4:115,234,509...115,283,530

Hk3

hexokinase 3

rno:00520

NCBI chr17:9,596,950...9,614,847
Ensembl chr17:9,599,865...9,614,863

Mpi

mannose phosphate isomerase

rno:00520

NCBI chr 8:57,947,883...57,956,205
Ensembl chr 8:57,947,893...57,956,150

Nagk

N-acetylglucosamine kinase

SMP:00045 rno:00520

NCBI chr 4:116,281,179...116,293,870
Ensembl chr 4:116,281,328...116,313,137

Nanp

N-acetylneuraminic acid phosphatase

SMP:00045 rno:00520

NCBI chr 3:139,826,549...139,841,655
Ensembl chr 3:139,826,549...139,841,648

Nans

N-acetylneuraminate synthase

SMP:00045 rno:00520

NCBI chr 5:60,780,441...60,797,583
Ensembl chr 5:60,780,392...60,814,950

Npl

N-acetylneuraminate pyruvate lyase

SMP:00045 rno:00520

NCBI chr13:65,655,099...65,697,464
Ensembl chr13:65,655,118...65,697,372

Pgm1

phosphoglucomutase 1

rno:00520

NCBI chr 5:114,595,298...114,654,728
Ensembl chr 5:114,595,293...114,654,728

Pgm3

phosphoglucomutase 3

SMP:00045 rno:00520

NCBI chr 8:87,518,317...87,536,021
Ensembl chr 8:87,517,701...87,536,022

Pmm1

phosphomannomutase 1

rno:00520

NCBI chr 7:113,466,632...113,477,004
Ensembl chr 7:113,466,632...113,477,022

Pmm2

phosphomannomutase 2

rno:00520

NCBI chr10:6,961,521...6,982,913
Ensembl chr10:6,961,709...6,983,098

Renbp

renin binding protein

SMP:00045 rno:00520

NCBI chr X:151,661,463...151,670,538
Ensembl chr X:151,661,458...151,670,516

Slc17a5

solute carrier family 17 member 5

SMP:00045

NCBI chr 8:79,394,416...79,429,387

Uap1

UDP-N-acetylglucosamine pyrophosphorylase 1

SMP:00045 rno:00520

NCBI chr13:82,342,946...82,377,558
Ensembl chr13:82,342,946...82,377,469
Ensembl chr 6:82,342,946...82,377,469

Uap1l1

UDP-N-acetylglucosamine pyrophosphorylase 1 like 1

rno:00520

NCBI chr 3:8,172,335...8,180,505
Ensembl chr 3:8,173,216...8,180,443

Ugdh

UDP-glucose 6-dehydrogenase

rno:00520

NCBI chr14:42,848,704...42,872,351
Ensembl chr14:42,848,854...42,872,354

Ugp2

UDP-glucose pyrophosphorylase 2

rno:00520

NCBI chr14:95,456,330...95,497,483
Ensembl chr14:95,456,330...95,496,830

Uxs1

UDP-glucuronate decarboxylase 1

PMID:10642323 PMID:15283675

rno:00520

NCBI chr 9:653,740...731,121
Ensembl chr 9:653,659...756,334

angiotensin (1-7) signaling pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ace

angiotensin I converting enzyme

IMP
ISO

RGD

RGD:1581953, RGD:1598433

NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131

Ace2

angiotensin converting enzyme 2

NCBI chr X:30,293,597...30,340,961
Ensembl chr X:30,293,589...30,340,977

angiotensinogen

RGD

NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977

Mas1

MAS1 proto-oncogene, G protein-coupled receptor

IMP
ISO

RGD

PMID:15951342 PMID:16520407

RGD:1581938, RGD:1581931

NCBI chr 1:47,879,956...47,911,500
Ensembl chr 1:47,880,309...47,911,709

Mme

membrane metallo-endopeptidase

ISO
IMP

RGD

PMID:15638741 PMID:10642323 PMID:16520407

RGD:1581742, RGD:1581953, RGD:1581931

NCBI chr 2:147,686,913...147,803,808
Ensembl chr 2:147,722,086...147,803,792

angiotensin II signaling pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ace

angiotensin I converting enzyme

RGD

PMID:15638741

RGD:1581742

NCBI chr10:90,910,316...90,930,437
Ensembl chr10:90,910,316...90,931,131

angiotensinogen

RGD

NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977

Agtr1a

angiotensin II receptor, type 1a

RGD

PMID:15590154

RGD:1579760

NCBI chr17:34,173,446...34,226,892
Ensembl chr17:34,174,429...34,226,946

angiotensin II receptor, type 2

RGD

PMID:14657020

RGD:1566502

NCBI chr X:112,119,876...112,124,060
Ensembl chr X:112,120,228...112,124,057

Ccl2

C-C motif chemokine ligand 2

IEP

RGD

PMID:14684844

RGD:1582323

NCBI chr10:67,005,424...67,007,222
Ensembl chr10:67,005,424...67,007,226

chymase 1

RGD

NCBI chr15:29,417,451...29,420,233
Ensembl chr15:29,417,451...29,420,233

Janus kinase 2

RGD

NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189

Olr1

oxidized low density lipoprotein receptor 1

IEP

RGD

PMID:12661921

RGD:1580992

NCBI chr 4:162,926,436...162,949,057
Ensembl chr 4:162,926,439...162,948,523

Pdpk1

3-phosphoinositide dependent protein kinase-1

RGD

PMID:14585963

RGD:1581775

NCBI chr10:13,105,435...13,182,664
Ensembl chr10:13,105,498...13,174,623

Pla2g6

phospholipase A2 group VI

RGD

PMID:17613534

RGD:12910844

NCBI chr 7:110,851,378...110,891,557
Ensembl chr 7:110,851,378...110,891,114

Prkcz

protein kinase C, zeta

PMID:10977869 PMID:12446719 PMID:9287353 PMID:14559250

RGD

PMID:16113073

RGD:1642674

NCBI chr 5:165,817,786...165,930,386
Ensembl chr 5:165,819,466...165,930,367

angiotensin II signaling pathway via AT1 receptor

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

angiotensinogen

RGD

NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977

Agtr1a

angiotensin II receptor, type 1a

TAS
IMP
IDA

RGD

RGD:1581825, RGD:629553, RGD:5133683, RGD:2316188

NCBI chr17:34,173,446...34,226,892
Ensembl chr17:34,174,429...34,226,946

Agtr1b

angiotensin II receptor, type 1b

RGD

PMID:10977869

RGD:1581825

NCBI chr 2:102,844,969...102,920,232
Ensembl chr 2:102,844,969...102,920,232

Agtrap

angiotensin II receptor-associated protein

RGD

PMID:17875818

RGD:2314353

NCBI chr 5:158,507,427...158,519,036
Ensembl chr 5:158,508,749...158,519,036

Arap1

ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1

RGD

PMID:14559250

RGD:2316188

NCBI chr 1:155,748,622...155,814,186
Ensembl chr 1:155,748,652...155,814,184

arrestin, beta 1

RGD

NCBI chr 1:153,837,964...153,912,111
Ensembl chr 1:153,838,078...153,904,061

arrestin, beta 2

RGD

NCBI chr10:55,146,887...55,154,854
Ensembl chr10:55,146,818...55,154,850

Gna11

G protein subunit alpha 11

RGD

PMID:16141358

RGD:1581847

NCBI chr 7:8,163,520...8,177,863
Ensembl chr 7:8,162,750...8,179,812

Gnaq

G protein subunit alpha q

RGD

PMID:16141358

RGD:1581847

NCBI chr 1:213,425,631...213,671,947
Ensembl chr 1:213,424,465...213,667,672

Grk2

G protein-coupled receptor kinase 2

RGD

NCBI chr 1:201,580,823...201,601,580
Ensembl chr 1:201,581,480...201,601,582

Grk3

G protein-coupled receptor kinase 3

RGD

NCBI chr12:43,624,778...43,735,375
Ensembl chr12:43,624,897...43,731,262

Grk5

G protein-coupled receptor kinase 5

RGD

NCBI chr 1:260,028,269...260,223,699
Ensembl chr 1:260,028,242...260,218,701

Grk6

G protein-coupled receptor kinase 6

RGD

PMID:9287353 PMID:9314843

NCBI chr17:9,177,018...9,192,813
Ensembl chr17:9,177,019...9,192,644

Jak2

Janus kinase 2

IDA
IMP

RGD

RGD:5133683, RGD:6478796

NCBI chr 1:226,995,334...227,054,381
Ensembl chr 1:226,995,334...227,054,189

Rgs2

regulator of G-protein signaling 2

PMID:16286564 PMID:22949090 PMID:16286568

RGD

PMID:12588881

RGD:5133418

NCBI chr13:55,799,749...55,802,354
Ensembl chr13:55,798,829...55,802,385

tyrosine kinase 2

RGD

NCBI chr 8:19,641,881...19,667,157
Ensembl chr 8:19,641,884...19,667,044

angiotensin II signaling pathway via AT2 receptor

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Agt

angiotensinogen

IMP
ISO
TAS

RGD

RGD:1582434, RGD:7401256, RGD:1582435

NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977

PMID:10977869 PMID:22949090

angiotensin II receptor, type 2

TAS
ISO

RGD

RGD:1581825, RGD:7401256

NCBI chr X:112,119,876...112,124,060
Ensembl chr X:112,120,228...112,124,057

Cnksr1

connector enhancer of kinase suppressor of Ras 1

RGD

NCBI chr 5:146,447,495...146,458,332
Ensembl chr 5:146,447,497...146,458,212

Dusp1

dual specificity phosphatase 1

RGD

PMID:18804122

RGD:5133675

NCBI chr10:16,680,478...16,683,275

Erbb3

erb-b2 receptor tyrosine kinase 3

RGD

NCBI chr 7:994,549...1,015,876
Ensembl chr 7:996,225...1,015,525

Gnai2

G protein subunit alpha i2

RGD

PMID:22949090

RGD:7401256

NCBI chr 8:108,288,401...108,309,009
Ensembl chr 8:108,288,401...108,308,979

Gnai3

G protein subunit alpha i3

RGD

PMID:22949090

RGD:7401256

NCBI chr 2:195,742,765...195,780,720
Ensembl chr 2:195,742,642...195,780,742

Mtus1

microtubule associated scaffold protein 1

RGD

NCBI chr16:51,202,497...51,347,794
Ensembl chr16:51,253,562...51,347,793

Ptpn6

protein tyrosine phosphatase, non-receptor type 6

RGD

PMID:18804122

RGD:5133675

NCBI chr 4:157,526,034...157,550,783
Ensembl chr 4:157,526,035...157,550,984

Slc9a6

solute carrier family 9 member A6

RGD

NCBI chr X:134,430,677...134,486,747
Ensembl chr X:134,420,756...134,485,375

Timp3

TIMP metallopeptidase inhibitor 3

RGD

NCBI chr 7:17,520,827...17,571,850
Ensembl chr 7:17,521,919...17,571,839

Zbtb16

zinc finger and BTB domain containing 16

RGD

NCBI chr 8:48,989,376...49,177,011
Ensembl chr 8:48,994,566...49,177,011

angiotensin III signaling pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

angiotensinogen

RGD

NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977

Agtr1a

angiotensin II receptor, type 1a

RGD

PMID:11295571

RGD:1582124

NCBI chr17:34,173,446...34,226,892
Ensembl chr17:34,174,429...34,226,946

Agtr1b

angiotensin II receptor, type 1b

RGD

PMID:11295571

RGD:1582124

NCBI chr 2:102,844,969...102,920,232
Ensembl chr 2:102,844,969...102,920,232

angiotensin II receptor, type 2

RGD

PMID:11295571

RGD:1582124

NCBI chr X:112,119,876...112,124,060
Ensembl chr X:112,120,228...112,124,057

Enpep

glutamyl aminopeptidase

RGD

PMID:16537183

RGD:1581649

NCBI chr 2:217,781,985...217,851,947
Ensembl chr 2:217,782,005...217,851,947

angiotensin III signaling pathway via AT1 receptor

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

angiotensinogen

RGD

NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977

angiotensin III signaling pathway via AT2 receptor

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

angiotensinogen

RGD

NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977

angiotensin II receptor, type 2

RGD

PMID:16380540

RGD:1582118

NCBI chr X:112,119,876...112,124,060
Ensembl chr X:112,120,228...112,124,057

angiotensin IV signaling pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

angiotensinogen

RGD

NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977

Anpep

alanyl aminopeptidase, membrane

PMID:12591177 PMID:11282364

RGD

PMID:16537183

RGD:1581649

NCBI chr 1:133,767,332...133,810,137
Ensembl chr 1:133,767,332...133,785,789

Lnpep

leucyl and cystinyl aminopeptidase

TAS
IMP

RGD

RGD:1581864, RGD:1582105

NCBI chr 1:58,258,642...58,355,532
Ensembl chr 1:58,258,642...58,354,544

Rnpep

arginyl aminopeptidase

RGD

PMID:16537183

RGD:1581649

NCBI chr13:46,699,458...46,717,829
Ensembl chr13:46,699,463...46,717,998

angiotensin signaling pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

angiotensinogen

RGD

NCBI chr19:52,529,139...52,549,618
Ensembl chr19:52,529,185...52,540,977

arachidonic acid metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Akr1c3

aldo-keto reductase family 1, member C3

SMP:00075

NCBI chr17:66,110,970...66,127,867
Ensembl chr17:66,110,963...66,127,873

Alox12

arachidonate 12-lipoxygenase, 12S type

SMP:00075 rno:00590

NCBI chr10:54,958,263...54,970,542
Ensembl chr10:54,958,271...54,970,542

Alox12b

arachidonate 12-lipoxygenase, 12R type

SMP:00075 rno:00590

NCBI chr10:53,863,060...53,874,938
Ensembl chr10:53,863,060...53,874,938

Alox12e

arachidonate 12-lipoxygenase, epidermal

rno:00590

NCBI chr10:55,034,392...55,041,857
Ensembl chr10:55,034,392...55,041,928

Alox15

arachidonate 15-lipoxygenase

SMP:00075 rno:00590

NCBI chr10:55,060,169...55,068,885
Ensembl chr10:55,060,412...55,068,874

Alox15b

arachidonate 15-lipoxygenase, type B

SMP:00075 rno:00590

NCBI chr10:53,892,496...53,901,812
Ensembl chr10:53,892,466...53,901,812

Alox5

arachidonate 5-lipoxygenase

SMP:00075 rno:00590

NCBI chr 4:149,531,329...149,578,696
Ensembl chr 4:149,531,515...149,578,743

Cbr1

carbonyl reductase 1

SMP:00075 rno:00590

NCBI chr11:32,860,571...32,862,981
Ensembl chr11:32,908,950...32,911,393
Ensembl chr11:32,908,950...32,911,393
Ensembl chr11:32,908,950...32,911,393

Cbr3

carbonyl reductase 3

rno:00590

NCBI chr11:33,008,615...33,016,877
Ensembl chr11:33,008,615...33,016,875

Cyp2b1

cytochrome P450, family 2, subfamily b, polypeptide 1

rno:00590

NCBI chr 1:81,518,387...81,544,999
Ensembl chr 1:81,518,408...81,542,052

Cyp2b12

cytochrome P450, family 2, subfamily b, polypeptide 12

rno:00590

NCBI chr 1:82,007,609...82,019,409
Ensembl chr 1:82,007,609...82,080,480

Cyp2b2

cytochrome P450, family 2, subfamily b, polypeptide 2

rno:00590

NCBI chr 1:81,594,534...81,608,567
Ensembl chr 1:81,594,555...81,608,566

Cyp2b21

cytochrome P450, family 2, subfamily b, polypeptide 21

rno:00590

NCBI chr 1:81,886,097...81,915,066
Ensembl chr 1:81,886,098...81,915,066

Cyp2b3

cytochrome P450, family 2, subfamily b, polypeptide 3

SMP:00075 rno:00590

NCBI chr 1:81,652,762...81,732,153
Ensembl chr 1:81,652,787...81,732,143

Cyp2c11

cytochrome P450, subfamily 2, polypeptide 11

rno:00590

NCBI chr 1:236,762,719...236,799,069
Ensembl chr 1:236,762,842...236,799,066

Cyp2c12

cytochrome P450, family 2, subfamily c, polypeptide 12

rno:00590

NCBI chr 1:238,699,859...238,757,011
Ensembl chr 1:238,699,854...238,757,019

Cyp2c13

cytochrome P450, family 2, subfamily c, polypeptide 13

rno:00590

NCBI chr 1:238,786,764...238,867,195
Ensembl chr 1:238,786,765...238,867,191

Cyp2c22

cytochrome P450, family 2, subfamily c, polypeptide 22

rno:00590

NCBI chr 1:238,991,698...239,031,323
Ensembl chr 1:238,991,610...239,021,738

Cyp2c23

cytochrome P450, family 2, subfamily c, polypeptide 23

rno:00590

NCBI chr 1:242,889,218...242,913,869
Ensembl chr 1:242,889,224...242,913,858

Cyp2c7

cytochrome P450, family 2, subfamily c, polypeptide 7

rno:00590

NCBI chr 1:237,332,641...237,388,714
Ensembl chr 1:237,332,659...237,388,709

Cyp2c79

cytochrome P450, family 2, subfamily c, polypeptide 79

SMP:00075

Cyp2e1

cytochrome P450, family 2, subfamily e, polypeptide 1

SMP:00075 rno:00590

NCBI chr 1:195,840,330...195,850,728
Ensembl chr 1:195,840,058...195,864,023

Cyp2j16

cytochrome P450, family 2, subfamily j, polypeptide 16

rno:00590

NCBI chr 5:111,089,438...111,138,918
Ensembl chr 5:111,088,674...111,139,013

Cyp2j3

cytochrome P450, family 2, subfamily j, polypeptide 3

rno:00590

NCBI chr 5:111,219,921...111,244,987
Ensembl chr 5:111,178,703...111,244,794

Cyp2j4

cytochrome P450, family 2, subfamily j, polypeptide 4

SMP:00075 rno:00590

NCBI chr 5:111,179,981...111,207,490
Ensembl chr 5:111,178,703...111,244,794

Cyp2u1

cytochrome P450, family 2, subfamily u, polypeptide 1

SMP:00075 rno:00590

NCBI chr 2:219,849,403...219,866,959
Ensembl chr 2:219,849,407...219,866,882

Cyp4a1

cytochrome P450, family 4, subfamily a, polypeptide 1

rno:00590

NCBI chr 5:129,123,323...129,137,464
Ensembl chr 5:129,123,336...129,137,464

Cyp4a2

cytochrome P450, family 4, subfamily a, polypeptide 2

rno:00590

NCBI chr 5:128,922,355...128,934,188
Ensembl chr 5:128,923,615...128,934,165

Cyp4a3

cytochrome P450, family 4, subfamily a, polypeptide 3

rno:00590

NCBI chr 5:129,097,571...129,115,488
Ensembl chr 5:129,097,926...129,115,463

Cyp4a8

cytochrome P450, family 4, subfamily a, polypeptide 8

IMP
IEA

KEGG
RGD

PMID:15618658

rno:00590, RGD:2303409

NCBI chr 5:128,702,130...128,733,476
Ensembl chr 5:128,702,131...128,733,476

Cyp4f1

cytochrome P450, family 4, subfamily f, polypeptide 1

rno:00590

NCBI chr 7:12,010,850...12,022,497
Ensembl chr 7:12,010,852...12,022,046

Cyp4f17

cytochrome P450, family 4, subfamily f, polypeptide 17

rno:00590

NCBI chr 7:11,518,985...11,536,208
Ensembl chr 7:11,433,371...11,536,181

Cyp4f18

cytochrome P450, family 4, subfamily f, polypeptide 18

SMP:00075 rno:00590

NCBI chr16:17,763,543...17,804,944
Ensembl chr16:17,707,317...17,804,940

Cyp4f4

cytochrome P450, family 4, subfamily f, polypeptide 4

rno:00590

NCBI chr 7:11,717,208...11,733,507
Ensembl chr 7:11,717,208...11,733,506

Cyp4f40

cytochrome P450, family 4, subfamily f, polypeptide 40

rno:00590

NCBI chr 7:11,691,648...11,707,437
Ensembl chr 7:11,692,086...11,706,229

Cyp4f5

cytochrome P450, family 4, subfamily f, polypeptide 5

rno:00590

NCBI chr 7:11,544,040...11,558,982
Ensembl chr 7:11,544,082...11,558,978

Cyp4f6

cytochrome P450, family 4, subfamily f, polypeptide 6

rno:00590

NCBI chr 7:12,030,276...12,058,020
Ensembl chr 7:12,030,301...12,057,782

Ephx2

epoxide hydrolase 2

SMP:00075 rno:00590

NCBI chr15:40,289,901...40,327,632
Ensembl chr15:40,289,902...40,327,615

Ggt1

gamma-glutamyltransferase 1

SMP:00075 rno:00590

NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442

Ggt5

gamma-glutamyltransferase 5

rno:00590

NCBI chr20:13,043,255...13,071,523
Ensembl chr20:13,043,257...13,071,450

Ggt6

gamma-glutamyl transferase 6

rno:00590

NCBI chr10:57,051,977...57,054,900
Ensembl chr10:57,051,825...57,067,260

Ggt7

gamma-glutamyltransferase 7

rno:00590

NCBI chr 3:143,978,073...144,004,597
Ensembl chr 3:143,978,082...144,001,492

Gpx1

glutathione peroxidase 1

SMP:00075 rno:00590

NCBI chr 8:109,026,905...109,028,031
Ensembl chr 8:109,026,905...109,028,024

Gpx2

glutathione peroxidase 2

rno:00590

NCBI chr 6:95,493,589...95,496,877
Ensembl chr 6:95,493,589...95,496,877

Gpx3

glutathione peroxidase 3

rno:00590

NCBI chr10:39,028,624...39,036,695
Ensembl chr10:39,028,570...39,037,035

Gpx5

glutathione peroxidase 5

rno:00590

NCBI chr17:43,436,126...43,443,074
Ensembl chr17:43,416,340...43,443,074

Gpx6

glutathione peroxidase 6

rno:00590

NCBI chr17:43,408,472...43,416,091
Ensembl chr17:43,408,472...43,416,091

Gpx7

glutathione peroxidase 7

rno:00590

NCBI chr 5:123,145,151...123,153,141
Ensembl chr 5:123,144,331...123,153,004

Gpx8

glutathione peroxidase 8

rno:00590

NCBI chr 2:44,676,448...44,680,042
Ensembl chr 2:44,676,454...44,680,195

Hpgds

hematopoietic prostaglandin D synthase

rno:00590

NCBI chr 4:94,368,426...94,397,931
Ensembl chr 4:94,373,342...94,397,883

Lta4h

leukotriene A4 hydrolase

SMP:00075 rno:00590

NCBI chr 7:27,969,796...28,001,600
Ensembl chr 7:27,969,789...28,001,600

Ltc4s

leukotriene C4 synthase

SMP:00075 rno:00590

NCBI chr10:34,560,476...34,562,790
Ensembl chr10:34,560,360...34,562,651

Pla2g10

phospholipase A2, group X

rno:00590

NCBI chr10:1,597,761...1,610,822
Ensembl chr10:1,597,761...1,609,000

Pla2g12a

phospholipase A2, group XIIA

rno:00590

NCBI chr 2:218,436,497...218,452,742
Ensembl chr 2:218,436,513...218,452,740

Pla2g12b

phospholipase A2, group XIIB

rno:00590

NCBI chr20:27,369,196...27,389,517
Ensembl chr20:27,370,266...27,388,743

Pla2g1b

phospholipase A2 group IB

rno:00590

NCBI chr12:41,142,193...41,151,967
Ensembl chr12:41,142,200...41,153,226

Pla2g2a

phospholipase A2 group IIA

rno:00590

NCBI chr 5:151,076,442...151,079,019
Ensembl chr 5:151,076,442...151,079,014

Pla2g2c

phospholipase A2, group IIC

rno:00590

NCBI chr 5:150,959,365...150,981,388
Ensembl chr 5:150,959,182...150,981,377

Pla2g2d

phospholipase A2, group IID

rno:00590

NCBI chr 5:151,016,010...151,022,531
Ensembl chr 5:151,018,870...151,022,525

Pla2g2f

phospholipase A2, group IIF

rno:00590

NCBI chr 5:150,986,788...150,993,175
Ensembl chr 5:150,986,788...150,993,175

Pla2g3

phospholipase A2, group III

rno:00590

NCBI chr14:78,367,625...78,373,913
Ensembl chr14:78,368,105...78,373,913

Pla2g4a

phospholipase A2 group 4A

rno:00590

NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266

Pla2g4b

phospholipase A2 group IVB

SMP:00075 rno:00590

NCBI chr 3:107,004,238...107,013,853
Ensembl chr 3:107,005,489...107,013,853

Pla2g4e

phospholipase A2, group IVE

rno:00590

NCBI chr 3:107,132,540...107,198,609
Ensembl chr 3:107,132,541...107,198,233

Pla2g4f

phospholipase A2, group IVF

rno:00590

NCBI chr 3:107,249,053...107,266,201
Ensembl chr 3:107,250,075...107,264,689

Pla2g5

phospholipase A2, group V

rno:00590

NCBI chr 5:151,041,339...151,109,433
Ensembl chr 5:151,041,340...151,062,658

Pla2g6

phospholipase A2 group VI

rno:00590

NCBI chr 7:110,851,378...110,891,557
Ensembl chr 7:110,851,378...110,891,114

Plb1

phospholipase B1

rno:00590

NCBI chr 6:24,087,051...24,227,167
Ensembl chr 6:24,089,214...24,210,117

Prxl2b

peroxiredoxin like 2B

SMP:00075

NCBI chr 5:165,462,610...165,465,213

Ptgds

prostaglandin D2 synthase

SMP:00075 rno:00590

NCBI chr 3:8,281,899...8,284,833
Ensembl chr 3:8,281,899...8,284,833

Ptges

prostaglandin E synthase

SMP:00075 rno:00590

NCBI chr 3:14,177,892...14,189,236

Ptges2

prostaglandin E synthase 2

rno:00590

NCBI chr 3:15,690,501...15,697,688
Ensembl chr 3:15,690,501...15,697,688

Ptgis

prostaglandin I2 synthase

SMP:00075 rno:00590

NCBI chr 3:155,928,564...155,964,228
Ensembl chr 3:155,916,412...155,965,451

Ptgs1

prostaglandin-endoperoxide synthase 1

SMP:00075 rno:00590

NCBI chr 3:19,584,015...19,605,589
Ensembl chr 3:19,584,015...19,605,586

Ptgs2

prostaglandin-endoperoxide synthase 2

SMP:00075 rno:00590

NCBI chr13:62,163,936...62,172,193
Ensembl chr13:62,163,932...62,172,188

Tbxas1

thromboxane A synthase 1

SMP:00075 rno:00590

NCBI chr 4:67,664,963...67,837,096
Ensembl chr 4:67,665,007...67,837,096

arginine and proline metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Acy1

aminoacylase 1

rno:00330

NCBI chr 8:107,072,354...107,077,756
Ensembl chr 8:107,072,358...107,077,682

Agmat

agmatinase

rno:00330

NCBI chr 5:154,043,665...154,074,278
Ensembl chr 5:154,060,151...154,074,276

Aldh18a1

aldehyde dehydrogenase 18 family, member A1

rno:00330

NCBI chr 1:239,375,657...239,407,956
Ensembl chr 1:239,375,669...239,407,890

Aldh1a1

aldehyde dehydrogenase 1 family, member A1

rno:00330

NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961

Aldh1a7

aldehyde dehydrogenase family 1, subfamily A7

rno:00330

NCBI chr 1:218,201,443...218,241,410
Ensembl chr 1:218,201,472...218,248,906

Aldh1b1

aldehyde dehydrogenase 1 family, member B1

rno:00330

NCBI chr 5:60,063,370...60,068,378
Ensembl chr 5:60,063,225...60,068,378

Aldh2

aldehyde dehydrogenase 2 family member

rno:00330

NCBI chr12:34,949,549...34,982,527
Ensembl chr12:34,901,219...34,982,521

Aldh3a2

aldehyde dehydrogenase 3 family, member A2

rno:00330

NCBI chr10:45,928,313...45,949,366
Ensembl chr10:45,908,524...45,949,281

Aldh4a1

aldehyde dehydrogenase 4 family, member A1

SMP:00020 rno:00330

NCBI chr 5:151,880,002...151,905,491
Ensembl chr 5:151,830,701...151,925,345

aldehyde dehydrogenase 7 family, member A1

rno:00330

NCBI chr18:50,003,242...50,042,193
Ensembl chr18:50,009,934...50,042,193

aldehyde dehydrogenase 9 family, member A1

rno:00330

NCBI chr13:79,505,738...79,522,539
Ensembl chr13:79,505,695...79,540,568

Amd1

adenosylmethionine decarboxylase 1

rno:00330

NCBI chr20:43,695,783...43,711,476
Ensembl chr20:43,697,237...43,711,476

Aoc1

amine oxidase, copper containing 1

rno:00330

NCBI chr 4:77,812,260...77,831,846
Ensembl chr 4:77,812,260...77,831,840

Arg1

arginase 1

SMP:00020 rno:00330

NCBI chr 1:20,475,878...20,488,422
Ensembl chr 1:20,475,968...20,488,422

Arg2

arginase 2

rno:00330

NCBI chr 6:97,936,002...97,961,379
Ensembl chr 6:97,936,002...97,961,378

Asl

argininosuccinate lyase

SMP:00020 rno:00330

NCBI chr12:26,659,664...26,677,136
Ensembl chr12:26,659,565...26,679,662

Ass1

argininosuccinate synthase 1

SMP:00020 rno:00330

NCBI chr 3:14,747,355...14,796,909
Ensembl chr 3:14,747,368...14,796,903

Ckb

creatine kinase B

SMP:00020 rno:00330

NCBI chr 6:130,729,420...130,732,301
Ensembl chr 6:130,729,423...130,732,315

Ckm

creatine kinase, M-type

rno:00330

NCBI chr 1:79,061,390...79,071,721
Ensembl chr 1:79,061,456...79,071,720

Ckmt2

creatine kinase, mitochondrial 2

rno:00330

NCBI chr 2:23,079,918...23,110,518
Ensembl chr 2:23,079,918...23,110,430

Cps1

carbamoyl-phosphate synthase 1

SMP:00020 rno:00330

NCBI chr 9:68,614,153...68,737,037
Ensembl chr 9:68,614,153...68,737,033

Dao

D-amino-acid oxidase

SMP:00020 rno:00330

NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741

Eprs1

glutamyl-prolyl-tRNA synthetase 1

SMP:00020

NCBI chr13:96,901,548...96,971,966
Ensembl chr13:96,901,575...96,971,966

Gamt

guanidinoacetate N-methyltransferase

SMP:00020 rno:00330

NCBI chr 7:9,448,590...9,451,413
Ensembl chr 7:9,448,628...9,451,778

Gatm

glycine amidinotransferase

SMP:00020 rno:00330

NCBI chr 3:109,658,919...109,675,508
Ensembl chr 3:109,658,951...109,684,129

Gls

glutaminase

rno:00330

NCBI chr 9:49,344,616...49,416,900
Ensembl chr 9:49,344,781...49,416,900

Gls2

glutaminase 2

rno:00330

NCBI chr 7:617,252...633,424
Ensembl chr 7:617,288...633,426

Glud1

glutamate dehydrogenase 1

SMP:00020 rno:00330

NCBI chr16:9,640,312...9,673,961
Ensembl chr16:9,640,312...9,673,957

Glul

glutamate-ammonia ligase

rno:00330

NCBI chr13:65,969,053...66,035,121
Ensembl chr13:66,025,630...66,035,108

glutamic-oxaloacetic transaminase 1

SMP:00020 rno:00330

NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633

Got2

glutamic-oxaloacetic transaminase 2

rno:00330

NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994

Lap3

leucine aminopeptidase 3

rno:00330

NCBI chr14:65,608,375...65,627,359
Ensembl chr14:65,608,376...65,627,359

Maoa

monoamine oxidase A

rno:00330

NCBI chr X:6,032,172...6,098,308
Ensembl chr X:6,030,795...6,099,593

Maob

monoamine oxidase B

rno:00330

NCBI chr X:5,907,327...6,010,996
Ensembl chr X:5,907,266...6,011,003

Nags

N-acetylglutamate synthase

rno:00330

NCBI chr10:87,098,330...87,102,465
Ensembl chr10:87,098,330...87,102,465

Nos1

nitric oxide synthase 1

SMP:00020 rno:00330

NCBI chr12:38,615,111...38,795,492
Ensembl chr12:38,626,714...38,710,945

Nos2

nitric oxide synthase 2

rno:00330

NCBI chr10:63,815,308...63,851,208
Ensembl chr10:63,815,308...63,851,210

Nos3

nitric oxide synthase 3

rno:00330

NCBI chr 4:10,793,834...10,814,170
Ensembl chr 4:10,793,834...10,814,166

Oat

ornithine aminotransferase

SMP:00020 rno:00330

NCBI chr 1:187,347,862...187,367,644
Ensembl chr 1:187,347,865...187,367,682

Odc1

ornithine decarboxylase 1

rno:00330

NCBI chr 6:40,329,831...40,336,444
Ensembl chr 6:40,329,964...40,336,440

Otc

ornithine transcarbamylase

SMP:00020 rno:00330

NCBI chr X:12,453,834...12,529,954
Ensembl chr X:12,453,834...12,566,918

P4ha1

prolyl 4-hydroxylase subunit alpha 1

rno:00330

NCBI chr20:27,302,046...27,352,098
Ensembl chr20:27,302,141...27,352,786

P4ha2

prolyl 4-hydroxylase subunit alpha 2

rno:00330

NCBI chr10:38,243,136...38,271,983
Ensembl chr10:38,243,139...38,287,314

P4ha3

prolyl 4-hydroxylase subunit alpha 3

SMP:00020 rno:00330

NCBI chr 1:154,628,723...154,663,779
Ensembl chr 1:154,628,736...154,663,775

Prodh

proline dehydrogenase

SMP:00020 rno:00330

NCBI chr11:82,910,043...82,927,305
Ensembl chr11:82,910,137...82,927,305

Prodh2

proline dehydrogenase 2

rno:00330

NCBI chr 1:85,753,558...85,767,165
Ensembl chr 1:85,753,644...85,767,162

Pycr1

pyrroline-5-carboxylate reductase 1

rno:00330

NCBI chr10:105,917,732...105,922,658
Ensembl chr10:105,917,680...105,922,549

Pycr2

pyrroline-5-carboxylate reductase 2

SMP:00020 rno:00330

NCBI chr13:92,626,462...92,630,256
Ensembl chr13:92,626,471...92,634,184

Pycr3

pyrroline-5-carboxylate reductase 3

rno:00330

NCBI chr 7:107,603,543...107,608,831
Ensembl chr 7:107,581,930...107,608,799

Rars2

arginyl-tRNA synthetase 2, mitochondrial

SMP:00020

NCBI chr 5:49,181,517...49,238,664
Ensembl chr 5:49,181,565...49,233,276

Sat1

spermidine/spermine N1-acetyl transferase 1

rno:00330

NCBI chr X:40,158,354...40,161,641
Ensembl chr X:40,157,046...40,196,813

Sat2

spermidine/spermine N1-acetyltransferase family member 2

rno:00330

NCBI chr10:54,340,756...54,343,507
Ensembl chr10:54,340,372...54,343,224

Slc25a15

solute carrier family 25 member 15

SMP:00020

NCBI chr16:69,631,581...69,654,869
Ensembl chr16:69,634,414...69,653,010

Srm

spermidine synthase

rno:00330

NCBI chr 5:159,025,875...159,029,076
Ensembl chr 5:159,025,873...159,029,405

aryl hydrocarbon receptor signaling pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ahr

aryl hydrocarbon receptor

RGD

PMID:10639156

RGD:1300277

NCBI chr 6:52,234,089...52,271,568
Ensembl chr 6:52,234,089...52,271,568

Arnt

aryl hydrocarbon receptor nuclear translocator

RGD

PMID:1317062

RGD:41410437

NCBI chr 2:182,997,731...183,056,584
Ensembl chr 2:182,997,736...183,056,580

Arnt2

aryl hydrocarbon receptor nuclear translocator 2

RGD

PMID:12859947

RGD:631760

NCBI chr 1:138,236,235...138,392,868
Ensembl chr 1:138,189,940...138,393,153

ascorbate and aldarate metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Aldh1a1

aldehyde dehydrogenase 1 family, member A1

rno:00053

NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961

Aldh1a7

aldehyde dehydrogenase family 1, subfamily A7

rno:00053

NCBI chr 1:218,201,443...218,241,410
Ensembl chr 1:218,201,472...218,248,906

Aldh1b1

aldehyde dehydrogenase 1 family, member B1

rno:00053

NCBI chr 5:60,063,370...60,068,378
Ensembl chr 5:60,063,225...60,068,378

Aldh2

aldehyde dehydrogenase 2 family member

rno:00053

NCBI chr12:34,949,549...34,982,527
Ensembl chr12:34,901,219...34,982,521

Aldh3a2

aldehyde dehydrogenase 3 family, member A2

rno:00053

NCBI chr10:45,928,313...45,949,366
Ensembl chr10:45,908,524...45,949,281

aldehyde dehydrogenase 7 family, member A1

rno:00053

NCBI chr18:50,003,242...50,042,193
Ensembl chr18:50,009,934...50,042,193

aldehyde dehydrogenase 9 family, member A1

rno:00053

NCBI chr13:79,505,738...79,522,539
Ensembl chr13:79,505,695...79,540,568

Gulo

gulonolactone (L-) oxidase

rno:00053

NCBI chr15:40,205,677...40,227,766
Ensembl chr15:40,205,665...40,227,874

Miox

myo-inositol oxygenase

rno:00053

NCBI chr 7:120,405,031...120,407,529
Ensembl chr 7:120,405,031...120,407,537

Rgn

regucalcin

rno:00053

NCBI chr X:1,619,030...1,634,456
Ensembl chr X:1,619,032...1,634,450

Ugdh

UDP-glucose 6-dehydrogenase

rno:00053

NCBI chr14:42,848,704...42,872,351
Ensembl chr14:42,848,854...42,872,354

Ugt1a1

UDP glucuronosyltransferase family 1 member A1

rno:00053

NCBI chr 9:88,801,344...88,808,465
Ensembl chr 9:88,713,184...88,808,465

Ugt1a2

UDP glucuronosyltransferase 1 family, polypeptide A2

rno:00053

NCBI chr 9:88,791,216...88,808,465
Ensembl chr 9:88,713,184...88,808,465

Ugt1a3

UDP glycosyltransferase 1 family, polypeptide A3

rno:00053

NCBI chr 9:88,780,328...88,808,465
Ensembl chr 9:88,713,184...88,808,465

Ugt1a5

UDP glucuronosyltransferase family 1 member A5

rno:00053

NCBI chr 9:88,762,250...88,808,465
Ensembl chr 9:88,713,184...88,808,465

Ugt1a6

UDP glucuronosyltransferase family 1 member A6

rno:00053

NCBI chr 9:88,747,213...88,808,465
Ensembl chr 9:88,713,184...88,808,465

Ugt1a7c

UDP glucuronosyltransferase 1 family, polypeptide A7C

rno:00053

NCBI chr 9:88,739,577...88,808,465
Ensembl chr 9:88,713,184...88,808,465

Ugt1a8

UDP glucuronosyltransferase family 1 member A8

rno:00053

NCBI chr 9:88,727,094...88,808,465
Ensembl chr 9:88,713,184...88,808,465

Ugt1a9

UDP glucuronosyltransferase family 1 member A9

rno:00053

NCBI chr 9:88,696,981...88,808,465
Ensembl chr 9:88,713,184...88,808,465

Ugt2a1

UDP glucuronosyltransferase family 2 member A1

rno:00053

NCBI chr14:20,521,018...20,545,934
Ensembl chr14:20,517,951...20,545,531

Ugt2a3

UDP glucuronosyltransferase family 2 member A3

rno:00053

NCBI chr14:20,572,793...20,590,795
Ensembl chr14:20,572,808...20,590,729

Ugt2b

UDP glycosyltransferase 2 family, polypeptide B

rno:00053

NCBI chr14:20,630,572...20,665,062
Ensembl chr14:20,630,250...20,651,776

Ugt2b1

UDP glucuronosyltransferase 2 family, polypeptide B1

rno:00053

NCBI chr14:21,024,035...21,035,784
Ensembl chr14:21,024,006...21,035,986

Ugt2b37

UDP-glucuronosyltransferase 2 family, member 37

rno:00053

NCBI chr14:20,817,285...20,833,917
Ensembl chr14:20,817,285...20,833,917

beta-alanine metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Abat

4-aminobutyrate aminotransferase

SMP:00007 rno:00410

NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835

Acadm

acyl-CoA dehydrogenase medium chain

rno:00410

NCBI chr 2:242,858,865...242,883,036
Ensembl chr 2:242,858,865...242,883,147

Aldh1a1

aldehyde dehydrogenase 1 family, member A1

rno:00410

NCBI chr 1:218,000,470...218,152,962
Ensembl chr 1:218,042,127...218,152,961

Aldh1a3

aldehyde dehydrogenase 1 family, member A3

rno:00410

NCBI chr 1:119,982,272...120,017,416
Ensembl chr 1:119,982,277...120,017,436

Aldh1a7

aldehyde dehydrogenase family 1, subfamily A7

rno:00410

NCBI chr 1:218,201,443...218,241,410
Ensembl chr 1:218,201,472...218,248,906

Aldh1b1

aldehyde dehydrogenase 1 family, member B1

rno:00410

NCBI chr 5:60,063,370...60,068,378
Ensembl chr 5:60,063,225...60,068,378

Aldh2

aldehyde dehydrogenase 2 family member

SMP:00007 rno:00410

NCBI chr12:34,949,549...34,982,527
Ensembl chr12:34,901,219...34,982,521

Aldh3a1

aldehyde dehydrogenase 3 family, member A1

rno:00410

NCBI chr10:45,892,993...45,902,680
Ensembl chr10:45,892,924...45,902,681

Aldh3a2

aldehyde dehydrogenase 3 family, member A2

rno:00410

NCBI chr10:45,928,313...45,949,366
Ensembl chr10:45,908,524...45,949,281

Aldh3b1

aldehyde dehydrogenase 3 family, member B1

rno:00410

NCBI chr 1:201,145,309...201,162,675
Ensembl chr 1:201,145,309...201,163,921

Aldh6a1

aldehyde dehydrogenase 6 family, member A1

SMP:00007

NCBI chr 6:104,077,975...104,098,636
Ensembl chr 6:104,077,979...104,098,656

aldehyde dehydrogenase 7 family, member A1

rno:00410

NCBI chr18:50,003,242...50,042,193
Ensembl chr18:50,009,934...50,042,193

aldehyde dehydrogenase 9 family, member A1

rno:00410

NCBI chr13:79,505,738...79,522,539
Ensembl chr13:79,505,695...79,540,568

Aoc3

amine oxidase, copper containing 3

SMP:00007 rno:00410

NCBI chr10:86,272,757...86,280,702

Cndp1

carnosine dipeptidase 1

SMP:00007 rno:00410

NCBI chr18:77,984,886...78,030,837
Ensembl chr18:77,984,907...78,007,765

Dpyd

dihydropyrimidine dehydrogenase

SMP:00007 rno:00410

NCBI chr 2:206,609,043...207,474,982
Ensembl chr 2:206,609,122...207,474,982

Dpys

dihydropyrimidinase

SMP:00007 rno:00410

NCBI chr 7:70,822,648...70,929,255
Ensembl chr 7:70,835,789...70,929,231

Echs1

enoyl-CoA hydratase, short chain 1

rno:00410

NCBI chr 1:194,895,036...194,903,863
Ensembl chr 1:194,895,036...194,903,884

Ehhadh

enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase

rno:00410

NCBI chr11:79,241,927...79,275,173
Ensembl chr11:79,241,938...79,275,188

Gad1

glutamate decarboxylase 1

SMP:00007 rno:00410

NCBI chr 3:55,369,704...55,410,335
Ensembl chr 3:55,369,704...55,410,333

Gad2

glutamate decarboxylase 2

rno:00410

NCBI chr17:84,763,630...84,826,155
Ensembl chr17:84,763,628...84,826,155

Hadha

hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha

rno:00410

NCBI chr 6:26,187,969...26,227,605
Ensembl chr 6:26,187,956...26,227,869

Hibch

3-hydroxyisobutyryl-CoA hydrolase

rno:00410

NCBI chr 9:48,590,097...48,669,896
Ensembl chr 9:48,590,099...48,669,824

Mlycd

malonyl-CoA decarboxylase

rno:00410

NCBI chr19:47,447,931...47,463,794
Ensembl chr19:47,447,970...47,463,793

Srm

spermidine synthase

rno:00410

NCBI chr 5:159,025,875...159,029,076
Ensembl chr 5:159,025,873...159,029,405

Upb1

beta-ureidopropionase 1

SMP:00007 rno:00410

NCBI chr20:13,217,252...13,243,590
Ensembl chr20:13,217,258...13,243,590

bile acid biosynthetic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Acox2

acyl-CoA oxidase 2

SMP:00035 rno:00120

NCBI chr15:16,660,584...16,692,160
Ensembl chr15:16,660,272...16,692,160

Akr1c1

aldo-keto reductase family 1, member C1

SMP:00035

NCBI chr17:65,810,474...65,837,385
Ensembl chr17:65,810,475...65,837,326

Akr1d1

aldo-keto reductase family 1, member D1

SMP:00035 rno:00120

NCBI chr 4:66,154,246...66,187,505
Ensembl chr 4:66,154,248...66,186,372

Amacr

alpha-methylacyl-CoA racemase

SMP:00035 rno:00120

NCBI chr 2:59,946,158...59,958,255
Ensembl chr 2:59,946,153...59,958,255

Baat

bile acid CoA:amino acid N-acyltransferase

SMP:00035 rno:00120

NCBI chr 5:63,851,668...63,860,641
Ensembl chr 5:63,850,705...63,860,685

Ch25h

cholesterol 25-hydroxylase

SMP:00035 rno:00120

NCBI chr 1:232,014,877...232,016,195
Ensembl chr 1:232,014,880...232,016,195

Cyp27a1

cytochrome P450, family 27, subfamily a, polypeptide 1

SMP:00035 rno:00120

NCBI chr 9:76,264,655...76,294,551
Ensembl chr 9:76,264,860...76,294,551

Cyp39a1

cytochrome P450, family 39, subfamily a, polypeptide 1

SMP:00035 rno:00120

NCBI chr 9:17,230,455...17,306,775
Ensembl chr 9:17,230,455...17,306,775

Cyp46a1

cytochrome P450, family 46, subfamily a, polypeptide 1

SMP:00035 rno:00120

NCBI chr 6:127,247,543...127,274,765
Ensembl chr 6:127,243,315...127,274,760

Cyp7a1

cytochrome P450 family 7 subfamily A member 1

SMP:00035 rno:00120

NCBI chr 5:19,376,979...19,386,676
Ensembl chr 5:19,376,974...19,386,688

Cyp7b1

cytochrome P450 family 7 subfamily B member 1

SMP:00035 rno:00120

NCBI chr 2:100,502,791...100,669,713
Ensembl chr 2:100,502,791...100,669,698

Cyp8b1

cytochrome P450 family 8 subfamily B member 1

SMP:00035 rno:00120

NCBI chr 8:121,578,123...121,580,093
Ensembl chr 8:121,557,062...121,580,166

Hsd17b4

hydroxysteroid (17-beta) dehydrogenase 4

SMP:00035 rno:00120

NCBI chr18:43,328,903...43,417,950
Ensembl chr18:43,328,824...43,417,952

Hsd3b7

hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7

SMP:00035 rno:00120

NCBI chr 1:182,412,216...182,415,447
Ensembl chr 1:182,412,151...182,415,442

Lipa

lipase A, lysosomal acid type

SMP:00035

NCBI chr 1:232,024,351...232,057,735
Ensembl chr 1:232,024,356...232,057,633

Scp2

sterol carrier protein 2

SMP:00035 rno:00120

NCBI chr 5:122,806,949...122,881,259
Ensembl chr 5:122,776,549...122,881,287

Slc27a5

solute carrier family 27 member 5

SMP:00035 rno:00120

NCBI chr 1:73,616,556...73,627,149
Ensembl chr 1:73,616,564...73,627,172

biotin metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Arxes1

adipocyte-related X-chromosome expressed sequence 1

rno:00780

NCBI chr X:98,950,530...98,952,049
Ensembl chr X:98,950,528...98,952,045

Btd

biotinidase

SMP:00066 rno:00780

NCBI chr16:6,863,068...6,894,345
Ensembl chr16:6,862,407...6,940,945

Hlcs

holocarboxylase synthetase

SMP:00066 rno:00780

NCBI chr11:33,455,806...33,635,197
Ensembl chr11:33,455,809...33,624,222

Spcs1

signal peptidase complex subunit 1

SMP:00066

NCBI chr16:6,190,208...6,191,776
Ensembl chr16:6,190,262...6,192,000

butanoate metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Aacs

acetoacetyl-CoA synthetase

rno:00650

NCBI chr12:31,113,098...31,156,411
Ensembl chr12:31,113,098...31,160,954

Abat

4-aminobutyrate aminotransferase

rno:00650

NCBI chr10:6,996,688...7,092,835
Ensembl chr10:6,999,819...7,092,835

Acads

acyl-CoA dehydrogenase short chain

SMP:00073 rno:00650

NCBI chr12:41,493,650...41,502,897
Ensembl chr12:41,493,626...41,502,898

Acat1

acetyl-CoA acetyltransferase 1

SMP:00073 rno:00650

NCBI chr 8:53,979,813...54,008,861
Ensembl chr 8:53,979,813...54,008,855

Acat2

acetyl-CoA acetyltransferase 2

rno:00650

NCBI chr 1:47,695,833...47,713,879
Ensembl chr 1:47,695,788...47,752,821

Acsm1

acyl-CoA synthetase medium-chain family member 1

SMP:00073

NCBI chr 1:173,985,715...174,020,565
Ensembl chr 1:173,984,672...174,025,495

Acsm3

acyl-CoA synthetase medium-chain family member 3

rno:00650

NCBI chr 1:174,133,260...174,159,966
Ensembl chr 1:174,133,288...174,160,184

Acsm4

acyl-CoA synthetase medium-chain family member 4

rno:00650

NCBI chr 1:174,053,931...174,078,345
Ensembl chr 1:174,053,931...174,078,341

Acsm5

acyl-CoA synthetase medium-chain family member 5

rno:00650

NCBI chr 1:173,870,873...173,896,838
Ensembl chr 1:173,863,041...173,898,588

Aldh5a1

aldehyde dehydrogenase 5 family, member A1

rno:00650

NCBI chr17:40,132,339...40,158,677
Ensembl chr17:40,130,883...40,158,677

Bdh1

3-hydroxybutyrate dehydrogenase 1

rno:00650

NCBI chr11:69,302,534...69,343,173
Ensembl chr11:69,302,534...69,337,671

Bdh2

3-hydroxybutyrate dehydrogenase 2

rno:00650

NCBI chr 2:223,702,410...223,723,076
Ensembl chr 2:223,702,412...223,723,072

Echs1

enoyl-CoA hydratase, short chain 1

SMP:00073 rno:00650

NCBI chr 1:194,895,036...194,903,863
Ensembl chr 1:194,895,036...194,903,884

Ehhadh

enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase

rno:00650

NCBI chr11:79,241,927...79,275,173
Ensembl chr11:79,241,938...79,275,188

Gad1

glutamate decarboxylase 1

rno:00650

NCBI chr 3:55,369,704...55,410,335
Ensembl chr 3:55,369,704...55,410,333

Gad2

glutamate decarboxylase 2

rno:00650

NCBI chr17:84,763,630...84,826,155
Ensembl chr17:84,763,628...84,826,155

Hadh

hydroxyacyl-CoA dehydrogenase

SMP:00073 rno:00650

NCBI chr 2:219,787,935...219,830,335
Ensembl chr 2:219,787,927...219,830,353

Hadha

hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha

rno:00650

NCBI chr 6:26,187,969...26,227,605
Ensembl chr 6:26,187,956...26,227,869

Hmgcl

3-hydroxy-3-methylglutaryl-CoA lyase

SMP:00073 rno:00650

NCBI chr 5:148,178,203...148,192,072
Ensembl chr 5:148,178,252...148,192,068

Hmgcs1

3-hydroxy-3-methylglutaryl-CoA synthase 1

rno:00650

NCBI chr 2:51,649,368...51,667,100
Ensembl chr 2:51,649,497...51,667,100

Hmgcs2

3-hydroxy-3-methylglutaryl-CoA synthase 2

SMP:00073 rno:00650

NCBI chr 2:185,875,609...185,903,505
Ensembl chr 2:185,875,616...185,902,130

L2hgdh

L-2-hydroxyglutarate dehydrogenase

rno:00650

NCBI chr 6:88,164,429...88,205,585
Ensembl chr 6:88,164,440...88,205,578

Oxct1

3-oxoacid CoA transferase 1

SMP:00073 rno:00650

NCBI chr 2:53,236,370...53,384,715
Ensembl chr 2:53,236,368...53,384,714

Oxct2a

3-oxoacid CoA transferase 2A

rno:00650

NCBI chr 5:135,600,812...135,602,570
Ensembl chr 5:135,591,507...135,602,569

Pdha1

pyruvate dehydrogenase E1 subunit alpha 1

rno:00650

NCBI chr X:34,700,481...34,714,309
Ensembl chr X:34,700,409...34,714,311

Pdha2

pyruvate dehydrogenase E1 subunit alpha 2

rno:00650

NCBI chr 2:229,872,300...229,873,848

Pdhb

pyruvate dehydrogenase E1 subunit beta

rno:00650

NCBI chr15:16,752,561...16,758,503
Ensembl chr15:16,750,980...16,758,500

butirosin and neomycin biosynthetic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Gck

glucokinase

rno:00524

NCBI chr14:80,785,060...80,829,842
Ensembl chr14:80,785,060...80,826,995

Hk1

hexokinase 1

rno:00524

NCBI chr20:30,230,488...30,332,099
Ensembl chr20:30,230,486...30,332,131

Hk2

hexokinase 2

rno:00524

NCBI chr 4:115,234,509...115,283,530
Ensembl chr 4:115,234,509...115,283,530

Hk3

hexokinase 3

rno:00524

NCBI chr17:9,596,950...9,614,847
Ensembl chr17:9,599,865...9,614,863

C21-steroid hormone biosynthetic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cyp11b2

cytochrome P450, family 11, subfamily b, polypeptide 2

RGD

PMID:11832364

RGD:727991

NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004

Cyp11b3

cytochrome P450, family 11, subfamily b, polypeptide 3

RGD

PMID:7829497

RGD:1299585

NCBI chr 7:106,808,559...106,814,048
Ensembl chr 7:106,808,559...106,814,048

caffeine metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cyp1a2

cytochrome P450, family 1, subfamily a, polypeptide 2

rno:00232

NCBI chr 8:58,075,367...58,082,255
Ensembl chr 8:58,075,367...58,082,312

Cyp2a1

cytochrome P450, family 2, subfamily a, polypeptide 1

rno:00232

NCBI chr 1:82,231,611...82,244,887
Ensembl chr 1:82,231,611...82,244,887

Cyp2a2

cytochrome P450, family 2, subfamily a, polypeptide 2

rno:00232

NCBI chr 1:82,263,833...82,289,487
Ensembl chr 1:82,263,833...82,289,487

Cyp2a3

cytochrome P450, family 2, subfamily a, polypeptide 3

rno:00232

NCBI chr 1:82,171,914...82,179,980
Ensembl chr 1:82,169,949...82,179,979

Nat1

N-acetyltransferase 1

rno:00232

NCBI chr16:22,218,217...22,238,516
Ensembl chr16:22,208,194...22,238,520

Nat2

N-acetyltransferase 2

rno:00232

NCBI chr16:22,207,362...22,238,513
Ensembl chr16:22,208,194...22,238,520

Nat3

N-acetyltransferase 3

rno:00232

NCBI chr16:22,149,605...22,175,962
Ensembl chr16:22,150,431...22,151,303

Uox

urate oxidase

rno:00232

NCBI chr 2:235,486,867...235,523,053
Ensembl chr 2:235,440,619...235,523,029

Xdh

xanthine dehydrogenase

rno:00232

NCBI chr 6:21,530,463...21,592,172
Ensembl chr 6:21,530,113...21,592,268

cardiolipin biosynthetic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Crls1

cardiolipin synthase 1

RGD

NCBI chr 3:120,119,822...120,138,674
Ensembl chr 3:120,119,852...120,138,655

Pgs1

phosphatidylglycerophosphate synthase 1

RGD

NCBI chr10:103,214,635...103,250,254
Ensembl chr10:103,214,646...103,250,254

Ptpmt1

protein tyrosine phosphatase, mitochondrial 1

RGD

NCBI chr 3:76,889,922...76,899,427
Ensembl chr 3:76,889,922...76,899,427

Tamm41

TAM41 mitochondrial translocator assembly and maintenance homolog

RGD

NCBI chr 4:148,070,388...148,103,728
Ensembl chr 4:148,018,463...148,103,694

cardiolipin metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ckmt1

creatine kinase, mitochondrial 1

RGD

NCBI chr 3:108,329,859...108,335,760
Ensembl chr 3:108,330,705...108,335,758

Cycs

cytochrome c, somatic

RGD

NCBI chr 4:79,651,894...79,653,994
Ensembl chr 4:79,651,378...79,654,054
Ensembl chr18:79,651,378...79,654,054

Nme4

NME/NM23 nucleoside diphosphate kinase 4

RGD

NCBI chr10:15,114,624...15,118,479
Ensembl chr10:15,002,926...15,118,479

Plscr3

phospholipid scramblase 3

RGD

NCBI chr10:54,566,556...54,573,240
Ensembl chr10:54,566,873...54,578,709

Tafazzin

tafazzin, phospholipid-lysophospholipid transacylase

RGD

NCBI chr X:152,065,539...152,076,178
Ensembl chr X:152,065,609...152,074,001

carnitine biosynthetic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

aldehyde dehydrogenase 9 family, member A1

SMP:00465

NCBI chr13:79,505,738...79,522,539
Ensembl chr13:79,505,695...79,540,568

Bbox1

gamma-butyrobetaine hydroxylase 1

SMP:00465

NCBI chr 3:96,822,654...96,871,786
Ensembl chr 3:96,822,655...96,871,458

Setd7

SET domain containing 7, histone lysine methyltransferase

SMP:00465

NCBI chr 2:135,562,683...135,605,468
Ensembl chr 2:135,562,683...135,605,468

Shmt1

serine hydroxymethyltransferase 1

SMP:00465

NCBI chr10:45,468,698...45,490,833
Ensembl chr10:45,468,700...45,497,820

Tmlhe

trimethyllysine hydroxylase, epsilon

SMP:00465

NCBI chr20:91,234...138,942
Ensembl chr20:91,272...140,386

catecholamine biosynthetic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dbh

dopamine beta-hydroxylase

SMP:00012

NCBI chr 3:10,488,260...10,505,245
Ensembl chr 3:10,488,260...10,505,248

Ddc

dopa decarboxylase

SMP:00012

NCBI chr14:86,378,685...86,469,189
Ensembl chr14:86,378,685...86,469,208

Pnmt

phenylethanolamine-N-methyltransferase

SMP:00012

NCBI chr10:83,383,019...83,386,557
Ensembl chr10:83,384,923...83,386,556

tyrosine hydroxylase

SMP:00012

NCBI chr 1:198,071,500...198,078,832
Ensembl chr 1:198,071,503...198,109,767

cholesterol biosynthetic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Acat2

acetyl-CoA acetyltransferase 2

SMPDB
RGD

PMID:16876788 PMID:7581240 PMID:12668600

SMP:00023, RGD:2316857

NCBI chr 1:47,695,833...47,713,879
Ensembl chr 1:47,695,788...47,752,821

Cyp51

cytochrome P450, family 51

ISO
IDA

SMPDB
RGD

SMP:00023, RGD:2316857, RGD:2316902, RGD:2316868

NCBI chr 4:30,036,956...30,055,410
Ensembl chr 4:30,036,865...30,055,410
Ensembl chr 6:30,036,865...30,055,410

Dhcr24

24-dehydrocholesterol reductase

SMPDB
RGD

PMID:16876788 PMID:9831636 PMID:12668600

SMP:00023, RGD:2316857, RGD:2316868

NCBI chr 5:121,344,552...121,371,124
Ensembl chr 5:121,344,575...121,371,137

Dhcr7

7-dehydrocholesterol reductase

ISO
IMP

RGD

RGD:2316857, RGD:2316918, RGD:2316868

NCBI chr 1:199,015,081...199,031,055
Ensembl chr 1:199,015,081...199,031,055

Ebp

EBP, cholestenol delta-isomerase

SMPDB
RGD

PMID:16440058 PMID:16876788

SMP:00023, RGD:2316857, RGD:2316868

NCBI chr X:14,299,427...14,305,826
Ensembl chr X:14,299,448...14,305,826

Fdft1

farnesyl diphosphate farnesyl transferase 1

IMP
ISO

SMPDB
RGD

SMP:00023, RGD:1626611, RGD:2316857

NCBI chr15:37,412,143...37,440,198
Ensembl chr15:37,412,146...37,440,287

Fdps

farnesyl diphosphate synthase

SMPDB
RGD

SMP:00023, RGD:2316857

NCBI chr 2:174,497,402...174,507,031
Ensembl chr 2:174,486,665...174,507,776

Ggps1

geranylgeranyl diphosphate synthase 1

SMP:00023

NCBI chr17:51,263,262...51,282,471
Ensembl chr17:51,263,263...51,276,220

Hmgcr

3-hydroxy-3-methylglutaryl-CoA reductase

SMPDB
RGD

SMP:00023, RGD:2316857

NCBI chr 2:27,997,523...28,018,983
Ensembl chr 2:27,997,525...28,019,703

Hmgcs1

3-hydroxy-3-methylglutaryl-CoA synthase 1

SMPDB
RGD

SMP:00023, RGD:2316857

NCBI chr 2:51,649,368...51,667,100
Ensembl chr 2:51,649,497...51,667,100

Hsd17b7

hydroxysteroid (17-beta) dehydrogenase 7

SMP:00023

NCBI chr13:82,170,079...82,190,018
Ensembl chr13:82,173,179...82,190,017

Idi1

isopentenyl-diphosphate delta isomerase 1

SMPDB
RGD

SMP:00023, RGD:2316857

NCBI chr17:61,629,592...61,637,357
Ensembl chr17:61,629,594...61,637,357

Lbr

lamin B receptor

RGD

RGD:2316857, RGD:2316868

NCBI chr13:93,539,386...93,564,026
Ensembl chr13:93,538,920...93,564,017

Lipa

lipase A, lysosomal acid type

PMID:16440058 PMID:1429550 PMID:16876788

SMP:00023

NCBI chr 1:232,024,351...232,057,735
Ensembl chr 1:232,024,356...232,057,633

Lss

lanosterol synthase

IMP
ISO
IDA

SMPDB
RGD

SMP:00023, RGD:1626611, RGD:2316919, RGD:2316857

NCBI chr20:12,091,138...12,118,858
Ensembl chr20:12,092,774...12,118,762

Msmo1

methylsterol monooxygenase 1

SMP:00023

NCBI chr16:24,980,680...24,997,927
Ensembl chr16:24,980,697...24,998,016

Mvd

mevalonate diphosphate decarboxylase

SMPDB
RGD

SMP:00023, RGD:2316857

NCBI chr19:50,496,366...50,506,429
Ensembl chr19:50,496,367...50,507,971

Mvk

mevalonate kinase

SMPDB
RGD

SMP:00023, RGD:2316857

NCBI chr12:42,141,391...42,158,893
Ensembl chr12:42,141,384...42,158,882

Nsdhl

NAD(P) dependent steroid dehydrogenase-like

SMPDB
RGD

SMP:00023, RGD:2316857, RGD:2316868

NCBI chr X:150,775,034...150,807,161
Ensembl chr X:150,775,080...150,807,142

Pmvk

phosphomevalonate kinase

SMPDB
RGD

PMID:16876788 PMID:7961720 PMID:12668600

SMP:00023, RGD:2316857

NCBI chr 2:174,876,586...174,886,365
Ensembl chr 2:174,876,657...174,886,364

Sc5d

sterol-C5-desaturase

ISO
IDA

SMPDB
RGD

SMP:00023, RGD:2316857, RGD:2316911, RGD:2316868

NCBI chr 8:42,629,649...42,641,257
Ensembl chr 8:42,632,672...42,641,273

Soat1

sterol O-acyltransferase 1

SMP:00023

NCBI chr13:68,552,274...68,597,529
Ensembl chr13:68,552,317...68,597,494

Sqle

squalene epoxidase

SMPDB
RGD

SMP:00023, RGD:2316857

NCBI chr 7:90,867,973...90,883,623
Ensembl chr 7:90,868,011...90,883,618

Tm7sf2

transmembrane 7 superfamily member 2

SMP:00023

NCBI chr 1:203,355,930...203,360,287
Ensembl chr 1:203,355,931...203,360,270

choline metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ahcy

adenosylhomocysteinase

SMP:00123

NCBI chr 3:143,569,134...143,584,359
Ensembl chr 3:143,569,094...143,584,393

aldehyde dehydrogenase 7 family, member A1

SMP:00123

NCBI chr18:50,003,242...50,042,193
Ensembl chr18:50,009,934...50,042,193

Bhmt

betaine-homocysteine S-methyltransferase

SMP:00123

NCBI chr 2:24,859,871...24,879,449
Ensembl chr 2:24,859,873...24,879,742

Chdh

choline dehydrogenase

SMP:00123

NCBI chr16:5,194,269...5,225,541
Ensembl chr16:5,194,269...5,225,537

Mat2a

methionine adenosyltransferase 2A

SMP:00123

NCBI chr 4:104,489,877...104,495,447
Ensembl chr 4:104,488,466...104,495,493

Mat2b

methionine adenosyltransferase 2 non-catalytic beta subunit

SMP:00123

NCBI chr10:25,106,928...25,122,982
Ensembl chr10:25,106,930...25,122,777

5-methyltetrahydrofolate-homocysteine methyltransferase

SMP:00123

NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822

Pemt

phosphatidylethanolamine N-methyltransferase

SMP:00123

NCBI chr10:44,775,910...44,849,990
Ensembl chr10:44,775,911...44,850,013

Sardh

sarcosine dehydrogenase

RGD

PMID:9839943

RGD:634034

NCBI chr 3:10,510,553...10,575,342
Ensembl chr 3:10,510,553...10,573,874

chondroitin sulfate biosynthetic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

B3galt6

Beta-1,3-galactosyltransferase 6

rno:00532

NCBI chr 5:166,584,202...166,586,338
Ensembl chr 5:166,584,202...166,586,338

B3gat1

beta-1,3-glucuronyltransferase 1

rno:00532

NCBI chr 8:25,087,123...25,114,692
Ensembl chr 8:25,087,547...25,113,395

B3gat2

beta-1,3-glucuronyltransferase 2

rno:00532

NCBI chr 9:26,167,174...26,250,153
Ensembl chr 9:26,167,174...26,250,153

B3gat3

beta-1,3-glucuronyltransferase 3

rno:00532

NCBI chr 1:205,817,374...205,823,928
Ensembl chr 1:205,817,378...205,837,807

B4galt7

beta-1,4-galactosyltransferase 7

rno:00532

NCBI chr17:9,018,514...9,027,591
Ensembl chr17:9,018,935...9,027,573

Chpf

chondroitin polymerizing factor

rno:00532

NCBI chr 9:76,963,178...76,967,878
Ensembl chr 9:76,963,184...76,967,878

Chst11

carbohydrate sulfotransferase 11

rno:00532

NCBI chr 7:20,524,535...20,743,008
Ensembl chr 7:20,528,100...20,743,111

Chst12

carbohydrate sulfotransferase 12

rno:00532

NCBI chr12:14,110,631...14,129,099
Ensembl chr12:14,110,393...14,129,057

Chst13

carbohydrate sulfotransferase 13

rno:00532

NCBI chr 4:122,824,022...122,837,940
Ensembl chr 4:122,824,022...122,838,019

Chst14

carbohydrate sulfotransferase 14

rno:00532

NCBI chr 3:105,916,481...105,918,538
Ensembl chr 3:105,916,466...105,918,548

Chst15

carbohydrate sulfotransferase 15

rno:00532

NCBI chr 1:187,028,860...187,107,908
Ensembl chr 1:187,028,970...187,107,707

Chst3

carbohydrate sulfotransferase 3

rno:00532

NCBI chr20:28,114,386...28,152,046
Ensembl chr20:28,114,404...28,121,807

Chst7

carbohydrate sulfotransferase 7

rno:00532

NCBI chr X:2,396,260...2,432,828
Ensembl chr X:2,393,874...2,432,840

Chsy1

chondroitin sulfate synthase 1

rno:00532

NCBI chr 1:119,689,626...119,750,711
Ensembl chr 1:119,686,350...119,750,601

Chsy3

chondroitin sulfate synthase 3

rno:00532

NCBI chr18:52,644,356...52,901,257
Ensembl chr18:52,644,461...52,898,098

Csgalnact1

chondroitin sulfate N-acetylgalactosaminyltransferase 1

rno:00532

NCBI chr16:20,995,210...21,330,586
Ensembl chr16:21,235,784...21,330,319

Csgalnact2

chondroitin sulfate N-acetylgalactosaminyltransferase 2

rno:00532

NCBI chr 4:151,271,774...151,308,856
Ensembl chr 4:151,277,645...151,308,839

Dse

dermatan sulfate epimerase

rno:00532

NCBI chr20:26,118,194...26,196,889
Ensembl chr20:26,118,196...26,196,992

Ust

uronyl-2-sulfotransferase

rno:00532

NCBI chr 1:2,666,983...2,962,276
Ensembl chr 1:2,669,592...2,962,044

Xylt1

xylosyltransferase 1

rno:00532

NCBI chr 1:171,643,925...171,929,774
Ensembl chr 1:171,643,925...171,926,783

Xylt2

xylosyltransferase 2

rno:00532

NCBI chr10:79,605,910...79,619,482
Ensembl chr10:79,606,007...79,619,391

citric acid cycle pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Acly

ATP citrate lyase

rno:00020

NCBI chr10:85,412,045...85,464,253
Ensembl chr10:85,412,049...85,463,320

Aco1

aconitase 1

rno:00020

NCBI chr 5:55,259,841...55,315,872
Ensembl chr 5:55,259,827...55,316,391

Aco2

aconitase 2

IEA
ISO
IDA

KEGG
SMPDB
RGD

PMID:9712727

SMP:00057 rno:00020, RGD:2306877

NCBI chr 7:113,385,677...113,428,794
Ensembl chr 7:113,385,646...113,428,261

citrate synthase

IEA
ISO
IDA

KEGG
SMPDB
RGD

PMID:9712727

SMP:00057 rno:00020, RGD:2306877

NCBI chr 7:758,074...791,421
Ensembl chr 7:758,345...791,421

Dlat

dihydrolipoamide S-acetyltransferase

SMP:00057 rno:00020

NCBI chr 8:50,979,151...51,004,435
Ensembl chr 8:50,978,051...51,004,479
Ensembl chr 1:50,978,051...51,004,479

Dld

dihydrolipoamide dehydrogenase

SMPDB
KEGG
RGD

PMID:10672230

SMP:00057 rno:00020, RGD:2306878

NCBI chr 6:47,904,153...47,924,814
Ensembl chr 6:47,903,914...47,924,795

Dlst

dihydrolipoamide S-succinyltransferase

SMPDB
KEGG
RGD

PMID:10672230

SMP:00057 rno:00020, RGD:2306878

NCBI chr 6:104,758,511...104,783,296
Ensembl chr 6:104,758,631...104,783,296

fumarate hydratase

SMP:00057

NCBI chr13:87,524,331...87,550,215
Ensembl chr13:87,524,337...87,550,266

Idh1

isocitrate dehydrogenase (NADP(+)) 1

rno:00020

NCBI chr 9:66,534,146...66,563,703
Ensembl chr 9:66,534,146...66,563,708

Idh2

isocitrate dehydrogenase (NADP(+)) 2

rno:00020

NCBI chr 1:134,038,644...134,057,969
Ensembl chr 1:134,029,772...134,058,025

Idh3a

isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha

SMP:00057 rno:00020

NCBI chr 8:54,971,694...54,991,085
Ensembl chr 8:54,971,740...54,991,084

Idh3b

isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit beta

SMP:00057 rno:00020

NCBI chr 3:117,481,845...117,486,909
Ensembl chr 3:117,481,845...117,486,982

Idh3g

isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma

SMP:00057 rno:00020

NCBI chr X:151,515,244...151,524,175
Ensembl chr X:151,515,247...151,524,171

Mdh1

malate dehydrogenase 1

rno:00020

NCBI chr14:95,630,625...95,645,920
Ensembl chr14:95,630,306...95,645,925

Mdh2

malate dehydrogenase 2

SMP:00057 rno:00020

NCBI chr12:20,894,269...20,907,225
Ensembl chr12:20,894,262...20,907,271

Mpc1

mitochondrial pyruvate carrier 1

PMID:9712727 PMID:10672230

SMP:00057

NCBI chr 1:52,437,745...52,449,399
Ensembl chr 1:52,437,741...52,449,400

Ogdh

oxoglutarate dehydrogenase

IDA
ISO
IEA

SMPDB
KEGG
RGD

SMP:00057 rno:00020, RGD:2306877, RGD:2306878

NCBI chr14:81,150,021...81,217,479
Ensembl chr14:81,150,091...81,217,479

Ogdhl

oxoglutarate dehydrogenase L

rno:00020

NCBI chr16:7,578,343...7,604,385
Ensembl chr16:7,578,367...7,604,386

pyruvate carboxylase

SMP:00057 rno:00020

NCBI chr 1:201,799,374...201,898,412
Ensembl chr 1:201,804,267...201,898,380

Pck1

phosphoenolpyruvate carboxykinase 1

rno:00020

NCBI chr 3:161,930,256...161,936,205
Ensembl chr 3:161,930,256...161,936,191

Pck2

phosphoenolpyruvate carboxykinase 2 (mitochondrial)

rno:00020

NCBI chr15:29,027,891...29,036,729
Ensembl chr15:29,027,894...29,037,283

Pdha1

pyruvate dehydrogenase E1 subunit alpha 1

SMP:00057 rno:00020

NCBI chr X:34,700,481...34,714,309
Ensembl chr X:34,700,409...34,714,311

Pdha2

pyruvate dehydrogenase E1 subunit alpha 2

rno:00020

NCBI chr 2:229,872,300...229,873,848

Pdhb

pyruvate dehydrogenase E1 subunit beta

SMP:00057 rno:00020

NCBI chr15:16,752,561...16,758,503
Ensembl chr15:16,750,980...16,758,500

Sdha

succinate dehydrogenase complex flavoprotein subunit A

SMPDB
KEGG
RGD

SMP:00057 rno:00020, RGD:2306881

NCBI chr 1:28,935,965...28,960,936
Ensembl chr 1:28,940,164...28,961,535

Sdhb

succinate dehydrogenase complex iron sulfur subunit B

SMPDB
KEGG
RGD

SMP:00057 rno:00020, RGD:2306881

NCBI chr 5:153,264,906...153,285,570
Ensembl chr 5:153,264,899...153,314,293

Sdhc

succinate dehydrogenase complex subunit C

SMPDB
KEGG
RGD

SMP:00057 rno:00020, RGD:2306881

NCBI chr13:83,544,652...83,565,560
Ensembl chr13:83,544,652...83,566,253

Sdhd

succinate dehydrogenase complex subunit D

SMPDB
KEGG
RGD

SMP:00057 rno:00020, RGD:2306881

NCBI chr 8:50,944,702...50,954,298
Ensembl chr 8:50,944,704...50,954,238

Sucla2

succinate-CoA ligase ADP-forming subunit beta

IDA
IEA

KEGG
RGD

PMID:17403370

rno:00020, RGD:2306915

NCBI chr15:48,752,356...48,805,495
Ensembl chr15:48,752,312...48,805,138

Suclg1

succinate-CoA ligase GDP/ADP-forming subunit alpha

IDA
ISO
IEA

SMPDB
KEGG
RGD

PMID:17403370

SMP:00057 rno:00020, RGD:2306915

NCBI chr 4:105,308,236...105,337,595
Ensembl chr 4:105,308,039...105,337,600

Suclg2

succinate-CoA ligase GDP-forming subunit beta

IDA
ISO
IEA

SMPDB
KEGG
RGD

PMID:17403370

SMP:00057 rno:00020, RGD:2306915

NCBI chr 4:128,067,031...128,337,146
Ensembl chr 4:128,067,033...128,337,170

cortisol biosynthetic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cyp11a1

cytochrome P450, family 11, subfamily a, polypeptide 1

RGD

NCBI chr 8:58,422,807...58,434,342
Ensembl chr 8:58,404,669...58,434,338

Cyp11b1

cytochrome P450, family 11, subfamily b, polypeptide 1

RGD

NCBI chr 7:106,772,597...106,780,536
Ensembl chr 7:106,718,274...106,779,278

Cyp11b2

cytochrome P450, family 11, subfamily b, polypeptide 2

NCBI chr 7:106,838,590...106,845,004
Ensembl chr 7:106,838,590...106,845,004

Cyp17a1

cytochrome P450, family 17, subfamily a, polypeptide 1

RGD

NCBI chr 1:245,535,462...245,543,148
Ensembl chr 1:245,535,462...245,541,573

Cyp21a1

cytochrome P450, family 21, subfamily a, polypeptide 1

RGD

NCBI chr20:4,020,217...4,026,923
Ensembl chr20:4,023,767...4,026,923

ferredoxin 1

RGD

NCBI chr 8:52,268,536...52,287,344
Ensembl chr 8:52,268,536...52,287,414

ferredoxin reductase

RGD

NCBI chr10:100,507,863...100,516,649
Ensembl chr10:100,507,865...100,516,658

Hsd3b1

hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1

RGD

NCBI chr 2:186,169,864...186,175,984
Ensembl chr 2:186,169,863...186,175,999

Hsd3b2

hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2

RGD

NCBI chr 2:186,095,897...186,105,354
Ensembl chr 2:186,095,897...186,101,852

Por

cytochrome p450 oxidoreductase

RGD

NCBI chr12:20,951,058...20,999,198
Ensembl chr12:20,951,058...20,999,245

Star

steroidogenic acute regulatory protein

RGD

PMID:18821018

RGD:2325883

NCBI chr16:66,267,094...66,274,368
Ensembl chr16:66,264,807...66,271,672

creatine metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ckm

creatine kinase, M-type

RGD

PMID:12069495

RGD:1359082

NCBI chr 1:79,061,390...79,071,721
Ensembl chr 1:79,061,456...79,071,720

Gamt

guanidinoacetate N-methyltransferase

RGD

PMID:12069495

RGD:1359082

NCBI chr 7:9,448,590...9,451,413
Ensembl chr 7:9,448,628...9,451,778

Gatm

glycine amidinotransferase

RGD

PMID:8021264

RGD:70746

NCBI chr 3:109,658,919...109,675,508
Ensembl chr 3:109,658,951...109,684,129

Slc6a8

solute carrier family 6 member 8

RGD

PMID:12069495

RGD:1359082

NCBI chr X:151,384,675...151,393,979
Ensembl chr X:151,384,675...151,393,979

cyanoamino acid metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Gba3

glucosylceramidase beta 3

rno:00460

NCBI chr14:60,574,974...60,721,411
Ensembl chr14:60,574,976...60,721,653

Ggt1

gamma-glutamyltransferase 1

rno:00460

NCBI chr20:13,074,695...13,104,095
Ensembl chr20:13,074,700...13,108,442

Ggt5

gamma-glutamyltransferase 5

rno:00460

NCBI chr20:13,043,255...13,071,523
Ensembl chr20:13,043,257...13,071,450

Ggt6

gamma-glutamyl transferase 6

rno:00460

NCBI chr10:57,051,977...57,054,900
Ensembl chr10:57,051,825...57,067,260

Ggt7

gamma-glutamyltransferase 7

rno:00460

NCBI chr 3:143,978,073...144,004,597
Ensembl chr 3:143,978,082...144,001,492

Shmt1

serine hydroxymethyltransferase 1

rno:00460

NCBI chr10:45,468,698...45,490,833
Ensembl chr10:45,468,700...45,497,820

Shmt2

serine hydroxymethyltransferase 2

rno:00460

NCBI chr 7:63,358,961...63,364,293
Ensembl chr 7:63,358,961...63,364,236

cyclooxygenase mediated pathway of arachidonic acid metabolism

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

annexin A1

RGD

NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343

Mknk1

MAPK interacting serine/threonine kinase 1

RGD

PMID:18761105

RGD:8552898

NCBI chr 5:129,318,128...129,357,641
Ensembl chr 5:129,318,170...129,357,639

Pla2g4a

phospholipase A2 group 4A

PMID:22679221 PMID:18761105

RGD

RGD:8552712, RGD:8552898

NCBI chr13:61,877,818...62,022,261
Ensembl chr13:61,877,813...62,022,266

Ptgs1

prostaglandin-endoperoxide synthase 1

PMID:23063076 PMID:22679221

RGD

RGD:8552701, RGD:8552712

NCBI chr 3:19,584,015...19,605,589
Ensembl chr 3:19,584,015...19,605,586

Ptgs2

prostaglandin-endoperoxide synthase 2

PMID:23063076 PMID:22679221

RGD

RGD:8552701, RGD:8552712

NCBI chr13:62,163,936...62,172,193
Ensembl chr13:62,163,932...62,172,188

vimentin

RGD

NCBI chr17:76,668,701...76,677,186
Ensembl chr17:76,668,647...76,677,187

cysteine and methionine metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Adi1

acireductone dioxygenase 1

rno:00270

NCBI chr 6:45,306,885...45,313,847
Ensembl chr 6:45,306,841...45,313,842

Ahcy

adenosylhomocysteinase

rno:00270

NCBI chr 3:143,569,134...143,584,359
Ensembl chr 3:143,569,094...143,584,393

Ahcyl1

adenosylhomocysteinase-like 1

rno:00270

NCBI chr 2:195,294,149...195,328,586
Ensembl chr 2:195,294,153...195,345,815

Ahcyl2

adenosylhomocysteinase-like 2

rno:00270

NCBI chr 4:58,381,290...58,531,061
Ensembl chr 4:58,381,218...58,531,060

Amd1

adenosylmethionine decarboxylase 1

rno:00270

NCBI chr20:43,695,783...43,711,476
Ensembl chr20:43,697,237...43,711,476

Apip

APAF1 interacting protein

rno:00270

NCBI chr 3:89,431,964...89,458,000
Ensembl chr 3:89,432,037...89,458,340

Bhmt

betaine-homocysteine S-methyltransferase

rno:00270

NCBI chr 2:24,859,871...24,879,449
Ensembl chr 2:24,859,873...24,879,742

Cbs

cystathionine beta synthase

rno:00270

NCBI chr20:9,708,089...9,732,623
Ensembl chr20:9,708,090...9,732,764

Cdo1

cysteine dioxygenase type 1

rno:00270

NCBI chr18:39,432,473...39,447,253
Ensembl chr18:39,432,474...39,447,296

Cth

cystathionine gamma-lyase

rno:00270

NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234

Dnmt1

DNA methyltransferase 1

rno:00270

NCBI chr 8:19,440,611...19,486,659
Ensembl chr 8:19,440,611...19,486,659

Dnmt3a

DNA methyltransferase 3 alpha

rno:00270

NCBI chr 6:26,791,517...26,902,161
Ensembl chr 6:26,822,609...26,896,687

Dnmt3b

DNA methyltransferase 3 beta

rno:00270

NCBI chr 3:142,130,588...142,169,128
Ensembl chr 3:142,130,592...142,169,124

Dnmt3l

DNA methyltransferase 3 like

rno:00270

NCBI chr20:10,614,933...10,629,337
Ensembl chr20:10,614,934...10,629,516

Enoph1

enolase-phosphatase 1

rno:00270

NCBI chr14:9,531,336...9,557,797
Ensembl chr14:9,531,339...9,569,273

glutamic-oxaloacetic transaminase 1

rno:00270

NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633

Got2

glutamic-oxaloacetic transaminase 2

rno:00270

NCBI chr19:9,174,304...9,199,995
Ensembl chr19:9,174,311...9,199,994

Lao1

L-amino acid oxidase 1

rno:00270

NCBI chr 5:132,573,698...132,583,591
Ensembl chr 5:132,573,698...132,583,582

Ldha

lactate dehydrogenase A

rno:00270

NCBI chr 1:97,371,823...97,381,247
Ensembl chr 1:97,366,021...97,433,472

Ldhal1

lactate dehydrogenase A like 1

rno:00270

NCBI chr 8:30,363,220...30,364,836

Ldhal6b

lactate dehydrogenase A-like 6B

rno:00270

NCBI chr 1:45,997,845...45,999,268
Ensembl chr 1:45,991,991...45,999,272

Ldhb

lactate dehydrogenase B

rno:00270

NCBI chr 4:175,428,382...175,446,403
Ensembl chr 4:175,428,385...175,446,403

Ldhc

lactate dehydrogenase C

rno:00270

NCBI chr 1:97,385,984...97,403,382
Ensembl chr 1:97,382,379...97,403,378

Mat1a

methionine adenosyltransferase 1A

rno:00270

NCBI chr16:16,983,084...17,001,284
Ensembl chr16:16,983,022...17,001,274

Mat2a

methionine adenosyltransferase 2A

rno:00270

NCBI chr 4:104,489,877...104,495,447
Ensembl chr 4:104,488,466...104,495,493

Mat2b

methionine adenosyltransferase 2 non-catalytic beta subunit

rno:00270

NCBI chr10:25,106,928...25,122,982
Ensembl chr10:25,106,930...25,122,777

Mpst

mercaptopyruvate sulfurtransferase

rno:00270

NCBI chr 7:109,955,581...109,963,155
Ensembl chr 7:109,955,675...109,963,141

Mri1

methylthioribose-1-phosphate isomerase 1

rno:00270

NCBI chr19:23,907,327...23,913,721
Ensembl chr19:23,907,335...23,913,320

Mtap

methylthioadenosine phosphorylase

rno:00270

NCBI chr 5:103,874,460...103,920,684
Ensembl chr 5:103,873,020...103,939,406

5-methyltetrahydrofolate-homocysteine methyltransferase

rno:00270

NCBI chr17:58,219,998...58,308,560
Ensembl chr17:58,220,071...58,304,822

Sds

serine dehydratase

rno:00270

NCBI chr12:36,083,226...36,090,540
Ensembl chr12:36,083,229...36,088,203

Srm

spermidine synthase

rno:00270

NCBI chr 5:159,025,875...159,029,076
Ensembl chr 5:159,025,873...159,029,405

Tat

tyrosine aminotransferase

rno:00270

NCBI chr19:37,947,153...37,957,717
Ensembl chr19:37,947,112...37,958,031

Trdmt1

tRNA aspartic acid methyltransferase 1

rno:00270

NCBI chr17:76,601,966...76,646,104
Ensembl chr17:76,610,543...76,645,439

Tst

thiosulfate sulfurtransferase

rno:00270

NCBI chr 7:109,948,061...109,955,378
Ensembl chr 7:109,948,062...109,957,216

cysteine metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cars1

cysteinyl-tRNA synthetase 1

SMP:00013

NCBI chr 1:198,753,689...198,796,016
Ensembl chr 1:198,753,691...198,795,941

Cdo1

cysteine dioxygenase type 1

SMP:00013

NCBI chr18:39,432,473...39,447,253
Ensembl chr18:39,432,474...39,447,296

Cth

cystathionine gamma-lyase

SMP:00013

NCBI chr 2:246,975,888...247,002,234
Ensembl chr 2:246,975,894...247,002,234

Ctns

cystinosin, lysosomal cystine transporter

SMP:00013

NCBI chr10:57,801,551...57,817,213
Ensembl chr10:57,801,456...57,817,120

Gclc

glutamate-cysteine ligase, catalytic subunit

SMP:00013

NCBI chr 8:78,629,899...78,668,547
Ensembl chr 8:78,630,127...78,668,544

Gclm

glutamate cysteine ligase, modifier subunit

SMP:00013

NCBI chr 2:210,347,482...210,367,537
Ensembl chr 2:210,347,482...210,367,535

glutamic-oxaloacetic transaminase 1

SMP:00013

NCBI chr 1:242,357,293...242,381,535
Ensembl chr 1:242,357,306...242,380,633

Mpst

mercaptopyruvate sulfurtransferase

SMP:00013

NCBI chr 7:109,955,581...109,963,155
Ensembl chr 7:109,955,675...109,963,141

cytochrome P450 monooxygenase mediated pathway of arachidonic acid metabolism

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cyp2b12

cytochrome P450, family 2, subfamily b, polypeptide 12

RGD

PMID:9535921

RGD:2301469

NCBI chr 1:82,007,609...82,019,409
Ensembl chr 1:82,007,609...82,080,480

Cyp4a1

cytochrome P450, family 4, subfamily a, polypeptide 1

RGD

PMID:12857783

RGD:1625451

NCBI chr 5:129,123,323...129,137,464
Ensembl chr 5:129,123,336...129,137,464

Cyp4a2

cytochrome P450, family 4, subfamily a, polypeptide 2

RGD

PMID:12857783

RGD:1625451

NCBI chr 5:128,922,355...128,934,188
Ensembl chr 5:128,923,615...128,934,165

Cyp4a3

cytochrome P450, family 4, subfamily a, polypeptide 3

RGD

PMID:12857783

RGD:1625451

NCBI chr 5:129,097,571...129,115,488
Ensembl chr 5:129,097,926...129,115,463

Cyp4f1

cytochrome P450, family 4, subfamily f, polypeptide 1

RGD

PMID:14634044

RGD:2301710

NCBI chr 7:12,010,850...12,022,497
Ensembl chr 7:12,010,852...12,022,046

cytosolic iron-sulfur cluster protein assembly pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Ciao1

cytosolic iron-sulfur assembly component 1

RGD

NCBI chr 3:114,458,671...114,465,928
Ensembl chr 3:114,458,655...114,467,009

Ciao2a

cytosolic iron-sulfur assembly component 2A

RGD

NCBI chr 8:66,670,533...66,682,455
Ensembl chr 8:66,670,483...66,682,455

Ciao2b

cytosolic iron-sulfur assembly component 2B

RGD

NCBI chr19:344,194...346,068
Ensembl chr19:344,203...346,068

Ciao3

cytosolic iron-sulfur assembly component 3

RGD

NCBI chr10:14,795,888...14,804,953
Ensembl chr10:14,795,961...14,804,950

Ciapin1

cytokine induced apoptosis inhibitor 1

RGD

NCBI chr19:10,179,963...10,195,511
Ensembl chr19:10,180,100...10,195,503

Mms19

MMS19 homolog, cytosolic iron-sulfur assembly component

RGD

NCBI chr 1:240,757,279...240,794,291
Ensembl chr 1:240,757,282...240,794,288

Ndor1

NADPH dependent diflavin oxidoreductase 1

RGD

NCBI chr 3:8,062,629...8,070,873
Ensembl chr 3:8,062,630...8,070,860

Nubp1

NUBP iron-sulfur cluster assembly factor 1

RGD

NCBI chr10:5,259,328...5,270,848

Nubp2

NUBP iron-sulfur cluster assembly factor 2

RGD

NCBI chr10:13,903,224...13,906,928
Ensembl chr10:13,903,224...13,906,969

D-arginine and D-ornithine metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Dao

D-amino-acid oxidase

rno:00472

NCBI chr12:42,592,342...42,613,046
Ensembl chr12:42,592,343...42,612,741

D-glutamine and D-glutamate metabolic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Gls

glutaminase

rno:00471

NCBI chr 9:49,344,616...49,416,900
Ensembl chr 9:49,344,781...49,416,900

Gls2

glutaminase 2

rno:00471

NCBI chr 7:617,252...633,424
Ensembl chr 7:617,288...633,426

Glud1

glutamate dehydrogenase 1

rno:00471

NCBI chr16:9,640,312...9,673,961
Ensembl chr16:9,640,312...9,673,957

de novo nicotinamide adenine dinucleotide biosynthetic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

NAD synthetase 1

RGD

NCBI chr 1:198,981,559...199,009,853
Ensembl chr 1:198,981,604...199,009,869

Nmnat1

nicotinamide nucleotide adenylyltransferase 1

RGD

NCBI chr 5:159,910,242...159,928,201
Ensembl chr 5:159,910,242...159,928,180

Nmnat2

nicotinamide nucleotide adenylyltransferase 2

RGD

NCBI chr13:65,105,950...65,277,350
Ensembl chr13:65,105,950...65,278,484

Nmnat3

nicotinamide nucleotide adenylyltransferase 3

RGD

NCBI chr 8:98,892,168...99,003,912
Ensembl chr 8:98,873,398...99,020,645

Qprt

quinolinate phosphoribosyltransferase

RGD

NCBI chr 1:181,718,189...181,733,486
Ensembl chr 1:181,718,190...181,733,486

de novo purine biosynthetic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Adsl

adenylosuccinate lyase

RGD

NCBI chr 7:112,479,256...112,503,439
Ensembl chr 7:112,479,271...112,503,760

Adss1

adenylosuccinate synthase 1

RGD

PMID:10218106

RGD:5143930

NCBI chr 6:131,679,795...131,702,012
Ensembl chr 6:131,679,701...131,701,998

Adss2

adenylosuccinate synthase 2

PMID:9332377 PMID:20005278

RGD

PMID:10218106

RGD:5143930

NCBI chr13:89,769,240...89,799,577
Ensembl chr13:89,769,244...89,799,604

adenylate kinase 1

RGD

NCBI chr 3:15,912,431...15,923,045
Ensembl chr 3:15,912,485...15,923,041

adenylate kinase 2

RGD

NCBI chr 5:141,308,650...141,364,633
Ensembl chr 5:141,346,063...141,364,632

adenylate kinase 3

RGD

NCBI chr 1:226,737,472...226,764,647
Ensembl chr 1:226,739,318...226,764,625

adenylate kinase 4

RGD

NCBI chr 5:116,039,222...116,099,064
Ensembl chr 5:116,039,616...116,098,618

adenylate kinase 5

NCBI chr 2:241,397,297...241,581,483
Ensembl chr 2:241,397,297...241,581,458

Atic

5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase

IDA
ISO

RGD

RGD:70804, RGD:5135488

NCBI chr 9:73,164,846...73,184,897
Ensembl chr 9:73,164,846...73,184,889

Gart

phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase

RGD

PMID:12450384

RGD:1547842

NCBI chr11:30,864,896...30,891,125
Ensembl chr11:30,865,889...30,891,125

Gmps

guanine monophosphate synthase

RGD

NCBI chr 2:148,441,369...148,491,908
Ensembl chr 2:148,435,643...148,485,875

Impdh1

inosine monophosphate dehydrogenase 1

RGD

PMID:18295529

RGD:5144133

NCBI chr 4:57,801,842...57,817,434
Ensembl chr 4:57,801,831...57,819,076

Impdh2

inosine monophosphate dehydrogenase 2

RGD

PMID:18295529

RGD:5144133

NCBI chr 8:109,256,705...109,261,365
Ensembl chr 8:109,256,728...109,261,359

Paics

phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase

RGD

PMID:7742366

RGD:633692

NCBI chr14:31,199,086...31,232,731
Ensembl chr14:31,173,541...31,232,635

Ppat

phosphoribosyl pyrophosphate amidotransferase

RGD

NCBI chr14:31,215,741...31,250,144
Ensembl chr14:31,216,165...31,250,144

Prps1

phosphoribosyl pyrophosphate synthetase 1

RGD

NCBI chr X:104,132,139...104,154,191
Ensembl chr X:104,132,141...104,154,187

Prps1l1

phosphoribosyl pyrophosphate synthetase 1-like 1

RGD

NCBI chr 6:51,684,960...51,686,650
Ensembl chr 6:51,684,948...51,687,291

Prps2

phosphoribosyl pyrophosphate synthetase 2

RGD

NCBI chr X:26,975,915...27,013,184
Ensembl chr X:26,976,061...27,013,181

Taf9

TATA-box binding protein associated factor 9

RGD

PMID:16167529

RGD:5490520

NCBI chr 2:31,794,316...31,798,324
Ensembl chr 2:31,794,142...31,798,769

de novo pyrimidine biosynthetic pathway

Symbol

Object Name

Evidence

Notes

Source

PubMed Reference(s)

RGD Reference(s)

Position

Cad

carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase

RGD

PMID:15096496

RGD:5133412

NCBI chr 6:25,292,133...25,315,078
Ensembl chr 6:25,292,133...25,319,861

Cmpk1

cytidine/uridine monophosphate kinase 1

RGD

PMID:12678497

RGD:5133414

NCBI chr 5:128,480,301...128,507,830
Ensembl chr 5:128,480,301...128,507,830

Cmpk2

cytidine/uridine monophosphate kinase 2

RGD

PMID:192455

RGD:5133256

NCBI chr 6:43,073,706...43,085,183
Ensembl chr 6:43,073,796...43,085,183

CTP synthase 1

RGD

NCBI chr 5:134,125,022...134,154,155
Ensembl chr 5:134,125,025...134,154,180

CTP synthase 2

RGD

NCBI chr X:31,645,873...31,786,733
Ensembl chr X:31,645,873...31,786,733

Dhodh

dihydroorotate dehydrogenase

RGD

PMID:15096496

RGD:5133412

NCBI chr19:37,551,858...37,573,327
Ensembl chr19:37,558,177...37,591,654

Nme1

NME/NM23 nucleoside diphosphate kinase 1

RGD

NCBI chr10:78,907,036...78,929,659
Ensembl chr10:78,906,083...78,916,408

Nme2

NME/NM23 nucleoside diphosphate kinase 2

RGD

NCBI chr10:78,898,097...78,903,514
Ensembl chr10:78,897,770...78,903,538
Ensembl chr20:78,897,770...78,903,538

Nme3

NME/NM23 nucleoside diphosphate kinase 3

RGD

NCBI chr10:13,917,309...13,918,415
Ensembl chr10:13,917,403...13,918,359

Nme4

NME/NM23 nucleoside diphosphate kinase 4

RGD

NCBI chr10:15,114,624...15,118,479
Ensembl chr10:15,002,926...15,118,479

Nme6

NME/NM23 nucleoside diphosphate kinase 6

RGD