Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abdominal situs abnormality
go back to main search page
Accession:MP:0031284 term browser browse the term
Definition:an abnormality of the abdominal situs, i.e., of the sidedness of the abdomen and its organs
Synonyms:exact_synonym: Abnormality of abdominal situs
 xref: HP:0011620


show annotations for term's descendants           Sort by:
abdominal situs abnormality term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Megf8 multiple EGF-like-domains 8 IAGP MGI PMID:34486668 NCBI chr 7:25,016,589...25,065,342
Ensembl chr 7:25,016,589...25,065,342 		JBrowse link
G Mosmo modulator of smoothened IAGP MGI PMID:34486668 NCBI chr 7:120,276,814...120,334,079
Ensembl chr 7:120,276,841...120,334,077 		JBrowse link
abdominal situs ambiguus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 1700093K21Rik RIKEN cDNA 1700093K21 gene IEA MGI NCBI chr11:23,466,203...23,471,915
Ensembl chr11:23,466,203...23,471,155 		JBrowse link
G B9d2 B9 protein domain 2 IEA MGI NCBI chr 7:25,380,205...25,385,987
Ensembl chr 7:25,380,205...25,385,983 		JBrowse link
G Ccdc39 coiled-coil domain containing 39 IEA MGI NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459 		JBrowse link
G Cfap53 cilia and flagella associated protein 53 IEA MGI NCBI chr18:74,416,171...74,493,055
Ensembl chr18:74,416,161...74,493,057 		JBrowse link
G Daw1 dynein assembly factor with WDR repeat domains 1 IEA MGI NCBI chr 1:83,136,610...83,188,298
Ensembl chr 1:83,137,473...83,188,295 		JBrowse link
G Dnaaf3 dynein, axonemal assembly factor 3 IEA MGI NCBI chr 7:4,525,932...4,535,487
Ensembl chr 7:4,525,932...4,535,452 		JBrowse link
G Dnaaf4 dynein axonemal assembly factor 4 IEA MGI NCBI chr 9:72,863,574...72,880,971
Ensembl chr 9:72,866,067...72,880,346 		JBrowse link
G Dnah11 dynein, axonemal, heavy chain 11 IEA MGI NCBI chr12:117,841,717...118,162,778
Ensembl chr12:117,841,717...118,162,778 		JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 IEA MGI NCBI chr15:28,155,000...28,472,191
Ensembl chr15:28,203,898...28,472,198 		JBrowse link
G Dnai1 dynein axonemal intermediate chain 1 IEA MGI NCBI chr 4:41,569,731...41,638,158
Ensembl chr 4:41,569,775...41,638,158 		JBrowse link
G Drc1 dynein regulatory complex subunit 1 IEA MGI NCBI chr 5:30,486,328...30,524,039
Ensembl chr 5:30,486,386...30,524,039 		JBrowse link
G Foxh1 forkhead box H1 IEA MGI NCBI chr15:76,552,029...76,554,286
Ensembl chr15:76,552,425...76,554,148 		JBrowse link
G Ift27 intraflagellar transport 27 IAGP MGI PMID:25446516 NCBI chr15:78,043,660...78,058,281
Ensembl chr15:78,043,663...78,058,307 		JBrowse link
G Invs inversin IAGP MGI PMID:9664638 NCBI chr 4:48,279,707...48,431,956
Ensembl chr 4:48,279,760...48,431,954 		JBrowse link
G Odad2 outer dynein arm docking complex subunit 2 IAGP MGI PMID:23849778 NCBI chr18:7,088,233...7,298,272
Ensembl chr18:7,088,209...7,297,936 		JBrowse link
G Rpgrip1l Rpgrip1-like IEA MGI NCBI chr 8:91,943,658...92,039,919
Ensembl chr 8:91,943,658...92,039,890 		JBrowse link
abdominal situs inversus term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anks6 ankyrin repeat and sterile alpha motif domain containing 6 IAGP MGI PMID:32886109 NCBI chr 4:47,015,365...47,057,339
Ensembl chr 4:47,015,669...47,057,427 		JBrowse link
G Ccdc39 coiled-coil domain containing 39 IEA MGI NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459 		JBrowse link
G Dnaaf2 dynein, axonemal assembly factor 2 IAGP MGI PMID:23525783 NCBI chr12:69,235,861...69,245,203
Ensembl chr12:69,235,861...69,245,203 		JBrowse link
G Dnaaf3 dynein, axonemal assembly factor 3 IEA MGI NCBI chr 7:4,525,932...4,535,487
Ensembl chr 7:4,525,932...4,535,452 		JBrowse link
G Dnah11 dynein, axonemal, heavy chain 11 IEA MGI NCBI chr12:117,841,717...118,162,778
Ensembl chr12:117,841,717...118,162,778 		JBrowse link
G Dnah5 dynein, axonemal, heavy chain 5 IEA MGI NCBI chr15:28,155,000...28,472,191
Ensembl chr15:28,203,898...28,472,198 		JBrowse link
G Dnai1 dynein axonemal intermediate chain 1 IEA MGI NCBI chr 4:41,569,731...41,638,158
Ensembl chr 4:41,569,775...41,638,158 		JBrowse link
G Drc1 dynein regulatory complex subunit 1 IEA MGI NCBI chr 5:30,486,328...30,524,039
Ensembl chr 5:30,486,386...30,524,039 		JBrowse link
G Nek8 NIMA (never in mitosis gene a)-related expressed kinase 8 IAGP MGI PMID:23274954 NCBI chr11:78,056,932...78,067,501
Ensembl chr11:78,056,932...78,067,501 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16965
    growth/size/body region phenotype 7048
      heterotaxia 101
        abdominal situs abnormality 21
          abdominal situs ambiguus 16
          abdominal situs inversus 9
paths to the root