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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal outer ear skin morphology
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Accession:MP:0030530 term browser browse the term
Definition:any anomaly in a zone of skin that is part of an outer ear
Synonyms:exact_synonym: abnormal ear skin morphology;   abnormal external ear skin morphology



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abnormal outer ear skin morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Plat plasminogen activator, tissue IAGP MGI PMID:8133887 NCBI chr 8:23,247,655...23,272,864
Ensembl chr 8:23,247,743...23,272,860
JBrowse link
G Plau plasminogen activator, urokinase IAGP MGI PMID:8133887 NCBI chr14:20,886,730...20,893,456
Ensembl chr14:20,886,728...20,893,453
JBrowse link
abnormal ear pigmentation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:20880997 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Hps1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 IEA MGI NCBI chr19:42,743,629...42,770,013
Ensembl chr19:42,743,544...42,768,417
JBrowse link
G Hps4 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 IAGP MGI PMID:6031677 NCBI chr 5:112,490,849...112,526,290
Ensembl chr 5:112,490,949...112,526,280
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IAGP MGI PMID:1490901 PMID:5473311 NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382
JBrowse link
G Myo5a myosin VA IEA MGI NCBI chr 9:74,975,183...75,130,970
Ensembl chr 9:74,978,297...75,130,970
JBrowse link
G Polh polymerase (DNA directed), eta (RAD 30 related) IAGP MGI PMID:16397220 NCBI chr17:46,482,281...46,513,567
Ensembl chr17:46,482,281...46,513,571
JBrowse link
G Slc24a5 solute carrier family 24, member 5 IAGP MGI PMID:18424845 NCBI chr 2:124,910,076...124,930,316
Ensembl chr 2:124,910,044...124,930,597
JBrowse link
decreased ear pigmentation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G a nonagouti IAGP MGI PMID:10431243 NCBI chr 2:154,792,519...154,892,932
Ensembl chr 2:154,633,322...154,892,932
JBrowse link
G Ap3b1 adaptor-related protein complex 3, beta 1 subunit IEA MGI NCBI chr13:94,492,332...94,702,838
Ensembl chr13:94,495,468...94,702,825
JBrowse link
G Bloc1s3 biogenesis of lysosomal organelles complex-1, subunit 3 IAGP MGI PMID:7203014 NCBI chr 7:19,239,708...19,242,295
Ensembl chr 7:19,238,411...19,242,292
JBrowse link
G Hps1 HPS1, biogenesis of lysosomal organelles complex 3 subunit 1 IAGP MGI PMID:6031677 PMID:12847290 NCBI chr19:42,743,629...42,770,013
Ensembl chr19:42,743,544...42,768,417
JBrowse link
G Hps4 HPS4, biogenesis of lysosomal organelles complex 3 subunit 2 IAGP MGI PMID:864040 NCBI chr 5:112,490,849...112,526,290
Ensembl chr 5:112,490,949...112,526,280
JBrowse link
G Hps5 HPS5, biogenesis of lysosomal organelles complex 2 subunit 2 IEA MGI NCBI chr 7:46,409,890...46,445,501
Ensembl chr 7:46,409,890...46,445,488
JBrowse link
G Hps6 HPS6, biogenesis of lysosomal organelles complex 2 subunit 3 IEA MGI NCBI chr19:45,991,917...45,994,612
Ensembl chr19:45,991,947...45,994,612
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IEA MGI NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382
JBrowse link
G Kitl kit ligand IEA MGI NCBI chr10:99,851,477...99,936,278
Ensembl chr10:99,851,492...99,936,278
JBrowse link
G Lyst lysosomal trafficking regulator IEA MGI NCBI chr13:13,764,896...13,953,388
Ensembl chr13:13,764,982...13,953,388
JBrowse link
G Mc1r melanocortin 1 receptor IAGP MGI PMID:15653560 NCBI chr 8:124,133,839...124,137,483
Ensembl chr 8:124,133,846...124,137,483
JBrowse link
G Mitf melanogenesis associated transcription factor IAGP MGI PMID:8947051 PMID:11929848 NCBI chr 6:97,783,966...97,998,321
Ensembl chr 6:97,784,013...97,998,310
JBrowse link
G Oca2 oculocutaneous albinism II IEA MGI NCBI chr 7:55,889,341...56,186,266
Ensembl chr 7:55,889,508...56,186,266
JBrowse link
G Pde6b phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide IAGP MGI PMID:864040 NCBI chr 5:108,536,239...108,579,609
Ensembl chr 5:108,536,257...108,580,263
JBrowse link
G Tyr tyrosinase IEA MGI NCBI chr 7:87,073,979...87,142,637
Ensembl chr 7:87,073,979...87,142,720
JBrowse link
G Tyrp1 tyrosinase-related protein 1 IEA MGI NCBI chr 4:80,752,360...80,769,973
Ensembl chr 4:80,752,360...80,769,956
JBrowse link
increased ear pigmentation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acd adrenocortical dysplasia IEA MGI NCBI chr 8:106,424,789...106,427,748
Ensembl chr 8:106,422,492...106,427,734
JBrowse link
G Apc APC, WNT signaling pathway regulator IAGP MGI PMID:17002498 NCBI chr18:34,353,350...34,455,243
Ensembl chr18:34,353,977...34,455,605
JBrowse link
G Cbl Casitas B-lineage lymphoma IAGP MGI PMID:16211006 NCBI chr 9:44,054,273...44,145,556
Ensembl chr 9:44,054,273...44,145,346
JBrowse link
G Csnk1a1 casein kinase 1, alpha 1 IAGP MGI PMID:28878021 NCBI chr18:61,687,307...61,723,391
Ensembl chr18:61,688,345...61,723,132
JBrowse link
G Gna11 guanine nucleotide binding protein, alpha 11 IAGP MGI PMID:12533510 PMID:28194446 NCBI chr10:81,364,558...81,380,996
Ensembl chr10:81,364,558...81,381,024
JBrowse link
G Gnaq guanine nucleotide binding protein, alpha q polypeptide IAGP MGI PMID:12533510 PMID:26763459 NCBI chr19:16,110,048...16,365,884
Ensembl chr19:16,110,195...16,364,827
JBrowse link
G Kitl kit ligand IAGP MGI PMID:8875893 PMID:9360640 NCBI chr10:99,851,477...99,936,278
Ensembl chr10:99,851,492...99,936,278
JBrowse link
G Krt2 keratin 2 IAGP MGI PMID:12533510 PMID:24751727 NCBI chr15:101,719,124...101,727,391
Ensembl chr15:101,719,124...101,726,604
JBrowse link
G Nf1 neurofibromin 1 IAGP MGI PMID:12533510 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438
JBrowse link
G Rpl27a ribosomal protein L27A IAGP MGI PMID:21674502 NCBI chr 7:109,118,354...109,121,967
Ensembl chr 7:109,118,354...109,121,574
JBrowse link
G Rps19 ribosomal protein S19 IAGP MGI PMID:18641651 NCBI chr 7:24,584,013...24,589,236
Ensembl chr 7:24,583,796...24,589,231
JBrowse link
G Rps20 ribosomal protein S20 IAGP MGI PMID:18641651 NCBI chr 4:3,831,334...3,835,600
Ensembl chr 4:3,831,334...3,835,665
JBrowse link
G Rps6 ribosomal protein S6 IAGP MGI PMID:18641651 NCBI chr 4:86,772,336...86,775,604
Ensembl chr 4:86,772,897...86,775,649
JBrowse link
G Trp53 transformation related protein 53 IAGP MGI PMID:18641651 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16734
    craniofacial phenotype 1621
      abnormal craniofacial morphology 1621
        abnormal outer ear morphology 164
          abnormal outer ear skin morphology 35
            abnormal ear pigmentation + 33
paths to the root