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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal endoderm morphology
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Accession:MP:0014140 term browser browse the term
Definition:any structural anomaly of the primary germ layer that lies remote from the surface of the embryo and gives rise to internal tissues such as gut


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abnormal posterior definitive endoderm morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dact1 dishevelled-binding antagonist of beta-catenin 1 IAGP MGI PMID:19701191 NCBI chr12:71,356,658...71,366,881
Ensembl chr12:71,356,658...71,366,881 		JBrowse link
G Tead1 TEA domain family member 1 IAGP MGI PMID:18332127 NCBI chr 7:112,278,563...112,505,991
Ensembl chr 7:112,278,525...112,506,014 		JBrowse link
G Tead2 TEA domain family member 2 IAGP MGI PMID:18332127 NCBI chr 7:44,865,216...44,882,892
Ensembl chr 7:44,865,177...44,883,068 		JBrowse link
absent endoderm term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cxxc1 CXXC finger protein 1 IAGP MGI PMID:11604496 NCBI chr18:74,349,283...74,354,564
Ensembl chr18:74,349,195...74,354,567 		JBrowse link
G Gdf3 growth differentiation factor 3 IAGP MGI PMID:16368929 NCBI chr 6:122,582,362...122,587,046
Ensembl chr 6:122,582,362...122,587,046 		JBrowse link
G Lrp5 low density lipoprotein receptor-related protein 5 IAGP MGI PMID:15142971 NCBI chr19:3,634,825...3,736,574
Ensembl chr19:3,634,828...3,736,564 		JBrowse link
G Lrp6 low density lipoprotein receptor-related protein 6 IAGP MGI PMID:15142971 NCBI chr 6:134,423,439...134,543,876
Ensembl chr 6:134,423,439...134,543,928 		JBrowse link
G Smad2 SMAD family member 2 IAGP MGI PMID:9529255 NCBI chr18:76,369,898...76,444,819
Ensembl chr18:76,374,651...76,444,034 		JBrowse link
G Smarcc1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 IAGP MGI PMID:11604513 NCBI chr 9:109,961,129...110,069,773
Ensembl chr 9:109,946,776...110,069,246 		JBrowse link
thin endoderm term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gdf3 growth differentiation factor 3 IAGP MGI PMID:16368929 NCBI chr 6:122,582,362...122,587,046
Ensembl chr 6:122,582,362...122,587,046 		JBrowse link
G Slc31a1 solute carrier family 31, member 1 IAGP MGI PMID:11391004 NCBI chr 4:62,278,821...62,310,006
Ensembl chr 4:62,278,964...62,310,006 		JBrowse link
G Sox17 SRY (sex determining region Y)-box 17 IAGP MGI PMID:11973269 NCBI chr 1:4,561,154...4,567,624
Ensembl chr 1:4,561,154...4,567,577 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16962
    embryo phenotype 2436
      abnormal embryo morphology 1859
        abnormal embryonic tissue morphology 1272
          abnormal germ layer morphology 194
            abnormal endoderm morphology 11
              abnormal posterior definitive endoderm morphology 3
              absent endoderm 6
              thin endoderm 3
paths to the root