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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:decreased intestine length
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Accession:MP:0013916 term browser browse the term
Definition:reduced length of the digestive tube passing from the stomach to the anus, consisting of the small and large intestine divisions
Synonyms:exact_synonym: reduced length of intestine;   short intestine


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decreased intestine length term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd8 chromodomain helicase DNA binding protein 8 IAGP MGI PMID:27602517 NCBI chr14:52,435,608...52,495,499
Ensembl chr14:52,435,608...52,495,237 		JBrowse link
G Hdac2 histone deacetylase 2 IAGP MGI PMID:17909008 NCBI chr10:36,850,293...36,877,885
Ensembl chr10:36,850,540...36,877,885 		JBrowse link
G Nxn nucleoredoxin IEA MGI NCBI chr11:76,148,052...76,289,967
Ensembl chr11:76,148,024...76,289,966 		JBrowse link
G Prss8 serine protease 8 (prostasin) IAGP MGI PMID:29617460 NCBI chr 7:127,524,889...127,529,266
Ensembl chr 7:127,524,888...127,529,276 		JBrowse link
G Sclt1 sodium channel and clathrin linker 1 IAGP MGI PMID:28486600 NCBI chr 3:41,581,140...41,696,968
Ensembl chr 3:41,581,155...41,696,949 		JBrowse link
G Spint2 serine protease inhibitor, Kunitz type 2 IAGP MGI PMID:29617460 NCBI chr 7:28,955,755...28,981,484
Ensembl chr 7:28,955,748...28,981,337 		JBrowse link
decreased colon length term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ace2 angiotensin converting enzyme 2 IAGP MGI PMID:25448263 PMID:33097186 NCBI chr  X:162,922,338...162,971,414
Ensembl chr  X:162,922,328...162,971,416 		JBrowse link
G Adamdec1 ADAM-like, decysin 1 IAGP MGI PMID:27226416 NCBI chr14:68,800,829...68,819,535
Ensembl chr14:68,800,829...68,819,544 		JBrowse link
G Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif 18 IAGP MGI PMID:28145888 NCBI chr 8:114,423,755...114,575,975
Ensembl chr 8:114,423,758...114,575,370 		JBrowse link
G Arhgap17 Rho GTPase activating protein 17 IAGP MGI PMID:27229483 NCBI chr 7:122,878,372...122,969,171
Ensembl chr 7:122,878,441...122,969,138 		JBrowse link
G B3gnt6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 IAGP MGI PMID:17517967 NCBI chr 7:97,841,622...97,848,682
Ensembl chr 7:97,841,624...97,848,688 		JBrowse link
G Cx3cr1 C-X3-C motif chemokine receptor 1 IAGP MGI PMID:32755573 NCBI chr 9:119,877,749...119,897,362
Ensembl chr 9:119,877,749...119,898,945 		JBrowse link
G Enpp3 ectonucleotide pyrophosphatase/phosphodiesterase 3 IAGP MGI PMID:25692702 NCBI chr10:24,649,712...24,712,093
Ensembl chr10:24,648,304...24,718,721 		JBrowse link
G Fam3d FAM3 metabolism regulating signaling molecule D IAGP MGI PMID:33219235 NCBI chr14:14,091,010...14,120,836
Ensembl chr14:14,091,019...14,120,836 		JBrowse link
G Fem1a fem 1 homolog a IAGP MGI PMID:26439841 NCBI chr17:56,563,793...56,570,608
Ensembl chr17:56,563,810...56,570,610 		JBrowse link
G Fgf10 fibroblast growth factor 10 IAGP MGI PMID:16956603 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651 		JBrowse link
G Fndc4 fibronectin type III domain containing 4 IAGP MGI PMID:27066907 NCBI chr 5:31,449,589...31,453,279
Ensembl chr 5:31,449,586...31,453,424 		JBrowse link
G Gatm glycine amidinotransferase (L-arginine:glycine amidinotransferase) IAGP MGI PMID:28137860 NCBI chr 2:122,424,954...122,441,758
Ensembl chr 2:122,424,948...122,441,784 		JBrowse link
G Gpr35 G protein-coupled receptor 35 IAGP MGI PMID:32755573 NCBI chr 1:92,875,774...92,913,984
Ensembl chr 1:92,878,587...92,914,113 		JBrowse link
G Il10 interleukin 10 IAGP MGI PMID:24442434 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711 		JBrowse link
G Il19 interleukin 19 IAGP MGI PMID:25794104 NCBI chr 1:130,860,393...130,873,194
Ensembl chr 1:130,860,393...130,867,852 		JBrowse link
G Il23r interleukin 23 receptor IAGP MGI PMID:22089030 NCBI chr 6:67,399,906...67,468,838
Ensembl chr 6:67,399,916...67,468,839 		JBrowse link
G Map3k8 mitogen-activated protein kinase kinase kinase 8 IAGP MGI PMID:23064365 NCBI chr18:4,331,325...4,352,978
Ensembl chr18:4,331,327...4,353,015 		JBrowse link
G Mir139 microRNA 139 IAGP MGI PMID:26859226 NCBI chr 7:101,124,583...101,124,650
Ensembl chr 7:101,124,583...101,124,650 		JBrowse link
G Muc2 mucin 2 IAGP MGI PMID:18318598 NCBI chr 7:141,276,583...141,308,428
Ensembl chr 7:141,276,583...141,308,430 		JBrowse link
G Nfil3 nuclear factor, interleukin 3, regulated IAGP MGI PMID:24442434 NCBI chr13:53,121,245...53,136,914
Ensembl chr13:53,121,245...53,135,109 		JBrowse link
G Nlrp6 NLR family, pyrin domain containing 6 IAGP MGI PMID:21593405 NCBI chr 7:140,500,777...140,509,105
Ensembl chr 7:140,500,815...140,509,105 		JBrowse link
G Rab11a RAB11A, member RAS oncogene family IAGP MGI PMID:25063677 NCBI chr 9:64,622,582...64,645,038
Ensembl chr 9:64,622,581...64,645,040 		JBrowse link
G Rab32 RAB32, member RAS oncogene family IAGP MGI PMID:30338217 NCBI chr10:10,420,783...10,433,951
Ensembl chr10:10,420,746...10,434,009 		JBrowse link
G Rag2 recombination activating gene 2 IAGP MGI PMID:22089030 NCBI chr 2:101,455,057...101,462,873
Ensembl chr 2:101,455,063...101,462,874 		JBrowse link
G Rasa1 RAS p21 protein activator 1 IAGP MGI PMID:22949508 NCBI chr13:85,362,893...85,437,487
Ensembl chr13:85,362,899...85,437,249 		JBrowse link
G Rnf20 ring finger protein 20 IAGP MGI PMID:26854224 NCBI chr 4:49,632,005...49,656,887
Ensembl chr 4:49,632,006...49,656,887 		JBrowse link
G Rptor regulatory associated protein of MTOR, complex 1 IAGP MGI PMID:22504639 NCBI chr11:119,493,731...119,790,417
Ensembl chr11:119,493,731...119,790,402 		JBrowse link
G Slc44a4 solute carrier family 44, member 4 IAGP MGI PMID:38713615 NCBI chr17:35,133,200...35,149,412
Ensembl chr17:35,133,442...35,149,412 		JBrowse link
G Slc5a6 solute carrier family 5 (sodium-dependent vitamin transporter), member 6 IAGP MGI PMID:31369292 NCBI chr 5:31,193,380...31,206,268
Ensembl chr 5:31,193,380...31,206,268 		JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 IAGP MGI PMID:21518954 NCBI chr19:26,582,578...26,755,721
Ensembl chr19:26,582,450...26,755,722 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 IAGP MGI PMID:21518954 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Tfrc transferrin receptor IAGP MGI PMID:26324903 NCBI chr16:32,427,714...32,451,612
Ensembl chr16:32,427,738...32,451,612 		JBrowse link
G Tlr4 toll-like receptor 4 IAGP MGI PMID:25172014 NCBI chr 4:66,745,788...66,765,338
Ensembl chr 4:66,745,821...66,848,521 		JBrowse link
G Tlr5 toll-like receptor 5 IAGP MGI PMID:25172014 NCBI chr 1:182,782,317...182,804,010
Ensembl chr 1:182,782,353...182,804,010 		JBrowse link
G Tmem258 transmembrane protein 258 IAGP MGI PMID:27974209 NCBI chr19:10,181,566...10,185,188
Ensembl chr19:10,181,378...10,185,188 		JBrowse link
G Tnfaip3 tumor necrosis factor, alpha-induced protein 3 IAGP MGI PMID:20530205 NCBI chr10:18,876,658...18,891,158
Ensembl chr10:18,876,658...18,891,405 		JBrowse link
G Tnfaip8 tumor necrosis factor, alpha-induced protein 8 IAGP MGI PMID:37459052 NCBI chr18:50,112,494...50,226,296
Ensembl chr18:50,112,494...50,240,240 		JBrowse link
G Tnfaip8l1 tumor necrosis factor, alpha-induced protein 8-like 1 IAGP MGI PMID:37459052 NCBI chr17:56,469,439...56,491,249
Ensembl chr17:56,469,477...56,480,955 		JBrowse link
G Wnt5a wingless-type MMTV integration site family, member 5A IAGP MGI PMID:19577771 NCBI chr14:28,224,962...28,249,405
Ensembl chr14:28,226,707...28,249,405 		JBrowse link
decreased small intestine length term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc25a cell division cycle 25A IAGP MGI PMID:19273838 NCBI chr 9:109,704,545...109,722,963
Ensembl chr 9:109,704,647...109,722,963 		JBrowse link
G Cdc25b cell division cycle 25B IAGP MGI PMID:19273838 NCBI chr 2:131,028,356...131,040,431
Ensembl chr 2:131,028,869...131,040,417 		JBrowse link
G Cdc25c cell division cycle 25C IAGP MGI PMID:19273838 NCBI chr18:34,866,046...34,884,644
Ensembl chr18:34,866,046...34,884,586 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:19273838 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G Hecw2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 IAGP MGI PMID:25555806 NCBI chr 1:53,846,031...54,234,193
Ensembl chr 1:53,846,035...54,234,327 		JBrowse link
G Rpap3 RNA polymerase II associated protein 3 IAGP MGI PMID:34376666 NCBI chr15:97,572,978...97,603,746
Ensembl chr15:97,572,978...97,603,706 		JBrowse link
G Smarca2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 IAGP MGI PMID:21518954 NCBI chr19:26,582,578...26,755,721
Ensembl chr19:26,582,450...26,755,722 		JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 IAGP MGI PMID:21518954 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526 		JBrowse link
G Stk26 serine/threonine kinase 26 IAGP MGI PMID:34240584 NCBI chr  X:49,930,052...49,981,980
Ensembl chr  X:49,929,924...49,981,974 		JBrowse link
G Thra thyroid hormone receptor alpha IAGP MGI PMID:9927422 NCBI chr11:98,631,539...98,659,832
Ensembl chr11:98,631,464...98,659,832 		JBrowse link
G Trp53 transformation related protein 53 IAGP MGI PMID:34376666 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16965
    digestive/alimentary phenotype 1913
      abnormal digestive system morphology 1569
        abnormal intestine morphology 684
          decreased intestine length 54
            decreased large intestine length + 39
            decreased small intestine length 11
paths to the root