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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal small intestine goblet cell morphology
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Accession:MP:0013792 term browser browse the term
Definition:any structural anomaly of the glandular simple columnar epithelial cell found in the mucosal lining of the small intestine, whose primary function is to secrete gel-forming mucins, the major components of mucus
Synonyms:exact_synonym: abnormal goblet cell of epithelium of small intestine morphology;   abnormal goblet cell of small intestine morphology;   abnormal small intestinal goblet cell morphology


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abnormal small intestine goblet cell morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cftr cystic fibrosis transmembrane conductance regulator IAGP MGI PMID:8589719 NCBI chr 6:18,170,686...18,322,769
Ensembl chr 6:18,170,686...18,322,767 		JBrowse link
G E2f4 E2F transcription factor 4 IAGP MGI PMID:10983977 NCBI chr 8:106,024,295...106,032,002
Ensembl chr 8:106,024,295...106,032,002 		JBrowse link
G Rpap3 RNA polymerase II associated protein 3 IAGP MGI PMID:34376666 NCBI chr15:97,572,978...97,603,746
Ensembl chr15:97,572,978...97,603,706 		JBrowse link
G Rprd1b regulation of nuclear pre-mRNA domain containing 1B IAGP MGI PMID:33431892 NCBI chr 2:157,870,395...157,920,127
Ensembl chr 2:157,870,417...157,974,217 		JBrowse link
G Tcf7l2 transcription factor 7 like 2, T cell specific, HMG box IAGP MGI PMID:21383188 PMID:22393260 NCBI chr19:55,730,227...55,922,091
Ensembl chr19:55,730,252...55,922,086 		JBrowse link
G Xbp1 X-box binding protein 1 IAGP MGI PMID:18775308 NCBI chr11:5,470,641...5,475,993
Ensembl chr11:5,470,659...5,475,893 		JBrowse link
abnormal duodenal goblet cell morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn15 claudin 15 IAGP MGI PMID:18242218 NCBI chr 5:136,996,723...137,004,699
Ensembl chr 5:136,995,470...137,004,712 		JBrowse link
abnormal ileal goblet cell morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgap17 Rho GTPase activating protein 17 IAGP MGI PMID:27229483 NCBI chr 7:122,878,372...122,969,171
Ensembl chr 7:122,878,441...122,969,138 		JBrowse link
G Cftr cystic fibrosis transmembrane conductance regulator IAGP MGI PMID:16571105 NCBI chr 6:18,170,686...18,322,769
Ensembl chr 6:18,170,686...18,322,767 		JBrowse link
abnormal intestinal villus goblet cell morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Usp22 ubiquitin specific peptidase 22 IAGP MGI PMID:26431380 NCBI chr11:61,042,607...61,065,885
Ensembl chr11:61,042,611...61,065,881 		JBrowse link
abnormal jeujunal goblet cell morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cldn15 claudin 15 IAGP MGI PMID:18242218 NCBI chr 5:136,996,723...137,004,699
Ensembl chr 5:136,995,470...137,004,712 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 17065
    cellular phenotype 5439
      abnormal cell morphology 2024
        abnormal intestinal goblet cell morphology 92
          abnormal small intestine goblet cell morphology 9
            abnormal intestinal villus goblet cell morphology + 4
Path 2
Term Annotations click to browse term
  mammalian phenotype 17065
    digestive/alimentary phenotype 1925
      abnormal digestive system morphology 1580
        abnormal intestine morphology 749
          abnormal intestinal mucosa morphology 267
            abnormal intestinal goblet cell morphology 92
              abnormal small intestine goblet cell morphology 9
                abnormal intestinal villus goblet cell morphology + 4
paths to the root