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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal T-helper cell morphology
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Accession:MP:0013760 term browser browse the term
Definition:any structural anomaly of an effector T cell that provides help in the form of secreted cytokines to other immune cells
Synonyms:exact_synonym: abnormal helper T lymphocyte morphology


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abnormal CD4-positive helper T cell morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aptx aprataxin IAGP MGI PMID:34723800 NCBI chr 4:40,682,078...40,703,206
Ensembl chr 4:40,682,382...40,703,194 		JBrowse link
G Atm ataxia telangiectasia mutated IAGP MGI PMID:34723800 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040 		JBrowse link
G Orai1 ORAI calcium release-activated calcium modulator 1 IAGP MGI PMID:28294127 NCBI chr 5:123,153,078...123,168,515
Ensembl chr 5:123,153,137...123,168,519 		JBrowse link
G Orai2 ORAI calcium release-activated calcium modulator 2 IAGP MGI PMID:28294127 NCBI chr 5:136,176,310...136,201,418
Ensembl chr 5:136,176,313...136,199,567 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region IAGP MGI PMID:21168915 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
abnormal T follicular helper cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl6 B cell leukemia/lymphoma 6 IAGP MGI PMID:23980208 NCBI chr16:23,783,800...23,807,623
Ensembl chr16:23,783,802...23,807,602 		JBrowse link
G Prdm1 PR domain containing 1, with ZNF domain IAGP MGI PMID:21948081 NCBI chr10:44,313,170...44,404,548
Ensembl chr10:44,313,173...44,404,497 		JBrowse link
abnormal T-helper 1 cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cbfb core binding factor beta IAGP MGI PMID:17646405 NCBI chr 8:105,897,230...105,944,621
Ensembl chr 8:105,897,306...105,944,621 		JBrowse link
G Cd247 CD247 antigen IAGP MGI PMID:22945921 NCBI chr 1:165,607,514...165,698,722
Ensembl chr 1:165,616,250...165,704,846 		JBrowse link
G Cd274 CD274 antigen IAGP MGI PMID:20639491 NCBI chr19:29,339,428...29,365,495
Ensembl chr19:29,344,855...29,365,495 		JBrowse link
G Efnb1 ephrin B1 IAGP MGI PMID:21976681 NCBI chr  X:98,179,667...98,192,628
Ensembl chr  X:98,179,736...98,192,597 		JBrowse link
G Efnb2 ephrin B2 IAGP MGI PMID:21976681 NCBI chr 8:8,667,235...8,711,242
Ensembl chr 8:8,667,434...8,711,242 		JBrowse link
G Gadd45b growth arrest and DNA-damage-inducible 45 beta IAGP MGI PMID:14691480 NCBI chr10:80,765,925...80,768,038
Ensembl chr10:80,765,907...80,768,038 		JBrowse link
G Gadd45g growth arrest and DNA-damage-inducible 45 gamma IAGP MGI PMID:14691480 NCBI chr13:52,000,711...52,002,511
Ensembl chr13:52,000,714...52,002,504 		JBrowse link
G Gpr174 G protein-coupled receptor 174 IAGP MGI PMID:26077720 NCBI chr  X:106,299,484...106,340,377
Ensembl chr  X:106,299,484...106,340,375 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:21468021 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G Ifngr2 interferon gamma receptor 2 IAGP MGI PMID:9653170 NCBI chr16:91,343,947...91,360,895
Ensembl chr16:91,343,960...91,362,511 		JBrowse link
G Il10 interleukin 10 IAGP MGI PMID:16778988 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711 		JBrowse link
G Il4 interleukin 4 IAGP MGI PMID:16778988 NCBI chr11:53,503,287...53,509,492
Ensembl chr11:53,493,809...53,509,496 		JBrowse link
G Irf4 interferon regulatory factor 4 IAGP MGI PMID:12189207 NCBI chr13:30,933,191...30,950,965
Ensembl chr13:30,933,209...30,950,959 		JBrowse link
G Map4k3 mitogen-activated protein kinase kinase kinase kinase 3 IAGP MGI PMID:21983831 NCBI chr17:80,887,942...81,039,118
Ensembl chr17:80,887,941...81,035,914 		JBrowse link
G Mapk11 mitogen-activated protein kinase 11 IEA MGI NCBI chr15:89,026,685...89,033,809
Ensembl chr15:89,026,689...89,033,831 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 IEA MGI NCBI chr17:28,910,243...28,967,379
Ensembl chr17:28,910,303...28,967,380 		JBrowse link
G Mapk8 mitogen-activated protein kinase 8 IAGP MGI PMID:9851932 NCBI chr14:33,099,855...33,169,215
Ensembl chr14:33,099,855...33,169,115 		JBrowse link
G Mapk9 mitogen-activated protein kinase 9 IAGP MGI PMID:9806643 NCBI chr11:49,737,558...49,777,248
Ensembl chr11:49,737,578...49,777,248 		JBrowse link
G Myd88 myeloid differentiation primary response gene 88 IAGP MGI PMID:18656388 NCBI chr 9:119,165,000...119,169,084
Ensembl chr 9:119,165,000...119,170,477 		JBrowse link
G Nbr1 NBR1, autophagy cargo receptor IAGP MGI PMID:20808283 NCBI chr11:101,442,933...101,472,777
Ensembl chr11:101,442,975...101,472,777 		JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 IAGP MGI PMID:21468021 NCBI chr 2:56,996,845...57,014,018
Ensembl chr 2:56,996,842...57,014,015 		JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 IAGP MGI PMID:22396549 NCBI chr13:75,237,407...75,282,980
Ensembl chr13:75,237,945...75,282,980 		JBrowse link
G Prkcq protein kinase C, theta IAGP MGI PMID:15528385 NCBI chr 2:11,176,716...11,306,037
Ensembl chr 2:11,176,919...11,306,033 		JBrowse link
G Ptger1 prostaglandin E receptor 1 (subtype EP1) IAGP MGI PMID:17967902 NCBI chr 8:84,393,171...84,399,385
Ensembl chr 8:84,393,307...84,399,382 		JBrowse link
G Rel reticuloendotheliosis oncogene IAGP MGI PMID:12235116 NCBI chr11:23,686,847...23,720,969
Ensembl chr11:23,686,847...23,720,970 		JBrowse link
G Sema4a sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A IAGP MGI PMID:15780988 NCBI chr 3:88,343,266...88,368,500
Ensembl chr 3:88,343,266...88,368,489 		JBrowse link
G Sit1 suppression inducing transmembrane adaptor 1 IAGP MGI PMID:16107703 NCBI chr 4:43,482,083...43,483,709
Ensembl chr 4:43,482,081...43,483,734 		JBrowse link
G Slc1a5 solute carrier family 1 (neutral amino acid transporter), member 5 IAGP MGI PMID:24792914 NCBI chr 7:16,515,259...16,532,199
Ensembl chr 7:16,515,265...16,532,199 		JBrowse link
G Smad7 SMAD family member 7 IAGP MGI PMID:20354004 NCBI chr18:75,500,436...75,529,006
Ensembl chr18:75,500,600...75,529,006 		JBrowse link
G Stat6 signal transducer and activator of transcription 6 IAGP MGI PMID:8602264 PMID:9834104 NCBI chr10:127,478,855...127,496,856
Ensembl chr10:127,478,855...127,496,826 		JBrowse link
G Tbx21 T-box 21 IAGP MGI PMID:11786644 NCBI chr11:96,988,833...97,006,157
Ensembl chr11:96,988,897...97,006,157 		JBrowse link
G Tnfrsf4 tumor necrosis factor receptor superfamily, member 4 IAGP MGI PMID:20808283 NCBI chr 4:156,098,049...156,101,070
Ensembl chr 4:156,098,300...156,101,069 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator IAGP MGI PMID:21683627 NCBI chr19:3,985,171...3,999,340
Ensembl chr19:3,985,186...3,999,340 		JBrowse link
abnormal T-helper 1 cell morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd247 CD247 antigen IAGP MGI PMID:7688481 NCBI chr 1:165,607,514...165,698,722
Ensembl chr 1:165,616,250...165,704,846 		JBrowse link
G Ebi3 Epstein-Barr virus induced gene 3 IAGP MGI PMID:15756639 NCBI chr17:56,259,623...56,264,022
Ensembl chr17:56,259,640...56,264,022 		JBrowse link
G Fbn1 fibrillin 1 IAGP MGI PMID:24107997 NCBI chr 2:125,142,514...125,348,417
Ensembl chr 2:125,142,514...125,349,913 		JBrowse link
G Il1rn interleukin 1 receptor antagonist IAGP MGI PMID:15749858 NCBI chr 2:24,226,872...24,241,503
Ensembl chr 2:24,226,865...24,241,506 		JBrowse link
G Il6 interleukin 6 IAGP MGI PMID:8666893 NCBI chr 5:30,218,112...30,224,973
Ensembl chr 5:30,218,112...30,224,979 		JBrowse link
G Mir155 microRNA 155 IAGP MGI PMID:17463290 NCBI chr16:84,511,028...84,511,092
Ensembl chr16:84,511,028...84,511,092 		JBrowse link
G Nfkbiz nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta IAGP MGI PMID:23453632 NCBI chr16:55,631,740...55,659,004
Ensembl chr16:55,631,738...55,659,262 		JBrowse link
G Sh2d1a SH2 domain containing 1A IAGP MGI PMID:11404475 NCBI chr  X:41,591,442...41,610,974
Ensembl chr  X:41,591,330...41,618,207 		JBrowse link
G Tbx21 T-box 21 IAGP MGI PMID:16273099 NCBI chr11:96,988,833...97,006,157
Ensembl chr11:96,988,897...97,006,157 		JBrowse link
abnormal T-helper 17 cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ackr4 atypical chemokine receptor 4 IAGP MGI PMID:20562329 NCBI chr 9:103,974,881...104,003,842
Ensembl chr 9:103,961,356...104,004,132 		JBrowse link
G B9d2 B9 protein domain 2 IAGP MGI PMID:21435587 NCBI chr 7:25,380,205...25,385,987
Ensembl chr 7:25,380,205...25,385,983 		JBrowse link
G Cd4 CD4 antigen IAGP MGI PMID:33238133 NCBI chr 6:124,841,656...124,865,210
Ensembl chr 6:124,841,655...124,865,184 		JBrowse link
G Efnb1 ephrin B1 IAGP MGI PMID:21976681 NCBI chr  X:98,179,667...98,192,628
Ensembl chr  X:98,179,736...98,192,597 		JBrowse link
G Efnb2 ephrin B2 IAGP MGI PMID:21976681 NCBI chr 8:8,667,235...8,711,242
Ensembl chr 8:8,667,434...8,711,242 		JBrowse link
G Gfm1 G elongation factor, mitochondrial 1 IAGP MGI PMID:33238133 NCBI chr 3:67,337,448...67,382,401
Ensembl chr 3:67,337,429...67,383,862 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:21468021 PMID:23966625 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G Map4k3 mitogen-activated protein kinase kinase kinase kinase 3 IAGP MGI PMID:21983831 NCBI chr17:80,887,942...81,039,118
Ensembl chr17:80,887,941...81,035,914 		JBrowse link
G Mapk11 mitogen-activated protein kinase 11 IEA MGI NCBI chr15:89,026,685...89,033,809
Ensembl chr15:89,026,689...89,033,831 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 IEA MGI NCBI chr17:28,910,243...28,967,379
Ensembl chr17:28,910,303...28,967,380 		JBrowse link
G Mir155 microRNA 155 IAGP MGI PMID:26163372 NCBI chr16:84,511,028...84,511,092
Ensembl chr16:84,511,028...84,511,092 		JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 IAGP MGI PMID:21468021 NCBI chr 2:56,996,845...57,014,018
Ensembl chr 2:56,996,842...57,014,015 		JBrowse link
G Otud5 OTU domain containing 5 IAGP MGI PMID:25470037 NCBI chr  X:7,705,852...7,742,865
Ensembl chr  X:7,707,603...7,742,865 		JBrowse link
G Pparg peroxisome proliferator activated receptor gamma IAGP MGI PMID:19737866 NCBI chr 6:115,337,840...115,467,365
Ensembl chr 6:115,337,912...115,467,360 		JBrowse link
G Rorc RAR-related orphan receptor gamma IAGP MGI PMID:28846085 NCBI chr 3:94,280,101...94,305,583
Ensembl chr 3:94,280,101...94,305,583 		JBrowse link
G Slc1a5 solute carrier family 1 (neutral amino acid transporter), member 5 IAGP MGI PMID:24792914 NCBI chr 7:16,515,259...16,532,199
Ensembl chr 7:16,515,265...16,532,199 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 IAGP MGI PMID:21435587 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator IAGP MGI PMID:21683627 NCBI chr19:3,985,171...3,999,340
Ensembl chr19:3,985,186...3,999,340 		JBrowse link
abnormal T-helper 2 cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Batf basic leucine zipper transcription factor, ATF-like IAGP MGI PMID:20421391 NCBI chr12:85,733,494...85,755,861
Ensembl chr12:85,733,443...85,755,861 		JBrowse link
G Bhlhe41 basic helix-loop-helix family, member e41 IAGP MGI PMID:19881507 NCBI chr 6:145,803,969...145,811,146
Ensembl chr 6:145,803,969...145,811,284 		JBrowse link
G C3ar1 complement component 3a receptor 1 IAGP MGI PMID:12421977 NCBI chr 6:122,824,099...122,833,116
Ensembl chr 6:122,824,097...122,833,120 		JBrowse link
G Card11 caspase recruitment domain family, member 11 IAGP MGI PMID:16751370 NCBI chr 5:140,858,754...140,986,351
Ensembl chr 5:140,858,745...140,986,337 		JBrowse link
G Cblb Casitas B-lineage lymphoma b IAGP MGI PMID:19009524 NCBI chr16:51,851,593...52,028,410
Ensembl chr16:51,851,588...52,028,411 		JBrowse link
G Cish cytokine inducible SH2-containing protein IAGP MGI PMID:23727894 NCBI chr 9:107,173,858...107,179,983
Ensembl chr 9:107,173,225...107,179,983 		JBrowse link
G Col10a1 collagen, type X, alpha 1 IAGP MGI PMID:22692895 NCBI chr10:34,265,977...34,273,081
Ensembl chr10:34,265,977...34,273,081 		JBrowse link
G Foxp3 forkhead box P3 IAGP MGI PMID:24135136 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484 		JBrowse link
G Icosl icos ligand IAGP MGI PMID:12833154 NCBI chr10:77,904,921...77,915,359
Ensembl chr10:77,905,136...77,919,747 		JBrowse link
G Il10 interleukin 10 IAGP MGI PMID:16778988 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711 		JBrowse link
G Il12b interleukin 12b IAGP MGI PMID:16778988 NCBI chr11:44,290,890...44,305,504
Ensembl chr11:44,290,890...44,304,860 		JBrowse link
G Il13 interleukin 13 IAGP MGI PMID:9768762 NCBI chr11:53,522,150...53,525,529
Ensembl chr11:53,522,151...53,525,529 		JBrowse link
G Il17ra interleukin 17 receptor A IAGP MGI PMID:20154671 NCBI chr 6:120,440,143...120,460,692
Ensembl chr 6:120,440,208...120,464,520 		JBrowse link
G Il4 interleukin 4 IAGP MGI PMID:18719110 NCBI chr11:53,503,287...53,509,492
Ensembl chr11:53,493,809...53,509,496 		JBrowse link
G Itch itchy, E3 ubiquitin protein ligase IAGP MGI PMID:24135136 NCBI chr 2:154,975,401...155,068,775
Ensembl chr 2:154,975,429...155,068,775 		JBrowse link
G Itk IL2 inducible T cell kinase IAGP MGI PMID:19009524 NCBI chr11:46,215,975...46,280,342
Ensembl chr11:46,215,977...46,280,342 		JBrowse link
G Map4k3 mitogen-activated protein kinase kinase kinase kinase 3 IAGP MGI PMID:21983831 NCBI chr17:80,887,942...81,039,118
Ensembl chr17:80,887,941...81,035,914 		JBrowse link
G Mapk11 mitogen-activated protein kinase 11 IEA MGI NCBI chr15:89,026,685...89,033,809
Ensembl chr15:89,026,689...89,033,831 		JBrowse link
G Mapk14 mitogen-activated protein kinase 14 IEA MGI NCBI chr17:28,910,243...28,967,379
Ensembl chr17:28,910,303...28,967,380 		JBrowse link
G Nbr1 NBR1, autophagy cargo receptor IAGP MGI PMID:20808283 NCBI chr11:101,442,933...101,472,777
Ensembl chr11:101,442,975...101,472,777 		JBrowse link
G Pbrm1 polybromo 1 IAGP MGI PMID:22336179 NCBI chr14:30,741,095...30,843,549
Ensembl chr14:30,741,095...30,843,549 		JBrowse link
G Pgap3 post-GPI attachment to proteins 3 IAGP MGI PMID:23864655 NCBI chr11:98,279,498...98,292,022
Ensembl chr11:98,279,503...98,291,316 		JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region IAGP MGI PMID:15137944 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704 		JBrowse link
G Rsad2 radical S-adenosyl methionine domain containing 2 IAGP MGI PMID:19047684 NCBI chr12:26,492,742...26,506,451
Ensembl chr12:26,492,745...26,506,451 		JBrowse link
G Slc1a5 solute carrier family 1 (neutral amino acid transporter), member 5 IAGP MGI PMID:24792914 NCBI chr 7:16,515,259...16,532,199
Ensembl chr 7:16,515,265...16,532,199 		JBrowse link
G Stat6 signal transducer and activator of transcription 6 IAGP MGI PMID:8602264 PMID:8624821 PMID:18719110 NCBI chr10:127,478,855...127,496,856
Ensembl chr10:127,478,855...127,496,826 		JBrowse link
G Tnfrsf4 tumor necrosis factor receptor superfamily, member 4 IAGP MGI PMID:20808283 NCBI chr 4:156,098,049...156,101,070
Ensembl chr 4:156,098,300...156,101,069 		JBrowse link
G Tslp thymic stromal lymphopoietin IAGP MGI PMID:22585305 NCBI chr18:32,948,436...32,952,852
Ensembl chr18:32,948,436...32,952,850 		JBrowse link
abnormal T-helper 2 cell morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ebi3 Epstein-Barr virus induced gene 3 IAGP MGI PMID:15756639 NCBI chr17:56,259,623...56,264,022
Ensembl chr17:56,259,640...56,264,022 		JBrowse link
G Hivep2 human immunodeficiency virus type I enhancer binding protein 2 IAGP MGI PMID:15699073 NCBI chr10:13,841,819...14,027,122
Ensembl chr10:13,841,819...14,027,118 		JBrowse link
G Il1rn interleukin 1 receptor antagonist IAGP MGI PMID:15749858 NCBI chr 2:24,226,872...24,241,503
Ensembl chr 2:24,226,865...24,241,506 		JBrowse link
G Il4ra interleukin 4 receptor, alpha IAGP MGI PMID:14557412 NCBI chr 7:125,151,443...125,178,646
Ensembl chr 7:125,151,292...125,178,646 		JBrowse link
G Lat linker for activation of T cells IAGP MGI PMID:12970761 NCBI chr 7:125,962,999...125,968,877
Ensembl chr 7:125,962,996...125,968,742 		JBrowse link
G Ly9 lymphocyte antigen 9 IAGP MGI PMID:16365421 NCBI chr 1:171,416,181...171,434,978
Ensembl chr 1:171,416,192...171,434,978 		JBrowse link
G Mgl2 macrophage galactose N-acetyl-galactosamine specific lectin 2 IAGP MGI PMID:24076051 NCBI chr11:70,020,953...70,028,368
Ensembl chr11:70,021,155...70,028,376 		JBrowse link
G Rxra retinoid X receptor alpha IAGP MGI PMID:16259011 NCBI chr 2:27,566,457...27,653,331
Ensembl chr 2:27,566,452...27,652,969 		JBrowse link
G Sh2d1a SH2 domain containing 1A IAGP MGI PMID:11404475 NCBI chr  X:41,591,442...41,610,974
Ensembl chr  X:41,591,330...41,618,207 		JBrowse link
abnormal T-helper 2 cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chil1 chitinase-like 1 IAGP MGI PMID:19414556 NCBI chr 1:134,109,894...134,117,769
Ensembl chr 1:134,109,914...134,117,919 		JBrowse link
decreased effector memory T-helper cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Asb2 ankyrin repeat and SOCS box-containing 2 IEA MGI NCBI chr12:103,287,401...103,322,260
Ensembl chr12:103,287,401...103,322,260 		JBrowse link
G Card11 caspase recruitment domain family, member 11 IEA MGI NCBI chr 5:140,858,754...140,986,351
Ensembl chr 5:140,858,745...140,986,337 		JBrowse link
G Cd38 CD38 antigen IEA MGI NCBI chr 5:44,026,151...44,069,716
Ensembl chr 5:44,025,895...44,069,717 		JBrowse link
G Duoxa2 dual oxidase maturation factor 2 IEA MGI NCBI chr 2:122,129,381...122,133,366
Ensembl chr 2:122,129,381...122,133,366 		JBrowse link
G Flt3 FMS-like tyrosine kinase 3 IEA MGI NCBI chr 5:147,267,551...147,337,299
Ensembl chr 5:147,267,551...147,337,299 		JBrowse link
G Hcar1 hydrocarboxylic acid receptor 1 IEA MGI NCBI chr 5:124,014,802...124,018,066
Ensembl chr 5:124,014,799...124,018,083 		JBrowse link
G Mir155 microRNA 155 IAGP MGI PMID:26163372 NCBI chr16:84,511,028...84,511,092
Ensembl chr16:84,511,028...84,511,092 		JBrowse link
G Sik3 SIK family kinase 3 IEA MGI NCBI chr 9:45,924,099...46,135,492
Ensembl chr 9:45,924,118...46,135,492 		JBrowse link
G Socs1 suppressor of cytokine signaling 1 IAGP MGI PMID:26163372 NCBI chr16:10,601,672...10,603,400
Ensembl chr16:10,600,104...10,603,400 		JBrowse link
G Tet1 tet methylcytosine dioxygenase 1 IAGP MGI PMID:35304452 NCBI chr10:62,640,349...62,723,242
Ensembl chr10:62,640,349...62,744,775 		JBrowse link
G Tet2 tet methylcytosine dioxygenase 2 IAGP MGI PMID:35304452 NCBI chr 3:133,169,438...133,250,882
Ensembl chr 3:133,169,440...133,250,900 		JBrowse link
G Tet3 tet methylcytosine dioxygenase 3 IAGP MGI PMID:35304452 NCBI chr 6:83,339,355...83,434,190
Ensembl chr 6:83,339,355...83,436,066 		JBrowse link
G Tmem60 transmembrane protein 60 IEA MGI NCBI chr 5:21,087,451...21,091,868
Ensembl chr 5:21,087,189...21,091,868 		JBrowse link
G Trim9 tripartite motif-containing 9 IEA MGI NCBI chr12:70,291,307...70,394,531
Ensembl chr12:70,291,307...70,394,388 		JBrowse link
decreased KLRG1-positive T-helper cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sik3 SIK family kinase 3 IEA MGI NCBI chr 9:45,924,099...46,135,492
Ensembl chr 9:45,924,118...46,135,492 		JBrowse link
G Tmem127 transmembrane protein 127 IEA MGI NCBI chr 2:127,089,868...127,103,028
Ensembl chr 2:127,089,828...127,103,027 		JBrowse link
decreased T follicular helper cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Batf basic leucine zipper transcription factor, ATF-like IAGP MGI PMID:20421391 NCBI chr12:85,733,494...85,755,861
Ensembl chr12:85,733,443...85,755,861 		JBrowse link
G Bcl6 B cell leukemia/lymphoma 6 IAGP MGI PMID:21636294 PMID:23027924 PMID:23455674 PMID:23980208 NCBI chr16:23,783,800...23,807,623
Ensembl chr16:23,783,802...23,807,602 		JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 IAGP MGI PMID:23997217 NCBI chr 6:128,386,407...128,401,873
Ensembl chr 6:128,386,407...128,401,894 		JBrowse link
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta IAGP MGI PMID:20826752 NCBI chr 4:149,733,625...149,787,023
Ensembl chr 4:149,733,625...149,787,028 		JBrowse link
G Tnfrsf4 tumor necrosis factor receptor superfamily, member 4 IAGP MGI PMID:20826752 NCBI chr 4:156,098,049...156,101,070
Ensembl chr 4:156,098,300...156,101,069 		JBrowse link
G Tnfsf15 tumor necrosis factor (ligand) superfamily, member 15 IAGP MGI PMID:24140642 NCBI chr 4:63,642,837...63,663,296
Ensembl chr 4:63,642,840...63,663,350 		JBrowse link
decreased T helper 1 cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd274 CD274 antigen IAGP MGI PMID:20639491 NCBI chr19:29,339,428...29,365,495
Ensembl chr19:29,344,855...29,365,495 		JBrowse link
G Cd4 CD4 antigen IAGP MGI PMID:35304452 NCBI chr 6:124,841,656...124,865,210
Ensembl chr 6:124,841,655...124,865,184 		JBrowse link
G Cd5 CD5 antigen IAGP MGI PMID:22904299 NCBI chr19:10,695,471...10,716,390
Ensembl chr19:10,694,480...10,716,366 		JBrowse link
G Il1r1 interleukin 1 receptor, type I IAGP MGI PMID:30662948 NCBI chr 1:40,261,651...40,355,361
Ensembl chr 1:40,264,240...40,356,417 		JBrowse link
G Nkg7 natural killer cell group 7 sequence IAGP MGI PMID:32839608 NCBI chr 7:43,086,562...43,087,670
Ensembl chr 7:43,086,497...43,087,673 		JBrowse link
G Slc1a5 solute carrier family 1 (neutral amino acid transporter), member 5 IAGP MGI PMID:24792914 NCBI chr 7:16,515,259...16,532,199
Ensembl chr 7:16,515,265...16,532,199 		JBrowse link
G Tbx21 T-box 21 IAGP MGI PMID:11786644 NCBI chr11:96,988,833...97,006,157
Ensembl chr11:96,988,897...97,006,157 		JBrowse link
G Vsig4 V-set and immunoglobulin domain containing 4 IAGP MGI PMID:30662948 NCBI chr  X:95,290,807...95,337,044
Ensembl chr  X:95,290,809...95,337,044 		JBrowse link
G Zranb1 zinc finger, RAN-binding domain containing 1 IAGP MGI PMID:26808229 NCBI chr 7:132,532,905...132,588,127
Ensembl chr 7:132,532,871...132,588,120 		JBrowse link
decreased T-helper 17 cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5a AT rich interactive domain 5A (MRF1-like) IAGP MGI PMID:23676272 NCBI chr 1:36,346,814...36,363,117
Ensembl chr 1:36,346,814...36,363,110 		JBrowse link
G B9d2 B9 protein domain 2 IAGP MGI PMID:21435587 NCBI chr 7:25,380,205...25,385,987
Ensembl chr 7:25,380,205...25,385,983 		JBrowse link
G Batf basic leucine zipper transcription factor, ATF-like IAGP MGI PMID:20421391 NCBI chr12:85,733,494...85,755,861
Ensembl chr12:85,733,443...85,755,861 		JBrowse link
G Cd274 CD274 antigen IAGP MGI PMID:21061440 NCBI chr19:29,339,428...29,365,495
Ensembl chr19:29,344,855...29,365,495 		JBrowse link
G Cd5 CD5 antigen IAGP MGI PMID:22904299 NCBI chr19:10,695,471...10,716,390
Ensembl chr19:10,694,480...10,716,366 		JBrowse link
G Elavl1 ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R) IAGP MGI PMID:24166976 NCBI chr 8:4,334,781...4,375,104
Ensembl chr 8:4,335,382...4,375,413 		JBrowse link
G Gnai2 guanine nucleotide binding protein (G protein), alpha inhibiting 2 IAGP MGI PMID:22550081 NCBI chr 9:107,491,324...107,512,617
Ensembl chr 9:107,491,324...107,512,566 		JBrowse link
G Il1r1 interleukin 1 receptor, type I IAGP MGI PMID:30662948 NCBI chr 1:40,261,651...40,355,361
Ensembl chr 1:40,264,240...40,356,417 		JBrowse link
G Mir155 microRNA 155 IAGP MGI PMID:26163372 NCBI chr16:84,511,028...84,511,092
Ensembl chr16:84,511,028...84,511,092 		JBrowse link
G Pdcd1 programmed cell death 1 IAGP MGI PMID:22949674 NCBI chr 1:93,966,027...93,980,278
Ensembl chr 1:93,966,027...93,980,278 		JBrowse link
G Pgam1 phosphoglycerate mutase 1 IAGP MGI PMID:32709928 NCBI chr19:41,900,310...41,907,104
Ensembl chr19:41,900,362...41,907,099 		JBrowse link
G Siglech sialic acid binding Ig-like lectin H IAGP MGI PMID:22177923 NCBI chr 7:55,417,916...55,429,196
Ensembl chr 7:55,417,926...55,428,673 		JBrowse link
G Slc1a5 solute carrier family 1 (neutral amino acid transporter), member 5 IAGP MGI PMID:24792914 NCBI chr 7:16,515,259...16,532,199
Ensembl chr 7:16,515,265...16,532,199 		JBrowse link
G Stat3 signal transducer and activator of transcription 3 IAGP MGI PMID:17363300 NCBI chr11:100,777,632...100,830,447
Ensembl chr11:100,775,924...100,830,366 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 IAGP MGI PMID:21435587 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Tnfrsf4 tumor necrosis factor receptor superfamily, member 4 IAGP MGI PMID:21435587 PMID:24166976 NCBI chr 4:156,098,049...156,101,070
Ensembl chr 4:156,098,300...156,101,069 		JBrowse link
G Vsig4 V-set and immunoglobulin domain containing 4 IAGP MGI PMID:30662948 NCBI chr  X:95,290,807...95,337,044
Ensembl chr  X:95,290,809...95,337,044 		JBrowse link
G Zranb1 zinc finger, RAN-binding domain containing 1 IAGP MGI PMID:26808229 NCBI chr 7:132,532,905...132,588,127
Ensembl chr 7:132,532,871...132,588,120 		JBrowse link
decreased T-helper 2 cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chil1 chitinase-like 1 IAGP MGI PMID:19414556 NCBI chr 1:134,109,894...134,117,769
Ensembl chr 1:134,109,914...134,117,919 		JBrowse link
G Ebi3 Epstein-Barr virus induced gene 3 IAGP MGI PMID:12482940 NCBI chr17:56,259,623...56,264,022
Ensembl chr17:56,259,640...56,264,022 		JBrowse link
G Gata3 GATA binding protein 3 IAGP MGI PMID:15475959 NCBI chr 2:9,861,889...9,892,762
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
G Il13 interleukin 13 IAGP MGI PMID:9768762 NCBI chr11:53,522,150...53,525,529
Ensembl chr11:53,522,151...53,525,529 		JBrowse link
G Il25 interleukin 25 IAGP MGI PMID:25888259 NCBI chr14:55,170,152...55,173,294
Ensembl chr14:55,170,152...55,173,294 		JBrowse link
G Il4ra interleukin 4 receptor, alpha IAGP MGI PMID:21460847 NCBI chr 7:125,151,443...125,178,646
Ensembl chr 7:125,151,292...125,178,646 		JBrowse link
G Nfatc2ip nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein IAGP MGI PMID:20133688 NCBI chr 7:125,982,025...125,995,966
Ensembl chr 7:125,982,026...125,995,909 		JBrowse link
G Pdcd1 programmed cell death 1 IAGP MGI PMID:22949674 NCBI chr 1:93,966,027...93,980,278
Ensembl chr 1:93,966,027...93,980,278 		JBrowse link
G Pgam1 phosphoglycerate mutase 1 IAGP MGI PMID:32709928 NCBI chr19:41,900,310...41,907,104
Ensembl chr19:41,900,362...41,907,099 		JBrowse link
G Stat6 signal transducer and activator of transcription 6 IAGP MGI PMID:21460847 NCBI chr10:127,478,855...127,496,856
Ensembl chr10:127,478,855...127,496,826 		JBrowse link
decreased T-helper cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd38 CD38 antigen IEA MGI NCBI chr 5:44,026,151...44,069,716
Ensembl chr 5:44,025,895...44,069,717 		JBrowse link
G Cog6 component of oligomeric golgi complex 6 IEA MGI NCBI chr 3:52,889,544...52,924,644
Ensembl chr 3:52,889,296...52,924,658 		JBrowse link
G Dph6 diphthamine biosynthesis 6 IEA MGI NCBI chr 2:114,346,897...114,485,518
Ensembl chr 2:114,346,897...114,485,445 		JBrowse link
G Gda guanine deaminase IEA MGI NCBI chr19:21,368,671...21,450,025
Ensembl chr19:21,368,671...21,450,809 		JBrowse link
G Gmds GDP-mannose 4, 6-dehydratase IEA MGI NCBI chr13:32,003,566...32,522,744
Ensembl chr13:32,003,562...32,522,723 		JBrowse link
G Hbs1l Hbs1-like (S. cerevisiae) IEA MGI NCBI chr10:21,171,876...21,244,788
Ensembl chr10:21,171,878...21,244,797 		JBrowse link
G Krtap8-1 keratin associated protein 8-1 IEA MGI NCBI chr16:89,284,262...89,284,840
Ensembl chr16:89,284,267...89,284,840 		JBrowse link
G Sik3 SIK family kinase 3 IEA MGI NCBI chr 9:45,924,099...46,135,492
Ensembl chr 9:45,924,118...46,135,492 		JBrowse link
G Tmem126a transmembrane protein 126A IEA MGI NCBI chr 7:90,099,908...90,106,411
Ensembl chr 7:90,099,908...90,106,437 		JBrowse link
G Vps13a vacuolar protein sorting 13A IEA MGI NCBI chr19:16,592,730...16,758,433
Ensembl chr19:16,592,730...16,758,297 		JBrowse link
increased effector memory T-helper cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 3425401B19Rik RIKEN cDNA 3425401B19 gene IEA MGI NCBI chr14:32,381,075...32,430,049
Ensembl chr14:32,381,076...32,407,250 		JBrowse link
G Arpc1b actin related protein 2/3 complex, subunit 1B IEA MGI NCBI chr 5:145,051,066...145,064,996
Ensembl chr 5:145,051,025...145,067,515 		JBrowse link
G Bach2 BTB and CNC homology, basic leucine zipper transcription factor 2 IEA MGI NCBI chr 4:32,238,413...32,586,109
Ensembl chr 4:32,238,804...32,586,108 		JBrowse link
G Bcap31 B cell receptor associated protein 31 IAGP MGI PMID:28333124 NCBI chr  X:72,729,784...72,761,421
Ensembl chr  X:72,729,784...72,759,781 		JBrowse link
G Churc1 churchill domain containing 1 IEA MGI NCBI chr12:76,812,312...76,829,954
Ensembl chr12:76,812,312...76,829,954 		JBrowse link
G Cnpy2 canopy FGF signaling regulator 2 IEA MGI NCBI chr10:128,157,972...128,163,056
Ensembl chr10:128,158,328...128,163,422 		JBrowse link
G Cog6 component of oligomeric golgi complex 6 IEA MGI NCBI chr 3:52,889,544...52,924,644
Ensembl chr 3:52,889,296...52,924,658 		JBrowse link
G Copa coatomer protein complex subunit alpha IAGP MGI PMID:32198142 NCBI chr 1:171,909,885...171,949,899
Ensembl chr 1:171,910,096...171,949,897 		JBrowse link
G Cxcr2 chemokine (C-X-C motif) receptor 2 IEA MGI NCBI chr 1:74,193,153...74,200,405
Ensembl chr 1:74,193,148...74,200,405 		JBrowse link
G Dph6 diphthamine biosynthesis 6 IEA MGI NCBI chr 2:114,346,897...114,485,518
Ensembl chr 2:114,346,897...114,485,445 		JBrowse link
G Foxp3 forkhead box P3 IAGP MGI PMID:27410049 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484 		JBrowse link
G Gda guanine deaminase IEA MGI NCBI chr19:21,368,671...21,450,025
Ensembl chr19:21,368,671...21,450,809 		JBrowse link
G Irak3 interleukin-1 receptor-associated kinase 3 IAGP MGI PMID:24696448 NCBI chr10:119,977,553...120,038,035
Ensembl chr10:119,977,553...120,038,035 		JBrowse link
G Nipsnap3a nipsnap homolog 3A IEA MGI NCBI chr 4:52,989,284...53,000,854
Ensembl chr 4:52,989,272...53,001,162 		JBrowse link
G Nub1 negative regulator of ubiquitin-like proteins 1 IEA MGI NCBI chr 5:24,890,813...24,915,376
Ensembl chr 5:24,890,530...24,915,376 		JBrowse link
G Nup210 nucleoporin 210 IAGP MGI PMID:29736031 NCBI chr 6:90,990,049...91,095,920
Ensembl chr 6:90,990,050...91,093,811 		JBrowse link
G Pdcd1 programmed cell death 1 IAGP MGI PMID:27410049 NCBI chr 1:93,966,027...93,980,278
Ensembl chr 1:93,966,027...93,980,278 		JBrowse link
G Pdgfc platelet-derived growth factor, C polypeptide IEA MGI NCBI chr 3:80,943,723...81,121,347
Ensembl chr 3:80,943,723...81,121,347 		JBrowse link
G Pepd peptidase D IEA MGI NCBI chr 7:34,611,832...34,744,133
Ensembl chr 7:34,611,804...34,744,133 		JBrowse link
G Prdm14 PR domain containing 14 IEA MGI NCBI chr 1:13,183,652...13,197,387
Ensembl chr 1:13,183,681...13,197,387 		JBrowse link
G Rnf128 ring finger protein 128 IEA MGI NCBI chr  X:138,464,089...138,573,894
Ensembl chr  X:138,464,065...138,573,894 		JBrowse link
G Sik3 SIK family kinase 3 IEA MGI NCBI chr 9:45,924,099...46,135,492
Ensembl chr 9:45,924,118...46,135,492 		JBrowse link
G Spred1 sprouty protein with EVH-1 domain 1, related sequence IEA MGI NCBI chr 2:116,951,552...117,012,760
Ensembl chr 2:116,951,855...117,012,760 		JBrowse link
G Tnfaip3 tumor necrosis factor, alpha-induced protein 3 IAGP MGI PMID:35464428 NCBI chr10:18,876,658...18,891,158
Ensembl chr10:18,876,658...18,891,405 		JBrowse link
G Ydjc YdjC homolog (bacterial) IEA MGI NCBI chr16:16,964,813...16,966,721
Ensembl chr16:16,962,485...16,978,565 		JBrowse link
increased KLRG1-positive T-helper cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arpc1b actin related protein 2/3 complex, subunit 1B IEA MGI NCBI chr 5:145,051,066...145,064,996
Ensembl chr 5:145,051,025...145,067,515 		JBrowse link
G Cog6 component of oligomeric golgi complex 6 IEA MGI NCBI chr 3:52,889,544...52,924,644
Ensembl chr 3:52,889,296...52,924,658 		JBrowse link
G Dph6 diphthamine biosynthesis 6 IEA MGI NCBI chr 2:114,346,897...114,485,518
Ensembl chr 2:114,346,897...114,485,445 		JBrowse link
G Sik3 SIK family kinase 3 IEA MGI NCBI chr 9:45,924,099...46,135,492
Ensembl chr 9:45,924,118...46,135,492 		JBrowse link
G Zfp616 zinc finger protein 616 IEA MGI NCBI chr11:73,951,723...73,978,127
Ensembl chr11:73,960,781...73,978,118 		JBrowse link
increased T follicular helper cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd40 CD40 antigen IAGP MGI PMID:30013024 NCBI chr 2:164,897,535...164,913,574
Ensembl chr 2:164,897,547...164,914,868 		JBrowse link
G Foxp3 forkhead box P3 IAGP MGI PMID:31296356 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484 		JBrowse link
G Id3 inhibitor of DNA binding 3 IAGP MGI PMID:21857655 NCBI chr 4:135,871,133...135,872,703
Ensembl chr 4:135,870,808...135,873,066 		JBrowse link
G Ighg1 immunoglobulin heavy constant gamma 1 (G1m marker) IAGP MGI PMID:30013024 NCBI chr12:113,290,161...113,294,143
Ensembl chr12:113,288,860...113,294,143 		JBrowse link
G Ikzf4 IKAROS family zinc finger 4 IAGP MGI PMID:31296356 NCBI chr10:128,466,708...128,505,668
Ensembl chr10:128,466,712...128,505,227 		JBrowse link
G Mir146 microRNA 146 IAGP MGI PMID:30013024 NCBI chr11:43,265,224...43,265,288
Ensembl chr11:43,265,224...43,265,288 		JBrowse link
G Mir146b microRNA 146b IAGP MGI PMID:30013024 NCBI chr19:46,331,201...46,331,309
Ensembl chr19:46,331,201...46,331,309 		JBrowse link
G Pnp purine-nucleoside phosphorylase IEA MGI NCBI chr14:51,181,760...51,190,869
Ensembl chr14:51,168,539...51,202,694 		JBrowse link
G Prdm1 PR domain containing 1, with ZNF domain IAGP MGI PMID:21948081 NCBI chr10:44,313,170...44,404,548
Ensembl chr10:44,313,173...44,404,497 		JBrowse link
G Pten phosphatase and tensin homolog IAGP MGI PMID:20826752 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
G Rc3h1 RING CCCH (C3H) domains 1 IAGP MGI PMID:22700722 PMID:23583642 PMID:23583643 NCBI chr 1:160,733,981...160,802,546
Ensembl chr 1:160,733,988...160,802,548 		JBrowse link
G Rc3h2 ring finger and CCCH-type zinc finger domains 2 IAGP MGI PMID:23583642 PMID:23583643 NCBI chr 2:37,260,078...37,313,007
Ensembl chr 2:37,260,081...37,312,915 		JBrowse link
G Rhoa ras homolog family member A IAGP MGI PMID:29398449 NCBI chr 9:108,183,359...108,215,142
Ensembl chr 9:108,183,328...108,215,133 		JBrowse link
G Rnaseh2b ribonuclease H2, subunit B IAGP MGI PMID:35477763 NCBI chr14:62,569,517...62,610,445
Ensembl chr14:62,530,038...62,610,441 		JBrowse link
G Scarf1 scavenger receptor class F, member 1 IAGP MGI PMID:23892722 NCBI chr11:75,404,310...75,417,408
Ensembl chr11:75,404,366...75,417,408 		JBrowse link
G Tlr7 toll-like receptor 7 IAGP MGI PMID:35477763 NCBI chr  X:166,086,376...166,113,570
Ensembl chr  X:166,087,925...166,113,554 		JBrowse link
G Tnfrsf4 tumor necrosis factor receptor superfamily, member 4 IAGP MGI PMID:20826752 NCBI chr 4:156,098,049...156,101,070
Ensembl chr 4:156,098,300...156,101,069 		JBrowse link
G Tnip1 TNFAIP3 interacting protein 1 IAGP MGI PMID:21606507 NCBI chr11:54,801,613...54,853,766
Ensembl chr11:54,801,611...54,853,743 		JBrowse link
increased T-helper 1 cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 a disintegrin and metallopeptidase domain 17 IAGP MGI PMID:25902485 NCBI chr12:21,373,510...21,423,633
Ensembl chr12:21,373,510...21,423,633 		JBrowse link
G B2m beta-2 microglobulin IAGP MGI PMID:17562770 NCBI chr 2:121,978,168...121,983,563
Ensembl chr 2:121,978,167...121,983,564 		JBrowse link
G B9d2 B9 protein domain 2 IAGP MGI PMID:21435587 NCBI chr 7:25,380,205...25,385,987
Ensembl chr 7:25,380,205...25,385,983 		JBrowse link
G Dusp14 dual specificity phosphatase 14 IAGP MGI PMID:24403530 NCBI chr11:83,938,859...83,960,088
Ensembl chr11:83,938,867...83,960,087 		JBrowse link
G Egfr epidermal growth factor receptor IAGP MGI PMID:25902485 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158 		JBrowse link
G Gata3 GATA binding protein 3 IAGP MGI PMID:15475959 NCBI chr 2:9,861,889...9,892,762
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:23966625 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G Il9r interleukin 9 receptor IAGP MGI PMID:19433802 NCBI chr11:32,137,544...32,155,283
Ensembl chr11:32,137,541...32,150,279 		JBrowse link
G Itgb2 integrin beta 2 IAGP MGI PMID:14634077 NCBI chr10:77,366,164...77,401,542
Ensembl chr10:77,366,086...77,401,542 		JBrowse link
G Lgals9 lectin, galactose binding, soluble 9 IAGP MGI PMID:18282810 NCBI chr11:78,853,805...78,875,750
Ensembl chr11:78,853,800...78,875,772 		JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 IAGP MGI PMID:34420035 NCBI chr18:70,701,298...70,761,769
Ensembl chr18:70,701,260...70,759,202 		JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 IAGP MGI PMID:19501001 NCBI chr11:59,432,395...59,457,781
Ensembl chr11:59,432,394...59,457,782 		JBrowse link
G Nr4a2 nuclear receptor subfamily 4, group A, member 2 IAGP MGI PMID:21468021 NCBI chr 2:56,996,845...57,014,018
Ensembl chr 2:56,996,842...57,014,015 		JBrowse link
G Nup210 nucleoporin 210 IAGP MGI PMID:30323813 NCBI chr 6:90,990,049...91,095,920
Ensembl chr 6:90,990,050...91,093,811 		JBrowse link
G Pdcd1 programmed cell death 1 IAGP MGI PMID:22949674 NCBI chr 1:93,966,027...93,980,278
Ensembl chr 1:93,966,027...93,980,278 		JBrowse link
G Reg3g regenerating islet-derived 3 gamma IAGP MGI PMID:21998396 NCBI chr 6:78,443,252...78,445,857
Ensembl chr 6:78,443,252...78,445,855 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 IAGP MGI PMID:25902485 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Tap1 transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) IAGP MGI PMID:17562770 NCBI chr17:34,406,530...34,416,199
Ensembl chr17:34,406,527...34,416,199 		JBrowse link
G Tgfb1 transforming growth factor, beta 1 IAGP MGI PMID:11342667 PMID:21435587 PMID:23569233 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502 		JBrowse link
G Tnfrsf4 tumor necrosis factor receptor superfamily, member 4 IAGP MGI PMID:21435587 NCBI chr 4:156,098,049...156,101,070
Ensembl chr 4:156,098,300...156,101,069 		JBrowse link
G Tnfsf12 tumor necrosis factor (ligand) superfamily, member 12 IAGP MGI PMID:16325585 NCBI chr11:69,577,066...69,586,924
Ensembl chr11:69,577,076...69,586,675 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator IAGP MGI PMID:21683627 NCBI chr19:3,985,171...3,999,340
Ensembl chr19:3,985,186...3,999,340 		JBrowse link
G Vsig4 V-set and immunoglobulin domain containing 4 IAGP MGI PMID:30662948 NCBI chr  X:95,290,807...95,337,044
Ensembl chr  X:95,290,809...95,337,044 		JBrowse link
G Vtcn1 V-set domain containing T cell activation inhibitor 1 IAGP MGI PMID:21727190 NCBI chr 3:100,732,765...100,804,238
Ensembl chr 3:100,732,775...100,804,238 		JBrowse link
increased T-helper 17 cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ackr4 atypical chemokine receptor 4 IAGP MGI PMID:20562329 NCBI chr 9:103,974,881...104,003,842
Ensembl chr 9:103,961,356...104,004,132 		JBrowse link
G Adam17 a disintegrin and metallopeptidase domain 17 IAGP MGI PMID:25902485 NCBI chr12:21,373,510...21,423,633
Ensembl chr12:21,373,510...21,423,633 		JBrowse link
G Adcyap1 adenylate cyclase activating polypeptide 1 IAGP MGI PMID:23500093 NCBI chr17:93,505,673...93,513,969
Ensembl chr17:93,506,445...93,513,965 		JBrowse link
G Bsg basigin IAGP MGI PMID:25891969 NCBI chr10:79,540,192...79,547,813
Ensembl chr10:79,540,325...79,547,803 		JBrowse link
G Dusp14 dual specificity phosphatase 14 IAGP MGI PMID:24403530 NCBI chr11:83,938,859...83,960,088
Ensembl chr11:83,938,867...83,960,087 		JBrowse link
G Egfr epidermal growth factor receptor IAGP MGI PMID:25902485 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158 		JBrowse link
G Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 IAGP MGI PMID:23241884 NCBI chr19:43,678,128...43,722,292
Ensembl chr19:43,678,111...43,722,136 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:23966625 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G Ier3 immediate early response 3 IAGP MGI PMID:22550081 NCBI chr17:36,132,605...36,133,803
Ensembl chr17:36,132,576...36,133,815 		JBrowse link
G Il17ra interleukin 17 receptor A IAGP MGI PMID:22951726 NCBI chr 6:120,440,143...120,460,692
Ensembl chr 6:120,440,208...120,464,520 		JBrowse link
G Nfil3 nuclear factor, interleukin 3, regulated IAGP MGI PMID:24442434 NCBI chr13:53,121,245...53,136,914
Ensembl chr13:53,121,245...53,135,109 		JBrowse link
G Rag2 recombination activating gene 2 IAGP MGI PMID:17363300 NCBI chr 2:101,455,057...101,462,873
Ensembl chr 2:101,455,063...101,462,874 		JBrowse link
G Siglech sialic acid binding Ig-like lectin H IAGP MGI PMID:22177923 NCBI chr 7:55,417,916...55,429,196
Ensembl chr 7:55,417,926...55,428,673 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 IAGP MGI PMID:25902485 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 IAGP MGI PMID:23633022 NCBI chr12:87,351,832...87,435,129
Ensembl chr12:87,351,832...87,435,129 		JBrowse link
G Unc93b1 unc-93 homolog B1, TLR signaling regulator IAGP MGI PMID:21683627 NCBI chr19:3,985,171...3,999,340
Ensembl chr19:3,985,186...3,999,340 		JBrowse link
G Vsig4 V-set and immunoglobulin domain containing 4 IAGP MGI PMID:30662948 NCBI chr  X:95,290,807...95,337,044
Ensembl chr  X:95,290,809...95,337,044 		JBrowse link
G Vtcn1 V-set domain containing T cell activation inhibitor 1 IAGP MGI PMID:21727190 NCBI chr 3:100,732,765...100,804,238
Ensembl chr 3:100,732,775...100,804,238 		JBrowse link
G Zc3h12d zinc finger CCCH type containing 12D IAGP MGI PMID:24415781 NCBI chr10:7,708,087...7,746,161
Ensembl chr10:7,708,234...7,746,160 		JBrowse link
increased T-helper 2 cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 a disintegrin and metallopeptidase domain 17 IAGP MGI PMID:25902485 NCBI chr12:21,373,510...21,423,633
Ensembl chr12:21,373,510...21,423,633 		JBrowse link
G Apoe apolipoprotein E IAGP MGI PMID:9541503 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113 		JBrowse link
G Egfr epidermal growth factor receptor IAGP MGI PMID:25902485 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158 		JBrowse link
G Il13ra1 interleukin 13 receptor, alpha 1 IAGP MGI PMID:18066066 NCBI chr  X:35,375,761...35,434,915
Ensembl chr  X:35,375,763...35,434,912 		JBrowse link
G Il17b interleukin 17B IAGP MGI PMID:25888259 NCBI chr18:61,821,006...61,825,609
Ensembl chr18:61,817,958...61,825,609 		JBrowse link
G Irf1 interferon regulatory factor 1 IAGP MGI PMID:9379011 NCBI chr11:53,660,841...53,669,200
Ensembl chr11:53,660,841...53,669,200 		JBrowse link
G Lat linker for activation of T cells IAGP MGI PMID:12065839 PMID:23793062 NCBI chr 7:125,962,999...125,968,877
Ensembl chr 7:125,962,996...125,968,742 		JBrowse link
G Mbd2 methyl-CpG binding domain protein 2 IAGP MGI PMID:34420035 NCBI chr18:70,701,298...70,761,769
Ensembl chr18:70,701,260...70,759,202 		JBrowse link
G Mir155 microRNA 155 IAGP MGI PMID:17463290 NCBI chr16:84,511,028...84,511,092
Ensembl chr16:84,511,028...84,511,092 		JBrowse link
G Mmp9 matrix metallopeptidase 9 IAGP MGI PMID:14764732 NCBI chr 2:164,782,246...164,797,770
Ensembl chr 2:164,782,700...164,797,770 		JBrowse link
G Ndfip1 Nedd4 family interacting protein 1 IAGP MGI PMID:22547705 NCBI chr18:38,551,960...38,598,250
Ensembl chr18:38,543,449...38,598,356 		JBrowse link
G Polb polymerase (DNA directed), beta IAGP MGI PMID:24388753 NCBI chr 8:23,118,135...23,143,482
Ensembl chr 8:23,118,142...23,143,451 		JBrowse link
G Ptpn13 protein tyrosine phosphatase, non-receptor type 13 IAGP MGI PMID:19107198 NCBI chr 5:103,573,058...103,746,227
Ensembl chr 5:103,573,058...103,746,169 		JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 IAGP MGI PMID:25902485 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586 		JBrowse link
G Tbx21 T-box 21 IAGP MGI PMID:11786644 NCBI chr11:96,988,833...97,006,157
Ensembl chr11:96,988,897...97,006,157 		JBrowse link
increased T-helper cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Anxa5 annexin A5 IAGP MGI PMID:22692895 NCBI chr 3:36,503,072...36,530,036
Ensembl chr 3:36,503,072...36,530,043 		JBrowse link
G Anxa6 annexin A6 IAGP MGI PMID:22692895 NCBI chr11:54,869,779...54,924,297
Ensembl chr11:54,869,934...54,924,271 		JBrowse link
G Card11 caspase recruitment domain family, member 11 IEA MGI NCBI chr 5:140,858,754...140,986,351
Ensembl chr 5:140,858,745...140,986,337 		JBrowse link
G Col10a1 collagen, type X, alpha 1 IAGP MGI PMID:22692895 NCBI chr10:34,265,977...34,273,081
Ensembl chr10:34,265,977...34,273,081 		JBrowse link
G Duoxa2 dual oxidase maturation factor 2 IEA MGI NCBI chr 2:122,129,381...122,133,366
Ensembl chr 2:122,129,381...122,133,366 		JBrowse link
G Pip4k2c phosphatidylinositol-5-phosphate 4-kinase, type II, gamma IAGP MGI PMID:27313209 NCBI chr10:127,032,936...127,047,508
Ensembl chr10:127,032,936...127,047,454 		JBrowse link
G Pstpip1 proline-serine-threonine phosphatase-interacting protein 1 IEA MGI NCBI chr 9:55,985,729...56,036,174
Ensembl chr 9:55,997,246...56,036,172 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16233
    hematopoietic system phenotype 5190
      abnormal hematopoietic system morphology/development 4732
        abnormal hematopoietic cell morphology 3961
          abnormal leukocyte morphology 2645
            abnormal mononuclear cell morphology 2159
              abnormal lymphocyte morphology 1749
                abnormal T cell morphology 1125
                  abnormal effector T cell morphology 818
                    abnormal T-helper cell morphology 188
                      abnormal CD4-positive helper T cell morphology + 144
                      abnormal T-helper cell number + 133
paths to the root