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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal glomerular capillary morphology
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Accession:MP:0011320 term browser browse the term
Definition:any structural anomaly of the small branching blood vessels in the kidney glomerulus that receives blood from the kidney afferent arterioles; these capillaries are under high pressure for filtering within the glomerulus
Synonyms:exact_synonym: abnormal glomerulus capillary morphology


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abnormal glomerular capillary morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Actn4 actinin alpha 4 IAGP MGI PMID:12782671 NCBI chr 7:28,592,673...28,661,799
Ensembl chr 7:28,592,673...28,661,765 		JBrowse link
G Arhgdia Rho GDP dissociation inhibitor alpha IAGP MGI PMID:10498891 NCBI chr11:120,468,925...120,472,450
Ensembl chr11:120,468,930...120,472,450 		JBrowse link
G Asb4 ankyrin repeat and SOCS box-containing 4 IAGP MGI PMID:27821757 NCBI chr 6:5,383,386...5,433,022
Ensembl chr 6:5,383,386...5,433,022 		JBrowse link
G Bcam basal cell adhesion molecule IAGP MGI PMID:18032551 NCBI chr 7:19,490,063...19,504,457
Ensembl chr 7:19,490,056...19,504,941 		JBrowse link
G Bcl2l11 BCL2 like 11 IAGP MGI PMID:18275831 NCBI chr 2:127,967,958...128,004,467
Ensembl chr 2:127,967,958...128,004,467 		JBrowse link
G Bdkrb2 bradykinin receptor, beta 2 IAGP MGI PMID:12560214 NCBI chr12:105,529,431...105,561,503
Ensembl chr12:105,529,485...105,561,496 		JBrowse link
G Cd151 CD151 antigen IAGP MGI PMID:17015618 NCBI chr 7:141,047,275...141,051,394
Ensembl chr 7:141,047,305...141,051,386 		JBrowse link
G Cfh complement component factor h IAGP MGI PMID:28057640 NCBI chr 1:140,013,593...140,111,149
Ensembl chr 1:140,012,446...140,111,502 		JBrowse link
G Clu clusterin IAGP MGI PMID:11865066 NCBI chr14:66,206,093...66,218,992
Ensembl chr14:66,205,932...66,218,996 		JBrowse link
G Col4a3 collagen, type IV, alpha 3 IAGP MGI PMID:8947561 PMID:8956999 NCBI chr 1:82,564,647...82,699,778
Ensembl chr 1:82,564,642...82,699,780 		JBrowse link
G Col4a5 collagen, type IV, alpha 5 IAGP MGI PMID:15153557 NCBI chr  X:140,258,367...140,472,232
Ensembl chr  X:140,258,381...140,472,230 		JBrowse link
G Coq6 coenzyme Q6 monooxygenase IAGP MGI PMID:30737270 NCBI chr12:84,408,530...84,420,570
Ensembl chr12:84,408,431...84,420,570 		JBrowse link
G Crim1 cysteine rich transmembrane BMP regulator 1 IAGP MGI PMID:17460146 NCBI chr17:78,507,602...78,684,021
Ensembl chr17:78,507,677...78,684,021 		JBrowse link
G Ebi3 Epstein-Barr virus induced gene 3 IAGP MGI PMID:18779924 NCBI chr17:56,259,623...56,264,022
Ensembl chr17:56,259,640...56,264,022 		JBrowse link
G Ehd3 EH-domain containing 3 IAGP MGI PMID:21408024 NCBI chr17:74,111,836...74,139,088
Ensembl chr17:74,111,129...74,139,089 		JBrowse link
G Ehd4 EH-domain containing 4 IAGP MGI PMID:21408024 NCBI chr 2:119,919,958...119,985,028
Ensembl chr 2:119,919,656...119,985,087 		JBrowse link
G Fas Fas cell surface death receptor IAGP MGI PMID:12097414 PMID:18275831 PMID:18779924 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172 		JBrowse link
G Fras1 Fraser extracellular matrix complex subunit 1 IAGP MGI PMID:22730198 NCBI chr 5:96,518,622...96,932,592
Ensembl chr 5:96,521,814...96,932,587 		JBrowse link
G Ifng interferon gamma IAGP MGI PMID:12097414 NCBI chr10:118,276,951...118,281,799
Ensembl chr10:118,276,951...118,281,797 		JBrowse link
G Ilk integrin linked kinase IAGP MGI PMID:16611717 NCBI chr 7:105,385,797...105,392,132
Ensembl chr 7:105,385,799...105,392,132 		JBrowse link
G Ins2 insulin II IAGP MGI PMID:22297672 NCBI chr 7:142,232,393...142,233,463
Ensembl chr 7:142,232,393...142,297,118 		JBrowse link
G Itga1 integrin alpha 1 IAGP MGI PMID:22297672 NCBI chr13:115,094,615...115,238,500
Ensembl chr13:115,089,632...115,238,500 		JBrowse link
G Itgb1 integrin beta 1 (fibronectin receptor beta) IAGP MGI PMID:18328474 NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681 		JBrowse link
G Jag1 jagged 1 IAGP MGI PMID:11171333 NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564 		JBrowse link
G Junb jun B proto-oncogene IAGP MGI PMID:19918056 NCBI chr 8:85,703,538...85,705,377
Ensembl chr 8:85,701,113...85,705,347 		JBrowse link
G Lama5 laminin, alpha 5 IAGP MGI PMID:10625553 NCBI chr 2:179,818,166...179,867,652
Ensembl chr 2:179,818,166...179,867,652 		JBrowse link
G Lcat lecithin cholesterol acyltransferase IAGP MGI PMID:15466392 NCBI chr 8:106,666,183...106,670,034
Ensembl chr 8:106,666,183...106,670,014 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta IAGP MGI PMID:11956245 NCBI chr 2:33,450,977...33,531,219
Ensembl chr 2:33,450,977...33,530,620 		JBrowse link
G Mark2 MAP/microtubule affinity regulating kinase 2 IAGP MGI PMID:11287624 NCBI chr19:7,252,761...7,319,222
Ensembl chr19:7,252,761...7,319,225 		JBrowse link
G Mgp matrix Gla protein IAGP MGI PMID:21765215 NCBI chr 6:136,849,433...136,852,821
Ensembl chr 6:136,849,433...136,852,821 		JBrowse link
G Mocos molybdenum cofactor sulfurase IAGP MGI PMID:35372998 NCBI chr18:24,786,538...24,834,634
Ensembl chr18:24,786,748...24,834,632 		JBrowse link
G Mpv17 MpV17 mitochondrial inner membrane protein IAGP MGI PMID:1696177 NCBI chr 5:31,298,007...31,311,595
Ensembl chr 5:31,297,998...31,311,595 		JBrowse link
G Myo1e myosin IE IAGP MGI PMID:19005011 NCBI chr 9:70,114,632...70,307,349
Ensembl chr 9:70,114,632...70,307,048 		JBrowse link
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 IAGP MGI PMID:11576348 NCBI chr 2:75,505,860...75,535,007
Ensembl chr 2:75,505,857...75,534,985 		JBrowse link
G Notch2 notch 2 IAGP MGI PMID:11171333 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677 		JBrowse link
G Nphs2 nephrosis 2, podocin IAGP MGI PMID:14701729 PMID:18288100 NCBI chr 1:156,138,105...156,155,605
Ensembl chr 1:156,138,297...156,155,605 		JBrowse link
G Pja2 praja ring finger ubiquitin ligase 2 IAGP MGI PMID:38379085 NCBI chr17:64,588,001...64,638,878
Ensembl chr17:64,588,000...64,638,911 		JBrowse link
G Pten phosphatase and tensin homolog IAGP MGI PMID:17540362 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560 		JBrowse link
G Rrm2b ribonucleotide reductase M2 B (TP53 inducible) IAGP MGI PMID:15723268 NCBI chr15:37,924,196...37,961,562
Ensembl chr15:37,924,196...37,961,562 		JBrowse link
G Tcf21 transcription factor 21 IAGP MGI PMID:10572052 NCBI chr10:22,693,162...22,696,042
Ensembl chr10:22,693,180...22,696,073 		JBrowse link
G Tcrb T cell receptor beta chain IAGP MGI PMID:22585710 NCBI chr 6:40,868,230...41,535,305 JBrowse link
G Tcrd T cell receptor delta chain IAGP MGI PMID:22585710 NCBI chr14:54,183,530...54,396,655 JBrowse link
G Traf3ip2 TRAF3 interacting protein 2 IAGP MGI PMID:22585710 NCBI chr10:39,488,930...39,531,303
Ensembl chr10:39,488,930...39,531,303 		JBrowse link
G Vegfa vascular endothelial growth factor A IAGP MGI PMID:12039984 PMID:12618525 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
G Wt1 WT1 transcription factor IAGP MGI PMID:10077614 NCBI chr 2:104,956,874...105,003,959
Ensembl chr 2:104,956,874...105,003,961 		JBrowse link
abnormal glomerular capillary endothelium morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apela apelin receptor early endogenous ligand IAGP MGI PMID:28663440 NCBI chr 8:65,481,069...65,489,970
Ensembl chr 8:65,481,069...65,489,988 		JBrowse link
G Arhgdia Rho GDP dissociation inhibitor alpha IAGP MGI PMID:10498891 NCBI chr11:120,468,925...120,472,450
Ensembl chr11:120,468,930...120,472,450 		JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 IAGP MGI PMID:9794553 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004 		JBrowse link
G Cd151 CD151 antigen IAGP MGI PMID:17015618 NCBI chr 7:141,047,275...141,051,394
Ensembl chr 7:141,047,305...141,051,386 		JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A IAGP MGI PMID:11970874 NCBI chr17:29,309,953...29,319,696
Ensembl chr17:29,309,950...29,319,701 		JBrowse link
G Cfh complement component factor h IAGP MGI PMID:28057640 NCBI chr 1:140,013,593...140,111,149
Ensembl chr 1:140,012,446...140,111,502 		JBrowse link
G Clic5 chloride intracellular channel 5 IAGP MGI PMID:20335315 NCBI chr17:44,445,671...44,591,059
Ensembl chr17:44,445,659...44,591,059 		JBrowse link
G Crim1 cysteine rich transmembrane BMP regulator 1 IAGP MGI PMID:17460146 NCBI chr17:78,507,602...78,684,021
Ensembl chr17:78,507,677...78,684,021 		JBrowse link
G Ehd3 EH-domain containing 3 IAGP MGI PMID:21408024 NCBI chr17:74,111,836...74,139,088
Ensembl chr17:74,111,129...74,139,089 		JBrowse link
G Ehd4 EH-domain containing 4 IAGP MGI PMID:21408024 NCBI chr 2:119,919,958...119,985,028
Ensembl chr 2:119,919,656...119,985,087 		JBrowse link
G Fas Fas cell surface death receptor IAGP MGI PMID:12571859 PMID:17142777 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172 		JBrowse link
G Fbln1 fibulin 1 IAGP MGI PMID:11564885 NCBI chr15:85,090,150...85,170,495
Ensembl chr15:85,090,150...85,170,736 		JBrowse link
G Fcer1g Fc receptor, IgE, high affinity I, gamma polypeptide IAGP MGI PMID:12571859 NCBI chr 1:171,057,141...171,061,918
Ensembl chr 1:171,057,141...171,061,934 		JBrowse link
G Gadd45a growth arrest and DNA-damage-inducible 45 alpha IAGP MGI PMID:11970874 NCBI chr 6:67,012,080...67,014,391
Ensembl chr 6:67,012,080...67,014,441 		JBrowse link
G Gdnf glial cell line derived neurotrophic factor IAGP MGI PMID:20943767 NCBI chr15:7,839,529...7,867,061
Ensembl chr15:7,840,327...7,867,056 		JBrowse link
G Lama5 laminin, alpha 5 IAGP MGI PMID:10625553 NCBI chr 2:179,818,166...179,867,652
Ensembl chr 2:179,818,166...179,867,652 		JBrowse link
G Ldb1 LIM domain binding 1 IAGP MGI PMID:17316599 NCBI chr19:46,019,963...46,036,584
Ensembl chr19:46,020,009...46,033,653 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta IAGP MGI PMID:11956245 NCBI chr 2:33,450,977...33,531,219
Ensembl chr 2:33,450,977...33,530,620 		JBrowse link
G Nos3 nitric oxide synthase 3, endothelial cell IAGP MGI PMID:19036847 NCBI chr 5:24,569,772...24,589,472
Ensembl chr 5:24,569,808...24,589,472 		JBrowse link
G Notch2 notch 2 IAGP MGI PMID:11171333 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677 		JBrowse link
G Nphs2 nephrosis 2, podocin IAGP MGI PMID:14701729 PMID:18288100 NCBI chr 1:156,138,105...156,155,605
Ensembl chr 1:156,138,297...156,155,605 		JBrowse link
G Rrm2b ribonucleotide reductase M2 B (TP53 inducible) IAGP MGI PMID:15723268 NCBI chr15:37,924,196...37,961,562
Ensembl chr15:37,924,196...37,961,562 		JBrowse link
G Selp selectin, platelet IAGP MGI PMID:17142777 NCBI chr 1:163,942,833...163,977,595
Ensembl chr 1:163,942,833...163,977,595 		JBrowse link
G Stox1 storkhead box 1 IAGP MGI PMID:33301424 NCBI chr10:62,494,822...62,561,907
Ensembl chr10:62,494,822...62,561,907 		JBrowse link
G Vegfa vascular endothelial growth factor A IAGP MGI PMID:12039984 PMID:12618525 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
abnormal glomerular endothelium fenestra morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd151 CD151 antigen IAGP MGI PMID:17015618 NCBI chr 7:141,047,275...141,051,394
Ensembl chr 7:141,047,305...141,051,386 		JBrowse link
G Clic5 chloride intracellular channel 5 IAGP MGI PMID:20335315 NCBI chr17:44,445,671...44,591,059
Ensembl chr17:44,445,659...44,591,059 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:38797325 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,055,336 		JBrowse link
G Nphs2 nephrosis 2, podocin IAGP MGI PMID:18288100 NCBI chr 1:156,138,105...156,155,605
Ensembl chr 1:156,138,297...156,155,605 		JBrowse link
G Rrm2b ribonucleotide reductase M2 B (TP53 inducible) IAGP MGI PMID:15723268 NCBI chr15:37,924,196...37,961,562
Ensembl chr15:37,924,196...37,961,562 		JBrowse link
G Zfyve21 zinc finger, FYVE domain containing 21 IAGP MGI PMID:38797325 NCBI chr12:111,780,600...111,794,822
Ensembl chr12:111,780,604...111,798,626 		JBrowse link
absent glomerular endothelium fenestra term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apela apelin receptor early endogenous ligand IAGP MGI PMID:28663440 NCBI chr 8:65,481,069...65,489,970
Ensembl chr 8:65,481,069...65,489,988 		JBrowse link
G Crim1 cysteine rich transmembrane BMP regulator 1 IAGP MGI PMID:17460146 NCBI chr17:78,507,602...78,684,021
Ensembl chr17:78,507,677...78,684,021 		JBrowse link
G Ehd3 EH-domain containing 3 IAGP MGI PMID:21408024 NCBI chr17:74,111,836...74,139,088
Ensembl chr17:74,111,129...74,139,089 		JBrowse link
G Ehd4 EH-domain containing 4 IAGP MGI PMID:21408024 NCBI chr 2:119,919,958...119,985,028
Ensembl chr 2:119,919,656...119,985,087 		JBrowse link
G Foxc2 forkhead box C2 IAGP MGI PMID:16498405 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Ldb1 LIM domain binding 1 IAGP MGI PMID:17316599 NCBI chr19:46,019,963...46,036,584
Ensembl chr19:46,020,009...46,033,653 		JBrowse link
G Lmx1b LIM homeobox transcription factor 1 beta IAGP MGI PMID:11956245 NCBI chr 2:33,450,977...33,531,219
Ensembl chr 2:33,450,977...33,530,620 		JBrowse link
G Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 IAGP MGI PMID:25271328 NCBI chr 5:19,431,787...20,909,790
Ensembl chr 5:19,432,034...20,909,790 		JBrowse link
G Vegfa vascular endothelial growth factor A IAGP MGI PMID:12618525 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
decreased glomerular capillary number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fbln1 fibulin 1 IAGP MGI PMID:11564885 NCBI chr15:85,090,150...85,170,495
Ensembl chr15:85,090,150...85,170,736 		JBrowse link
G Foxc2 forkhead box C2 IAGP MGI PMID:16498405 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Gdnf glial cell line derived neurotrophic factor IAGP MGI PMID:20943767 NCBI chr15:7,839,529...7,867,061
Ensembl chr15:7,840,327...7,867,056 		JBrowse link
G Itga3 integrin alpha 3 IAGP MGI PMID:8951069 NCBI chr11:94,935,301...94,967,637
Ensembl chr11:94,935,300...94,967,627 		JBrowse link
G Pdgfrb platelet derived growth factor receptor, beta polypeptide IAGP MGI PMID:7958864 NCBI chr18:61,178,194...61,218,139
Ensembl chr18:61,178,222...61,218,133 		JBrowse link
G Pkhd1 polycystic kidney and hepatic disease 1 IAGP MGI PMID:18235088 NCBI chr 1:20,128,003...20,688,306
Ensembl chr 1:20,128,003...20,688,288 		JBrowse link
G Rrm2b ribonucleotide reductase M2 B (TP53 inducible) IAGP MGI PMID:15723268 NCBI chr15:37,924,196...37,961,562
Ensembl chr15:37,924,196...37,961,562 		JBrowse link
G Vegfa vascular endothelial growth factor A IAGP MGI PMID:12039984 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295 		JBrowse link
dilated glomerular capillary term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E IAGP MGI PMID:12177238 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113 		JBrowse link
G Cmas cytidine monophospho-N-acetylneuraminic acid synthetase IAGP MGI PMID:31040189 NCBI chr 6:142,702,468...142,721,440
Ensembl chr 6:142,702,412...142,721,440 		JBrowse link
G Col4a1 collagen, type IV, alpha 1 IAGP MGI PMID:26260163 NCBI chr 8:11,248,423...11,362,889
Ensembl chr 8:11,248,423...11,362,826 		JBrowse link
G Col4a5 collagen, type IV, alpha 5 IAGP MGI PMID:15153557 NCBI chr  X:140,258,367...140,472,232
Ensembl chr  X:140,258,381...140,472,230 		JBrowse link
G Crim1 cysteine rich transmembrane BMP regulator 1 IAGP MGI PMID:17460146 PMID:19776720 NCBI chr17:78,507,602...78,684,021
Ensembl chr17:78,507,677...78,684,021 		JBrowse link
G Fbln1 fibulin 1 IAGP MGI PMID:11564885 NCBI chr15:85,090,150...85,170,495
Ensembl chr15:85,090,150...85,170,736 		JBrowse link
G Foxc2 forkhead box C2 IAGP MGI PMID:16498405 NCBI chr 8:121,842,910...121,845,634
Ensembl chr 8:121,842,910...121,845,634 		JBrowse link
G Itga3 integrin alpha 3 IAGP MGI PMID:8951069 NCBI chr11:94,935,301...94,967,637
Ensembl chr11:94,935,300...94,967,627 		JBrowse link
G Itgb1 integrin beta 1 (fibronectin receptor beta) IAGP MGI PMID:18328474 NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681 		JBrowse link
G Nphs2 nephrosis 2, podocin IAGP MGI PMID:18288100 NCBI chr 1:156,138,105...156,155,605
Ensembl chr 1:156,138,297...156,155,605 		JBrowse link
G Pdgfb platelet derived growth factor, B polypeptide IAGP MGI PMID:12897053 PMID:15084468 NCBI chr15:79,880,066...79,899,178
Ensembl chr15:79,880,075...79,899,178 		JBrowse link
G Prkci protein kinase C, iota IAGP MGI PMID:19142224 NCBI chr 3:31,049,893...31,106,889
Ensembl chr 3:31,049,896...31,107,108 		JBrowse link
G Vhl von Hippel-Lindau tumor suppressor IAGP MGI PMID:20522651 NCBI chr 6:113,600,955...113,608,595
Ensembl chr 6:113,600,920...113,608,594 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 17258
    cardiovascular system phenotype 4192
      abnormal cardiovascular system morphology 3287
        abnormal blood vessel morphology 1824
          abnormal kidney vasculature morphology 105
            abnormal kidney capillary morphology 73
              abnormal glomerular capillary morphology 70
                abnormal glomerular capillary endothelium morphology + 29
                decreased glomerular capillary number 8
                dilated glomerular capillary 13
Path 2
Term Annotations click to browse term
  mammalian phenotype 17258
    renal/urinary system phenotype 2179
      abnormal renal/urinary system morphology 1817
        abnormal kidney morphology 1627
          abnormal nephron morphology 623
            abnormal renal corpuscle morphology 452
              abnormal renal glomerulus morphology 417
                abnormal glomerular capillary morphology 70
                  abnormal glomerular capillary endothelium morphology + 29
                  decreased glomerular capillary number 8
                  dilated glomerular capillary 13
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