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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal inner ear development
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Accession:MP:0011238 term browser browse the term
Definition:atypical initial production, differentiation, migration or maturation of the labyrinth, including the semicircular canals, vestibule and cochlea


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abnormal inner ear development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr active BCR-related gene IAGP MGI PMID:11921339 NCBI chr11:76,307,560...76,468,515
Ensembl chr11:76,307,560...76,514,384 		JBrowse link
G Bcr BCR activator of RhoGEF and GTPase IAGP MGI PMID:11921339 NCBI chr10:74,896,384...75,020,753
Ensembl chr10:74,896,424...75,020,753 		JBrowse link
G Cachd1 cache domain containing 1 IAGP MGI PMID:34388681 NCBI chr 4:100,633,870...100,861,741
Ensembl chr 4:100,633,872...100,886,417 		JBrowse link
G Chrd chordin IAGP MGI PMID:10688202 NCBI chr16:20,551,528...20,561,132
Ensembl chr16:20,551,877...20,561,134 		JBrowse link
G Gata3 GATA binding protein 3 IAGP MGI PMID:23666531 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
G Gli3 GLI-Kruppel family member GLI3 IAGP MGI PMID:6049666 NCBI chr13:15,638,308...15,904,611
Ensembl chr13:15,637,820...15,904,611 		JBrowse link
G Hspg2 perlecan (heparan sulfate proteoglycan 2) IAGP MGI PMID:10579729 NCBI chr 4:137,196,062...137,297,941
Ensembl chr 4:137,196,080...137,297,941 		JBrowse link
G Lrig1 leucine-rich repeats and immunoglobulin-like domains 1 IAGP MGI PMID:24086156 NCBI chr 6:94,581,510...94,677,205
Ensembl chr 6:94,581,510...94,677,139 		JBrowse link
G Lrig3 leucine-rich repeats and immunoglobulin-like domains 3 IAGP MGI PMID:24086156 NCBI chr10:125,802,088...125,851,228
Ensembl chr10:125,802,037...125,851,228 		JBrowse link
G Pax2 paired box 2 IAGP MGI PMID:8943028 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,735,057...44,826,310 		JBrowse link
G Rubie RNA upstream of Bmp4 expressed in inner ear IAGP MGI PMID:22253730 NCBI chr14:46,805,788...46,813,308
Ensembl chr14:46,805,720...46,835,882 		JBrowse link
abnormal vestibular hair cell development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pou4f3 POU domain, class 4, transcription factor 3 IAGP MGI PMID:9735355 PMID:12585968 NCBI chr18:42,527,662...42,529,158
Ensembl chr18:42,527,604...42,530,314 		JBrowse link
delayed inner ear development term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Duox2 dual oxidase 2 IAGP MGI PMID:17440044 NCBI chr 2:122,109,727...122,129,221
Ensembl chr 2:122,109,728...122,128,930 		JBrowse link
G Gata3 GATA binding protein 3 IAGP MGI PMID:11135239 PMID:15499560 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845 		JBrowse link
G Igf1 insulin-like growth factor 1 IAGP MGI PMID:11567053 NCBI chr10:87,694,127...87,772,909
Ensembl chr10:87,694,127...87,772,904 		JBrowse link
G Pax8 paired box 8 IAGP MGI PMID:14981357 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
G Thra thyroid hormone receptor alpha IAGP MGI PMID:11739587 NCBI chr11:98,631,539...98,659,832
Ensembl chr11:98,631,464...98,659,832 		JBrowse link
G Thrb thyroid hormone receptor beta IAGP MGI PMID:8673137 PMID:11739587 NCBI chr14:4,429,599...4,810,538
Ensembl chr14:4,431,611...4,809,435 		JBrowse link
G Tpo thyroid peroxidase IAGP MGI PMID:24297261 NCBI chr12:30,104,658...30,182,983
Ensembl chr12:30,104,658...30,182,623 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 17257
    hearing/vestibular/ear phenotype 1012
      abnormal ear morphology 574
        abnormal ear development 78
          abnormal inner ear development 18
            abnormal vestibular hair cell development 1
            delayed inner ear development 7
paths to the root