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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal brain ependyma motile cilium morphology
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Accession:MP:0011056 term browser browse the term
Definition:any structural anomaly of the tiny, motile hair-like projections from the epithelial cells that line the ventricles in the brain, which beat in concert and to move cerebrospinal fluid
Synonyms:exact_synonym: abnormal brain ependyma motile cilia morphology
 narrow_synonym: abnormal brain ventricle motile cilium morphology


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abnormal brain ependyma motile cilium morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 IAGP MGI PMID:38100419 NCBI chr10:41,179,433...41,309,565
Ensembl chr10:41,179,976...41,310,530 		JBrowse link
G Arl6 ADP-ribosylation factor-like 6 IAGP MGI PMID:22139371 NCBI chr16:59,433,312...59,459,772
Ensembl chr16:59,433,312...59,459,754 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 IAGP MGI PMID:23572516 NCBI chr 3:36,627,291...36,667,639
Ensembl chr 3:36,627,291...36,667,626 		JBrowse link
G Ccdc39 coiled-coil domain containing 39 IAGP MGI PMID:29317443 NCBI chr 3:33,864,906...33,898,473
Ensembl chr 3:33,866,511...33,898,459 		JBrowse link
G Ccp110 centriolar coiled coil protein 110 IAGP MGI PMID:26965371 NCBI chr 7:118,311,740...118,336,247
Ensembl chr 7:118,311,775...118,336,247 		JBrowse link
G Cfap70 cilia and flagella associated protein 70 IAGP MGI PMID:37352829 NCBI chr14:20,444,258...20,502,332
Ensembl chr14:20,444,261...20,502,294 		JBrowse link
G Col18a1 collagen, type XVIII, alpha 1 IAGP MGI PMID:15254016 NCBI chr10:76,888,013...77,002,351
Ensembl chr10:76,888,012...77,002,382 		JBrowse link
G Dnaaf2 dynein, axonemal assembly factor 2 IAGP MGI PMID:23525783 NCBI chr12:69,235,861...69,245,203
Ensembl chr12:69,235,861...69,245,203 		JBrowse link
G Dnaaf5 dynein, axonemal assembly factor 5 IAGP MGI PMID:37104040 NCBI chr 5:139,135,888...139,172,265
Ensembl chr 5:139,135,978...139,172,265 		JBrowse link
G Emx1 empty spiracles homeobox 1 IAGP MGI PMID:22705452 NCBI chr 6:85,164,913...85,181,445
Ensembl chr 6:85,164,420...85,181,444 		JBrowse link
G Hydin HYDIN, axonemal central pair apparatus protein IAGP MGI PMID:18250199 NCBI chr 8:110,993,600...111,336,885
Ensembl chr 8:110,993,609...111,336,885 		JBrowse link
G Jhy junctional cadherin complex regulator IAGP MGI PMID:23906841 NCBI chr 9:40,806,147...40,877,560
Ensembl chr 9:40,806,145...40,875,414 		JBrowse link
G Kif6 kinesin family member 6 IAGP MGI PMID:30475797 NCBI chr17:49,922,121...50,216,875
Ensembl chr17:49,922,164...50,216,875 		JBrowse link
G Mcidas multiciliate differentiation and DNA synthesis associated cell cycle protein IAGP MGI PMID:30877126 NCBI chr13:113,130,104...113,138,233
Ensembl chr13:113,130,379...113,136,928 		JBrowse link
G Odf2 outer dense fiber of sperm tails 2 IAGP MGI PMID:22265411 NCBI chr 2:29,779,026...29,821,758
Ensembl chr 2:29,779,233...29,821,758 		JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein IAGP MGI PMID:27336173 NCBI chr 9:113,480,812...113,537,457
Ensembl chr 9:113,480,812...113,537,327 		JBrowse link
G Pfdn5 prefoldin 5 IAGP MGI PMID:20956523 NCBI chr15:102,234,551...102,239,925
Ensembl chr15:102,234,551...102,240,308 		JBrowse link
G Ptbp1 polypyrimidine tract binding protein 1 IAGP MGI PMID:22705452 NCBI chr10:79,690,502...79,700,269
Ensembl chr10:79,690,261...79,700,605 		JBrowse link
G Rfx4 regulatory factor X, 4 (influences HLA class II expression) IAGP MGI PMID:19887680 NCBI chr10:84,591,895...84,742,402
Ensembl chr10:84,591,926...84,742,402 		JBrowse link
G Rsph9 radial spoke head 9 homolog (Chlamydomonas) IAGP MGI PMID:32709945 NCBI chr17:46,432,964...46,455,171
Ensembl chr17:46,432,961...46,455,142 		JBrowse link
G Tmem67 transmembrane protein 67 IAGP MGI PMID:23283079 NCBI chr 4:12,039,355...12,090,020
Ensembl chr 4:12,039,363...12,090,020 		JBrowse link
G Ulk4 unc-51-like kinase 4 IAGP MGI PMID:27445138 NCBI chr 9:120,793,520...121,115,225
Ensembl chr 9:120,784,417...121,106,263 		JBrowse link
G Zmynd10 zinc finger, MYND domain containing 10 IAGP MGI PMID:29601588 NCBI chr 9:107,424,067...107,428,520
Ensembl chr 9:107,424,497...107,428,518 		JBrowse link
abnormal brain ependyma motile cilium location or orientation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccdc88c coiled-coil domain containing 88C IAGP MGI PMID:32535020 NCBI chr12:100,877,778...100,995,610
Ensembl chr12:100,877,782...100,995,315 		JBrowse link
G Cep164 centrosomal protein 164 IAGP MGI PMID:29244804 NCBI chr 9:45,678,244...45,739,984
Ensembl chr 9:45,678,244...45,739,989 		JBrowse link
G Cetn2 centrin 2 IAGP MGI PMID:24790208 NCBI chr  X:71,957,137...71,961,967
Ensembl chr  X:71,957,138...71,962,017 		JBrowse link
G Dnaaf2 dynein, axonemal assembly factor 2 IAGP MGI PMID:23525783 NCBI chr12:69,235,861...69,245,203
Ensembl chr12:69,235,861...69,245,203 		JBrowse link
G Jhy junctional cadherin complex regulator IAGP MGI PMID:23906841 NCBI chr 9:40,806,147...40,877,560
Ensembl chr 9:40,806,145...40,875,414 		JBrowse link
G Pdcd6ip programmed cell death 6 interacting protein IAGP MGI PMID:27336173 NCBI chr 9:113,480,812...113,537,457
Ensembl chr 9:113,480,812...113,537,327 		JBrowse link
absent brain ependyma motile cilia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdc42 cell division cycle 42 IAGP MGI PMID:23150167 NCBI chr 4:137,047,011...137,085,007
Ensembl chr 4:137,047,007...137,085,031 		JBrowse link
G Cep120 centrosomal protein 120 IAGP MGI PMID:25251415 NCBI chr18:53,814,795...53,877,825
Ensembl chr18:53,814,795...53,877,680 		JBrowse link
G Cfap54 cilia and flagella associated protein 54 IAGP MGI PMID:26224312 NCBI chr10:92,611,471...92,919,085
Ensembl chr10:92,611,481...92,917,480 		JBrowse link
G Foxj1 forkhead box J1 IAGP MGI PMID:9739041 PMID:10873152 NCBI chr11:116,221,530...116,226,331
Ensembl chr11:116,221,530...116,226,225 		JBrowse link
G Gmnc geminin coiled-coil domain containing IAGP MGI PMID:26933123 NCBI chr16:26,775,985...26,810,424
Ensembl chr16:26,732,303...26,810,402 		JBrowse link
G Ulk4 unc-51-like kinase 4 IAGP MGI PMID:27445138 NCBI chr 9:120,793,520...121,115,225
Ensembl chr 9:120,784,417...121,106,263 		JBrowse link
G Wasl WASP like actin nucleation promoting factor IAGP MGI PMID:24462670 NCBI chr 6:24,613,809...24,665,185
Ensembl chr 6:24,613,804...24,665,008 		JBrowse link
decreased brain ependyma motile cilium length term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ak9 adenylate kinase 9 IAGP MGI PMID:38100419 NCBI chr10:41,179,433...41,309,565
Ensembl chr10:41,179,976...41,310,530 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 IAGP MGI PMID:23572516 NCBI chr 3:36,627,291...36,667,639
Ensembl chr 3:36,627,291...36,667,626 		JBrowse link
G Hoatz HOATZ cilia and flagella associated protein IAGP MGI PMID:32248064 NCBI chr 9:50,992,610...51,017,183
Ensembl chr 9:50,992,415...51,013,378 		JBrowse link
G Jhy junctional cadherin complex regulator IAGP MGI PMID:23906841 NCBI chr 9:40,806,147...40,877,560
Ensembl chr 9:40,806,145...40,875,414 		JBrowse link
G Trip6 thyroid hormone receptor interactor 6 IAGP MGI PMID:34620853 NCBI chr 5:137,308,160...137,312,469
Ensembl chr 5:137,307,916...137,312,666 		JBrowse link
G Ulk4 unc-51-like kinase 4 IAGP MGI PMID:21746835 NCBI chr 9:120,793,520...121,115,225
Ensembl chr 9:120,784,417...121,106,263 		JBrowse link
decreased brain ependyma motile cilium number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arl6 ADP-ribosylation factor-like 6 IAGP MGI PMID:22139371 NCBI chr16:59,433,312...59,459,772
Ensembl chr16:59,433,312...59,459,754 		JBrowse link
G Bbs7 Bardet-Biedl syndrome 7 IAGP MGI PMID:23572516 NCBI chr 3:36,627,291...36,667,639
Ensembl chr 3:36,627,291...36,667,626 		JBrowse link
G Cep164 centrosomal protein 164 IAGP MGI PMID:29244804 NCBI chr 9:45,678,244...45,739,984
Ensembl chr 9:45,678,244...45,739,989 		JBrowse link
G Cfap70 cilia and flagella associated protein 70 IAGP MGI PMID:37352829 NCBI chr14:20,444,258...20,502,332
Ensembl chr14:20,444,261...20,502,294 		JBrowse link
G Cwh43 cell wall biogenesis 43 C-terminal homolog IAGP MGI PMID:33459505 NCBI chr 5:73,563,394...73,610,778
Ensembl chr 5:73,563,418...73,610,778 		JBrowse link
G Jhy junctional cadherin complex regulator IAGP MGI PMID:23906841 NCBI chr 9:40,806,147...40,877,560
Ensembl chr 9:40,806,145...40,875,414 		JBrowse link
G Odf2 outer dense fiber of sperm tails 2 IAGP MGI PMID:22265411 NCBI chr 2:29,779,026...29,821,758
Ensembl chr 2:29,779,233...29,821,758 		JBrowse link
G Pfdn5 prefoldin 5 IAGP MGI PMID:20956523 NCBI chr15:102,234,551...102,239,925
Ensembl chr15:102,234,551...102,240,308 		JBrowse link
G Trip6 thyroid hormone receptor interactor 6 IAGP MGI PMID:34620853 NCBI chr 5:137,308,160...137,312,469
Ensembl chr 5:137,307,916...137,312,666 		JBrowse link
increased brain ependyma motile cilium length term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cep55 centrosomal protein 55 IAGP MGI PMID:33475699 NCBI chr19:38,043,423...38,062,873
Ensembl chr19:38,043,459...38,062,871 		JBrowse link
G Kif19a kinesin family member 19A IAGP MGI PMID:23168168 NCBI chr11:114,656,227...114,681,565
Ensembl chr11:114,656,214...114,681,565 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16965
    nervous system phenotype 4640
      abnormal nervous system morphology 3672
        abnormal ependyma morphology 59
          abnormal brain ependyma morphology 46
            abnormal brain ependyma motile cilium morphology 37
              abnormal brain ependyma motile cilium location or orientation 6
              decreased brain ependyma motile cilium length 6
              decreased brain ependyma motile cilium number + 16
              increased brain ependyma motile cilium length 2
Path 2
Term Annotations click to browse term
  mammalian phenotype 16965
    nervous system phenotype 4640
      abnormal nervous system morphology 3672
        abnormal brain morphology 2143
          abnormal brain ventricular system morphology 532
            abnormal brain ventricle morphology 413
              abnormal brain ependyma morphology 46
                abnormal brain ependyma motile cilium morphology 37
                  abnormal brain ependyma motile cilium location or orientation 6
                  decreased brain ependyma motile cilium length 6
                  decreased brain ependyma motile cilium number + 16
                  increased brain ependyma motile cilium length 2
paths to the root