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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal bronchiole epithelium morphology
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Accession:MP:0010897 term browser browse the term
Definition:any structural anomaly of the epithelial layer of the bronchioles



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abnormal bronchiole epithelium morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca3 ATP-binding cassette, sub-family A member 3 IAGP MGI PMID:17267394 NCBI chr17:24,570,997...24,629,178
Ensembl chr17:24,570,924...24,629,175
JBrowse link
G Adam17 a disintegrin and metallopeptidase domain 17 IAGP MGI PMID:9812885 NCBI chr12:21,373,510...21,423,633
Ensembl chr12:21,373,510...21,423,633
JBrowse link
G Egfr epidermal growth factor receptor IAGP MGI PMID:7618085 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158
JBrowse link
G Hoxa5 homeobox A5 IAGP MGI PMID:9441679 NCBI chr 6:52,178,768...52,181,437
Ensembl chr 6:52,178,734...52,181,567
JBrowse link
G Ifi27l2a interferon, alpha-inducible protein 27 like 2A IAGP MGI PMID:25184786 NCBI chr12:103,400,132...103,409,939
Ensembl chr12:103,408,426...103,409,939
JBrowse link
G Igf1r insulin-like growth factor I receptor IAGP MGI PMID:25238791 PMID:27861515 NCBI chr 7:67,601,486...67,883,416
Ensembl chr 7:67,602,575...67,883,416
JBrowse link
G Itga3 integrin alpha 3 IAGP MGI PMID:8951069 NCBI chr11:94,935,301...94,967,637
Ensembl chr11:94,935,300...94,967,627
JBrowse link
G Lox lysyl oxidase IAGP MGI PMID:16192629 NCBI chr18:52,649,132...52,662,939
Ensembl chr18:52,649,139...52,662,939
JBrowse link
G Ndor1 NADPH dependent diflavin oxidoreductase 1 IAGP MGI PMID:25238791 NCBI chr 2:25,134,825...25,145,458
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
JBrowse link
G Pofut1 protein O-fucosyltransferase 1 IAGP MGI PMID:19502490 NCBI chr 2:153,083,435...153,114,862
Ensembl chr 2:153,083,453...153,112,167
JBrowse link
G Pura purine rich element binding protein A IAGP MGI PMID:12972605 NCBI chr18:36,413,614...36,434,575
Ensembl chr18:36,414,150...36,425,588
JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:19502490 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 IAGP MGI PMID:20011520 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor I IAGP MGI PMID:20147383 NCBI chr 4:47,353,258...47,414,926
Ensembl chr 4:47,353,222...47,414,931
JBrowse link
abnormal club cell morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calca calcitonin/calcitonin-related polypeptide, alpha IAGP MGI PMID:23047698 NCBI chr 7:114,225,223...114,236,145
Ensembl chr 7:114,230,713...114,235,592
JBrowse link
G Cby1 chibby family member 1, beta catenin antagonist IAGP MGI PMID:21049041 NCBI chr15:79,543,437...79,551,861
Ensembl chr15:79,543,400...79,551,861
JBrowse link
G Crb3 crumbs family member 3 IAGP MGI PMID:24164893 NCBI chr17:57,368,583...57,372,920
Ensembl chr17:57,366,105...57,372,918
JBrowse link
G Crh corticotropin releasing hormone IAGP MGI PMID:9922208 NCBI chr 3:19,747,565...19,749,560
Ensembl chr 3:19,747,565...19,749,560
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:23047698 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Hikeshi heat shock protein nuclear import factor IAGP MGI PMID:16157679 NCBI chr 7:89,567,893...89,590,446
Ensembl chr 7:89,566,737...89,590,412
JBrowse link
G Keap1 kelch-like ECH-associated protein 1 IAGP MGI PMID:19520915 NCBI chr 9:21,141,026...21,150,628
Ensembl chr 9:21,141,026...21,150,657
JBrowse link
G Mmp14 matrix metallopeptidase 14 (membrane-inserted) IAGP MGI PMID:15739229 NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821
JBrowse link
G Rab27a RAB27A, member RAS oncogene family IAGP MGI PMID:21160031 NCBI chr 9:72,952,092...73,004,905
Ensembl chr 9:72,952,136...73,004,911
JBrowse link
G Rab27b RAB27B, member RAS oncogene family IAGP MGI PMID:21160031 NCBI chr18:70,112,202...70,274,704
Ensembl chr18:70,112,202...70,274,676
JBrowse link
absent club cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pofut1 protein O-fucosyltransferase 1 IAGP MGI PMID:19502490 NCBI chr 2:153,083,435...153,114,862
Ensembl chr 2:153,083,453...153,112,167
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region IAGP MGI PMID:19502490 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704
JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:19502490 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 IAGP MGI PMID:20011520 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610
JBrowse link
G Wfdc2 WAP four-disulfide core domain 2 IAGP MGI PMID:31562139 NCBI chr 2:164,404,635...164,410,430
Ensembl chr 2:164,404,333...164,410,430
JBrowse link
bronchiolar epithelial hyperplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Errfi1 ERBB receptor feedback inhibitor 1 IAGP MGI PMID:19710174 NCBI chr 4:150,938,253...150,953,346
Ensembl chr 4:150,938,376...150,953,349
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:20548776 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog IAGP MGI PMID:19151761 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965
JBrowse link
G Pten phosphatase and tensin homolog IAGP MGI PMID:17909629 PMID:17921358 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560
JBrowse link
decreased club cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp1 forkhead box P1 IAGP MGI PMID:22675208 NCBI chr 6:98,902,303...99,510,587
Ensembl chr 6:98,902,299...99,499,682
JBrowse link
G Foxp4 forkhead box P4 IAGP MGI PMID:22675208 NCBI chr17:48,178,058...48,235,401
Ensembl chr17:48,178,058...48,235,570
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IAGP MGI PMID:10952889 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614
JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:22675208 PMID:26329601 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor I IAGP MGI PMID:20147383 NCBI chr 4:47,353,258...47,414,926
Ensembl chr 4:47,353,222...47,414,931
JBrowse link
G Yy1 YY1 transcription factor IAGP MGI PMID:26329601 NCBI chr12:108,758,841...108,786,074
Ensembl chr12:108,758,899...108,786,074
JBrowse link
increased club cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lipa lysosomal acid lipase A IAGP MGI PMID:14644759 NCBI chr19:34,469,716...34,504,874
Ensembl chr19:34,469,718...34,504,874
JBrowse link
G Pten phosphatase and tensin homolog IAGP MGI PMID:17921358 PMID:19574443 PMID:20147383 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560
JBrowse link
G Thbs1 thrombospondin 1 IAGP MGI PMID:9657149 NCBI chr 2:117,942,357...117,957,614
Ensembl chr 2:117,942,357...117,957,614
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16734
    respiratory system phenotype 1842
      abnormal respiratory system morphology 1272
        abnormal lung morphology 829
          abnormal lung epithelium morphology 163
            abnormal bronchiole epithelium morphology 35
              abnormal club cell morphology + 23
              bronchiolar epithelial hyperplasia 4
Path 2
Term Annotations click to browse term
  mammalian phenotype 16734
    respiratory system phenotype 1842
      abnormal respiratory system morphology 1272
        abnormal lung morphology 829
          abnormal respiratory conducting tube morphology 111
            abnormal bronchiole morphology 58
              abnormal bronchiole epithelium morphology 35
                abnormal club cell morphology + 23
                bronchiolar epithelial hyperplasia 4
paths to the root