Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:absent alveolar lamellar bodies
go back to main search page
Accession:MP:0010814 term browser browse the term
Definition:absence of the specialized secretory organelles found in the cytoplasm of type II pneumocytes and involved in the synthesis, secretion, and reutilization of pulmonary surfactant


show annotations for term's descendants           Sort by:
absent alveolar lamellar bodies term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca12 ATP-binding cassette, sub-family A member 12 IAGP MGI PMID:18632686 NCBI chr 1:71,282,249...71,454,069
Ensembl chr 1:71,281,435...71,454,069 		JBrowse link
G Abca3 ATP-binding cassette, sub-family A member 3 IAGP MGI PMID:17142808 PMID:17267394 PMID:17540762 NCBI chr17:24,570,997...24,629,178
Ensembl chr17:24,570,924...24,629,175 		JBrowse link
G Cebpa CCAAT/enhancer binding protein alpha IAGP MGI PMID:16428462 NCBI chr 7:34,818,718...34,821,353
Ensembl chr 7:34,818,718...34,821,353 		JBrowse link
G Cited2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 IAGP MGI PMID:18358466 NCBI chr10:17,598,452...17,601,422
Ensembl chr10:17,598,966...17,601,422 		JBrowse link
G Foxa2 forkhead box A2 IAGP MGI PMID:15452354 NCBI chr 2:147,884,797...147,888,889
Ensembl chr 2:147,884,797...147,888,889 		JBrowse link
G Gata6 GATA binding protein 6 IAGP MGI PMID:17164424 NCBI chr18:11,052,510...11,085,636
Ensembl chr18:11,052,064...11,085,635 		JBrowse link
G Hsd11b1 hydroxysteroid 11-beta dehydrogenase 1 IAGP MGI PMID:12439781 NCBI chr 1:192,903,917...192,946,345
Ensembl chr 1:192,903,942...192,946,383 		JBrowse link
G Klf5 Kruppel-like transcription factor 5 IAGP MGI PMID:18599506 NCBI chr14:99,536,127...99,550,848
Ensembl chr14:99,536,127...99,552,472 		JBrowse link
G Nkx2-1 NK2 homeobox 1 IAGP MGI PMID:17164424 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693 		JBrowse link
G Nos3 nitric oxide synthase 3, endothelial cell IAGP MGI PMID:15016731 NCBI chr 5:24,569,772...24,589,472
Ensembl chr 5:24,569,808...24,589,472 		JBrowse link
G Sftpb surfactant associated protein B IAGP MGI PMID:7644495 NCBI chr 6:72,281,594...72,291,354
Ensembl chr 6:72,281,594...72,291,354 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 17065
    respiratory system phenotype 1888
      abnormal respiratory system morphology 1302
        abnormal lung morphology 973
          abnormal lung epithelium morphology 161
            abnormal pulmonary alveolus epithelium morphology 100
              abnormal pulmonary alveolus epithelial cell morphology 96
                abnormal type II pneumocyte morphology 82
                  abnormal alveolar lamellar body morphology 47
                    absent alveolar lamellar bodies 11
Path 2
Term Annotations click to browse term
  mammalian phenotype 17065
    respiratory system phenotype 1888
      abnormal respiratory system morphology 1302
        abnormal lung morphology 973
          abnormal pulmonary alveolar system morphology 379
            abnormal pulmonary acinus morphology 365
              abnormal pulmonary alveolus morphology 326
                abnormal pulmonary alveolus epithelium morphology 100
                  abnormal pulmonary alveolus epithelial cell morphology 96
                    abnormal type II pneumocyte morphology 82
                      abnormal alveolar lamellar body morphology 47
                        absent alveolar lamellar bodies 11
paths to the root