Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal skeletal muscle fiber type ratio
go back to main search page
Accession:MP:0009409 term browser browse the term
Definition:deviation from the standard ratios of fiber types in a given skeletal muscle compared to control samples
Synonyms:exact_synonym: abnormal skeletal muscle fiber distribution;   abnormal skeletal muscle fibre distribution;   abnormal skeletal muscle fibre type ratio


show annotations for term's descendants           Sort by:
abnormal skeletal muscle fiber type ratio term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adipor1 adiponectin receptor 1 IAGP MGI PMID:20357764 NCBI chr 1:134,343,116...134,361,089
Ensembl chr 1:134,343,116...134,361,089 		JBrowse link
G Agrn agrin IAGP MGI PMID:21890498 NCBI chr 4:156,249,747...156,281,997
Ensembl chr 4:156,249,747...156,281,945 		JBrowse link
G Als2 alsin Rho guanine nucleotide exchange factor IAGP MGI PMID:16321985 NCBI chr 1:59,201,915...59,276,390
Ensembl chr 1:59,202,085...59,276,390 		JBrowse link
G Apobec2 apolipoprotein B mRNA editing enzyme, catalytic polypeptide 2 IAGP MGI PMID:20022958 NCBI chr17:48,726,259...48,739,756
Ensembl chr17:48,726,259...48,739,958 		JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 IAGP MGI PMID:11146504 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004 		JBrowse link
G Cacna1s calcium channel, voltage-dependent, L type, alpha 1S subunit IAGP MGI PMID:26965373 NCBI chr 1:135,980,549...136,047,268
Ensembl chr 1:135,980,488...136,047,560 		JBrowse link
G Cfl2 cofilin 2, muscle IAGP MGI PMID:22343409 NCBI chr12:54,905,602...54,910,065
Ensembl chr12:54,905,594...54,909,662 		JBrowse link
G Cisd2 CDGSH iron sulfur domain 2 IAGP MGI PMID:22343142 NCBI chr 3:135,112,173...135,129,194
Ensembl chr 3:135,112,173...135,129,686 		JBrowse link
G Col13a1 collagen, type XIII, alpha 1 IAGP MGI PMID:28369367 NCBI chr10:61,674,013...61,814,985
Ensembl chr10:61,674,015...61,814,887 		JBrowse link
G Dmd dystrophin, muscular dystrophy IAGP MGI PMID:28592916 NCBI chr  X:81,858,244...84,248,656
Ensembl chr  X:81,992,476...84,249,747 		JBrowse link
G Dnm2 dynamin 2 IAGP MGI PMID:32129442 NCBI chr 9:21,336,167...21,419,055
Ensembl chr 9:21,336,204...21,419,055 		JBrowse link
G Elavl1 ELAV like RNA binding protein 1 IAGP MGI PMID:31519904 NCBI chr 8:4,334,781...4,375,104
Ensembl chr 8:4,335,382...4,375,413 		JBrowse link
G Fkbp1a FK506 binding protein 1a IAGP MGI PMID:15289441 NCBI chr 2:151,384,403...151,403,611
Ensembl chr 2:151,384,403...151,403,612 		JBrowse link
G Fkrp fukutin related protein IAGP MGI PMID:26574668 NCBI chr 7:16,543,192...16,550,657
Ensembl chr 7:16,543,171...16,550,657 		JBrowse link
G Foxj3 forkhead box J3 IAGP MGI PMID:19914232 NCBI chr 4:119,396,858...119,486,316
Ensembl chr 4:119,394,201...119,486,316 		JBrowse link
G Gas7 growth arrest specific 7 IAGP MGI PMID:22662195 NCBI chr11:67,344,083...67,579,818
Ensembl chr11:67,345,917...67,575,800 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:27907123 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294 		JBrowse link
G Hba-a1 hemoglobin alpha, adult chain 1 IAGP MGI PMID:12458204 NCBI chr11:32,233,672...32,234,486
Ensembl chr11:32,233,511...32,234,465 		JBrowse link
G Hdac4 histone deacetylase 4 IAGP MGI PMID:17786239 NCBI chr 1:91,856,501...92,123,424
Ensembl chr 1:91,856,501...92,123,421 		JBrowse link
G Hdac5 histone deacetylase 5 IAGP MGI PMID:17786239 NCBI chr11:102,085,244...102,120,968
Ensembl chr11:102,085,258...102,120,992 		JBrowse link
G Hdac9 histone deacetylase 9 IAGP MGI PMID:17786239 NCBI chr12:34,097,579...34,967,094
Ensembl chr12:34,097,579...34,967,094 		JBrowse link
G Hspg2 perlecan (heparan sulfate proteoglycan 2) IAGP MGI PMID:18647752 NCBI chr 4:137,196,062...137,297,941
Ensembl chr 4:137,196,080...137,297,941 		JBrowse link
G Itga7 integrin alpha 7 IAGP MGI PMID:22798625 NCBI chr10:128,769,633...128,794,155
Ensembl chr10:128,769,645...128,794,155 		JBrowse link
G Lep leptin IAGP MGI PMID:19528970 NCBI chr 6:29,060,220...29,073,875
Ensembl chr 6:29,060,219...29,073,876 		JBrowse link
G Mef2c myocyte enhancer factor 2C IAGP MGI PMID:17786239 NCBI chr13:83,652,136...83,815,197
Ensembl chr13:83,652,153...83,815,199 		JBrowse link
G Mef2d myocyte enhancer factor 2D IAGP MGI PMID:17786239 NCBI chr 3:88,049,248...88,079,398
Ensembl chr 3:88,049,679...88,079,393 		JBrowse link
G Mir208b microRNA 208b IAGP MGI PMID:19922871 NCBI chr14:55,213,157...55,213,233
Ensembl chr14:55,213,157...55,213,233 		JBrowse link
G Mir499 microRNA 499 IAGP MGI PMID:19922871 NCBI chr 2:155,464,800...155,464,878
Ensembl chr 2:155,464,800...155,464,878 		JBrowse link
G Myf5 myogenic factor 5 IAGP MGI PMID:29168801 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995 		JBrowse link
G Myh1 myosin, heavy polypeptide 1, skeletal muscle, adult IAGP MGI PMID:9585413 NCBI chr11:67,090,922...67,115,401
Ensembl chr11:67,090,878...67,115,401 		JBrowse link
G Myh3 myosin, heavy polypeptide 3, skeletal muscle, embryonic IAGP MGI PMID:32094117 NCBI chr11:66,969,101...66,993,117
Ensembl chr11:66,969,126...66,993,112 		JBrowse link
G Myh4 myosin, heavy polypeptide 4, skeletal muscle IAGP MGI PMID:11171584 NCBI chr11:67,128,638...67,151,273
Ensembl chr11:67,128,855...67,151,272 		JBrowse link
G Myoz1 myozenin 1 IAGP MGI PMID:18846255 NCBI chr14:20,699,170...20,706,608
Ensembl chr14:20,699,175...20,706,608 		JBrowse link
G Myoz2 myozenin 2 IAGP MGI PMID:15543153 NCBI chr 3:122,799,855...122,828,649
Ensembl chr 3:122,799,855...122,828,664 		JBrowse link
G Neb nebulin IAGP MGI PMID:26123491 PMID:32066503 NCBI chr 2:52,026,652...52,228,810
Ensembl chr 2:52,026,659...52,268,486 		JBrowse link
G Nr1d1 nuclear receptor subfamily 1, group D, member 1 IAGP MGI PMID:15374821 NCBI chr11:98,658,758...98,666,233
Ensembl chr11:98,658,758...98,666,159 		JBrowse link
G Ostn osteocrin IAGP MGI PMID:26668395 NCBI chr16:27,125,733...27,169,959
Ensembl chr16:27,126,239...27,169,962 		JBrowse link
G Ppp3ca protein phosphatase 3, catalytic subunit, alpha isoform IAGP MGI PMID:12773574 NCBI chr 3:136,375,778...136,643,488
Ensembl chr 3:136,375,885...136,643,488 		JBrowse link
G Ppp3cb protein phosphatase 3, catalytic subunit, beta isoform IAGP MGI PMID:12773574 NCBI chr14:20,549,432...20,596,641
Ensembl chr14:20,549,432...20,596,641 		JBrowse link
G Scyl1 SCY1-like 1 (S. cerevisiae) IAGP MGI PMID:23175812 NCBI chr19:5,808,450...5,821,461
Ensembl chr19:5,808,379...5,821,447 		JBrowse link
G Selenon selenoprotein N IAGP MGI PMID:21858002 NCBI chr 4:134,265,203...134,279,477
Ensembl chr 4:134,265,203...134,279,477 		JBrowse link
G Selenos selenoprotein S IAGP MGI PMID:28592916 NCBI chr 7:65,729,397...65,739,153
Ensembl chr 7:65,729,397...65,739,153 		JBrowse link
G Slc2a4 solute carrier family 2 (facilitated glucose transporter), member 4 IAGP MGI PMID:11788366 NCBI chr11:69,833,112...69,839,040
Ensembl chr11:69,833,365...69,839,014 		JBrowse link
G Smtnl1 smoothelin-like 1 IAGP MGI PMID:18310078 NCBI chr 2:84,641,494...84,657,173
Ensembl chr 2:84,641,520...84,652,996 		JBrowse link
G Spin1 spindlin 1 IAGP MGI PMID:29168801 NCBI chr13:51,254,523...51,306,588
Ensembl chr13:51,254,916...51,306,582 		JBrowse link
G Sspn sarcospan IAGP MGI PMID:22798625 NCBI chr 6:145,860,423...145,910,951
Ensembl chr 6:145,877,367...145,910,949 		JBrowse link
G Stub1 STIP1 homology and U-Box containing protein 1 IAGP MGI PMID:28593200 NCBI chr17:26,049,608...26,051,893
Ensembl chr17:26,049,479...26,052,378 		JBrowse link
G Synm synemin, intermediate filament protein IAGP MGI PMID:25179606 NCBI chr 7:67,379,909...67,409,490
Ensembl chr 7:67,379,908...67,409,490 		JBrowse link
G Tnnt1 troponin T1, skeletal, slow IAGP MGI PMID:24445317 NCBI chr 7:4,507,568...4,518,974
Ensembl chr 7:4,507,569...4,519,381 		JBrowse link
G Trim32 tripartite motif-containing 32 IAGP MGI PMID:19155210 NCBI chr 4:65,523,223...65,534,477
Ensembl chr 4:65,523,223...65,534,475 		JBrowse link
G Vgll2 vestigial like family member 2 IAGP MGI PMID:28769032 NCBI chr10:51,898,598...51,904,567
Ensembl chr10:51,898,598...51,904,567 		JBrowse link
G Wfikkn1 WAP, FS, Ig, KU, and NTR-containing protein 1 IAGP MGI PMID:24019467 NCBI chr17:26,096,602...26,099,832
Ensembl chr17:26,096,602...26,099,832 		JBrowse link
G Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 IAGP MGI PMID:24019467 NCBI chr11:94,126,777...94,138,613
Ensembl chr11:94,126,782...94,136,831 		JBrowse link
G Zfp106 zinc finger protein 106 IAGP MGI PMID:26604141 NCBI chr 2:120,337,303...120,394,345
Ensembl chr 2:120,337,301...120,394,324 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16965
    muscle phenotype 1976
      abnormal muscle morphology 1458
        abnormal skeletal muscle morphology 658
          abnormal skeletal muscle fiber type ratio 54
paths to the root