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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:decreased trabecular bone thickness
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Accession:MP:0009346 term browser browse the term
Definition:thinner than normal bone with a lattice-like or spongy structure
Synonyms:exact_synonym: decreased cancellous bone thickness;   decreased spongy bone thickness;   decreased spongy spongiosa thickness;   decreased spongy substance thickness;   decreased substantia trabecularis thickness;   reduced cancellous bone thickness;   reduced spongy bone thickness;   reduced spongy spongiosa thickness;   reduced spongy substance thickness;   reduced substantia trabecularis thickness



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decreased trabecular bone thickness term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 a disintegrin and metallopeptidase domain 17 IAGP MGI PMID:19201862 NCBI chr12:21,373,510...21,423,633
Ensembl chr12:21,373,510...21,423,633
JBrowse link
G Akr1a1 aldo-keto reductase family 1, member A1 IAGP MGI PMID:20410296 NCBI chr 4:116,493,707...116,508,871
Ensembl chr 4:116,493,707...116,508,877
JBrowse link
G Alpl alkaline phosphatase, liver/bone/kidney IAGP MGI PMID:25716980 NCBI chr 4:137,469,042...137,523,695
Ensembl chr 4:137,469,044...137,523,695
JBrowse link
G Ano5 anoctamin 5 IAGP MGI PMID:30712070 PMID:34841576 NCBI chr 7:51,160,668...51,248,459
Ensembl chr 7:51,160,777...51,248,457
JBrowse link
G Apoe apolipoprotein E IAGP MGI PMID:17259598 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Atp6v1h ATPase, H+ transporting, lysosomal V1 subunit H IAGP MGI PMID:27924156 NCBI chr 1:5,153,201...5,233,438
Ensembl chr 1:5,140,241...5,232,752
JBrowse link
G Bmp2 bone morphogenetic protein 2 IAGP MGI PMID:23843612 NCBI chr 2:133,394,079...133,404,816
Ensembl chr 2:133,394,079...133,404,805
JBrowse link
G Casp3 caspase 3 IAGP MGI PMID:15599395 NCBI chr 8:47,070,326...47,092,733
Ensembl chr 8:47,070,326...47,092,724
JBrowse link
G Casr calcium-sensing receptor IAGP MGI PMID:18765830 NCBI chr16:36,310,947...36,382,605
Ensembl chr16:36,314,058...36,382,503
JBrowse link
G Ccn2 cellular communication network factor 2 IAGP MGI PMID:12736220 NCBI chr10:24,471,340...24,474,581
Ensembl chr10:24,471,340...24,474,581
JBrowse link
G Cebpb CCAAT/enhancer binding protein beta IAGP MGI PMID:19440205 NCBI chr 2:167,530,835...167,532,352
Ensembl chr 2:167,530,835...167,532,338
JBrowse link
G Chd7 chromodomain helicase DNA binding protein 7 IAGP MGI PMID:35418650 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659
JBrowse link
G Chsy1 chondroitin sulfate synthase 1 IEA MGI NCBI chr 7:65,759,240...65,823,546
Ensembl chr 7:65,759,263...65,823,546
JBrowse link
G Cisd2 CDGSH iron sulfur domain 2 IAGP MGI PMID:19451219 NCBI chr 3:135,112,173...135,129,194
Ensembl chr 3:135,112,173...135,129,686
JBrowse link
G Cldn18 claudin 18 IAGP MGI PMID:23299504 NCBI chr 9:99,572,849...99,599,320
Ensembl chr 9:99,571,514...99,599,320
JBrowse link
G Clec11a C-type lectin domain family 11, member a IAGP MGI PMID:27976999 NCBI chr 7:43,953,190...43,956,383
Ensembl chr 7:43,952,111...43,956,326
JBrowse link
G Clec2d C-type lectin domain family 2, member d IAGP MGI PMID:18782774 NCBI chr 6:129,157,578...129,163,498
Ensembl chr 6:129,157,578...129,163,497
JBrowse link
G Cnot3 CCR4-NOT transcription complex, subunit 3 IAGP MGI PMID:24550297 NCBI chr 7:3,646,717...3,664,108
Ensembl chr 7:3,648,267...3,664,108
JBrowse link
G Creb3l1 cAMP responsive element binding protein 3-like 1 IAGP MGI PMID:19767743 NCBI chr 2:91,812,673...91,854,515
Ensembl chr 2:91,812,673...91,854,847
JBrowse link
G Csf1 colony stimulating factor 1 (macrophage) IAGP MGI PMID:21958845 NCBI chr 3:107,648,364...107,668,048
Ensembl chr 3:107,648,364...107,667,785
JBrowse link
G Cthrc1 collagen triple helix repeat containing 1 IAGP MGI PMID:23908115 NCBI chr15:38,940,327...38,950,516
Ensembl chr15:38,940,327...38,950,516
JBrowse link
G Ctnnb1 catenin beta 1 IAGP MGI PMID:21876000 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Ctsk cathepsin K IAGP MGI PMID:23908115 NCBI chr 3:95,406,521...95,416,698
Ensembl chr 3:95,406,567...95,416,673
JBrowse link
G Dpp3 dipeptidylpeptidase 3 IAGP MGI PMID:31295380 NCBI chr19:4,957,257...4,978,315
Ensembl chr19:4,957,257...4,978,315
JBrowse link
G Fam20c FAM20C, golgi associated secretory pathway kinase IAGP MGI PMID:22732358 NCBI chr 5:138,740,836...138,795,818
Ensembl chr 5:138,740,269...138,795,832
JBrowse link
G Fas Fas cell surface death receptor IAGP MGI PMID:17259598 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172
JBrowse link
G Fbn1 fibrillin 1 IAGP MGI PMID:22374917 NCBI chr 2:125,142,514...125,348,417
Ensembl chr 2:125,142,514...125,349,913
JBrowse link
G Fgfr3 fibroblast growth factor receptor 3 IAGP MGI PMID:28230213 PMID:37345656 NCBI chr 5:33,879,068...33,894,412
Ensembl chr 5:33,879,018...33,894,412
JBrowse link
G Fosl2 fos-like antigen 2 IAGP MGI PMID:24046454 NCBI chr 5:32,292,599...32,315,184
Ensembl chr 5:32,293,145...32,315,186
JBrowse link
G Gas5 growth arrest specific 5 IAGP MGI PMID:33006314 NCBI chr 1:160,862,171...160,866,109
Ensembl chr 1:160,861,992...160,866,116
JBrowse link
G Hfe homeostatic iron regulator IAGP MGI PMID:20976594 NCBI chr13:23,886,017...23,894,837
Ensembl chr13:23,886,017...23,894,837
JBrowse link
G Hgs HGF-regulated tyrosine kinase substrate IAGP MGI PMID:6024256 NCBI chr11:120,358,431...120,374,810
Ensembl chr11:120,358,461...120,374,805
JBrowse link
G Ibsp integrin binding sialoprotein IAGP MGI PMID:18458111 NCBI chr 5:104,447,153...104,459,338
Ensembl chr 5:104,447,037...104,459,335
JBrowse link
G Id1 inhibitor of DNA binding 1, HLH protein IAGP MGI PMID:19956687 NCBI chr 2:152,578,171...152,579,330
Ensembl chr 2:152,578,171...152,579,330
JBrowse link
G Idh2 isocitrate dehydrogenase 2 (NADP+), mitochondrial IAGP MGI PMID:29527922 NCBI chr 7:79,744,594...79,768,356
Ensembl chr 7:79,744,594...79,765,140
JBrowse link
G Ifngr1 interferon gamma receptor 1 IAGP MGI PMID:21308779 NCBI chr10:19,467,697...19,485,977
Ensembl chr10:19,467,697...19,485,977
JBrowse link
G Igf1r insulin-like growth factor I receptor IAGP MGI PMID:12215457 NCBI chr 7:67,601,486...67,883,416
Ensembl chr 7:67,602,575...67,883,416
JBrowse link
G Ighm immunoglobulin heavy constant mu IAGP MGI PMID:17202317 NCBI chr12:113,382,446...113,386,350
Ensembl chr12:113,382,178...113,386,350
JBrowse link
G Il10 interleukin 10 IAGP MGI PMID:15362035 NCBI chr 1:130,947,459...130,952,707
Ensembl chr 1:130,947,582...130,952,711
JBrowse link
G Il6st interleukin 6 signal transducer IAGP MGI PMID:14755335 NCBI chr13:112,600,604...112,643,394
Ensembl chr13:112,600,604...112,646,620
JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D IAGP MGI PMID:12161749 NCBI chr 1:87,548,034...87,648,232
Ensembl chr 1:87,548,034...87,648,229
JBrowse link
G Irs1 insulin receptor substrate 1 IAGP MGI PMID:20032200 NCBI chr 1:82,210,826...82,269,160
Ensembl chr 1:82,210,822...82,269,137
JBrowse link
G Itln1 intelectin 1 (galactofuranose binding) IAGP MGI PMID:29619269 NCBI chr 1:171,345,691...171,362,893
Ensembl chr 1:171,345,690...171,362,862
JBrowse link
G Lmna lamin A IAGP MGI PMID:32128409 NCBI chr 3:88,388,455...88,413,842
Ensembl chr 3:88,387,454...88,417,263
JBrowse link
G Mecom MDS1 and EVI1 complex locus IAGP MGI PMID:24316420 NCBI chr 3:30,005,445...30,563,937
Ensembl chr 3:30,005,445...30,602,157
JBrowse link
G Mfap2 microfibrillar-associated protein 2 IAGP MGI PMID:23963447 NCBI chr 4:140,737,735...140,743,284
Ensembl chr 4:140,737,729...140,743,295
JBrowse link
G Mfap5 microfibrillar associated protein 5 IAGP MGI PMID:23963447 NCBI chr 6:122,490,543...122,506,249
Ensembl chr 6:122,482,804...122,506,249
JBrowse link
G Mgp matrix Gla protein IAGP MGI PMID:23994172 NCBI chr 6:136,849,433...136,852,821
Ensembl chr 6:136,849,433...136,852,821
JBrowse link
G Naca nascent polypeptide-associated complex alpha polypeptide IAGP MGI PMID:19884350 NCBI chr10:127,869,144...127,884,506
Ensembl chr10:127,871,444...127,884,506
JBrowse link
G Nfix nuclear factor I/X IAGP MGI PMID:17353270 NCBI chr 8:85,431,341...85,527,086
Ensembl chr 8:85,426,505...85,526,973
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 IAGP MGI PMID:22558291 NCBI chr11:59,432,395...59,457,781
Ensembl chr11:59,432,394...59,457,782
JBrowse link
G Notch2 notch 2 IAGP MGI PMID:26627824 PMID:28592489 PMID:28856714 NCBI chr 3:97,920,854...98,057,683
Ensembl chr 3:97,920,843...98,057,677
JBrowse link
G Nppc natriuretic peptide type C IAGP MGI PMID:22271248 NCBI chr 1:86,594,015...86,598,295
Ensembl chr 1:86,594,013...86,598,293
JBrowse link
G P3h1 prolyl 3-hydroxylase 1 IAGP MGI PMID:24465224 NCBI chr 4:119,090,112...119,106,174
Ensembl chr 4:119,090,112...119,106,172
JBrowse link
G Pparg peroxisome proliferator activated receptor gamma IAGP MGI PMID:21876000 NCBI chr 6:115,337,828...115,467,365
Ensembl chr 6:115,337,912...115,467,360
JBrowse link
G Ppib peptidylprolyl isomerase B IAGP MGI PMID:24968150 NCBI chr 9:65,967,451...65,973,911
Ensembl chr 9:65,967,504...65,973,905
JBrowse link
G Prkaca protein kinase, cAMP dependent, catalytic, alpha IAGP MGI PMID:20421483 NCBI chr 8:84,699,607...84,723,073
Ensembl chr 8:84,699,622...84,723,072
JBrowse link
G Rassf2 Ras association (RalGDS/AF-6) domain family member 2 IAGP MGI PMID:22227519 NCBI chr 2:131,834,770...131,872,336
Ensembl chr 2:131,831,335...131,872,178
JBrowse link
G Runx2 runt related transcription factor 2 IAGP MGI PMID:25244033 NCBI chr17:44,806,873...45,125,518
Ensembl chr17:44,806,874...45,125,684
JBrowse link
G Runx3 runt related transcription factor 3 IAGP MGI PMID:25605327 NCBI chr 4:134,847,956...134,905,301
Ensembl chr 4:134,847,963...134,905,301
JBrowse link
G Scube2 signal peptide, CUB domain, EGF-like 2 IAGP MGI PMID:25639508 NCBI chr 7:109,397,897...109,464,886
Ensembl chr 7:109,397,883...109,464,886
JBrowse link
G Slc10a7 solute carrier family 10 (sodium/bile acid cotransporter family), member 7 IAGP MGI PMID:30082715 NCBI chr 8:79,235,957...79,460,641
Ensembl chr 8:79,235,975...79,460,632
JBrowse link
G Smad1 SMAD family member 1 IAGP MGI PMID:21420501 NCBI chr 8:80,065,024...80,126,057
Ensembl chr 8:80,065,024...80,126,147
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 IAGP MGI PMID:19201862 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
G Spop speckle-type BTB/POZ protein IAGP MGI PMID:27930311 NCBI chr11:95,304,909...95,384,236
Ensembl chr11:95,304,906...95,384,232
JBrowse link
G Stat3 signal transducer and activator of transcription 3 IAGP MGI PMID:16679075 NCBI chr11:100,777,632...100,830,447
Ensembl chr11:100,775,924...100,830,366
JBrowse link
G Suco SUN domain containing ossification factor IAGP MGI PMID:20440000 NCBI chr 1:161,643,681...161,704,506
Ensembl chr 1:161,643,683...161,704,251
JBrowse link
G Terc telomerase RNA component IAGP MGI PMID:24626990 NCBI chr 3:96,321,753...96,322,149
Ensembl chr 3:96,321,753...96,322,149
JBrowse link
G Thra thyroid hormone receptor alpha IAGP MGI PMID:29205102 NCBI chr11:98,631,539...98,659,832
Ensembl chr11:98,631,464...98,659,832
JBrowse link
G Thrb thyroid hormone receptor beta IAGP MGI PMID:17327419 NCBI chr14:4,429,599...4,810,538
Ensembl chr14:4,431,611...4,809,435
JBrowse link
G Tmem178 transmembrane protein 178 IAGP MGI PMID:26644563 NCBI chr17:81,252,061...81,309,245
Ensembl chr17:81,252,061...81,309,245
JBrowse link
G Tmem263 transmembrane protein 263 IAGP MGI PMID:38241182 NCBI chr10:84,938,491...84,953,611
Ensembl chr10:84,938,491...84,956,482
JBrowse link
G Trpv5 transient receptor potential cation channel, subfamily V, member 5 IAGP MGI PMID:14679186 PMID:23383183 NCBI chr 6:41,628,595...41,658,158
Ensembl chr 6:41,629,107...41,657,703
JBrowse link
G Usp34 ubiquitin specific peptidase 34 IAGP MGI PMID:30181118 NCBI chr11:23,256,433...23,440,560
Ensembl chr11:23,256,895...23,440,560
JBrowse link
G Wrn Werner syndrome RecQ like helicase IAGP MGI PMID:24626990 NCBI chr 8:33,724,400...33,875,591
Ensembl chr 8:33,724,412...33,875,555
JBrowse link
G Wwox WW domain-containing oxidoreductase IAGP MGI PMID:19936220 NCBI chr 8:115,166,377...116,079,451
Ensembl chr 8:115,166,395...116,079,447
JBrowse link
G Zfp467 zinc finger protein 467 IAGP MGI PMID:33359894 NCBI chr 6:48,404,626...48,422,926
Ensembl chr 6:48,404,631...48,422,759
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16725
    skeleton phenotype 3344
      abnormal skeleton morphology 3156
        abnormal bone structure 1497
          abnormal trabecular bone morphology 351
            abnormal trabecular bone thickness 134
              decreased trabecular bone thickness 77
paths to the root