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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:decreased mature gamma-delta T cell number
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Accession:MP:0008354 term browser browse the term
Definition:reduced number of a mature T cell expressing an gamma-delta T cell receptor complex
Comment:Note that gamma-delta T cell have both thymic and extrathymic differentiation pathways.
Synonyms:exact_synonym: decreased mature gamma-delta T lymphocyte number;   reduced mature gamma-delta T-cell number;   reduced mature gamma-delta T-lymphocyte number



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decreased mature gamma-delta T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikzf1 IKAROS family zinc finger 1 IAGP MGI PMID:8986714 NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926
JBrowse link
G Nckap1l NCK associated protein 1 like IAGP MGI PMID:19015308 NCBI chr15:103,362,219...103,411,288
Ensembl chr15:103,362,221...103,407,237
JBrowse link
absent gamma-delta intraepithelial T cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd247 CD247 antigen IAGP MGI PMID:9529325 NCBI chr 1:165,607,514...165,698,722
Ensembl chr 1:165,616,250...165,704,846
JBrowse link
G Fcer1g Fc receptor, IgE, high affinity I, gamma polypeptide IAGP MGI PMID:9529325 NCBI chr 1:171,057,141...171,061,918
Ensembl chr 1:171,057,141...171,061,934
JBrowse link
G Il2rg interleukin 2 receptor, gamma chain IAGP MGI PMID:7697543 PMID:9334367 NCBI chr  X:100,307,991...100,311,861
Ensembl chr  X:100,307,984...100,311,861
JBrowse link
absent mature gamma-delta T cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il7r interleukin 7 receptor IAGP MGI PMID:8692964 NCBI chr15:9,505,880...9,530,270
Ensembl chr15:9,505,874...9,530,262
JBrowse link
G Lat linker for activation of T cells IAGP MGI PMID:12970761 NCBI chr 7:125,962,999...125,968,877
Ensembl chr 7:125,962,996...125,968,742
JBrowse link
decreased CD4-positive, gamma-delta intraepithelial T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btnl6 butyrophilin-like 6 IAGP MGI PMID:32724083 NCBI chr17:34,726,844...34,737,750
Ensembl chr17:34,726,778...34,736,326
JBrowse link
decreased CD8-positive, gamma-delta intraepithelial T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr9 C-C motif chemokine receptor 9 IAGP MGI PMID:11884450 NCBI chr 9:123,596,276...123,612,522
Ensembl chr 9:123,507,504...123,613,395
JBrowse link
G Gpr18 G protein-coupled receptor 18 IAGP MGI PMID:25348153 NCBI chr14:122,148,846...122,153,300
Ensembl chr14:122,148,665...122,153,193
JBrowse link
G Il15 interleukin 15 IAGP MGI PMID:19913445 NCBI chr 8:83,058,253...83,129,883
Ensembl chr 8:83,058,261...83,129,851
JBrowse link
G Il15ra interleukin 15 receptor, alpha chain IAGP MGI PMID:19913445 NCBI chr 2:11,709,992...11,739,129
Ensembl chr 2:11,710,101...11,739,128
JBrowse link
decreased gamma-delta intraepithelial T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP-binding cassette, sub-family B member 1A IAGP MGI PMID:10906391 NCBI chr 5:8,617,091...8,798,575
Ensembl chr 5:8,710,077...8,798,575
JBrowse link
G Abcb1b ATP-binding cassette, sub-family B member 1B IAGP MGI PMID:10906391 NCBI chr 5:8,848,147...8,916,314
Ensembl chr 5:8,848,147...8,916,315
JBrowse link
G Btnl1 butyrophilin-like 1 IAGP MGI PMID:27641500 NCBI chr17:34,596,097...34,605,136
Ensembl chr17:34,596,106...34,605,002
JBrowse link
G Ccl25 C-C motif chemokine ligand 25 IAGP MGI PMID:17548595 PMID:18439426 NCBI chr 8:4,375,207...4,410,020
Ensembl chr 8:4,375,210...4,410,020
JBrowse link
G Ccr10 C-C motif chemokine receptor 10 IAGP MGI PMID:20937851 NCBI chr11:101,063,824...101,066,269
Ensembl chr11:101,063,823...101,066,269
JBrowse link
G Ccr9 C-C motif chemokine receptor 9 IAGP MGI PMID:17548595 PMID:18439426 NCBI chr 9:123,596,276...123,612,522
Ensembl chr 9:123,507,504...123,613,395
JBrowse link
G Foxn1 forkhead box N1 IAGP MGI PMID:15699117 PMID:27641500 NCBI chr11:78,248,403...78,277,597
Ensembl chr11:78,248,403...78,277,384
JBrowse link
G Fyn Fyn proto-oncogene IAGP MGI PMID:8934570 PMID:9045930 NCBI chr10:39,245,735...39,441,377
Ensembl chr10:39,244,851...39,441,377
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:27641500 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 IAGP MGI PMID:7923373 PMID:8986714 NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926
JBrowse link
G Map3k14 mitogen-activated protein kinase kinase kinase 14 IAGP MGI PMID:15699117 NCBI chr11:103,110,590...103,158,227
Ensembl chr11:103,110,588...103,158,298
JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C IAGP MGI PMID:9725213 NCBI chr 1:137,990,601...138,103,491
Ensembl chr 1:137,990,599...138,103,446
JBrowse link
G Tnf tumor necrosis factor IAGP MGI PMID:18439426 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16659
    immune system phenotype 5592
      abnormal immune system morphology 4005
        abnormal immune system cell morphology 2799
          abnormal leukocyte morphology 2778
            abnormal mononuclear cell morphology 2235
              abnormal lymphocyte morphology 1808
                abnormal T cell morphology 1149
                  abnormal gamma-delta T cell morphology 111
                    abnormal mature gamma-delta T cell morphology 36
                      decreased mature gamma-delta T cell number 23
                        absent mature gamma-delta T cells 2
                        decreased gamma-delta intraepithelial T cell number + 20
Path 2
Term Annotations click to browse term
  mammalian phenotype 16659
    immune system phenotype 5592
      abnormal immune system morphology 4005
        abnormal immune system cell morphology 2799
          abnormal leukocyte morphology 2778
            abnormal mononuclear cell morphology 2235
              abnormal lymphocyte morphology 1808
                abnormal T cell morphology 1149
                  abnormal gamma-delta T cell morphology 111
                    abnormal gamma-delta T cell number 102
                      decreased gamma-delta T cell number 66
                        decreased mature gamma-delta T cell number 23
                          absent mature gamma-delta T cells 2
                          decreased gamma-delta intraepithelial T cell number + 20
paths to the root