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Pathways

MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal gamma-delta T cell morphology
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Accession:MP:0008343 term browser browse the term
Definition:any structural anomaly of an immature or mature T cell expressing an gamma-delta T cell receptor complex
Comment:Note that gamma-delta T cell have both thymic and extrathymic differentiation pathways.
Synonyms:exact_synonym: abnormal TCRgd cell morphology;   abnormal gamma-delta T-lymphocyte morphology



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abnormal gamma-delta T cell morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Btnl2 butyrophilin-like 2 IAGP MGI PMID:35017553 NCBI chr17:34,573,763...34,588,466
Ensembl chr17:34,573,796...34,588,469
JBrowse link
G Il21 interleukin 21 IAGP MGI PMID:17581589 NCBI chr 3:37,276,908...37,286,785
Ensembl chr 3:37,276,908...37,286,785
JBrowse link
G Itk IL2 inducible T cell kinase IAGP MGI PMID:19416854 NCBI chr11:46,215,975...46,280,342
Ensembl chr11:46,215,977...46,280,342
JBrowse link
G Lta lymphotoxin A IAGP MGI PMID:21419662 NCBI chr17:35,422,141...35,424,568
Ensembl chr17:35,422,141...35,424,327
JBrowse link
G Ltbr lymphotoxin B receptor IAGP MGI PMID:21419662 NCBI chr 6:125,283,534...125,291,026
Ensembl chr 6:125,283,534...125,290,848
JBrowse link
G Nfkb2 nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100 IAGP MGI PMID:21419662 NCBI chr19:46,285,478...46,300,839
Ensembl chr19:46,292,759...46,300,824
JBrowse link
G Rela v-rel reticuloendotheliosis viral oncogene homolog A (avian) IAGP MGI PMID:21419662 NCBI chr19:5,686,993...5,698,162
Ensembl chr19:5,687,511...5,698,158
JBrowse link
G Relb avian reticuloendotheliosis viral (v-rel) oncogene related B IAGP MGI PMID:21419662 NCBI chr 7:19,340,142...19,363,352
Ensembl chr 7:19,340,142...19,363,363
JBrowse link
G Tnf tumor necrosis factor IAGP MGI PMID:21419662 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983
JBrowse link
G Tnfsf14 tumor necrosis factor (ligand) superfamily, member 14 IAGP MGI PMID:21419662 NCBI chr17:57,496,437...57,501,182
Ensembl chr17:57,496,492...57,501,177
JBrowse link
abnormal CD8-positive, gamma-delta intraepithelial T cell morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G H2-T18 histocompatibility 2, T region locus 18 IAGP MGI PMID:19004778
G H2-T3 histocompatibility 2, T region locus 3 IAGP MGI PMID:19004778 NCBI chr17:36,496,463...36,501,043
Ensembl chr17:36,496,464...36,501,179
JBrowse link
abnormal dendritic epidermal T cell morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 IAGP MGI PMID:23633022 NCBI chr12:87,351,832...87,435,129
Ensembl chr12:87,351,832...87,435,129
JBrowse link
abnormal gamma-delta intraepithelial T cell morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr9 C-C motif chemokine receptor 9 IAGP MGI PMID:11884450 NCBI chr 9:123,596,276...123,612,522
Ensembl chr 9:123,507,504...123,613,395
JBrowse link
abnormal gamma-delta T cell differentiation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd247 CD247 antigen IAGP MGI PMID:22945921 NCBI chr 1:165,607,514...165,698,722
Ensembl chr 1:165,616,250...165,704,846
JBrowse link
G Il2rg interleukin 2 receptor, gamma chain IAGP MGI PMID:9334367 NCBI chr  X:100,307,991...100,311,861
Ensembl chr  X:100,307,984...100,311,861
JBrowse link
G Il7r interleukin 7 receptor IAGP MGI PMID:8692964 NCBI chr15:9,505,880...9,530,270
Ensembl chr15:9,505,874...9,530,262
JBrowse link
G Jag2 jagged 2 IAGP MGI PMID:9531541 NCBI chr12:112,871,439...112,893,437
Ensembl chr12:112,871,439...112,893,396
JBrowse link
G Lat linker for activation of T cells IAGP MGI PMID:12065839 PMID:12970761 NCBI chr 7:125,962,999...125,968,877
Ensembl chr 7:125,962,996...125,968,742
JBrowse link
G Rag2 recombination activating gene 2 IAGP MGI PMID:12531919 NCBI chr 2:101,455,057...101,462,873
Ensembl chr 2:101,455,063...101,462,874
JBrowse link
G Tcrd T cell receptor delta chain IAGP MGI PMID:8381716 NCBI chr14:54,183,530...54,396,655 JBrowse link
G Tcrg T cell receptor gamma chain IAGP MGI PMID:11911829 NCBI chr13:19,362,212...19,540,646 JBrowse link
abnormal gamma-delta T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Card14 caspase recruitment domain family, member 14 IAGP MGI PMID:29980436 NCBI chr11:119,197,923...119,236,205
Ensembl chr11:119,198,594...119,236,201
JBrowse link
G Ccl25 C-C motif chemokine ligand 25 IAGP MGI PMID:17548595 NCBI chr 8:4,375,207...4,410,020
Ensembl chr 8:4,375,210...4,410,020
JBrowse link
G Ccr9 C-C motif chemokine receptor 9 IAGP MGI PMID:17548595 NCBI chr 9:123,596,276...123,612,522
Ensembl chr 9:123,507,504...123,613,395
JBrowse link
G Cd4 CD4 antigen IAGP MGI PMID:8500525 NCBI chr 6:124,841,656...124,865,210
Ensembl chr 6:124,841,655...124,865,184
JBrowse link
G Cd8a CD8 subunit alpha IAGP MGI PMID:8500525 NCBI chr 6:71,350,411...71,356,155
Ensembl chr 6:71,350,411...71,356,157
JBrowse link
abnormal mature gamma-delta T cell morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lat linker for activation of T cells IAGP MGI PMID:12970761 NCBI chr 7:125,962,999...125,968,877
Ensembl chr 7:125,962,996...125,968,742
JBrowse link
absent gamma-delta intraepithelial T cell term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd247 CD247 antigen IAGP MGI PMID:9529325 NCBI chr 1:165,607,514...165,698,722
Ensembl chr 1:165,616,250...165,704,846
JBrowse link
G Fcer1g Fc receptor, IgE, high affinity I, gamma polypeptide IAGP MGI PMID:9529325 NCBI chr 1:171,057,141...171,061,918
Ensembl chr 1:171,057,141...171,061,934
JBrowse link
G Il2rg interleukin 2 receptor, gamma chain IAGP MGI PMID:7697543 PMID:9334367 NCBI chr  X:100,307,991...100,311,861
Ensembl chr  X:100,307,984...100,311,861
JBrowse link
absent gamma-delta T cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:22770884 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Il17a interleukin 17A IAGP MGI PMID:22770884 NCBI chr 1:20,801,129...20,804,720
Ensembl chr 1:20,801,129...20,804,720
JBrowse link
G Il17f interleukin 17F IAGP MGI PMID:22770884 NCBI chr 1:20,847,370...20,855,498
Ensembl chr 1:20,847,370...20,860,841
JBrowse link
G Il2rg interleukin 2 receptor, gamma chain IAGP MGI PMID:7697543 PMID:9334367 NCBI chr  X:100,307,991...100,311,861
Ensembl chr  X:100,307,984...100,311,861
JBrowse link
G Rag1 recombination activating 1 IAGP MGI PMID:22770884 NCBI chr 2:101,468,597...101,479,877
Ensembl chr 2:101,468,627...101,479,846
JBrowse link
G Rag2 recombination activating gene 2 IAGP MGI PMID:17617584 NCBI chr 2:101,455,057...101,462,873
Ensembl chr 2:101,455,063...101,462,874
JBrowse link
G Tcra T cell receptor alpha chain IAGP MGI PMID:17617584 PMID:18242214 NCBI chr14:52,665,424...54,461,655 JBrowse link
G Tcrb T cell receptor beta chain IAGP MGI PMID:17617584 NCBI chr 6:40,868,230...41,535,305 JBrowse link
G Tcrd T cell receptor delta chain IAGP MGI PMID:8381716 NCBI chr14:54,183,530...54,396,655 JBrowse link
G Tcrg T cell receptor gamma chain IAGP MGI PMID:18242214 NCBI chr13:19,362,212...19,540,646 JBrowse link
G Trdc T cell receptor delta, constant region IAGP MGI PMID:22770884 NCBI chr14:54,380,308...54,383,565
Ensembl chr14:54,380,308...54,386,325
JBrowse link
absent mature gamma-delta T cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il7r interleukin 7 receptor IAGP MGI PMID:8692964 NCBI chr15:9,505,880...9,530,270
Ensembl chr15:9,505,874...9,530,262
JBrowse link
G Lat linker for activation of T cells IAGP MGI PMID:12970761 NCBI chr 7:125,962,999...125,968,877
Ensembl chr 7:125,962,996...125,968,742
JBrowse link
decreased CD5-positive gamma-delta T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Sik3 SIK family kinase 3 IEA MGI NCBI chr 9:45,924,099...46,135,492
Ensembl chr 9:45,924,118...46,135,492
JBrowse link
decreased CD8-positive, gamma-delta intraepithelial T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ccr9 C-C motif chemokine receptor 9 IAGP MGI PMID:11884450 NCBI chr 9:123,596,276...123,612,522
Ensembl chr 9:123,507,504...123,613,395
JBrowse link
G Gpr18 G protein-coupled receptor 18 IAGP MGI PMID:25348153 NCBI chr14:122,148,846...122,153,300
Ensembl chr14:122,148,665...122,153,193
JBrowse link
G Il15 interleukin 15 IAGP MGI PMID:19913445 NCBI chr 8:83,058,253...83,129,883
Ensembl chr 8:83,058,261...83,129,851
JBrowse link
G Il15ra interleukin 15 receptor, alpha chain IAGP MGI PMID:19913445 NCBI chr 2:11,709,992...11,738,796
Ensembl chr 2:11,710,101...11,739,128
JBrowse link
decreased dendritic epidermal T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mkrn2 makorin, ring finger protein, 2 IEA MGI NCBI chr 6:115,578,844...115,598,647
Ensembl chr 6:115,578,863...115,599,585
JBrowse link
G Zdhhc2 zinc finger, DHHC domain containing 2 IAGP MGI PMID:33488612 NCBI chr 8:40,876,526...40,946,178
Ensembl chr 8:40,876,856...40,963,309
JBrowse link
decreased gamma-delta intraepithelial T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abcb1a ATP-binding cassette, sub-family B member 1A IAGP MGI PMID:10906391 NCBI chr 5:8,617,091...8,798,575
Ensembl chr 5:8,710,077...8,798,575
JBrowse link
G Abcb1b ATP-binding cassette, sub-family B member 1B IAGP MGI PMID:10906391 NCBI chr 5:8,848,147...8,916,314
Ensembl chr 5:8,848,147...8,916,315
JBrowse link
G Btnl1 butyrophilin-like 1 IAGP MGI PMID:27641500 NCBI chr17:34,596,097...34,605,136
Ensembl chr17:34,596,106...34,605,002
JBrowse link
G Ccl25 C-C motif chemokine ligand 25 IAGP MGI PMID:17548595 PMID:18439426 NCBI chr 8:4,375,207...4,410,020
Ensembl chr 8:4,375,210...4,410,020
JBrowse link
G Ccr10 C-C motif chemokine receptor 10 IAGP MGI PMID:20937851 NCBI chr11:101,063,824...101,066,269
Ensembl chr11:101,063,823...101,066,269
JBrowse link
G Ccr9 C-C motif chemokine receptor 9 IAGP MGI PMID:17548595 PMID:18439426 NCBI chr 9:123,596,276...123,612,522
Ensembl chr 9:123,507,504...123,613,395
JBrowse link
G Foxn1 forkhead box N1 IAGP MGI PMID:15699117 PMID:27641500 NCBI chr11:78,248,403...78,277,597
Ensembl chr11:78,248,403...78,277,384
JBrowse link
G Fyn Fyn proto-oncogene IAGP MGI PMID:8934570 PMID:9045930 NCBI chr10:39,245,735...39,441,377
Ensembl chr10:39,244,851...39,441,377
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:27641500 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 IAGP MGI PMID:7923373 PMID:8986714 NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926
JBrowse link
G Map3k14 mitogen-activated protein kinase kinase kinase 14 IAGP MGI PMID:15699117 NCBI chr11:103,110,590...103,158,227
Ensembl chr11:103,110,588...103,158,298
JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C IAGP MGI PMID:9725213 NCBI chr 1:137,990,597...138,103,491
Ensembl chr 1:137,990,599...138,103,446
JBrowse link
G Tnf tumor necrosis factor IAGP MGI PMID:18439426 NCBI chr17:35,418,343...35,420,983
Ensembl chr17:35,418,357...35,420,983
JBrowse link
decreased gamma-delta T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 1700016L21Rik RIKEN cDNA 1700016L21 gene IAGP MGI PMID:23064362 NCBI chr 1:80,423,649...80,453,377
Ensembl chr 1:80,405,912...80,457,752
JBrowse link
G Bcl2a1a B cell leukemia/lymphoma 2 related protein A1a IAGP MGI PMID:28085150 NCBI chr 9:88,838,973...88,844,469
Ensembl chr 9:88,838,953...88,844,472
JBrowse link
G Bcl2a1b B cell leukemia/lymphoma 2 related protein A1b IAGP MGI PMID:28085150 NCBI chr 9:89,081,326...89,089,891
Ensembl chr 9:89,081,262...89,089,880
JBrowse link
G Bcl2a1d B cell leukemia/lymphoma 2 related protein A1d IAGP MGI PMID:28085150 NCBI chr 9:88,605,341...88,613,903
Ensembl chr 9:88,605,338...88,613,967
JBrowse link
G Card11 caspase recruitment domain family, member 11 IAGP MGI PMID:19260764 NCBI chr 5:140,858,754...140,986,351
Ensembl chr 5:140,858,745...140,986,337
JBrowse link
G Clpp caseinolytic mitochondrial matrix peptidase proteolytic subunit IEA MGI NCBI chr17:57,297,264...57,303,371
Ensembl chr17:57,297,305...57,303,188
JBrowse link
G Commd10 COMM domain containing 10 IAGP MGI PMID:21258009 NCBI chr18:47,091,917...47,242,435
Ensembl chr18:47,091,883...47,367,351
JBrowse link
G Ctnnb1 catenin beta 1 IAGP MGI PMID:23918954 NCBI chr 9:120,762,466...120,789,573
Ensembl chr 9:120,758,282...120,789,573
JBrowse link
G Dntt deoxynucleotidyltransferase, terminal IAGP MGI PMID:10792495 NCBI chr19:41,017,701...41,047,964
Ensembl chr19:41,017,714...41,047,964
JBrowse link
G Fyn Fyn proto-oncogene IAGP MGI PMID:8934569 NCBI chr10:39,245,735...39,441,377
Ensembl chr10:39,244,851...39,441,377
JBrowse link
G Gata3 GATA binding protein 3 IAGP MGI PMID:19934022 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:22770884 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G H2-Q10 histocompatibility 2, Q region locus 10 IAGP MGI PMID:30537346 NCBI chr17:35,780,986...35,785,460
Ensembl chr17:35,780,986...35,785,460
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IAGP MGI PMID:21093323 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614
JBrowse link
G Il1rl2 interleukin 1 receptor-like 2 IAGP MGI PMID:23064362 NCBI chr 1:40,363,697...40,406,722
Ensembl chr 1:40,363,770...40,406,722
JBrowse link
G Il23a interleukin 23, alpha subunit p19 IAGP MGI PMID:23064362 NCBI chr10:128,132,009...128,133,953
Ensembl chr10:128,132,008...128,134,621
JBrowse link
G Jag2 jagged 2 IAGP MGI PMID:9531541 NCBI chr12:112,871,439...112,893,437
Ensembl chr12:112,871,439...112,893,396
JBrowse link
G Krt14 keratin 14 IAGP MGI PMID:23918954 NCBI chr11:100,093,988...100,098,336
Ensembl chr11:100,093,988...100,098,374
JBrowse link
G Nfkb2 nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100 IAGP MGI PMID:21419662 NCBI chr19:46,285,478...46,300,839
Ensembl chr19:46,292,759...46,300,824
JBrowse link
G Nlk nemo like kinase IAGP MGI PMID:11745377 NCBI chr11:78,457,994...78,588,848
Ensembl chr11:78,457,994...78,588,199
JBrowse link
G Pole3 polymerase (DNA directed), epsilon 3 (p17 subunit) IAGP MGI PMID:32553171 NCBI chr 4:62,440,889...62,443,305
Ensembl chr 4:62,440,886...62,443,305
JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide IAGP MGI PMID:21482716 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099
JBrowse link
G Rag1 recombination activating 1 IAGP MGI PMID:19126872 PMID:22770884 NCBI chr 2:101,468,597...101,479,877
Ensembl chr 2:101,468,627...101,479,846
JBrowse link
G Rnf168 ring finger protein 168 IAGP MGI PMID:21552324 NCBI chr16:32,096,279...32,120,260
Ensembl chr16:32,096,277...32,120,252
JBrowse link
G Sik3 SIK family kinase 3 IEA MGI NCBI chr 9:45,924,099...46,135,492
Ensembl chr 9:45,924,118...46,135,492
JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 IAGP MGI PMID:21746917 NCBI chr17:80,701,181...80,787,882
Ensembl chr17:80,701,180...80,787,882
JBrowse link
G Sox13 SRY (sex determining region Y)-box 13 IAGP MGI PMID:17218525 NCBI chr 1:133,310,038...133,352,198
Ensembl chr 1:133,310,041...133,352,115
JBrowse link
G Trappc9 trafficking protein particle complex 9 IEA MGI NCBI chr15:72,461,469...72,933,086
Ensembl chr15:72,461,469...72,933,053
JBrowse link
G Trdc T cell receptor delta, constant region IAGP MGI PMID:22770884 NCBI chr14:54,380,308...54,383,565
Ensembl chr14:54,380,308...54,386,325
JBrowse link
G Trgc1 T cell receptor gamma, constant 1 IAGP MGI PMID:15345225 NCBI chr13:19,398,273...19,400,788
Ensembl chr13:19,398,273...19,401,194
JBrowse link
G Wls wntless WNT ligand secretion mediator IAGP MGI PMID:23918954 NCBI chr 3:159,545,287...159,644,302
Ensembl chr 3:159,545,309...159,644,300
JBrowse link
G Zbtb17 zinc finger and BTB domain containing 17 IAGP MGI PMID:21258009 NCBI chr 4:141,171,984...141,195,248
Ensembl chr 4:141,171,965...141,195,241
JBrowse link
decreased mature gamma-delta T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ikzf1 IKAROS family zinc finger 1 IAGP MGI PMID:8986714 NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926
JBrowse link
G Nckap1l NCK associated protein 1 like IAGP MGI PMID:19015308 NCBI chr15:103,362,219...103,411,288
Ensembl chr15:103,362,221...103,407,237
JBrowse link
decreased memory-marker gamma-delta T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef1 Rho guanine nucleotide exchange factor 1 IEA MGI NCBI chr 7:24,601,762...24,626,019
Ensembl chr 7:24,602,337...24,626,019
JBrowse link
G Cog6 component of oligomeric golgi complex 6 IEA MGI NCBI chr 3:52,889,544...52,924,644
Ensembl chr 3:52,889,296...52,924,658
JBrowse link
G Duoxa2 dual oxidase maturation factor 2 IEA MGI NCBI chr 2:122,129,381...122,133,088
Ensembl chr 2:122,129,381...122,133,366
JBrowse link
increased CD5-positive gamma-delta T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cgrrf1 cell growth regulator with ring finger domain 1 IEA MGI NCBI chr14:47,069,591...47,091,655
Ensembl chr14:47,069,582...47,091,650
JBrowse link
G Cog6 component of oligomeric golgi complex 6 IEA MGI NCBI chr 3:52,889,544...52,924,644
Ensembl chr 3:52,889,296...52,924,658
JBrowse link
G Dph6 diphthamine biosynthesis 6 IEA MGI NCBI chr 2:114,346,897...114,485,518
Ensembl chr 2:114,346,897...114,485,445
JBrowse link
G Hbs1l Hbs1-like (S. cerevisiae) IEA MGI NCBI chr10:21,171,876...21,244,788
Ensembl chr10:21,171,878...21,244,797
JBrowse link
increased dendritic epidermal T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ttc7 tetratricopeptide repeat domain 7 IAGP MGI PMID:8406628 NCBI chr17:87,590,328...87,689,197
Ensembl chr17:87,590,314...87,689,197
JBrowse link
increased gamma-delta intraepithelial T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin IAGP MGI PMID:1346234 NCBI chr 2:121,978,168...121,983,563
Ensembl chr 2:121,978,167...121,983,564
JBrowse link
G Fas Fas cell surface death receptor IAGP MGI PMID:7540652 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 IAGP MGI PMID:26132627 NCBI chr 4:31,963,659...32,023,470
Ensembl chr 4:31,964,097...32,023,467
JBrowse link
G Tcra T cell receptor alpha chain IAGP MGI PMID:7540652 PMID:8104709 NCBI chr14:52,665,424...54,461,655 JBrowse link
increased gamma-delta T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arhgef1 Rho guanine nucleotide exchange factor 1 IEA MGI NCBI chr 7:24,601,762...24,626,019
Ensembl chr 7:24,602,337...24,626,019
JBrowse link
G B2m beta-2 microglobulin IAGP MGI PMID:1346234 NCBI chr 2:121,978,168...121,983,563
Ensembl chr 2:121,978,167...121,983,564
JBrowse link
G Bcl11a BCL11 transcription factor A IAGP MGI PMID:12717432 NCBI chr11:24,026,498...24,123,558
Ensembl chr11:24,028,056...24,124,123
JBrowse link
G Bcl11b B cell leukemia/lymphoma 11B IAGP MGI PMID:17998389 NCBI chr12:107,876,662...107,970,404
Ensembl chr12:107,876,662...107,969,861
JBrowse link
G Camsap3 calmodulin regulated spectrin-associated protein family, member 3 IEA MGI NCBI chr 8:3,637,237...3,659,075
Ensembl chr 8:3,637,293...3,659,075
JBrowse link
G Ccr9 C-C motif chemokine receptor 9 IAGP MGI PMID:11884450 NCBI chr 9:123,596,276...123,612,522
Ensembl chr 9:123,507,504...123,613,395
JBrowse link
G Cgrrf1 cell growth regulator with ring finger domain 1 IEA MGI NCBI chr14:47,069,591...47,091,655
Ensembl chr14:47,069,582...47,091,650
JBrowse link
G Cog6 component of oligomeric golgi complex 6 IEA MGI NCBI chr 3:52,889,544...52,924,644
Ensembl chr 3:52,889,296...52,924,658
JBrowse link
G Cxcr2 C-X-C motif chemokine receptor 2 IEA MGI NCBI chr 1:74,193,153...74,200,405
Ensembl chr 1:74,193,150...74,200,405
JBrowse link
G Dicer1 dicer 1, ribonuclease type III IAGP MGI PMID:15867090 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211
JBrowse link
G Dph6 diphthamine biosynthesis 6 IEA MGI NCBI chr 2:114,346,897...114,485,518
Ensembl chr 2:114,346,897...114,485,445
JBrowse link
G Drosha drosha, ribonuclease type III IAGP MGI PMID:18725527 NCBI chr15:12,824,893...12,935,377
Ensembl chr15:12,824,901...12,935,377
JBrowse link
G Fas Fas cell surface death receptor IAGP MGI PMID:7540652 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 IAGP MGI PMID:17304214 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079
JBrowse link
G Gmds GDP-mannose 4, 6-dehydratase IEA MGI NCBI chr13:32,003,566...32,522,744
Ensembl chr13:32,003,562...32,522,723
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:22770884 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Id3 inhibitor of DNA binding 3 IAGP MGI PMID:20932862 PMID:21857655 NCBI chr 4:135,871,133...135,872,703
Ensembl chr 4:135,870,808...135,873,066
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 IAGP MGI PMID:24013668 NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926
JBrowse link
G Il17a interleukin 17A IAGP MGI PMID:22770884 PMID:23064362 NCBI chr 1:20,801,129...20,804,720
Ensembl chr 1:20,801,129...20,804,720
JBrowse link
G Il17f interleukin 17F IAGP MGI PMID:22770884 NCBI chr 1:20,847,370...20,855,498
Ensembl chr 1:20,847,370...20,860,841
JBrowse link
G Il17ra interleukin 17 receptor A IAGP MGI PMID:22951726 NCBI chr 6:120,440,143...120,460,692
Ensembl chr 6:120,440,208...120,464,520
JBrowse link
G Il7r interleukin 7 receptor IAGP MGI PMID:23267098 NCBI chr15:9,505,880...9,530,270
Ensembl chr15:9,505,874...9,530,262
JBrowse link
G Lat linker for activation of T cells IAGP MGI PMID:19380807 NCBI chr 7:125,962,999...125,968,877
Ensembl chr 7:125,962,996...125,968,742
JBrowse link
G Lcp2 lymphocyte cytosolic protein 2 IAGP MGI PMID:16186188 NCBI chr11:33,996,928...34,042,281
Ensembl chr11:33,996,920...34,042,295
JBrowse link
G Nmt1 N-myristoyltransferase 1 IAGP MGI PMID:26423150 NCBI chr11:102,919,163...102,959,734
Ensembl chr11:102,919,016...102,959,738
JBrowse link
G Nmt2 N-myristoyltransferase 2 IAGP MGI PMID:26423150 NCBI chr 2:3,285,249...3,329,914
Ensembl chr 2:3,285,249...3,329,914
JBrowse link
G Prnp prion protein IAGP MGI PMID:16517717 NCBI chr 2:131,751,848...131,780,356
Ensembl chr 2:131,751,848...131,780,349
JBrowse link
G Ptcra pre T cell antigen receptor alpha IAGP MGI PMID:21030681 NCBI chr17:47,066,589...47,074,638
Ensembl chr17:47,066,589...47,074,638
JBrowse link
G Rag1 recombination activating 1 IAGP MGI PMID:22770884 NCBI chr 2:101,468,597...101,479,877
Ensembl chr 2:101,468,627...101,479,846
JBrowse link
G Rhoh ras homolog family member H IAGP MGI PMID:17119112 NCBI chr 5:66,018,092...66,054,043
Ensembl chr 5:66,018,556...66,054,043
JBrowse link
G Setd2 SET domain containing 2 IAGP MGI PMID:28424246 NCBI chr 9:110,361,368...110,447,703
Ensembl chr 9:110,361,665...110,447,701
JBrowse link
G Sptlc2 serine palmitoyltransferase, long chain base subunit 2 IAGP MGI PMID:23633022 NCBI chr12:87,351,832...87,435,129
Ensembl chr12:87,351,832...87,435,129
JBrowse link
G Tcra T cell receptor alpha chain IAGP MGI PMID:7540652 PMID:7991563 NCBI chr14:52,665,424...54,461,655 JBrowse link
G Traf3ip3 TRAF3 interacting protein 3 IAGP MGI PMID:26195727 NCBI chr 1:192,857,812...192,883,854
Ensembl chr 1:192,857,761...192,884,011
JBrowse link
G Trdc T cell receptor delta, constant region IAGP MGI PMID:22770884 NCBI chr14:54,380,308...54,383,565
Ensembl chr14:54,380,308...54,386,325
JBrowse link
G Xpnpep1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble IEA MGI NCBI chr19:52,919,710...53,027,093
Ensembl chr19:52,920,357...53,028,645
JBrowse link
G Zdhhc2 zinc finger, DHHC domain containing 2 IAGP MGI PMID:33488612 NCBI chr 8:40,876,526...40,946,178
Ensembl chr 8:40,876,856...40,963,309
JBrowse link
increased KLRG1-positive gamma-delta T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bach2 BTB and CNC homology, basic leucine zipper transcription factor 2 IEA MGI NCBI chr 4:32,238,413...32,586,109
Ensembl chr 4:32,238,804...32,586,108
JBrowse link
increased mature gamma-delta T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Itk IL2 inducible T cell kinase IAGP MGI PMID:19416854 NCBI chr11:46,215,975...46,280,342
Ensembl chr11:46,215,977...46,280,342
JBrowse link
G Lat linker for activation of T cells IAGP MGI PMID:12970761 NCBI chr 7:125,962,999...125,968,877
Ensembl chr 7:125,962,996...125,968,742
JBrowse link
G Sit1 suppression inducing transmembrane adaptor 1 IAGP MGI PMID:16107703 NCBI chr 4:43,482,083...43,483,709
Ensembl chr 4:43,482,081...43,483,734
JBrowse link
G Tcra T cell receptor alpha chain IAGP MGI PMID:18242214 NCBI chr14:52,665,424...54,461,655 JBrowse link
increased memory-marker gamma-delta T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cog6 component of oligomeric golgi complex 6 IEA MGI NCBI chr 3:52,889,544...52,924,644
Ensembl chr 3:52,889,296...52,924,658
JBrowse link
G Cxcr2 C-X-C motif chemokine receptor 2 IEA MGI NCBI chr 1:74,193,153...74,200,405
Ensembl chr 1:74,193,150...74,200,405
JBrowse link
G Dph6 diphthamine biosynthesis 6 IEA MGI NCBI chr 2:114,346,897...114,485,518
Ensembl chr 2:114,346,897...114,485,445
JBrowse link
G Prkab1 protein kinase, AMP-activated, beta 1 non-catalytic subunit IEA MGI NCBI chr 5:116,151,654...116,162,449
Ensembl chr 5:116,151,645...116,162,567
JBrowse link
G Rwdd1 RWD domain containing 1 IEA MGI NCBI chr10:33,872,551...33,895,612
Ensembl chr10:33,872,551...33,895,620
JBrowse link
G Sik3 SIK family kinase 3 IEA MGI NCBI chr 9:45,924,099...46,135,492
Ensembl chr 9:45,924,118...46,135,492
JBrowse link

Term paths to the root
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Term Annotations click to browse term
  mammalian phenotype 16476
    hematopoietic system phenotype 5344
      abnormal hematopoietic system morphology/development 4885
        abnormal hematopoietic cell morphology 4062
          abnormal leukocyte morphology 2710
            abnormal mononuclear cell morphology 2188
              abnormal lymphocyte morphology 1770
                abnormal T cell morphology 1132
                  abnormal gamma-delta T cell morphology 108
                    abnormal gamma-delta T cell differentiation 8
                    abnormal gamma-delta T cell number + 99
                    abnormal mature gamma-delta T cell morphology + 34
paths to the root