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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal sternocostal joint morphology
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Accession:MP:0008148 term browser browse the term
Definition:any anomaly in the normal joining of the ribs to the sternum
Synonyms:exact_synonym: abnormal rib-sternum attachment



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abnormal sternocostal joint morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp7 bone morphogenetic protein 7 IAGP MGI PMID:7590254 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114
JBrowse link
G Bmpr2 bone morphogenetic protein receptor type 2 IAGP MGI PMID:15542835 NCBI chr 1:59,802,721...59,917,240
Ensembl chr 1:59,802,559...59,918,173
JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A IAGP MGI PMID:9925645 PMID:11076674 NCBI chr17:29,309,953...29,319,696
Ensembl chr17:29,309,950...29,319,701
JBrowse link
G Cdkn1c cyclin dependent kinase inhibitor 1C IAGP MGI PMID:9925645 NCBI chr 7:143,012,076...143,014,735
Ensembl chr 7:143,012,076...143,014,787
JBrowse link
G Cenpj centromere protein J IAGP MGI PMID:23166506 NCBI chr14:56,764,218...56,812,950
Ensembl chr14:56,764,218...56,812,882
JBrowse link
G Deaf1 DEAF1, transcription factor IAGP MGI PMID:14966286 NCBI chr 7:140,877,089...140,918,758
Ensembl chr 7:140,877,093...140,907,603
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:10471511 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 IAGP MGI PMID:9694798 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734
JBrowse link
G Foxc1 forkhead box C1 IAGP MGI PMID:25808752 NCBI chr13:31,990,629...31,994,618
Ensembl chr13:31,990,616...31,996,459
JBrowse link
G Fst follistatin IAGP MGI PMID:7885475 NCBI chr13:114,588,798...114,595,522
Ensembl chr13:114,588,826...114,595,487
JBrowse link
G Gdf11 growth differentiation factor 11 IAGP MGI PMID:24019467 NCBI chr10:128,716,393...128,727,587
Ensembl chr10:128,718,164...128,727,587
JBrowse link
G Gnai1 G protein subunit alpha i1 IAGP MGI PMID:23236180 NCBI chr 5:18,470,133...18,565,411
Ensembl chr 5:18,470,133...18,565,353
JBrowse link
G Gnai2 G protein subunit alpha i2 IAGP MGI PMID:23236180 NCBI chr 9:107,491,324...107,512,542
Ensembl chr 9:107,491,324...107,512,566
JBrowse link
G Gnai3 G protein subunit alpha i3 IAGP MGI PMID:23236180 NCBI chr 3:108,014,591...108,053,468
Ensembl chr 3:108,014,596...108,053,462
JBrowse link
G Gsc goosecoid homeobox IAGP MGI PMID:7555726 PMID:9533949 NCBI chr12:104,437,468...104,439,495
Ensembl chr12:104,437,468...104,439,589
JBrowse link
G Hif1a hypoxia inducible factor 1, alpha subunit IAGP MGI PMID:11691837 NCBI chr12:73,948,186...73,994,304
Ensembl chr12:73,948,149...73,994,304
JBrowse link
G Hoxb8 homeobox B8 IAGP MGI PMID:10559485 PMID:14623233 NCBI chr11:96,170,227...96,176,151
Ensembl chr11:96,172,731...96,176,141
JBrowse link
G Hoxb9 homeobox B9 IAGP MGI PMID:9013929 NCBI chr11:96,162,156...96,167,421
Ensembl chr11:96,162,283...96,167,421
JBrowse link
G Hoxc4 homeobox C4 IAGP MGI PMID:8626021 PMID:8660891 NCBI chr15:102,926,531...102,945,281
Ensembl chr15:102,927,366...102,945,278
JBrowse link
G Hoxc8 homeobox C8 IAGP MGI PMID:1348969 PMID:19621436 NCBI chr15:102,898,971...102,902,707
Ensembl chr15:102,899,039...102,902,543
JBrowse link
G Hoxc9 homeobox C9 IAGP MGI PMID:7547473 NCBI chr15:102,885,467...102,893,324
Ensembl chr15:102,884,874...102,893,531
JBrowse link
G Intu inturned planar cell polarity protein IAGP MGI PMID:25774014 NCBI chr 3:40,585,559...40,659,206
Ensembl chr 3:40,585,435...40,659,204
JBrowse link
G Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase IAGP MGI PMID:14960495 NCBI chr 5:140,593,096...140,601,300
Ensembl chr 5:140,593,075...140,601,300
JBrowse link
G Lmo4 LIM domain only 4 IAGP MGI PMID:14966286 NCBI chr 3:143,894,291...143,911,016
Ensembl chr 3:143,894,291...143,910,981
JBrowse link
G Mapk8 mitogen-activated protein kinase 8 IAGP MGI PMID:30664861 NCBI chr14:33,099,855...33,169,213
Ensembl chr14:33,099,855...33,169,115
JBrowse link
G Mapk9 mitogen-activated protein kinase 9 IAGP MGI PMID:30664861 NCBI chr11:49,737,558...49,777,248
Ensembl chr11:49,737,578...49,777,248
JBrowse link
G Mdfi MyoD family inhibitor IAGP MGI PMID:9799236 NCBI chr17:48,126,253...48,145,616
Ensembl chr17:48,126,253...48,145,616
JBrowse link
G Meox2 mesenchyme homeobox 2 IAGP MGI PMID:18378898 NCBI chr12:37,158,539...37,229,533
Ensembl chr12:37,158,539...37,229,533
JBrowse link
G Myf5 myogenic factor 5 IAGP MGI PMID:1423602 PMID:7720708 PMID:9268580 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995
JBrowse link
G Myf6 myogenic factor 6 IAGP MGI PMID:7588068 PMID:7720708 PMID:9268580 PMID:9609818 NCBI chr10:107,328,709...107,330,584
Ensembl chr10:107,328,714...107,330,598
JBrowse link
G Myog myogenin IAGP MGI PMID:9609818 NCBI chr 1:134,217,742...134,220,286
Ensembl chr 1:134,217,727...134,220,286
JBrowse link
G Nabp2 nucleic acid binding protein 2 IAGP MGI PMID:23408915 NCBI chr10:128,237,263...128,247,426
Ensembl chr10:128,237,264...128,247,361
JBrowse link
G Pcgf2 polycomb group ring finger 2 IAGP MGI PMID:8625838 PMID:15741318 NCBI chr11:97,579,647...97,593,260
Ensembl chr11:97,579,649...97,591,323
JBrowse link
G Pcgf6 polycomb group ring finger 6 IAGP MGI PMID:28304275 NCBI chr19:47,022,056...47,039,379
Ensembl chr19:47,022,056...47,039,345
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 IAGP MGI PMID:18378898 NCBI chr19:17,409,678...17,815,076
Ensembl chr19:17,409,683...17,814,996
JBrowse link
G Pds5a PDS5 cohesin associated factor A IAGP MGI PMID:19412548 NCBI chr 5:65,763,062...65,855,579
Ensembl chr 5:65,763,064...65,855,616
JBrowse link
G Phc1 polyhomeotic 1 IAGP MGI PMID:16024804 NCBI chr 6:122,294,690...122,317,551
Ensembl chr 6:122,294,690...122,317,520
JBrowse link
G Phc2 polyhomeotic 2 IAGP MGI PMID:16024804 NCBI chr 4:128,548,448...128,646,674
Ensembl chr 4:128,548,495...128,646,674
JBrowse link
G Qdpr quinoid dihydropteridine reductase IAGP MGI PMID:17151244 NCBI chr 5:45,591,374...45,607,571
Ensembl chr 5:45,591,363...45,607,578
JBrowse link
G Rb1 RB transcriptional corepressor 1 IAGP MGI PMID:11076674 NCBI chr14:73,430,298...73,563,446
Ensembl chr14:73,421,113...73,563,262
JBrowse link
G Scmh1 sex comb on midleg homolog 1 IAGP MGI PMID:17215307 NCBI chr 4:120,262,347...120,387,397
Ensembl chr 4:120,262,478...120,387,383
JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 IAGP MGI PMID:15741318 NCBI chr 1:55,024,328...55,066,660
Ensembl chr 1:55,024,328...55,066,640
JBrowse link
G Six1 sine oculis-related homeobox 1 IAGP MGI PMID:12668636 PMID:15788460 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link
G Six4 sine oculis-related homeobox 4 IAGP MGI PMID:15788460 NCBI chr12:73,146,383...73,160,201
Ensembl chr12:73,146,383...73,160,230
JBrowse link
G Slc29a1 solute carrier family 29 (nucleoside transporters), member 1 IAGP MGI PMID:27237608 NCBI chr17:45,896,126...45,910,544
Ensembl chr17:45,896,126...45,910,532
JBrowse link
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 IAGP MGI PMID:10415348 NCBI chr 6:65,019,577...65,093,045
Ensembl chr 6:65,019,567...65,093,045
JBrowse link
G Tapt1 transmembrane anterior posterior transformation 1 IAGP MGI PMID:16024820 PMID:17151244 NCBI chr 5:44,332,496...44,384,411
Ensembl chr 5:44,332,496...44,383,968
JBrowse link
G Tcf15 transcription factor 15 IAGP MGI PMID:8955271 NCBI chr 2:151,984,973...151,991,017
Ensembl chr 2:151,985,481...151,991,017
JBrowse link
G Traf4 TNF receptor associated factor 4 IAGP MGI PMID:11943846 NCBI chr11:78,049,249...78,056,405
Ensembl chr11:78,049,325...78,056,415
JBrowse link
G Tshz1 teashirt zinc finger family member 1 IAGP MGI PMID:17586487 NCBI chr18:84,029,752...84,105,833
Ensembl chr18:84,029,752...84,105,831
JBrowse link
G Vangl2 VANGL planar cell polarity 2 IAGP MGI PMID:13435227 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011
JBrowse link
G Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 IAGP MGI PMID:24019467 NCBI chr11:94,126,777...94,138,613
Ensembl chr11:94,126,782...94,136,831
JBrowse link
asymmetric sternocostal joints term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 2610005L07Rik RIKEN cDNA 2610005L07 gene IAGP MGI PMID:17143286 NCBI chr 8:20,016,466...20,055,498
Ensembl chr 8:20,016,466...20,055,498
Ensembl chr 8:20,016,466...20,055,498
JBrowse link
G Arid5b AT-rich interaction domain 5B IAGP MGI PMID:17143286 NCBI chr10:67,928,353...68,114,596
Ensembl chr10:67,928,350...68,114,570
JBrowse link
G Ash1l ASH1 like histone lysine methyltransferase IAGP MGI PMID:26333994 NCBI chr 3:88,857,721...88,986,682
Ensembl chr 3:88,857,929...88,986,682
JBrowse link
G Bmp7 bone morphogenetic protein 7 IAGP MGI PMID:7590255 NCBI chr 2:172,709,805...172,782,114
Ensembl chr 2:172,709,805...172,782,114
JBrowse link
G Chuk conserved helix-loop-helix ubiquitous kinase IAGP MGI PMID:10346820 NCBI chr19:44,061,773...44,095,940
Ensembl chr19:44,061,774...44,095,919
JBrowse link
G Csrnp1 cysteine-serine-rich nuclear protein 1 IAGP MGI PMID:17143286 NCBI chr 9:119,800,229...119,813,808
Ensembl chr 9:119,800,229...119,813,724
JBrowse link
G Dppa4 developmental pluripotency associated 4 IAGP MGI PMID:19332562 NCBI chr16:48,104,098...48,114,655
Ensembl chr16:48,104,096...48,114,600
JBrowse link
G Efnb1 ephrin B1 IAGP MGI PMID:12919674 NCBI chr  X:98,179,667...98,192,628
Ensembl chr  X:98,179,736...98,192,597
JBrowse link
G En1 engrailed 1 IAGP MGI PMID:9778510 NCBI chr 1:120,530,246...120,535,719
Ensembl chr 1:120,530,147...120,535,721
JBrowse link
G Fstl1 follistatin-like 1 IAGP MGI PMID:21826198 NCBI chr16:37,597,417...37,656,878
Ensembl chr16:37,597,235...37,656,876
JBrowse link
G Gnai1 G protein subunit alpha i1 IAGP MGI PMID:23236180 NCBI chr 5:18,470,133...18,565,411
Ensembl chr 5:18,470,133...18,565,353
JBrowse link
G Gnai3 G protein subunit alpha i3 IAGP MGI PMID:23236180 NCBI chr 3:108,014,591...108,053,468
Ensembl chr 3:108,014,596...108,053,462
JBrowse link
G Gpc3 glypican 3 IAGP MGI PMID:11846487 NCBI chr  X:51,361,303...51,702,851
Ensembl chr  X:51,361,303...51,702,827
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:18331721 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G H19 H19, imprinted maternally expressed transcript IAGP MGI PMID:11846487 NCBI chr 7:142,129,267...142,131,883
Ensembl chr 7:142,129,262...142,131,917
JBrowse link
G Hoxa10 homeobox A10 IAGP MGI PMID:7667266 NCBI chr 6:52,208,177...52,217,658
Ensembl chr 6:52,208,177...52,217,834
JBrowse link
G Hoxa5 homeobox A5 IAGP MGI PMID:7901120 NCBI chr 6:52,178,768...52,181,437
Ensembl chr 6:52,178,734...52,181,567
JBrowse link
G Hoxb8 homeobox B8 IAGP MGI PMID:11311170 NCBI chr11:96,170,227...96,176,151
Ensembl chr11:96,172,731...96,176,141
JBrowse link
G Hoxc8 homeobox C8 IAGP MGI PMID:11311170 NCBI chr15:102,898,971...102,902,707
Ensembl chr15:102,899,039...102,902,543
JBrowse link
G Hoxc9 homeobox C9 IAGP MGI PMID:7547473 NCBI chr15:102,885,467...102,893,324
Ensembl chr15:102,884,874...102,893,531
JBrowse link
G Hoxd3 homeobox D3 IAGP MGI PMID:7910549 NCBI chr 2:74,542,337...74,578,615
Ensembl chr 2:74,542,271...74,578,786
JBrowse link
G Hoxd8 homeobox D8 IAGP MGI PMID:11311170 NCBI chr 2:74,534,973...74,538,277
Ensembl chr 2:74,534,959...74,538,277
JBrowse link
G Impa1 inositol (myo)-1(or 4)-monophosphatase 1 IAGP MGI PMID:24554717 NCBI chr 3:10,377,016...10,396,499
Ensembl chr 3:10,377,016...10,396,499
JBrowse link
G Intu inturned planar cell polarity protein IAGP MGI PMID:25774014 NCBI chr 3:40,585,559...40,659,206
Ensembl chr 3:40,585,435...40,659,204
JBrowse link
G Map3k4 mitogen-activated protein kinase kinase kinase 4 IAGP MGI PMID:16199873 NCBI chr17:12,446,508...12,537,683
Ensembl chr17:12,446,508...12,537,683
JBrowse link
G Meox2 mesenchyme homeobox 2 IAGP MGI PMID:18378898 NCBI chr12:37,158,539...37,229,533
Ensembl chr12:37,158,539...37,229,533
JBrowse link
G Mllt3 myeloid/lymphoid or mixed-lineage leukemia; translocated to, 3 IAGP MGI PMID:12242306 NCBI chr 4:87,688,162...87,951,652
Ensembl chr 4:87,688,162...87,951,601
JBrowse link
G Myf5 myogenic factor 5 IAGP MGI PMID:18331721 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995
JBrowse link
G Pcgf2 polycomb group ring finger 2 IAGP MGI PMID:12183370 NCBI chr11:97,579,647...97,593,260
Ensembl chr11:97,579,649...97,591,323
JBrowse link
G Pcsk5 proprotein convertase subtilisin/kexin type 5 IAGP MGI PMID:18378898 NCBI chr19:17,409,678...17,815,076
Ensembl chr19:17,409,683...17,814,996
JBrowse link
G Phc2 polyhomeotic 2 IAGP MGI PMID:16024804 NCBI chr 4:128,548,448...128,646,674
Ensembl chr 4:128,548,495...128,646,674
JBrowse link
G Ptch1 patched 1 IAGP MGI PMID:23897749 NCBI chr13:63,656,142...63,721,274
Ensembl chr13:63,656,142...63,721,412
JBrowse link
G Rnf2 ring finger protein 2 IAGP MGI PMID:12183370 NCBI chr 1:151,345,159...151,376,562
Ensembl chr 1:151,333,755...151,376,706
JBrowse link
G Rpl38 ribosomal protein L38 IAGP MGI PMID:8995757 NCBI chr11:114,558,644...114,563,159
Ensembl chr11:114,559,350...114,563,157
JBrowse link
G Rps7 ribosomal protein S7 IAGP MGI PMID:23382688 NCBI chr12:28,680,846...28,685,952
Ensembl chr12:28,680,853...28,685,952
JBrowse link
G Schip1 schwannomin interacting protein 1 IAGP MGI PMID:17143286 NCBI chr 3:67,972,135...68,533,815
Ensembl chr 3:67,972,135...68,533,814
JBrowse link
G Sema3a sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A IAGP MGI PMID:8849723 NCBI chr 5:13,174,789...13,653,453
Ensembl chr 5:13,175,381...13,652,533
JBrowse link
G Sgpl1 sphingosine phosphate lyase 1 IAGP MGI PMID:17143286 NCBI chr10:60,934,421...60,983,463
Ensembl chr10:60,934,421...60,983,482
JBrowse link
G Smarcad1 SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 IAGP MGI PMID:10415348 NCBI chr 6:65,019,577...65,093,045
Ensembl chr 6:65,019,567...65,093,045
JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 IAGP MGI PMID:15254231 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573
JBrowse link
G Ssbp3 single-stranded DNA binding protein 3 IAGP MGI PMID:15857913 NCBI chr 4:106,768,667...106,906,891
Ensembl chr 4:106,767,898...106,906,891
JBrowse link
G Tiparp TCDD-inducible poly(ADP-ribose) polymerase IAGP MGI PMID:17143286 NCBI chr 3:65,435,868...65,462,939
Ensembl chr 3:65,435,831...65,462,939
JBrowse link
G Traf4 TNF receptor associated factor 4 IAGP MGI PMID:11943846 NCBI chr11:78,049,249...78,056,405
Ensembl chr11:78,049,325...78,056,415
JBrowse link
G Zfand5 zinc finger, AN1-type domain 5 IAGP MGI PMID:17143286 NCBI chr19:21,249,150...21,264,204
Ensembl chr19:21,249,642...21,264,204
JBrowse link
G Zfp640 zinc finger protein 640 IAGP MGI PMID:17143286 NCBI chr13:66,817,010...66,828,867
Ensembl chr13:66,817,992...66,821,393
JBrowse link
G Zfp950 zinc finger protein 950 IAGP MGI PMID:17143286 NCBI chr19:61,042,692...61,129,297
Ensembl chr19:61,042,278...61,129,278
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16725
    skeleton phenotype 3344
      abnormal skeleton morphology 3156
        abnormal joint morphology 487
          abnormal rib joint morphology 125
            abnormal sternocostal joint morphology 84
              abnormal first sternocostal joint morphology 0
              asymmetric sternocostal joints 46
Path 2
Term Annotations click to browse term
  mammalian phenotype 16725
    skeleton phenotype 3344
      abnormal skeleton morphology 3156
        abnormal axial skeleton morphology 1771
          abnormal thoracic cage morphology 550
            abnormal rib joint morphology 125
              abnormal sternocostal joint morphology 84
                abnormal first sternocostal joint morphology 0
                asymmetric sternocostal joints 46
paths to the root