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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:decreased CD4-positive, alpha-beta T cell number
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Accession:MP:0008075 term browser browse the term
Definition:reduced number of the subset of T lymphocytes that carry the CD4 marker, recognize intravesicular peptides bound to MHC class-II molecules, and turn on antibody production
Comment:Generally, when immunologists write CD8 positive T cell, what they mean is CD8-positive, alpha-beta T cell (CL:0000625). Similarly, when immunologists write CD4 positive T cell, what they mean is CD4-positive, alpha-beta T cell (CL:0000624). T cells bearing the alpha-beta T cell receptor are the most common in the body, and are the most commonly studied, so much so, that in many published papers, the authors do not even bother to specify (or assume) they are studying alpha-beta T cells and thus omit saying so.
Synonyms:exact_synonym: decreased CD4+ T cell number;   decreased CD4-positive T cell number;   reduced CD4+ T cell number



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decreased CD4-positive, alpha-beta T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 9430015G10Rik RIKEN cDNA 9430015G10 gene IEA MGI NCBI chr 4:156,194,455...156,211,720
Ensembl chr 4:156,194,439...156,211,722
JBrowse link
G Abcg8 ATP binding cassette subfamily G member 8 IEA MGI NCBI chr17:84,983,730...85,007,761
Ensembl chr17:84,983,730...85,007,761
JBrowse link
G Acp2 acid phosphatase 2, lysosomal IEA MGI NCBI chr 2:91,033,157...91,044,443
Ensembl chr 2:91,033,230...91,044,443
JBrowse link
G Adam10 a disintegrin and metallopeptidase domain 10 IAGP MGI PMID:18635581 PMID:22042698 NCBI chr 9:70,586,133...70,687,511
Ensembl chr 9:70,586,279...70,687,511
JBrowse link
G Aire autoimmune regulator IAGP MGI PMID:18414681 NCBI chr10:77,865,856...77,879,444
Ensembl chr10:77,865,856...77,879,444
JBrowse link
G Aldh2 aldehyde dehydrogenase 2, mitochondrial IEA MGI NCBI chr 5:121,704,090...121,731,887
Ensembl chr 5:121,704,090...121,731,887
JBrowse link
G Ap1g1 adaptor protein complex AP-1, gamma 1 subunit IAGP MGI PMID:10026148 NCBI chr 8:110,505,215...110,590,842
Ensembl chr 8:110,505,186...110,590,836
JBrowse link
G Apoe apolipoprotein E IAGP MGI PMID:17259598 PMID:19139386 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113
JBrowse link
G Arhgap45 Rho GTPase activating protein 45 IAGP MGI PMID:33719206 NCBI chr10:79,852,505...79,867,305
Ensembl chr10:79,852,487...79,867,306
JBrowse link
G Arhgef6 Rac/Cdc42 guanine nucleotide exchange factor 6 IAGP MGI PMID:18378701 NCBI chr  X:56,276,845...56,384,119
Ensembl chr  X:56,276,845...56,384,089
JBrowse link
G Arid3b AT-rich interaction domain 3B IAGP MGI PMID:27537840 NCBI chr 9:57,697,636...57,744,130
Ensembl chr 9:57,697,636...57,744,076
JBrowse link
G Arpc1b actin related protein 2/3 complex, subunit 1B IEA MGI NCBI chr 5:145,051,066...145,064,996
Ensembl chr 5:145,051,025...145,067,515
JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 IAGP MGI PMID:29908121 NCBI chr 8:41,793,683...41,850,681
Ensembl chr 8:41,793,234...41,827,810
JBrowse link
G Asxl1 ASXL transcriptional regulator 1 IAGP MGI PMID:19861679 NCBI chr 2:153,187,750...153,245,927
Ensembl chr 2:153,187,749...153,245,927
JBrowse link
G Atg3 autophagy related 3 IAGP MGI PMID:21421856 NCBI chr16:44,979,192...45,008,901
Ensembl chr16:44,979,148...45,008,901
JBrowse link
G Atg5 autophagy related 5 IAGP MGI PMID:23615463 NCBI chr10:44,144,325...44,240,295
Ensembl chr10:44,144,354...44,240,287
JBrowse link
G Atm ataxia telangiectasia mutated IAGP MGI PMID:8917548 PMID:15122331 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040
JBrowse link
G Atp6v0a2 ATPase, H+ transporting, lysosomal V0 subunit A2 IAGP MGI PMID:30237863 NCBI chr 5:124,767,117...124,801,519
Ensembl chr 5:124,766,641...124,801,519
JBrowse link
G B2m beta-2 microglobulin IAGP MGI PMID:20360383 NCBI chr 2:121,978,168...121,983,563
Ensembl chr 2:121,978,167...121,983,564
JBrowse link
G Bach2 BTB and CNC homology, basic leucine zipper transcription factor 2 IEA MGI NCBI chr 4:32,238,413...32,586,109
Ensembl chr 4:32,238,804...32,586,108
JBrowse link
G Batf basic leucine zipper transcription factor, ATF-like IAGP MGI PMID:20421391 NCBI chr12:85,733,494...85,755,861
Ensembl chr12:85,733,443...85,755,861
JBrowse link
G Bcl11b B cell leukemia/lymphoma 11B IAGP MGI PMID:17998389 PMID:23663453 NCBI chr12:107,876,662...107,970,404
Ensembl chr12:107,876,662...107,969,861
JBrowse link
G Bcl3 B cell leukemia/lymphoma 3 IEA MGI NCBI chr 7:19,542,387...19,556,691
Ensembl chr 7:19,542,387...19,556,695
JBrowse link
G Becn1 beclin 1, autophagy related IAGP MGI PMID:21660048 NCBI chr11:101,179,084...101,193,112
Ensembl chr11:101,176,778...101,193,112
JBrowse link
G Bmf BCL2 modifying factor IAGP MGI PMID:19841067 NCBI chr 2:118,359,238...118,385,240
Ensembl chr 2:118,359,238...118,380,168
JBrowse link
G Cadm1 cell adhesion molecule 1 IAGP MGI PMID:22084409 NCBI chr 9:47,441,468...47,773,578
Ensembl chr 9:47,441,471...47,769,413
JBrowse link
G Casp8 caspase 8 IAGP MGI PMID:12654726 NCBI chr 1:58,834,553...58,886,663
Ensembl chr 1:58,834,533...58,886,662
JBrowse link
G Cbfb core binding factor beta IAGP MGI PMID:18776905 PMID:20360383 NCBI chr 8:105,897,306...105,944,621
Ensembl chr 8:105,897,306...105,944,621
JBrowse link
G Ccl5 C-C motif chemokine ligand 5 IAGP MGI PMID:11890717 NCBI chr11:83,416,604...83,421,344
Ensembl chr11:83,416,604...83,421,344
JBrowse link
G Ccr1 C-C motif chemokine receptor 1 IAGP MGI PMID:15593301 NCBI chr 9:123,762,163...123,768,729
Ensembl chr 9:123,762,161...123,768,729
JBrowse link
G Ccr2 C-C motif chemokine receptor 2 IAGP MGI PMID:10843684 NCBI chr 9:123,901,954...123,913,594
Ensembl chr 9:123,901,987...123,913,594
JBrowse link
G Ccr6 C-C motif chemokine receptor 6 IAGP MGI PMID:19305396 NCBI chr17:8,454,875...8,477,353
Ensembl chr17:8,454,875...8,475,973
JBrowse link
G Ccr7 C-C motif chemokine receptor 7 IAGP MGI PMID:10520991 NCBI chr11:99,035,025...99,045,903
Ensembl chr11:99,035,022...99,045,903
JBrowse link
G Cd247 CD247 antigen IAGP MGI PMID:7688481 PMID:8223444 PMID:8223445 PMID:8223495 PMID:22945921 NCBI chr 1:165,607,514...165,698,722
Ensembl chr 1:165,616,250...165,704,846
JBrowse link
G Cd28 CD28 antigen IAGP MGI PMID:11285307 NCBI chr 1:60,785,547...60,812,521
Ensembl chr 1:60,755,959...60,812,518
JBrowse link
G Cd38 CD38 antigen IEA MGI NCBI chr 5:44,026,153...44,069,714
Ensembl chr 5:44,025,895...44,069,717
JBrowse link
G Cd3d CD3 antigen, delta polypeptide IAGP MGI PMID:9135151 NCBI chr 9:44,893,067...44,898,350
Ensembl chr 9:44,893,084...44,898,637
JBrowse link
G Cd3e CD3 antigen, epsilon polypeptide IEA MGI NCBI chr 9:44,910,033...44,920,961
Ensembl chr 9:44,910,038...44,920,925
JBrowse link
G Cd4 CD4 antigen IAGP MGI PMID:9551897 PMID:11748274 PMID:14688093 PMID:20360383 NCBI chr 6:124,841,656...124,865,210
Ensembl chr 6:124,841,655...124,865,184
JBrowse link
G Cd44 CD44 antigen IEA MGI NCBI chr 2:102,641,486...102,732,014
Ensembl chr 2:102,641,486...102,732,010
JBrowse link
G Cd47 CD47 antigen (Rh-related antigen, integrin-associated signal transducer) IAGP MGI PMID:24021673 NCBI chr16:49,671,691...49,732,799
Ensembl chr16:49,620,896...49,735,373
JBrowse link
G Cd5 CD5 antigen IAGP MGI PMID:22904299 NCBI chr19:10,695,471...10,716,390
Ensembl chr19:10,694,480...10,716,366
JBrowse link
G Cd69 CD69 antigen IAGP MGI PMID:22474373 NCBI chr 6:129,244,287...129,252,332
Ensembl chr 6:129,244,288...129,252,399
JBrowse link
G Cd74 CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated) IAGP MGI PMID:7553002 PMID:7679955 PMID:8098731 PMID:8810244 PMID:9256469 More... NCBI chr18:60,936,921...60,945,724
Ensembl chr18:60,936,920...60,945,724
JBrowse link
G Cd83 CD83 antigen IAGP MGI PMID:11955430 PMID:27503071 NCBI chr13:43,938,661...43,956,608
Ensembl chr13:43,938,251...43,956,608
JBrowse link
G Cd84 CD84 antigen IAGP MGI PMID:20153220 NCBI chr 1:171,667,261...171,718,288
Ensembl chr 1:171,667,265...171,718,285
JBrowse link
G Cd8a CD8 subunit alpha IAGP MGI PMID:17082573 NCBI chr 6:71,350,411...71,356,155
Ensembl chr 6:71,350,411...71,356,157
JBrowse link
G Cd8b1 CD8 subunit beta 1 IAGP MGI PMID:17082573 NCBI chr 6:71,299,772...71,314,476
Ensembl chr 6:71,299,772...71,314,478
JBrowse link
G Ciita class II transactivator IAGP MGI PMID:8624807 PMID:9885917 PMID:10201997 PMID:10452977 PMID:15322541 NCBI chr16:10,297,877...10,348,928
Ensembl chr16:10,297,923...10,346,282
JBrowse link
G Commd10 COMM domain containing 10 IAGP MGI PMID:25552701 PMID:30237863 PMID:32704094 NCBI chr18:47,091,917...47,242,435
Ensembl chr18:47,091,883...47,367,351
JBrowse link
G Coro1a coronin, actin binding protein 1A IAGP MGI PMID:16902139 PMID:18345003 PMID:18836449 NCBI chr 7:126,298,946...126,303,925
Ensembl chr 7:126,298,945...126,306,959
JBrowse link
G Cr1l complement C3b/C4b receptor 1 like IAGP MGI PMID:19136662 NCBI chr 1:194,781,019...194,813,878
Ensembl chr 1:194,779,690...194,813,894
JBrowse link
G Crebbp CREB binding protein IAGP MGI PMID:16428436 NCBI chr16:3,899,198...4,031,864
Ensembl chr16:3,899,192...4,031,861
JBrowse link
G Ctcf CCCTC-binding factor IAGP MGI PMID:18923423 NCBI chr 8:106,351,135...106,409,554
Ensembl chr 8:106,363,200...106,409,554
JBrowse link
G Ctla4 cytotoxic T-lymphocyte-associated protein 4 IAGP MGI PMID:11285307 NCBI chr 1:60,948,184...60,954,991
Ensembl chr 1:60,926,159...60,954,991
JBrowse link
G Ctsl cathepsin L IAGP MGI PMID:10199917 PMID:15905545 PMID:19664906 PMID:25222295 NCBI chr13:64,509,704...64,518,586
Ensembl chr13:64,507,151...64,518,704
JBrowse link
G Cxcl10 C-X-C motif chemokine ligand 10 IAGP MGI PMID:19139386 NCBI chr 5:92,494,497...92,496,748
Ensembl chr 5:92,494,497...92,496,748
JBrowse link
G Cxcr4 C-X-C motif chemokine receptor 4 IAGP MGI PMID:25016030 NCBI chr 1:128,515,936...128,520,036
Ensembl chr 1:128,515,936...128,520,030
JBrowse link
G Cyld CYLD lysine 63 deubiquitinase IAGP MGI PMID:16501569 NCBI chr 8:89,423,506...89,478,574
Ensembl chr 8:89,423,675...89,478,573
JBrowse link
G D6Wsu163e DNA segment, Chr 6, Wayne State University 163, expressed IEA MGI NCBI chr 6:126,916,938...126,952,667
Ensembl chr 6:126,916,925...126,952,930
JBrowse link
G Dck deoxycytidine kinase IAGP MGI PMID:22407915 NCBI chr 5:88,912,872...88,931,136
Ensembl chr 5:88,912,855...88,931,140
JBrowse link
G Dclre1c DNA cross-link repair 1C IAGP MGI PMID:19349461 PMID:19692705 NCBI chr 2:3,425,112...3,475,248
Ensembl chr 2:3,425,168...3,465,167
JBrowse link
G Dgkz diacylglycerol kinase zeta IAGP MGI PMID:12883552 NCBI chr 2:91,763,167...91,806,788
Ensembl chr 2:91,763,169...91,806,209
JBrowse link
G Dhx15 DEAH-box helicase 15 IAGP MGI PMID:31921164 NCBI chr 5:52,307,545...52,347,888
Ensembl chr 5:52,307,545...52,347,856
JBrowse link
G Diaph1 diaphanous related formin 1 IAGP MGI PMID:17682067 NCBI chr18:37,976,654...38,068,573
Ensembl chr18:37,976,654...38,068,529
JBrowse link
G Dicer1 dicer 1, ribonuclease type III IAGP MGI PMID:22179202 NCBI chr12:104,654,001...104,718,331
Ensembl chr12:104,654,001...104,718,211
JBrowse link
G Dll1 delta like canonical Notch ligand 1 IAGP MGI PMID:19562077 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134
JBrowse link
G Dll4 delta like canonical Notch ligand 4 IAGP MGI PMID:18824585 NCBI chr 2:119,156,286...119,166,145
Ensembl chr 2:119,156,265...119,166,443
JBrowse link
G Dock2 dedicator of cyto-kinesis 2 IEA MGI NCBI chr11:34,176,815...34,674,732
Ensembl chr11:34,176,815...34,674,719
JBrowse link
G Dock8 dedicator of cytokinesis 8 IAGP MGI PMID:22461490 NCBI chr19:24,976,753...25,179,796
Ensembl chr19:24,976,898...25,179,796
JBrowse link
G Efnb1 ephrin B1 IAGP MGI PMID:21976681 NCBI chr  X:98,179,667...98,192,628
Ensembl chr  X:98,179,736...98,192,597
JBrowse link
G Efnb2 ephrin B2 IAGP MGI PMID:21976681 NCBI chr 8:8,667,235...8,711,242
Ensembl chr 8:8,667,434...8,711,242
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 IAGP MGI PMID:19454673 NCBI chr 8:4,334,781...4,375,104
Ensembl chr 8:4,335,382...4,375,413
JBrowse link
G Elk4 ELK4, member of ETS oncogene family IAGP MGI PMID:14770179 NCBI chr 1:131,935,129...131,954,186
Ensembl chr 1:131,935,345...131,960,350
JBrowse link
G Elmo1 engulfment and cell motility 1 IEA MGI NCBI chr13:20,274,677...20,792,523
Ensembl chr13:20,274,766...20,792,523
JBrowse link
G Eomes eomesodermin IAGP MGI PMID:20713880 NCBI chr 9:118,307,259...118,315,176
Ensembl chr 9:118,307,280...118,315,200
JBrowse link
G Esr1 estrogen receptor 1 (alpha) IAGP MGI PMID:11380688 NCBI chr10:4,561,989...4,955,633
Ensembl chr10:4,561,593...4,955,614
JBrowse link
G Esr2 estrogen receptor 2 (beta) IAGP MGI PMID:11380688 NCBI chr12:76,167,193...76,224,033
Ensembl chr12:76,167,193...76,224,033
JBrowse link
G Ess2 ess-2 splicing factor IAGP MGI PMID:35933014 NCBI chr16:17,718,573...17,729,225
Ensembl chr16:17,718,573...17,729,212
JBrowse link
G Ets1 E26 avian leukemia oncogene 1, 5' domain IAGP MGI PMID:16818745 PMID:17339335 NCBI chr 9:32,547,501...32,669,116
Ensembl chr 9:32,547,517...32,669,116
JBrowse link
G Fadd Fas associated via death domain IAGP MGI PMID:11353862 NCBI chr 7:144,132,060...144,136,178
Ensembl chr 7:144,131,055...144,136,200
JBrowse link
G Fas Fas cell surface death receptor IAGP MGI PMID:16339515 PMID:17259598 PMID:18492657 NCBI chr19:34,267,926...34,305,175
Ensembl chr19:34,268,066...34,305,172
JBrowse link
G Fbxo7 F-box protein 7 IAGP MGI PMID:30840666 NCBI chr10:85,856,313...85,887,737
Ensembl chr10:85,857,836...85,887,737
JBrowse link
G Foxn1 forkhead box N1 IAGP MGI PMID:14528302 PMID:18824585 PMID:22179202 NCBI chr11:78,248,403...78,277,597
Ensembl chr11:78,248,403...78,277,384
JBrowse link
G Foxp1 forkhead box P1 IAGP MGI PMID:19965654 NCBI chr 6:98,902,303...99,510,587
Ensembl chr 6:98,902,299...99,499,682
JBrowse link
G Foxp3 forkhead box P3 IAGP MGI PMID:24135136 PMID:24164480 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484
JBrowse link
G Gata3 GATA binding protein 3 IAGP MGI PMID:14670303 PMID:18776904 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845
JBrowse link
G Gimap1 GTPase, IMAP family member 1 IAGP MGI PMID:20194894 NCBI chr 6:48,715,981...48,720,729
Ensembl chr 6:48,715,988...48,720,729
JBrowse link
G Gimap5 GTPase, IMAP family member 5 IAGP MGI PMID:18796632 NCBI chr 6:48,723,131...48,731,134
Ensembl chr 6:48,723,131...48,731,144
JBrowse link
G Git2 GIT ArfGAP 2 IAGP MGI PMID:20431621 NCBI chr 5:114,865,469...114,912,647
Ensembl chr 5:114,865,468...114,913,578
JBrowse link
G Gmds GDP-mannose 4, 6-dehydratase IEA MGI NCBI chr13:32,003,566...32,522,744
Ensembl chr13:32,003,562...32,522,723
JBrowse link
G Gmnn geminin IAGP MGI PMID:20107189 NCBI chr13:24,935,828...24,954,222
Ensembl chr13:24,935,828...24,945,906
JBrowse link
G Gper1 G protein-coupled estrogen receptor 1 IAGP MGI PMID:19095739 NCBI chr 5:139,408,905...139,413,555
Ensembl chr 5:139,408,906...139,413,555
JBrowse link
G Gpr15 G protein-coupled receptor 15 IAGP MGI PMID:23661644 NCBI chr16:58,537,006...58,539,235
Ensembl chr16:58,537,796...58,539,433
JBrowse link
G Gpr83 G protein-coupled receptor 83 IAGP MGI PMID:18479351 NCBI chr 9:14,771,038...14,782,085
Ensembl chr 9:14,771,506...14,782,085
JBrowse link
G Grap2 GRB2-related adaptor protein 2 IAGP MGI PMID:11239162 PMID:19401562 NCBI chr15:80,456,798...80,537,055
Ensembl chr15:80,456,795...80,537,055
JBrowse link
G Grb2 growth factor receptor bound protein 2 IAGP MGI PMID:20498059 NCBI chr11:115,534,871...115,599,423
Ensembl chr11:115,534,871...115,599,423
JBrowse link
G Grk2 G protein-coupled receptor kinase 2 IAGP MGI PMID:21960637 NCBI chr19:4,336,029...4,356,356
Ensembl chr19:4,336,029...4,356,250
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:17923094 PMID:18354198 PMID:20123962 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G H2-Aa histocompatibility 2, class II antigen A, alpha IAGP MGI PMID:8398989 NCBI chr17:34,501,718...34,506,797
Ensembl chr17:34,501,718...34,506,797
JBrowse link
G H2-Ab1 histocompatibility 2, class II antigen A, beta 1 IAGP MGI PMID:1909605 PMID:1910207 PMID:7547694 PMID:9491996 PMID:9885917 More... NCBI chr17:34,482,201...34,488,392
Ensembl chr17:34,476,663...34,488,393
JBrowse link
G H2-D1 histocompatibility 2, D region locus 1 IAGP MGI PMID:29472249 NCBI chr17:35,482,070...35,486,473
Ensembl chr17:35,481,706...35,486,475
JBrowse link
G H2-DMa histocompatibility 2, class II, locus DMa IAGP MGI PMID:8598041 PMID:8638109 PMID:9256469 PMID:9551884 PMID:11290790 More... NCBI chr17:34,338,667...34,358,075
Ensembl chr17:34,338,515...34,358,075
JBrowse link
G Hax1 HCLS1 associated X-1 IAGP MGI PMID:20865787 NCBI chr 3:89,902,753...89,906,023
Ensembl chr 3:89,902,753...89,906,087
JBrowse link
G Hdac1 histone deacetylase 1 IAGP MGI PMID:23287868 NCBI chr 4:129,409,897...129,436,516
Ensembl chr 4:129,409,897...129,436,506
JBrowse link
G Hdac2 histone deacetylase 2 IAGP MGI PMID:23287868 NCBI chr10:36,850,293...36,877,885
Ensembl chr10:36,850,540...36,877,885
JBrowse link
G Hnrnpl heterogeneous nuclear ribonucleoprotein L IAGP MGI PMID:22523384 NCBI chr 7:28,507,971...28,521,693
Ensembl chr 7:28,507,966...28,521,691
JBrowse link
G Hnrnpll heterogeneous nuclear ribonucleoprotein L-like IAGP MGI PMID:19100700 NCBI chr17:80,336,916...80,369,697
Ensembl chr17:80,336,916...80,369,697
JBrowse link
G Icos inducible T cell co-stimulator IAGP MGI PMID:19915142 NCBI chr 1:60,999,909...61,039,481
Ensembl chr 1:61,017,086...61,039,479
JBrowse link
G Id3 inhibitor of DNA binding 3 IAGP MGI PMID:20932862 NCBI chr 4:135,871,133...135,872,703
Ensembl chr 4:135,870,808...135,873,066
JBrowse link
G Idh1 isocitrate dehydrogenase 1 (NADP+), soluble IAGP MGI PMID:22763442 NCBI chr 1:65,197,775...65,225,638
Ensembl chr 1:65,197,775...65,225,659
JBrowse link
G Ifngr1 interferon gamma receptor 1 IAGP MGI PMID:18552211 NCBI chr10:19,467,697...19,485,977
Ensembl chr10:19,467,697...19,485,977
JBrowse link
G Ighm immunoglobulin heavy constant mu IAGP MGI PMID:11067910 PMID:11733579 NCBI chr12:113,382,446...113,386,350
Ensembl chr12:113,382,178...113,386,350
JBrowse link
G Ikbkb inhibitor of kappaB kinase beta IAGP MGI PMID:14499113 PMID:30337470 NCBI chr 8:23,149,228...23,196,605
Ensembl chr 8:23,149,228...23,196,605
JBrowse link
G Ikbkg inhibitor of kappaB kinase gamma IAGP MGI PMID:14499113 NCBI chr  X:73,436,883...73,498,013
Ensembl chr  X:73,436,896...73,497,460
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 IEA MGI NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926
JBrowse link
G Il17a interleukin 17A IAGP MGI PMID:18411338 NCBI chr 1:20,801,129...20,804,720
Ensembl chr 1:20,801,129...20,804,720
JBrowse link
G Il17c interleukin 17C IAGP MGI PMID:21982598 NCBI chr 8:123,147,912...123,150,820
Ensembl chr 8:123,148,759...123,150,378
JBrowse link
G Il21 interleukin 21 IAGP MGI PMID:17581589 NCBI chr 3:37,276,908...37,286,785
Ensembl chr 3:37,276,908...37,286,785
JBrowse link
G Il21r interleukin 21 receptor IAGP MGI PMID:17581588 NCBI chr 7:125,202,424...125,232,742
Ensembl chr 7:125,202,601...125,232,742
JBrowse link
G Il2rb interleukin 2 receptor, beta chain IEA MGI NCBI chr15:78,363,456...78,396,569
Ensembl chr15:78,363,456...78,379,471
JBrowse link
G Il2rg interleukin 2 receptor, gamma chain IAGP MGI PMID:15879151 PMID:19528538 PMID:23109710 PMID:24021673 NCBI chr  X:100,307,991...100,311,861
Ensembl chr  X:100,307,984...100,311,861
JBrowse link
G Il36g interleukin 36G IAGP MGI PMID:28327619 NCBI chr 2:24,076,488...24,083,579
Ensembl chr 2:24,076,488...24,083,580
JBrowse link
G Il5ra interleukin 5 receptor, alpha IAGP MGI PMID:8630733 NCBI chr 6:106,687,336...106,725,998
Ensembl chr 6:106,687,318...106,725,998
JBrowse link
G Il7r interleukin 7 receptor IAGP MGI PMID:17325202 NCBI chr15:9,505,880...9,530,270
Ensembl chr15:9,505,874...9,530,262
JBrowse link
G Inpp5d inositol polyphosphate-5-phosphatase D IEA MGI NCBI chr 1:87,548,034...87,648,232
Ensembl chr 1:87,548,034...87,648,229
JBrowse link
G Itch itchy, E3 ubiquitin protein ligase IAGP MGI PMID:24135136 NCBI chr 2:154,975,401...155,068,775
Ensembl chr 2:154,975,429...155,068,775
JBrowse link
G Itga4 integrin alpha 4 IAGP MGI PMID:14645544 NCBI chr 2:79,084,767...79,163,458
Ensembl chr 2:79,085,770...79,163,467
JBrowse link
G Itgad integrin, alpha D IAGP MGI PMID:15210787 NCBI chr 7:127,773,105...127,822,988
Ensembl chr 7:127,753,548...127,822,988
JBrowse link
G Itgal integrin alpha L IAGP MGI PMID:10224287 NCBI chr 7:126,895,404...126,934,309
Ensembl chr 7:126,895,432...126,934,310
JBrowse link
G Itgam integrin alpha M IAGP MGI PMID:15210787 NCBI chr 7:127,661,812...127,717,663
Ensembl chr 7:127,661,812...127,717,663
JBrowse link
G Itgb2 integrin beta 2 IAGP MGI PMID:17119112 NCBI chr10:77,366,164...77,401,542
Ensembl chr10:77,366,086...77,401,542
JBrowse link
G Itgb7 integrin beta 7 IAGP MGI PMID:8684468 NCBI chr15:102,124,429...102,141,840
Ensembl chr15:102,124,430...102,140,379
JBrowse link
G Itk IL2 inducible T cell kinase IAGP MGI PMID:8777721 PMID:9584150 PMID:10213685 PMID:12055226 PMID:19009524 NCBI chr11:46,215,975...46,280,342
Ensembl chr11:46,215,977...46,280,342
JBrowse link
G Jak2 Janus kinase 2 IAGP MGI PMID:25552701 NCBI chr19:29,229,006...29,290,495
Ensembl chr19:29,229,228...29,290,480
JBrowse link
G Jak3 Janus kinase 3 IAGP MGI PMID:16020505 NCBI chr 8:72,129,027...72,143,221
Ensembl chr 8:72,128,940...72,143,219
JBrowse link
G Kdelr1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 IAGP MGI PMID:26438836 NCBI chr 7:45,522,264...45,533,150
Ensembl chr 7:45,522,196...45,533,156
JBrowse link
G Krtap8-1 keratin associated protein 8-1 IEA MGI NCBI chr16:89,284,262...89,284,840
Ensembl chr16:89,284,267...89,284,840
JBrowse link
G Lair1 leukocyte-associated Ig-like receptor 1 IAGP MGI PMID:22156345 NCBI chr 7:4,010,072...4,076,566
Ensembl chr 7:4,006,401...4,066,178
JBrowse link
G Lat linker for activation of T cells IAGP MGI PMID:19380807 NCBI chr 7:125,962,999...125,968,877
Ensembl chr 7:125,962,996...125,968,742
JBrowse link
G Lbr lamin B receptor IAGP MGI PMID:22105998 NCBI chr 1:181,642,880...181,669,933
Ensembl chr 1:181,642,900...181,670,611
JBrowse link
G Lcp2 lymphocyte cytosolic protein 2 IAGP MGI PMID:16186188 PMID:19401562 NCBI chr11:33,996,928...34,042,281
Ensembl chr11:33,996,920...34,042,295
JBrowse link
G Lep leptin IAGP MGI PMID:20068132 NCBI chr 6:29,060,220...29,073,875
Ensembl chr 6:29,060,219...29,073,876
JBrowse link
G Lepr leptin receptor IAGP MGI PMID:20068132 NCBI chr 4:101,574,393...101,676,375
Ensembl chr 4:101,574,601...101,672,549
JBrowse link
G Lig4 ligase IV, DNA, ATP-dependent IAGP MGI PMID:20133615 NCBI chr 8:10,020,020...10,027,680
Ensembl chr 8:10,019,049...10,027,686
JBrowse link
G Lmbr1l limb region 1 like IAGP MGI PMID:31073040 NCBI chr15:98,801,798...98,815,944
Ensembl chr15:98,801,798...98,816,112
JBrowse link
G Lrrc8a leucine rich repeat containing 8A VRAC subunit A IAGP MGI PMID:24752297 NCBI chr 2:30,127,781...30,153,802
Ensembl chr 2:30,127,727...30,153,802
JBrowse link
G Ltbr lymphotoxin B receptor IEA MGI NCBI chr 6:125,283,534...125,291,026
Ensembl chr 6:125,283,534...125,290,848
JBrowse link
G Ly6e lymphocyte antigen 6 family member E IAGP MGI PMID:32704094 NCBI chr15:74,826,874...74,831,753
Ensembl chr15:74,826,900...74,831,752
JBrowse link
G Lyg1 lysozyme G-like 1 IAGP MGI PMID:28507796 NCBI chr 1:37,985,819...37,996,840
Ensembl chr 1:37,985,817...37,996,840
JBrowse link
G Lyst lysosomal trafficking regulator IAGP MGI PMID:8806787 NCBI chr13:13,764,896...13,953,388
Ensembl chr13:13,764,982...13,953,388
JBrowse link
G Lyz2 lysozyme 2 IAGP MGI PMID:22763442 NCBI chr10:117,113,446...117,118,177
Ensembl chr10:117,113,236...117,118,226
JBrowse link
G Map3k3 mitogen-activated protein kinase kinase kinase 3 IAGP MGI PMID:19223432 PMID:19265138 NCBI chr11:105,975,358...106,047,482
Ensembl chr11:105,975,439...106,046,272
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 IAGP MGI PMID:16857737 PMID:16940043 NCBI chr 4:31,963,659...32,023,470
Ensembl chr 4:31,964,097...32,023,467
JBrowse link
G Mapk1 mitogen-activated protein kinase 1 IAGP MGI PMID:16226508 NCBI chr16:16,801,246...16,865,317
Ensembl chr16:16,801,246...16,865,317
JBrowse link
G Marchf1 membrane associated ring-CH-type finger 1 IAGP MGI PMID:27503071 NCBI chr 8:66,070,558...66,925,761
Ensembl chr 8:66,070,552...66,924,289
JBrowse link
G Mavs mitochondrial antiviral signaling protein IAGP MGI PMID:20140199 NCBI chr 2:131,075,445...131,089,945
Ensembl chr 2:131,075,983...131,089,945
JBrowse link
G Mcl1 myeloid cell leukemia sequence 1 IAGP MGI PMID:18566418 PMID:19234191 NCBI chr 3:95,564,017...95,583,553
Ensembl chr 3:95,566,099...95,570,487
JBrowse link
G Mgl2 macrophage galactose N-acetyl-galactosamine specific lectin 2 IAGP MGI PMID:24076051 NCBI chr11:70,020,953...70,028,368
Ensembl chr11:70,021,155...70,028,376
JBrowse link
G Mmp19 matrix metallopeptidase 19 IAGP MGI PMID:18523579 NCBI chr10:128,626,779...128,636,696
Ensembl chr10:128,626,779...128,636,693
JBrowse link
G Msi2 musashi RNA-binding protein 2 IAGP MGI PMID:21613258 NCBI chr11:88,230,208...88,609,197
Ensembl chr11:88,230,208...88,609,339
JBrowse link
G Msn moesin IAGP MGI PMID:22875842 NCBI chr  X:95,139,651...95,212,159
Ensembl chr  X:95,139,648...95,212,158
JBrowse link
G Mtor mechanistic target of rapamycin kinase IAGP MGI PMID:24336796 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140
JBrowse link
G Nbn nibrin IAGP MGI PMID:11889050 NCBI chr 4:15,955,388...15,992,589
Ensembl chr 4:15,957,925...15,992,589
JBrowse link
G Nckap1l NCK associated protein 1 like IAGP MGI PMID:19015308 NCBI chr15:103,362,219...103,411,288
Ensembl chr15:103,362,221...103,407,237
JBrowse link
G Ncr1 natural cytotoxicity triggering receptor 1 IAGP MGI PMID:22267813 NCBI chr 7:4,340,714...4,348,183
Ensembl chr 7:4,340,723...4,348,163
JBrowse link
G Nfatc3 nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 3 IAGP MGI PMID:17579027 NCBI chr 8:106,785,450...106,857,169
Ensembl chr 8:106,785,472...106,857,169
JBrowse link
G Nfe2l2 nuclear factor, erythroid derived 2, like 2 IAGP MGI PMID:11576348 NCBI chr 2:75,505,860...75,535,007
Ensembl chr 2:75,505,857...75,534,985
JBrowse link
G Nfkb1 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 IAGP MGI PMID:9407039 NCBI chr 3:135,290,416...135,397,422
Ensembl chr 3:135,290,416...135,397,308
JBrowse link
G Nfkb2 nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100 IAGP MGI PMID:9407039 NCBI chr19:46,285,478...46,300,839
Ensembl chr19:46,292,759...46,300,824
JBrowse link
G Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha IAGP MGI PMID:20696914 NCBI chr12:55,536,194...55,539,432
Ensembl chr12:55,536,195...55,539,432
JBrowse link
G Nkap NFKB activating protein IAGP MGI PMID:19409814 NCBI chr  X:36,390,416...36,414,399
Ensembl chr  X:36,390,448...36,414,399
JBrowse link
G Nkg7 natural killer cell group 7 sequence IAGP MGI PMID:32839608 NCBI chr 7:43,086,562...43,087,670
Ensembl chr 7:43,086,497...43,087,673
JBrowse link
G Nkx2-3 NK2 homeobox 3 IAGP MGI PMID:10926756 NCBI chr19:43,600,764...43,604,331
Ensembl chr19:43,600,764...43,604,331
JBrowse link
G Notch1 notch 1 IAGP MGI PMID:10367900 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675
JBrowse link
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IAGP MGI PMID:19017639 PMID:22653054 NCBI chr18:39,543,598...39,652,485
Ensembl chr18:39,543,598...39,652,474
JBrowse link
G Nrbp1 nuclear receptor binding protein 1 IEA MGI NCBI chr 5:31,398,227...31,408,910
Ensembl chr 5:31,398,208...31,408,910
JBrowse link
G Nsrp1 nuclear speckle regulatory protein 1 IAGP MGI PMID:34037780 NCBI chr11:76,935,118...76,969,263
Ensembl chr11:76,935,118...76,969,261
JBrowse link
G Nub1 negative regulator of ubiquitin-like proteins 1 IEA MGI NCBI chr 5:24,890,813...24,915,376
Ensembl chr 5:24,890,530...24,915,376
JBrowse link
G Nup210 nucleoporin 210 IAGP MGI PMID:29736031 PMID:30323813 NCBI chr 6:90,990,049...91,095,920
Ensembl chr 6:90,990,050...91,093,811
JBrowse link
G Nup98 nucleoporin 98 IAGP MGI PMID:16546098 NCBI chr 7:101,768,607...101,859,359
Ensembl chr 7:101,768,605...101,859,383
JBrowse link
G Ogt O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) IAGP MGI PMID:14749383 NCBI chr  X:100,683,617...100,727,957
Ensembl chr  X:100,683,666...100,727,957
JBrowse link
G Pax1 paired box 1 IAGP MGI PMID:16093716 NCBI chr 2:147,203,850...147,216,972
Ensembl chr 2:147,203,845...147,235,215
JBrowse link
G Paxx non-homologous end joining factor IAGP MGI PMID:27798842 NCBI chr 2:25,345,132...25,352,666
Ensembl chr 2:25,345,153...25,351,106
JBrowse link
G Pbx1 pre B cell leukemia homeobox 1 IAGP MGI PMID:17244677 NCBI chr 1:167,946,933...168,259,898
Ensembl chr 1:167,946,933...168,259,839
JBrowse link
G Pgam1 phosphoglycerate mutase 1 IAGP MGI PMID:32709928 NCBI chr19:41,900,310...41,907,104
Ensembl chr19:41,900,362...41,907,099
JBrowse link
G Pgd phosphogluconate dehydrogenase IAGP MGI PMID:33691103 NCBI chr 4:149,234,448...149,251,162
Ensembl chr 4:149,234,448...149,251,228
JBrowse link
G Phf6 PHD finger protein 6 IAGP MGI PMID:31395598 NCBI chr  X:52,001,091...52,045,838
Ensembl chr  X:52,001,143...52,045,820
JBrowse link
G Picalm phosphatidylinositol binding clathrin assembly protein IAGP MGI PMID:25552701 NCBI chr 7:89,778,711...89,858,655
Ensembl chr 7:89,779,421...89,862,673
JBrowse link
G Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 IAGP MGI PMID:22592798 NCBI chr18:30,390,441...30,481,179
Ensembl chr18:30,405,800...30,481,179
JBrowse link
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta IAGP MGI PMID:16304053 PMID:20826752 NCBI chr 4:149,733,625...149,787,023
Ensembl chr 4:149,733,625...149,787,028
JBrowse link
G Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma IAGP MGI PMID:10669416 PMID:16304053 NCBI chr12:32,223,128...32,258,675
Ensembl chr12:32,223,472...32,258,658
JBrowse link
G Pla2g10 phospholipase A2, group X IAGP MGI PMID:17403936 NCBI chr16:13,532,921...13,548,863
Ensembl chr16:13,532,921...13,548,847
JBrowse link
G Plcg1 phospholipase C, gamma 1 IAGP MGI PMID:20123962 NCBI chr 2:160,573,230...160,617,680
Ensembl chr 2:160,573,220...160,617,680
JBrowse link
G Pnp purine-nucleoside phosphorylase IAGP MGI PMID:10859343 NCBI chr14:51,181,760...51,190,869
Ensembl chr14:51,168,539...51,190,869
JBrowse link
G Ppp3cb protein phosphatase 3, catalytic subunit, beta isoform IEA MGI NCBI chr14:20,549,432...20,596,641
Ensembl chr14:20,549,432...20,596,641
JBrowse link
G Ppp4c protein phosphatase 4, catalytic subunit IAGP MGI PMID:17060460 NCBI chr 7:126,385,038...126,391,729
Ensembl chr 7:126,385,038...126,391,668
JBrowse link
G Prdm11 PR domain containing 11 IAGP MGI PMID:26263558 NCBI chr 2:92,795,496...92,876,825
Ensembl chr 2:92,802,363...92,876,512
JBrowse link
G Prf1 perforin 1 (pore forming protein) IAGP MGI PMID:14557749 NCBI chr10:61,133,530...61,140,463
Ensembl chr10:61,133,612...61,140,459
JBrowse link
G Prkch protein kinase C, eta IAGP MGI PMID:22155788 NCBI chr12:73,631,570...73,824,959
Ensembl chr12:73,631,570...73,824,959
JBrowse link
G Prkcq protein kinase C, theta IAGP MGI PMID:22155788 NCBI chr 2:11,176,922...11,306,033
Ensembl chr 2:11,176,919...11,306,033
JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide IAGP MGI PMID:7995938 PMID:8806787 PMID:15879151 PMID:21482716 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099
JBrowse link
G Prnp prion protein IAGP MGI PMID:16517717 NCBI chr 2:131,751,848...131,780,356
Ensembl chr 2:131,751,848...131,780,349
JBrowse link
G Prr7 proline rich 7 (synaptic) IAGP MGI PMID:27657535 NCBI chr13:55,612,080...55,620,968
Ensembl chr13:55,612,080...55,620,967
JBrowse link
G Prss16 serine protease 16 (thymus) IAGP MGI PMID:19283781 NCBI chr13:22,186,346...22,193,911
Ensembl chr13:22,186,343...22,193,912
JBrowse link
G Psmb10 proteasome (prosome, macropain) subunit, beta type 10 IAGP MGI PMID:29654304 NCBI chr 8:106,662,360...106,665,024
Ensembl chr 8:106,662,367...106,665,076
JBrowse link
G Ptpn2 protein tyrosine phosphatase, non-receptor type 2 IAGP MGI PMID:22590589 NCBI chr18:67,798,571...67,857,697
Ensembl chr18:67,798,581...67,857,665
JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C IAGP MGI PMID:8334701 PMID:8666928 PMID:10508267 PMID:20346773 NCBI chr 1:137,990,601...138,103,491
Ensembl chr 1:137,990,599...138,103,446
JBrowse link
G Rab7 RAB7, member RAS oncogene family IAGP MGI PMID:23615463 NCBI chr 6:87,976,088...88,022,252
Ensembl chr 6:87,976,088...88,022,252
JBrowse link
G Rac2 Rac family small GTPase 2 IAGP MGI PMID:30723080 NCBI chr15:78,443,369...78,456,983
Ensembl chr15:78,443,367...78,456,983
JBrowse link
G Rad21 RAD21 cohesin complex component IAGP MGI PMID:21832993 NCBI chr15:51,826,000...51,856,934
Ensembl chr15:51,825,636...51,855,143
JBrowse link
G Rad52 RAD52 homolog, DNA repair protein IAGP MGI PMID:15122331 NCBI chr 6:119,878,781...119,899,789
Ensembl chr 6:119,879,659...119,899,789
JBrowse link
G Rag1 recombination activating 1 IAGP MGI PMID:10762410 PMID:14557749 PMID:16169499 PMID:16804066 PMID:19126872 NCBI chr 2:101,468,597...101,479,877
Ensembl chr 2:101,468,627...101,479,846
JBrowse link
G Rag2 recombination activating gene 2 IAGP MGI PMID:1547487 PMID:9285410 PMID:9341770 PMID:10843678 PMID:17617584 More... NCBI chr 2:101,455,057...101,462,873
Ensembl chr 2:101,455,063...101,462,874
JBrowse link
G Rasa3 RAS p21 protein activator 3 IAGP MGI PMID:22773809 NCBI chr 8:13,617,218...13,727,590
Ensembl chr 8:13,616,948...13,727,603
JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 IAGP MGI PMID:24336796 NCBI chr 2:117,110,464...117,173,358
Ensembl chr 2:117,110,474...117,173,482
JBrowse link
G Rassf2 Ras association (RalGDS/AF-6) domain family member 2 IAGP MGI PMID:22227519 NCBI chr 2:131,834,770...131,872,336
Ensembl chr 2:131,831,335...131,872,178
JBrowse link
G Rc3h1 RING CCCH (C3H) domains 1 IAGP MGI PMID:23583643 NCBI chr 1:160,733,981...160,802,546
Ensembl chr 1:160,733,988...160,802,548
JBrowse link
G Rc3h2 ring finger and CCCH-type zinc finger domains 2 IAGP MGI PMID:23583643 NCBI chr 2:37,260,078...37,313,007
Ensembl chr 2:37,260,081...37,312,915
JBrowse link
G Rel reticuloendotheliosis oncogene IEA MGI NCBI chr11:23,686,847...23,720,969
Ensembl chr11:23,686,847...23,720,970
JBrowse link
G Rfx5 regulatory factor X, 5 (influences HLA class II expression) IAGP MGI PMID:9491996 NCBI chr 3:94,861,355...94,868,685
Ensembl chr 3:94,861,386...94,868,872
JBrowse link
G Rhoh ras homolog family member H IAGP MGI PMID:17119112 NCBI chr 5:66,018,092...66,054,043
Ensembl chr 5:66,018,556...66,054,043
JBrowse link
G Rnf8 ring finger protein 8 IAGP MGI PMID:20385750 NCBI chr17:29,833,763...29,860,638
Ensembl chr17:29,833,764...29,863,965
JBrowse link
G Rorc RAR-related orphan receptor gamma IAGP MGI PMID:10963675 PMID:28846085 NCBI chr 3:94,280,106...94,305,583
Ensembl chr 3:94,280,101...94,305,583
JBrowse link
G Rpl22 ribosomal protein L22 IAGP MGI PMID:17555992 NCBI chr 4:152,408,893...152,418,539
Ensembl chr 4:152,410,199...152,418,528
JBrowse link
G Runx1 runt related transcription factor 1 IAGP MGI PMID:16081688 PMID:16247465 PMID:17290219 PMID:17646406 PMID:18258917 More... NCBI chr16:92,398,354...92,622,962
Ensembl chr16:92,398,354...92,623,037
JBrowse link
G Runx3 runt related transcription factor 3 IAGP MGI PMID:18258917 NCBI chr 4:134,847,956...134,905,301
Ensembl chr 4:134,847,963...134,905,301
JBrowse link
G Ruvbl2 RuvB-like AAA ATPase 2 IAGP MGI PMID:22761313 NCBI chr 7:45,071,320...45,084,817
Ensembl chr 7:45,071,184...45,087,520
JBrowse link
G Sema4d sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D IAGP MGI PMID:11114376 NCBI chr13:51,839,565...51,947,823
Ensembl chr13:51,839,565...51,947,783
JBrowse link
G Septin9 septin 9 IAGP MGI PMID:23644740 NCBI chr11:117,090,487...117,253,151
Ensembl chr11:117,090,487...117,253,151
JBrowse link
G Sgpl1 sphingosine phosphate lyase 1 IAGP MGI PMID:19119317 NCBI chr10:60,934,421...60,983,463
Ensembl chr10:60,934,421...60,983,482
JBrowse link
G Sgsm1 small G protein signaling modulator 1 IEA MGI NCBI chr 5:113,391,086...113,458,654
Ensembl chr 5:113,391,086...113,458,652
JBrowse link
G Sh2d1a SH2 domain containing 1A IAGP MGI PMID:20153220 NCBI chr  X:41,591,442...41,610,974
Ensembl chr  X:41,591,330...41,618,207
JBrowse link
G Sharpin SHANK-associated RH domain interacting protein IAGP MGI PMID:10201907 NCBI chr15:76,231,240...76,235,310
Ensembl chr15:76,231,240...76,235,311
JBrowse link
G Shcbp1 Shc SH2-domain binding protein 1 IAGP MGI PMID:25153088 NCBI chr 8:4,785,976...4,829,549
Ensembl chr 8:4,785,976...4,829,567
JBrowse link
G Sik3 SIK family kinase 3 IEA MGI NCBI chr 9:45,924,099...46,135,492
Ensembl chr 9:45,924,118...46,135,492
JBrowse link
G Sit1 suppression inducing transmembrane adaptor 1 IAGP MGI PMID:16107703 NCBI chr 4:43,482,083...43,483,709
Ensembl chr 4:43,482,081...43,483,734
JBrowse link
G Sla src-like adaptor IAGP MGI PMID:11567635 NCBI chr15:66,652,713...66,703,921
Ensembl chr15:66,652,668...66,703,678
JBrowse link
G Slfn2 schlafen 2 IAGP MGI PMID:20190759 NCBI chr11:82,955,938...82,961,504
Ensembl chr11:82,955,938...82,961,504
JBrowse link
G Smarca4 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 IAGP MGI PMID:12932351 NCBI chr 9:21,527,377...21,615,526
Ensembl chr 9:21,527,465...21,615,526
JBrowse link
G Snrnp40 small nuclear ribonucleoprotein 40 (U5) IAGP MGI PMID:31427773 NCBI chr 4:130,253,925...130,283,826
Ensembl chr 4:130,253,925...130,283,819
JBrowse link
G Socs1 suppressor of cytokine signaling 1 IAGP MGI PMID:18322180 NCBI chr16:10,601,672...10,603,400
Ensembl chr16:10,600,104...10,603,400
JBrowse link
G Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 IAGP MGI PMID:21746917 NCBI chr17:80,701,181...80,787,882
Ensembl chr17:80,701,180...80,787,882
JBrowse link
G Sp3 trans-acting transcription factor 3 IAGP MGI PMID:12676787 NCBI chr 2:72,766,774...72,810,790
Ensembl chr 2:72,766,771...72,810,790
JBrowse link
G Spi1 spleen focus forming virus (SFFV) proviral integration oncogene IAGP MGI PMID:8896458 NCBI chr 2:90,912,750...90,946,104
Ensembl chr 2:90,912,735...90,946,101
JBrowse link
G Spns2 SPNS lysolipid transporter 2, sphingosine-1-phosphate IAGP MGI PMID:22406534 PMID:22664872 PMID:24652767 NCBI chr11:72,342,464...72,380,797
Ensembl chr11:72,342,464...72,380,730
JBrowse link
G Sppl2a signal peptide peptidase like 2A IAGP MGI PMID:23267016 NCBI chr 2:126,732,311...126,775,706
Ensembl chr 2:126,732,311...126,775,155
JBrowse link
G Srf serum response factor IAGP MGI PMID:17591768 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101
JBrowse link
G St14 suppression of tumorigenicity 14 (colon carcinoma) IAGP MGI PMID:24551030 NCBI chr 9:30,999,886...31,043,138
Ensembl chr 9:31,000,698...31,043,149
JBrowse link
G Stk4 serine/threonine kinase 4 IAGP MGI PMID:19073936 PMID:19692642 NCBI chr 2:163,916,033...163,997,444
Ensembl chr 2:163,912,242...163,997,444
JBrowse link
G Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) IAGP MGI PMID:19145458 NCBI chr10:62,265,000...62,287,294
Ensembl chr10:62,264,988...62,285,517
JBrowse link
G Sytl1 synaptotagmin-like 1 IAGP MGI PMID:24652767 NCBI chr 4:132,980,401...132,990,398
Ensembl chr 4:132,980,401...132,990,424
JBrowse link
G Taf7 TATA-box binding protein associated factor 7 IAGP MGI PMID:22411629 NCBI chr18:37,773,544...37,777,257
Ensembl chr18:37,773,544...37,777,257
JBrowse link
G Tarm1 T cell-interacting, activating receptor on myeloid cells 1 IAGP MGI PMID:33397982 NCBI chr 7:3,535,015...3,551,159
Ensembl chr 7:3,535,016...3,551,140
JBrowse link
G Tbx21 T-box 21 IAGP MGI PMID:20713880 NCBI chr11:96,988,833...97,006,157
Ensembl chr11:96,988,897...97,006,157
JBrowse link
G Tcf12 transcription factor 12 IAGP MGI PMID:18093538 NCBI chr 9:71,751,534...72,019,611
Ensembl chr 9:71,749,970...72,019,153
JBrowse link
G Tcf3 transcription factor 3 IAGP MGI PMID:18093538 NCBI chr10:80,245,375...80,269,814
Ensembl chr10:80,245,348...80,269,481
JBrowse link
G Tcf7 transcription factor 7, T cell specific IEA MGI NCBI chr11:52,137,347...52,174,211
Ensembl chr11:52,143,198...52,174,158
JBrowse link
G Tcra T cell receptor alpha chain IAGP MGI PMID:1359428 PMID:17617584 NCBI chr14:52,665,424...54,461,655 JBrowse link
G Tcrb T cell receptor beta chain IAGP MGI PMID:1359428 PMID:17617584 NCBI chr 6:40,868,230...41,535,305 JBrowse link
G Tespa1 thymocyte expressed, positive selection associated 1 IAGP MGI PMID:22561606 NCBI chr10:130,158,696...130,199,338
Ensembl chr10:130,158,739...130,199,980
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IAGP MGI PMID:11342667 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502
JBrowse link
G Themis thymocyte selection associated IAGP MGI PMID:19597497 PMID:19597498 PMID:19597499 PMID:19620281 PMID:19805304 NCBI chr10:28,544,356...28,759,816
Ensembl chr10:28,544,356...28,759,814
JBrowse link
G Tmc6 transmembrane channel-like gene family 6 IAGP MGI PMID:32917726 NCBI chr11:117,656,811...117,673,019
Ensembl chr11:117,656,814...117,673,024
JBrowse link
G Tmc8 transmembrane channel-like gene family 8 IAGP MGI PMID:32917726 NCBI chr11:117,672,396...117,683,963
Ensembl chr11:117,672,902...117,683,936
JBrowse link
G Tmem126a transmembrane protein 126A IEA MGI NCBI chr 7:90,099,908...90,106,411
Ensembl chr 7:90,099,908...90,106,437
JBrowse link
G Tmem127 transmembrane protein 127 IEA MGI NCBI chr 2:127,089,868...127,103,028
Ensembl chr 2:127,089,828...127,103,027
JBrowse link
G Tox thymocyte selection-associated high mobility group box IAGP MGI PMID:18195075 NCBI chr 4:6,686,353...6,991,557
Ensembl chr 4:6,686,353...6,991,557
JBrowse link
G Traf3 TNF receptor-associated factor 3 IAGP MGI PMID:18313334 NCBI chr12:111,132,799...111,233,589
Ensembl chr12:111,132,804...111,233,587
JBrowse link
G Trip10 thyroid hormone receptor interactor 10 IAGP MGI PMID:20805498 NCBI chr17:57,540,227...57,570,712
Ensembl chr17:57,556,455...57,570,665
JBrowse link
G Trmt6 tRNA methyltransferase 6 IAGP MGI PMID:36138184 NCBI chr 2:132,646,127...132,658,127
Ensembl chr 2:132,646,127...132,657,975
JBrowse link
G Trmt61a tRNA methyltransferase 61A IAGP MGI PMID:36138184 NCBI chr12:111,644,539...111,650,336
Ensembl chr12:111,644,539...111,650,336
JBrowse link
G Trp53bp1 transformation related protein 53 binding protein 1 IAGP MGI PMID:12640136 NCBI chr 2:121,025,316...121,126,830
Ensembl chr 2:121,023,762...121,101,888
JBrowse link
G Txk TXK tyrosine kinase IAGP MGI PMID:10213685 NCBI chr 5:72,853,321...72,910,337
Ensembl chr 5:72,853,321...72,910,120
JBrowse link
G Upf2 UPF2 regulator of nonsense transcripts homolog (yeast) IAGP MGI PMID:18483223 NCBI chr 2:5,956,218...6,061,514
Ensembl chr 2:5,956,280...6,061,514
JBrowse link
G Vav1 vav 1 oncogene IAGP MGI PMID:9601639 PMID:11376342 PMID:16169499 PMID:19009524 NCBI chr17:57,586,080...57,636,236
Ensembl chr17:57,586,100...57,635,031
JBrowse link
G Vav2 vav 2 oncogene IAGP MGI PMID:11376342 NCBI chr 2:27,152,116...27,317,620
Ensembl chr 2:27,152,116...27,317,045
JBrowse link
G Vcam1 vascular cell adhesion molecule 1 IAGP MGI PMID:11257140 NCBI chr 3:115,903,669...115,923,337
Ensembl chr 3:115,903,598...115,923,337
JBrowse link
G Xrcc5 X-ray repair complementing defective repair in Chinese hamster cells 5 IEA MGI NCBI chr 1:72,346,576...72,434,112
Ensembl chr 1:72,346,586...72,434,111
JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase IAGP MGI PMID:11567635 PMID:14647385 PMID:17767948 PMID:19841086 PMID:24164480 NCBI chr 1:36,800,912...36,821,899
Ensembl chr 1:36,800,879...36,821,899
JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 IAGP MGI PMID:22201126 NCBI chr12:76,416,825...76,443,729
Ensembl chr12:76,417,040...76,443,724
JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B IAGP MGI PMID:18776904 PMID:18776905 PMID:18776907 PMID:21435585 PMID:23315079 More... NCBI chr 3:89,284,953...89,300,976
Ensembl chr 3:89,284,951...89,302,083
JBrowse link
G Zfat zinc finger and AT hook domain containing IAGP MGI PMID:22828507 NCBI chr15:67,955,563...68,130,771
Ensembl chr15:67,955,613...68,130,705
JBrowse link
G Zfp131 zinc finger protein 131 IAGP MGI PMID:26136427 NCBI chr13:120,226,722...120,253,070
Ensembl chr13:120,226,723...120,252,425
JBrowse link
G Zfp335 zinc finger protein 335 IAGP MGI PMID:25343476 NCBI chr 2:164,733,802...164,756,034
Ensembl chr 2:164,733,802...164,753,677
JBrowse link
G Zranb1 zinc finger, RAN-binding domain containing 1 IAGP MGI PMID:26808229 NCBI chr 7:132,532,905...132,588,127
Ensembl chr 7:132,532,871...132,588,120
JBrowse link
absent CD4-positive, alpha-beta T cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G B2m beta-2 microglobulin IAGP MGI PMID:12065839 NCBI chr 2:121,978,168...121,983,563
Ensembl chr 2:121,978,167...121,983,564
JBrowse link
G Bcl11a BCL11 transcription factor A IAGP MGI PMID:12717432 NCBI chr11:24,026,498...24,123,558
Ensembl chr11:24,028,056...24,124,123
JBrowse link
G Bcl2l1 BCL2-like 1 IAGP MGI PMID:18566418 NCBI chr 2:152,600,652...152,673,632
Ensembl chr 2:152,622,588...152,673,648
JBrowse link
G Cd3e CD3 antigen, epsilon polypeptide IAGP MGI PMID:12065839 NCBI chr 9:44,910,033...44,920,961
Ensembl chr 9:44,910,038...44,920,925
JBrowse link
G Cd4 CD4 antigen IAGP MGI PMID:8467804 PMID:9521047 NCBI chr 6:124,841,656...124,865,210
Ensembl chr 6:124,841,655...124,865,184
JBrowse link
G Cd8a CD8 subunit alpha IAGP MGI PMID:15729333 NCBI chr 6:71,350,411...71,356,155
Ensembl chr 6:71,350,411...71,356,157
JBrowse link
G Ciita class II transactivator IAGP MGI PMID:24038328 NCBI chr16:10,297,877...10,348,928
Ensembl chr16:10,297,923...10,346,282
JBrowse link
G Dclre1c DNA cross-link repair 1C IAGP MGI PMID:24069355 NCBI chr 2:3,425,112...3,475,248
Ensembl chr 2:3,425,168...3,465,167
JBrowse link
G Dll4 delta like canonical Notch ligand 4 IAGP MGI PMID:18824583 NCBI chr 2:119,156,286...119,166,145
Ensembl chr 2:119,156,265...119,166,443
JBrowse link
G Dmd dystrophin, muscular dystrophy IAGP MGI PMID:17668421 NCBI chr  X:81,858,244...84,248,656
Ensembl chr  X:81,992,476...84,249,747
JBrowse link
G Fyn Fyn proto-oncogene IAGP MGI PMID:8934570 NCBI chr10:39,245,735...39,441,377
Ensembl chr10:39,244,851...39,441,377
JBrowse link
G H2-Ab1 histocompatibility 2, class II antigen A, beta 1 IAGP MGI PMID:12065839 PMID:22561606 PMID:23772037 NCBI chr17:34,482,201...34,488,392
Ensembl chr17:34,476,663...34,488,393
JBrowse link
G Itpkb inositol 1,4,5-trisphosphate 3-kinase B IAGP MGI PMID:14517551 NCBI chr 1:180,156,655...180,252,367
Ensembl chr 1:180,158,050...180,252,367
JBrowse link
G Itpkc inositol 1,4,5-trisphosphate 3-kinase C IAGP MGI PMID:14517551 NCBI chr 7:26,906,595...26,928,042
Ensembl chr 7:26,906,597...26,928,086
JBrowse link
G Lat linker for activation of T cells IAGP MGI PMID:12065839 PMID:12970761 NCBI chr 7:125,962,999...125,968,877
Ensembl chr 7:125,962,996...125,968,742
JBrowse link
G Mcl1 myeloid cell leukemia sequence 1 IAGP MGI PMID:18566418 NCBI chr 3:95,564,017...95,583,553
Ensembl chr 3:95,566,099...95,570,487
JBrowse link
G Mpz myelin protein zero IAGP MGI PMID:10632602 NCBI chr 1:170,978,282...170,988,699
Ensembl chr 1:170,978,280...170,988,699
JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide IAGP MGI PMID:17668421 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099
JBrowse link
G Rag1 recombination activating 1 IAGP MGI PMID:10632602 PMID:18187659 NCBI chr 2:101,468,597...101,479,877
Ensembl chr 2:101,468,627...101,479,846
JBrowse link
G Rag2 recombination activating gene 2 IAGP MGI PMID:17442925 NCBI chr 2:101,455,057...101,462,873
Ensembl chr 2:101,455,063...101,462,874
JBrowse link
G Tcrb T cell receptor beta chain IAGP MGI PMID:1359428 NCBI chr 6:40,868,230...41,535,305 JBrowse link
G Tcrd T cell receptor delta chain IAGP MGI PMID:1359428 NCBI chr14:54,183,530...54,396,655 JBrowse link
G Tespa1 thymocyte expressed, positive selection associated 1 IAGP MGI PMID:22561606 NCBI chr10:130,158,696...130,199,338
Ensembl chr10:130,158,739...130,199,980
JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase IEA MGI NCBI chr 1:36,800,912...36,821,899
Ensembl chr 1:36,800,879...36,821,899
JBrowse link
G Zbtb7b zinc finger and BTB domain containing 7B IAGP MGI PMID:9653162 PMID:15729333 NCBI chr 3:89,284,953...89,300,976
Ensembl chr 3:89,284,951...89,302,083
JBrowse link
decreased CD4-positive, alpha-beta memory T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2a1a B cell leukemia/lymphoma 2 related protein A1a IAGP MGI PMID:28085150 NCBI chr 9:88,838,973...88,844,469
Ensembl chr 9:88,838,953...88,844,472
JBrowse link
G Bcl2a1b B cell leukemia/lymphoma 2 related protein A1b IAGP MGI PMID:28085150 NCBI chr 9:89,081,326...89,089,891
Ensembl chr 9:89,081,262...89,089,880
JBrowse link
G Bcl2a1d B cell leukemia/lymphoma 2 related protein A1d IAGP MGI PMID:28085150 NCBI chr 9:88,605,341...88,613,903
Ensembl chr 9:88,605,338...88,613,967
JBrowse link
G Il27 interleukin 27 IEA MGI NCBI chr 7:126,188,181...126,194,197
Ensembl chr 7:126,188,182...126,194,113
JBrowse link
G Irf5 interferon regulatory factor 5 IEA MGI NCBI chr 6:29,526,129...29,541,874
Ensembl chr 6:29,526,624...29,541,870
JBrowse link
G Nfkbia nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha IAGP MGI PMID:21333553 NCBI chr12:55,536,194...55,539,432
Ensembl chr12:55,536,195...55,539,432
JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C IEA MGI NCBI chr 1:137,990,601...138,103,491
Ensembl chr 1:137,990,599...138,103,446
JBrowse link
G Septin9 septin 9 IAGP MGI PMID:23644740 NCBI chr11:117,090,487...117,253,151
Ensembl chr11:117,090,487...117,253,151
JBrowse link
G Slc1a5 solute carrier family 1 (neutral amino acid transporter), member 5 IAGP MGI PMID:24792914 NCBI chr 7:16,515,259...16,532,199
Ensembl chr 7:16,515,265...16,532,199
JBrowse link
G Traf3ip3 TRAF3 interacting protein 3 IAGP MGI PMID:26195727 NCBI chr 1:192,857,812...192,883,854
Ensembl chr 1:192,857,761...192,884,011
JBrowse link
G Zfp335 zinc finger protein 335 IAGP MGI PMID:25343476 NCBI chr 2:164,733,802...164,756,034
Ensembl chr 2:164,733,802...164,753,677
JBrowse link
decreased CD4-positive, CD25-positive, alpha-beta regulatory T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Batf basic leucine zipper transcription factor, ATF-like IAGP MGI PMID:20421391 NCBI chr12:85,733,494...85,755,861
Ensembl chr12:85,733,443...85,755,861
JBrowse link
G Card11 caspase recruitment domain family, member 11 IEA MGI NCBI chr 5:140,858,109...140,986,398
Ensembl chr 5:140,858,745...140,986,337
JBrowse link
G Cd27 CD27 antigen IEA MGI NCBI chr 6:125,209,583...125,214,014
Ensembl chr 6:125,209,585...125,213,973
JBrowse link
G Cd38 CD38 antigen IEA MGI NCBI chr 5:44,026,153...44,069,714
Ensembl chr 5:44,025,895...44,069,717
JBrowse link
G Diaph1 diaphanous related formin 1 IEA MGI NCBI chr18:37,976,654...38,068,573
Ensembl chr18:37,976,654...38,068,529
JBrowse link
G Elmo1 engulfment and cell motility 1 IEA MGI NCBI chr13:20,274,677...20,792,523
Ensembl chr13:20,274,766...20,792,523
JBrowse link
G Foxp3 forkhead box P3 IAGP MGI PMID:12612578 NCBI chr  X:7,445,915...7,461,482
Ensembl chr  X:7,439,883...7,461,484
JBrowse link
G Gmds GDP-mannose 4, 6-dehydratase IEA MGI NCBI chr13:32,003,566...32,522,744
Ensembl chr13:32,003,562...32,522,723
JBrowse link
G Gmnn geminin IAGP MGI PMID:20107189 NCBI chr13:24,935,828...24,954,222
Ensembl chr13:24,935,828...24,945,906
JBrowse link
G H2-Ab1 histocompatibility 2, class II antigen A, beta 1 IAGP MGI PMID:16709807 NCBI chr17:34,482,201...34,488,392
Ensembl chr17:34,476,663...34,488,393
JBrowse link
G Ikbkb inhibitor of kappaB kinase beta IAGP MGI PMID:33658989 NCBI chr 8:23,149,228...23,196,605
Ensembl chr 8:23,149,228...23,196,605
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 IEA MGI NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926
JBrowse link
G Itk IL2 inducible T cell kinase IEA MGI NCBI chr11:46,215,975...46,280,342
Ensembl chr11:46,215,977...46,280,342
JBrowse link
G Map3k7 mitogen-activated protein kinase kinase kinase 7 IAGP MGI PMID:26132627 NCBI chr 4:31,963,659...32,023,470
Ensembl chr 4:31,964,097...32,023,467
JBrowse link
G Piga phosphatidylinositol glycan anchor biosynthesis, class A IAGP MGI PMID:19679885 NCBI chr  X:163,202,814...163,216,912
Ensembl chr  X:163,202,783...163,216,912
JBrowse link
G Ptpn6 protein tyrosine phosphatase, non-receptor type 6 IEA MGI NCBI chr 6:124,697,670...124,715,672
Ensembl chr 6:124,697,670...124,715,677
JBrowse link
G Rasgrp1 RAS guanyl releasing protein 1 IEA MGI NCBI chr 2:117,110,464...117,173,358
Ensembl chr 2:117,110,474...117,173,482
JBrowse link
G St14 suppression of tumorigenicity 14 (colon carcinoma) IAGP MGI PMID:24551030 NCBI chr 9:30,999,886...31,043,138
Ensembl chr 9:31,000,698...31,043,149
JBrowse link
G Stat5a signal transducer and activator of transcription 5A IAGP MGI PMID:16493008 NCBI chr11:100,750,177...100,775,995
Ensembl chr11:100,750,177...100,775,995
JBrowse link
G Stat5b signal transducer and activator of transcription 5B IAGP MGI PMID:16493008 NCBI chr11:100,671,557...100,741,407
Ensembl chr11:100,671,557...100,741,550
JBrowse link
G Themis thymocyte selection associated IEA MGI NCBI chr10:28,544,356...28,759,816
Ensembl chr10:28,544,356...28,759,814
JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase IEA MGI NCBI chr 1:36,800,912...36,821,899
Ensembl chr 1:36,800,879...36,821,899
JBrowse link
decreased central memory CD4-positive, alpha-beta T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2a1a B cell leukemia/lymphoma 2 related protein A1a IAGP MGI PMID:28085150 NCBI chr 9:88,838,973...88,844,469
Ensembl chr 9:88,838,953...88,844,472
JBrowse link
G Bcl2a1b B cell leukemia/lymphoma 2 related protein A1b IAGP MGI PMID:28085150 NCBI chr 9:89,081,326...89,089,891
Ensembl chr 9:89,081,262...89,089,880
JBrowse link
G Bcl2a1d B cell leukemia/lymphoma 2 related protein A1d IAGP MGI PMID:28085150 NCBI chr 9:88,605,341...88,613,903
Ensembl chr 9:88,605,338...88,613,967
JBrowse link
G Card11 caspase recruitment domain family, member 11 IEA MGI NCBI chr 5:140,858,109...140,986,398
Ensembl chr 5:140,858,745...140,986,337
JBrowse link
G Cd44 CD44 antigen IEA MGI NCBI chr 2:102,641,486...102,732,014
Ensembl chr 2:102,641,486...102,732,010
JBrowse link
G Ikbkb inhibitor of kappaB kinase beta IEA MGI NCBI chr 8:23,149,228...23,196,605
Ensembl chr 8:23,149,228...23,196,605
JBrowse link
G Klhl6 kelch-like 6 IEA MGI NCBI chr16:19,765,242...19,801,766
Ensembl chr16:19,765,246...19,801,787
JBrowse link
G Nfkb1 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 IEA MGI NCBI chr 3:135,290,416...135,397,422
Ensembl chr 3:135,290,416...135,397,308
JBrowse link
G Rel reticuloendotheliosis oncogene IEA MGI NCBI chr11:23,686,847...23,720,969
Ensembl chr11:23,686,847...23,720,970
JBrowse link
decreased effector memory CD4-positive, alpha-beta T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl2a1a B cell leukemia/lymphoma 2 related protein A1a IAGP MGI PMID:28085150 NCBI chr 9:88,838,973...88,844,469
Ensembl chr 9:88,838,953...88,844,472
JBrowse link
G Bcl2a1b B cell leukemia/lymphoma 2 related protein A1b IAGP MGI PMID:28085150 NCBI chr 9:89,081,326...89,089,891
Ensembl chr 9:89,081,262...89,089,880
JBrowse link
G Bcl2a1d B cell leukemia/lymphoma 2 related protein A1d IAGP MGI PMID:28085150 NCBI chr 9:88,605,341...88,613,903
Ensembl chr 9:88,605,338...88,613,967
JBrowse link
G Card11 caspase recruitment domain family, member 11 IEA MGI NCBI chr 5:140,858,109...140,986,398
Ensembl chr 5:140,858,745...140,986,337
JBrowse link
G Cd44 CD44 antigen IEA MGI NCBI chr 2:102,641,486...102,732,014
Ensembl chr 2:102,641,486...102,732,010
JBrowse link
G Ebf1 early B cell factor 1 IEA MGI NCBI chr11:44,502,738...44,898,923
Ensembl chr11:44,508,144...44,898,918
JBrowse link
G Myd88 myeloid differentiation primary response gene 88 IAGP MGI PMID:26136579 NCBI chr 9:119,165,000...119,169,084
Ensembl chr 9:119,165,000...119,170,477
JBrowse link
G Nek8 NIMA (never in mitosis gene a)-related expressed kinase 8 IEA MGI NCBI chr11:78,056,932...78,067,501
Ensembl chr11:78,056,932...78,067,501
JBrowse link
G Nfkb1 nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 IEA MGI NCBI chr 3:135,290,416...135,397,422
Ensembl chr 3:135,290,416...135,397,308
JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide IEA MGI NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099
JBrowse link
G Ptprc protein tyrosine phosphatase receptor type C IEA MGI NCBI chr 1:137,990,601...138,103,491
Ensembl chr 1:137,990,599...138,103,446
JBrowse link
G Rel reticuloendotheliosis oncogene IEA MGI NCBI chr11:23,686,847...23,720,969
Ensembl chr11:23,686,847...23,720,970
JBrowse link
G Tap2 transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) IEA MGI NCBI chr17:34,423,453...34,435,295
Ensembl chr17:34,422,501...34,435,295
JBrowse link
decreased memory CD4-positive, CD25-positive, alpha-beta regulatory T cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Duoxa2 dual oxidase maturation factor 2 IEA MGI NCBI chr 2:122,129,381...122,133,088
Ensembl chr 2:122,129,381...122,133,366
JBrowse link
G Gmds GDP-mannose 4, 6-dehydratase IEA MGI NCBI chr13:32,003,566...32,522,744
Ensembl chr13:32,003,562...32,522,723
JBrowse link
decreased T follicular helper cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Batf basic leucine zipper transcription factor, ATF-like IAGP MGI PMID:20421391 NCBI chr12:85,733,494...85,755,861
Ensembl chr12:85,733,443...85,755,861
JBrowse link
G Bcl6 B cell leukemia/lymphoma 6 IAGP MGI PMID:21636294 PMID:23027924 PMID:23455674 PMID:23980208 NCBI chr16:23,780,058...23,807,602
Ensembl chr16:23,783,802...23,807,602
JBrowse link
G Itfg2 integrin alpha FG-GAP repeat containing 2 IAGP MGI PMID:23997217 NCBI chr 6:128,386,407...128,401,873
Ensembl chr 6:128,386,407...128,401,894
JBrowse link
G Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta IAGP MGI PMID:20826752 NCBI chr 4:149,733,625...149,787,023
Ensembl chr 4:149,733,625...149,787,028
JBrowse link
G Tnfrsf4 tumor necrosis factor receptor superfamily, member 4 IAGP MGI PMID:20826752 NCBI chr 4:156,098,049...156,101,070
Ensembl chr 4:156,098,300...156,101,069
JBrowse link
G Tnfsf15 tumor necrosis factor (ligand) superfamily, member 15 IAGP MGI PMID:24140642 NCBI chr 4:63,642,837...63,663,296
Ensembl chr 4:63,642,840...63,663,350
JBrowse link
decreased T helper 1 cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cd274 CD274 antigen IAGP MGI PMID:20639491 NCBI chr19:29,339,428...29,365,495
Ensembl chr19:29,344,855...29,365,495
JBrowse link
G Cd4 CD4 antigen IAGP MGI PMID:35304452 NCBI chr 6:124,841,656...124,865,210
Ensembl chr 6:124,841,655...124,865,184
JBrowse link
G Cd5 CD5 antigen IAGP MGI PMID:22904299 NCBI chr19:10,695,471...10,716,390
Ensembl chr19:10,694,480...10,716,366
JBrowse link
G Il1r1 interleukin 1 receptor, type I IAGP MGI PMID:30662948 NCBI chr 1:40,261,651...40,355,361
Ensembl chr 1:40,264,240...40,356,417
JBrowse link
G Nkg7 natural killer cell group 7 sequence IAGP MGI PMID:32839608 NCBI chr 7:43,086,562...43,087,670
Ensembl chr 7:43,086,497...43,087,673
JBrowse link
G Slc1a5 solute carrier family 1 (neutral amino acid transporter), member 5 IAGP MGI PMID:24792914 NCBI chr 7:16,515,259...16,532,199
Ensembl chr 7:16,515,265...16,532,199
JBrowse link
G Tbx21 T-box 21 IAGP MGI PMID:11786644 NCBI chr11:96,988,833...97,006,157
Ensembl chr11:96,988,897...97,006,157
JBrowse link
G Vsig4 V-set and immunoglobulin domain containing 4 IAGP MGI PMID:30662948 NCBI chr  X:95,290,807...95,337,044
Ensembl chr  X:95,290,809...95,337,044
JBrowse link
G Zranb1 zinc finger, RAN-binding domain containing 1 IAGP MGI PMID:26808229 NCBI chr 7:132,532,905...132,588,127
Ensembl chr 7:132,532,871...132,588,120
JBrowse link
decreased T-helper 17 cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Arid5a AT-rich interaction domain 5A IAGP MGI PMID:23676272 NCBI chr 1:36,346,814...36,363,117
Ensembl chr 1:36,346,814...36,363,110
JBrowse link
G B9d2 B9 protein domain 2 IAGP MGI PMID:21435587 NCBI chr 7:25,380,205...25,385,987
Ensembl chr 7:25,380,205...25,385,983
JBrowse link
G Batf basic leucine zipper transcription factor, ATF-like IAGP MGI PMID:20421391 NCBI chr12:85,733,494...85,755,861
Ensembl chr12:85,733,443...85,755,861
JBrowse link
G Cd274 CD274 antigen IAGP MGI PMID:21061440 NCBI chr19:29,339,428...29,365,495
Ensembl chr19:29,344,855...29,365,495
JBrowse link
G Cd5 CD5 antigen IAGP MGI PMID:22904299 NCBI chr19:10,695,471...10,716,390
Ensembl chr19:10,694,480...10,716,366
JBrowse link
G Elavl1 ELAV like RNA binding protein 1 IAGP MGI PMID:24166976 NCBI chr 8:4,334,781...4,375,104
Ensembl chr 8:4,335,382...4,375,413
JBrowse link
G Gnai2 G protein subunit alpha i2 IAGP MGI PMID:22550081 NCBI chr 9:107,491,324...107,512,542
Ensembl chr 9:107,491,324...107,512,566
JBrowse link
G Il1r1 interleukin 1 receptor, type I IAGP MGI PMID:30662948 NCBI chr 1:40,261,651...40,355,361
Ensembl chr 1:40,264,240...40,356,417
JBrowse link
G Mir155 microRNA 155 IAGP MGI PMID:26163372 NCBI chr16:84,511,028...84,511,092
Ensembl chr16:84,511,028...84,511,092
JBrowse link
G Pdcd1 programmed cell death 1 IAGP MGI PMID:22949674 NCBI chr 1:93,966,027...93,980,278
Ensembl chr 1:93,966,027...93,980,278
JBrowse link
G Pgam1 phosphoglycerate mutase 1 IAGP MGI PMID:32709928 NCBI chr19:41,900,310...41,907,104
Ensembl chr19:41,900,362...41,907,099
JBrowse link
G Siglech sialic acid binding Ig-like lectin H IAGP MGI PMID:22177923 NCBI chr 7:55,417,916...55,429,196
Ensembl chr 7:55,417,926...55,428,673
JBrowse link
G Slc1a5 solute carrier family 1 (neutral amino acid transporter), member 5 IAGP MGI PMID:24792914 NCBI chr 7:16,515,259...16,532,199
Ensembl chr 7:16,515,265...16,532,199
JBrowse link
G Stat3 signal transducer and activator of transcription 3 IAGP MGI PMID:17363300 NCBI chr11:100,777,632...100,830,447
Ensembl chr11:100,775,924...100,830,366
JBrowse link
G Tgfb1 transforming growth factor, beta 1 IAGP MGI PMID:21435587 NCBI chr 7:25,386,406...25,404,503
Ensembl chr 7:25,386,427...25,404,502
JBrowse link
G Tnfrsf4 tumor necrosis factor receptor superfamily, member 4 IAGP MGI PMID:21435587 PMID:24166976 NCBI chr 4:156,098,049...156,101,070
Ensembl chr 4:156,098,300...156,101,069
JBrowse link
G Vsig4 V-set and immunoglobulin domain containing 4 IAGP MGI PMID:30662948 NCBI chr  X:95,290,807...95,337,044
Ensembl chr  X:95,290,809...95,337,044
JBrowse link
G Zranb1 zinc finger, RAN-binding domain containing 1 IAGP MGI PMID:26808229 NCBI chr 7:132,532,905...132,588,127
Ensembl chr 7:132,532,871...132,588,120
JBrowse link
decreased T-helper 2 cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chi3l1 chitinase 3 like 1 IAGP MGI PMID:19414556 NCBI chr 1:134,109,894...134,117,769
Ensembl chr 1:134,109,914...134,117,919
JBrowse link
G Ebi3 Epstein-Barr virus induced gene 3 IAGP MGI PMID:12482940 NCBI chr17:56,259,623...56,264,022
Ensembl chr17:56,259,640...56,264,022
JBrowse link
G Gata3 GATA binding protein 3 IAGP MGI PMID:15475959 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845
JBrowse link
G Il13 interleukin 13 IAGP MGI PMID:9768762 NCBI chr11:53,522,150...53,525,529
Ensembl chr11:53,522,151...53,525,529
JBrowse link
G Il25 interleukin 25 IAGP MGI PMID:25888259 NCBI chr14:55,170,152...55,173,294
Ensembl chr14:55,170,152...55,173,294
JBrowse link
G Il4ra interleukin 4 receptor, alpha IAGP MGI PMID:21460847 NCBI chr 7:125,151,443...125,178,646
Ensembl chr 7:125,151,292...125,178,646
JBrowse link
G Nfatc2ip nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2 interacting protein IAGP MGI PMID:20133688 NCBI chr 7:125,982,025...125,995,909
Ensembl chr 7:125,982,026...125,995,909
JBrowse link
G Pdcd1 programmed cell death 1 IAGP MGI PMID:22949674 NCBI chr 1:93,966,027...93,980,278
Ensembl chr 1:93,966,027...93,980,278
JBrowse link
G Pgam1 phosphoglycerate mutase 1 IAGP MGI PMID:32709928 NCBI chr19:41,900,310...41,907,104
Ensembl chr19:41,900,362...41,907,099
JBrowse link
G Stat6 signal transducer and activator of transcription 6 IAGP MGI PMID:21460847 NCBI chr10:127,478,855...127,496,856
Ensembl chr10:127,478,855...127,496,826
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16657
    immune system phenotype 5591
      abnormal immune system morphology 4004
        abnormal immune system cell morphology 2798
          abnormal leukocyte morphology 2777
            abnormal leukocyte cell number 2493
              abnormal lymphocyte cell number 1670
                abnormal T cell number 1053
                  abnormal alpha-beta T cell number 684
                    abnormal CD4-positive, alpha-beta T cell number 514
                      decreased CD4-positive, alpha-beta T cell number 334
                        absent CD4-positive, alpha-beta T cells 25
                        decreased CD4-positive, CD25-positive, alpha-beta regulatory T cell number + 23
                        decreased CD4-positive, alpha-beta memory T cell number + 22
                        decreased KLRG1+ CD4 alpha-beta T cell number 0
                        decreased T follicular helper cell number 6
                        decreased T helper 1 cell number 9
                        decreased T-helper 17 cell number 18
                        decreased T-helper 2 cell number 10
Path 2
Term Annotations click to browse term
  mammalian phenotype 16657
    immune system phenotype 5591
      abnormal immune system morphology 4004
        abnormal immune system cell morphology 2798
          abnormal leukocyte morphology 2777
            abnormal mononuclear cell morphology 2234
              abnormal lymphocyte morphology 1807
                abnormal T cell morphology 1148
                  abnormal effector T cell morphology 837
                    abnormal CD4-positive, alpha beta T cell morphology 597
                      abnormal CD4-positive, alpha-beta T cell number 514
                        decreased CD4-positive, alpha-beta T cell number 334
                          absent CD4-positive, alpha-beta T cells 25
                          decreased CD4-positive, CD25-positive, alpha-beta regulatory T cell number + 23
                          decreased CD4-positive, alpha-beta memory T cell number + 22
                          decreased KLRG1+ CD4 alpha-beta T cell number 0
                          decreased T follicular helper cell number 6
                          decreased T helper 1 cell number 9
                          decreased T-helper 17 cell number 18
                          decreased T-helper 2 cell number 10
paths to the root