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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:absent T cells
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Accession:MP:0008070 term browser browse the term
Definition:absence of the lymphocytes that are responsible for cell-mediated immunity and immune system regulation



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absent T cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bcl11b B cell leukemia/lymphoma 11B IAGP MGI PMID:19092943 NCBI chr12:107,876,662...107,970,404
Ensembl chr12:107,876,662...107,969,861
JBrowse link
G Bcl2l11 BCL2-like 11 (apoptosis facilitator) IAGP MGI PMID:22201126 NCBI chr 2:127,967,958...128,004,467
Ensembl chr 2:127,967,958...128,004,467
JBrowse link
G Cbfb core binding factor beta IAGP MGI PMID:12434152 NCBI chr 8:105,897,230...105,944,621
Ensembl chr 8:105,897,306...105,944,621
JBrowse link
G Cd3e CD3 antigen, epsilon polypeptide IAGP MGI PMID:9885898 PMID:18209052 NCBI chr 9:44,910,033...44,920,961
Ensembl chr 9:44,910,038...44,920,925
JBrowse link
G Col7a1 collagen, type VII, alpha 1 IAGP MGI PMID:28892093 NCBI chr 9:108,782,654...108,813,943
Ensembl chr 9:108,782,654...108,813,943
JBrowse link
G Dclre1c DNA cross-link repair 1C IAGP MGI PMID:24069355 NCBI chr 2:3,425,112...3,475,248
Ensembl chr 2:3,425,168...3,465,167
JBrowse link
G Foxn1 forkhead box N1 IAGP MGI PMID:8629026 PMID:10878619 PMID:22072979 NCBI chr11:78,248,403...78,277,597
Ensembl chr11:78,248,403...78,277,384
JBrowse link
G Fyn Fyn proto-oncogene IAGP MGI PMID:8934569 NCBI chr10:39,245,735...39,441,377
Ensembl chr10:39,244,851...39,441,377
JBrowse link
G Ikzf1 IKAROS family zinc finger 1 IAGP MGI PMID:12871645 NCBI chr11:11,634,970...11,722,930
Ensembl chr11:11,634,980...11,722,926
JBrowse link
G Il2rg interleukin 2 receptor, gamma chain IAGP MGI PMID:12586624 PMID:17082625 NCBI chr  X:100,307,991...100,311,861
Ensembl chr  X:100,307,984...100,311,861
JBrowse link
G Ins2 insulin II IAGP MGI PMID:18563383 NCBI chr 7:142,232,393...142,233,463
Ensembl chr 7:142,232,393...142,297,118
JBrowse link
G Itpkb inositol 1,4,5-trisphosphate 3-kinase B IAGP MGI PMID:14517551 NCBI chr 1:180,156,655...180,252,367
Ensembl chr 1:180,158,050...180,252,367
JBrowse link
G Klf2 Kruppel-like factor 2 (lung) IAGP MGI PMID:17141159 NCBI chr 8:73,072,906...73,075,498
Ensembl chr 8:73,072,877...73,075,500
JBrowse link
G Lat linker for activation of T cells IAGP MGI PMID:19380807 NCBI chr 7:125,962,999...125,968,877
Ensembl chr 7:125,962,996...125,968,742
JBrowse link
G Lyz2 lysozyme 2 IAGP MGI PMID:19501000 NCBI chr10:117,113,446...117,118,177
Ensembl chr10:117,113,236...117,118,226
JBrowse link
G Nlrp3 NLR family, pyrin domain containing 3 IAGP MGI PMID:19501000 NCBI chr11:59,432,395...59,457,781
Ensembl chr11:59,432,394...59,457,782
JBrowse link
G Noc2l NOC2 like nucleolar associated transcriptional repressor IAGP MGI PMID:25201955 NCBI chr 4:156,319,112...156,332,073
Ensembl chr 4:156,320,376...156,332,073
JBrowse link
G Prf1 perforin 1 (pore forming protein) IAGP MGI PMID:18563383 NCBI chr10:61,133,530...61,140,463
Ensembl chr10:61,133,612...61,140,459
JBrowse link
G Prkdc protein kinase, DNA activated, catalytic polypeptide IAGP MGI PMID:17662890 NCBI chr16:15,455,698...15,660,103
Ensembl chr16:15,455,730...15,660,099
JBrowse link
G Ptprc protein tyrosine phosphatase, receptor type, C IEA MGI NCBI chr 1:137,990,597...138,103,491
Ensembl chr 1:137,990,599...138,103,446
JBrowse link
G Rag1 recombination activating 1 IAGP MGI PMID:18563383 PMID:19501000 NCBI chr 2:101,468,597...101,479,877
Ensembl chr 2:101,468,627...101,479,846
JBrowse link
G Rag2 recombination activating gene 2 IAGP MGI PMID:12586624 PMID:17082625 NCBI chr 2:101,455,057...101,462,873
Ensembl chr 2:101,455,063...101,462,874
JBrowse link
G Tcf12 transcription factor 12 IAGP MGI PMID:10958665 NCBI chr 9:71,751,534...72,019,611
Ensembl chr 9:71,749,970...72,019,153
JBrowse link
G Tcra T cell receptor alpha chain IAGP MGI PMID:15004164 NCBI chr14:52,665,424...54,461,655 JBrowse link
G Xrcc5 X-ray repair complementing defective repair in Chinese hamster cells 5 IAGP MGI PMID:8756720 NCBI chr 1:72,346,576...72,434,112
Ensembl chr 1:72,346,586...72,434,111
JBrowse link
G Zap70 zeta-chain (TCR) associated protein kinase IEA MGI NCBI chr 1:36,800,879...36,821,902
Ensembl chr 1:36,800,879...36,821,899
JBrowse link
G Zbtb1 zinc finger and BTB domain containing 1 IAGP MGI PMID:22201126 NCBI chr12:76,416,825...76,443,729
Ensembl chr12:76,417,040...76,443,724
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16210
    immune system phenotype 5372
      abnormal immune system morphology 3798
        abnormal immune system cell morphology 2662
          abnormal leukocyte morphology 2641
            abnormal leukocyte cell number 2363
              abnormal lymphocyte cell number 1615
                decreased lymphocyte cell number 1226
                  decreased T cell number 755
                    absent T cells 27
Path 2
Term Annotations click to browse term
  mammalian phenotype 16210
    immune system phenotype 5372
      abnormal immune system morphology 3798
        abnormal immune system cell morphology 2662
          abnormal leukocyte morphology 2641
            abnormal mononuclear cell morphology 2154
              abnormal lymphocyte morphology 1746
                abnormal lymphocyte cell number 1615
                  decreased lymphocyte cell number 1226
                    decreased T cell number 755
                      absent T cells 27
paths to the root