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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:decreased skeletal muscle mass
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Accession:MP:0004819 term browser browse the term
Definition:reduction in the physical bulk, or total amount of matter contained within skeletal muscle
Synonyms:exact_synonym: reduced skeletal muscle mass



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decreased skeletal muscle mass term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Aifm1 apoptosis-inducing factor, mitochondrion-associated 1 IAGP MGI PMID:16287843 NCBI chr  X:47,563,821...47,602,440
Ensembl chr  X:47,563,821...47,602,440
JBrowse link
G Asnsd1 asparagine synthetase domain containing 1 IAGP MGI PMID:32638637 NCBI chr 1:53,383,776...53,391,911
Ensembl chr 1:53,364,666...53,391,826
Ensembl chr 1:53,364,666...53,391,826
JBrowse link
G Atp7a ATPase, copper transporting, alpha polypeptide IAGP MGI PMID:25639447 NCBI chr  X:105,070,830...105,171,766
Ensembl chr  X:105,070,882...105,168,532
JBrowse link
G Barx2 BarH-like homeobox 2 IAGP MGI PMID:22076929 NCBI chr 9:31,757,340...31,824,581
Ensembl chr 9:31,757,340...31,824,758
JBrowse link
G Cacna1s calcium channel, voltage-dependent, L type, alpha 1S subunit IAGP MGI PMID:14300096 NCBI chr 1:135,980,549...136,047,268
Ensembl chr 1:135,980,488...136,047,560
JBrowse link
G Cacnb1 calcium channel, voltage-dependent, beta 1 subunit IAGP MGI PMID:8943043 NCBI chr11:97,892,339...97,913,860
Ensembl chr11:97,892,334...97,913,860
JBrowse link
G Capn3 calpain 3 IAGP MGI PMID:15138196 NCBI chr 2:120,294,074...120,335,400
Ensembl chr 2:120,294,053...120,335,399
JBrowse link
G Cdc73 cell division cycle 73, Paf1/RNA polymerase II complex component IAGP MGI PMID:18212049 NCBI chr 1:143,479,014...143,578,631
Ensembl chr 1:143,474,538...143,578,631
JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A IAGP MGI PMID:9925645 NCBI chr17:29,309,953...29,319,696
Ensembl chr17:29,309,950...29,319,701
JBrowse link
G Cdkn1c cyclin dependent kinase inhibitor 1C IAGP MGI PMID:9925645 NCBI chr 7:143,012,076...143,014,735
Ensembl chr 7:143,012,076...143,014,787
JBrowse link
G Chchd10 coiled-coil-helix-coiled-coil-helix domain containing 10 IAGP MGI PMID:30877432 NCBI chr10:75,768,964...75,773,584
Ensembl chr10:75,768,964...75,773,581
JBrowse link
G Ckmt2 creatine kinase, mitochondrial 2 IAGP MGI PMID:11713654 NCBI chr13:92,001,510...92,025,001
Ensembl chr13:92,001,506...92,025,004
JBrowse link
G Clnk cytokine-dependent hematopoietic cell linker IEA MGI NCBI chr 5:38,858,951...39,034,201
Ensembl chr 5:38,863,805...39,034,155
JBrowse link
G Col6a1 collagen, type VI, alpha 1 IAGP MGI PMID:28043812 NCBI chr10:76,544,626...76,561,869
Ensembl chr10:76,544,626...76,562,002
JBrowse link
G Cox10 heme A:farnesyltransferase cytochrome c oxidase assembly factor 10 IAGP MGI PMID:16103131 NCBI chr11:63,853,453...63,970,298
Ensembl chr11:63,853,453...63,970,294
JBrowse link
G Dll1 delta like canonical Notch ligand 1 IAGP MGI PMID:17194759 PMID:19144989 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134
JBrowse link
G Dmd dystrophin, muscular dystrophy IAGP MGI PMID:20304955 PMID:26566673 NCBI chr  X:81,858,244...84,248,656
Ensembl chr  X:81,992,476...84,249,747
JBrowse link
G Dnajb4 DnaJ heat shock protein family (Hsp40) member B4 IAGP MGI PMID:36512060 NCBI chr 3:151,887,217...151,915,720
Ensembl chr 3:151,884,148...151,915,939
JBrowse link
G Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 IAGP MGI PMID:15091340 NCBI chr 2:181,162,141...181,194,679
Ensembl chr 2:181,162,278...181,196,926
JBrowse link
G Dnm2 dynamin 2 IAGP MGI PMID:20858595 NCBI chr 9:21,336,167...21,419,055
Ensembl chr 9:21,336,204...21,419,055
JBrowse link
G Dock1 dedicator of cytokinesis 1 IAGP MGI PMID:18820033 NCBI chr 7:134,272,416...134,775,376
Ensembl chr 7:134,272,383...134,775,368
JBrowse link
G Drosha drosha, ribonuclease type III IAGP MGI PMID:18725527 NCBI chr15:12,824,893...12,935,377
Ensembl chr15:12,824,901...12,935,377
JBrowse link
G Eef1a2 eukaryotic translation elongation factor 1 alpha 2 IAGP MGI PMID:32160274 NCBI chr 2:180,783,551...180,798,808
Ensembl chr 2:180,789,446...180,798,807
JBrowse link
G Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 IAGP MGI PMID:15213227 NCBI chr 2:118,219,065...118,305,715
Ensembl chr 2:118,219,099...118,305,715
JBrowse link
G Eif3f eukaryotic translation initiation factor 3, subunit F IAGP MGI PMID:31026345 NCBI chr 7:108,533,622...108,541,149
Ensembl chr 7:108,533,624...108,542,158
JBrowse link
G Ercc1 excision repair cross-complementing rodent repair deficiency, complementation group 1 IAGP MGI PMID:17183314 NCBI chr 7:19,079,016...19,090,449
Ensembl chr 7:19,078,703...19,090,449
JBrowse link
G Fat1 FAT atypical cadherin 1 IAGP MGI PMID:23785297 NCBI chr 8:45,386,137...45,505,294
Ensembl chr 8:45,388,484...45,505,294
JBrowse link
G Flnc filamin C, gamma IAGP MGI PMID:16914736 NCBI chr 6:29,433,150...29,461,888
Ensembl chr 6:29,433,255...29,461,882
JBrowse link
G Foxn1 forkhead box N1 IAGP MGI PMID:15694130 NCBI chr11:78,248,403...78,277,597
Ensembl chr11:78,248,403...78,277,384
JBrowse link
G Fst follistatin IAGP MGI PMID:7885475 NCBI chr13:114,588,798...114,595,522
Ensembl chr13:114,588,826...114,595,487
JBrowse link
G Gaa glucosidase, alpha, acid IAGP MGI PMID:15674828 NCBI chr11:119,158,789...119,176,284
Ensembl chr11:119,158,713...119,176,280
JBrowse link
G Gab1 growth factor receptor bound protein 2-associated protein 1 IAGP MGI PMID:17881575 NCBI chr 8:81,491,060...81,607,151
Ensembl chr 8:81,491,063...81,607,148
JBrowse link
G Gmppa GDP-mannose pyrophosphorylase A IAGP MGI PMID:33755596 NCBI chr 1:75,412,555...75,419,823
Ensembl chr 1:75,412,574...75,419,823
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:20215352 PMID:30429376 PMID:31833196 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Hat1 histone aminotransferase 1 IAGP MGI PMID:31290578 NCBI chr 2:71,219,604...71,271,966
Ensembl chr 2:71,219,302...71,271,966
JBrowse link
G Hrc histidine rich calcium binding protein IAGP MGI PMID:17030629 NCBI chr 7:44,984,693...44,988,397
Ensembl chr 7:44,984,714...44,988,398
JBrowse link
G Itga7 integrin alpha 7 IAGP MGI PMID:22798625 NCBI chr10:128,769,633...128,794,155
Ensembl chr10:128,769,645...128,794,155
JBrowse link
G Itgb1 integrin beta 1 (fibronectin receptor beta) IAGP MGI PMID:12620989 NCBI chr 8:129,412,135...129,460,060
Ensembl chr 8:129,412,135...129,459,681
JBrowse link
G Lamc1 laminin, gamma 1 IAGP MGI PMID:22767514 NCBI chr 1:153,094,668...153,208,532
Ensembl chr 1:153,094,668...153,208,532
JBrowse link
G Lbx1 ladybird homeobox 1 IAGP MGI PMID:10603357 NCBI chr19:45,221,123...45,225,280
Ensembl chr19:45,221,123...45,224,251
JBrowse link
G Lep leptin IAGP MGI PMID:19528970 NCBI chr 6:29,060,220...29,073,875
Ensembl chr 6:29,060,219...29,073,876
JBrowse link
G Lncpint long non-protein coding RNA, Trp53 induced transcript IAGP MGI PMID:25909911 NCBI chr 6:31,070,498...31,195,409
Ensembl chr 6:31,059,500...31,197,423
JBrowse link
G Mcoln1 mucolipin 1 IAGP MGI PMID:17924347 NCBI chr 8:3,550,458...3,565,232
Ensembl chr 8:3,550,457...3,565,232
JBrowse link
G Meox2 mesenchyme homeobox 2 IAGP MGI PMID:10403250 NCBI chr12:37,158,539...37,229,533
Ensembl chr12:37,158,539...37,229,533
JBrowse link
G Met met proto-oncogene IAGP MGI PMID:8898205 PMID:11430831 NCBI chr 6:17,463,351...17,573,979
Ensembl chr 6:17,463,799...17,573,979
JBrowse link
G Mnx1 motor neuron and pancreas homeobox 1 IAGP MGI PMID:25639447 NCBI chr 5:29,678,821...29,683,468
Ensembl chr 5:29,678,032...29,683,468
JBrowse link
G Mtm1 X-linked myotubular myopathy gene 1 IAGP MGI PMID:22068590 NCBI chr  X:70,254,373...70,359,019
Ensembl chr  X:70,254,373...70,359,297
JBrowse link
G Musk muscle, skeletal, receptor tyrosine kinase IAGP MGI PMID:18718936 NCBI chr 4:58,285,742...58,377,848
Ensembl chr 4:58,285,962...58,374,303
JBrowse link
G Mybpc1 myosin binding protein C, slow-type IEA MGI NCBI chr10:88,354,141...88,441,051
Ensembl chr10:88,354,141...88,441,014
JBrowse link
G Myf5 myogenic factor 5 IAGP MGI PMID:29168801 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995
JBrowse link
G Myh1 myosin, heavy polypeptide 1, skeletal muscle, adult IAGP MGI PMID:9382868 NCBI chr11:67,090,922...67,115,401
Ensembl chr11:67,090,878...67,115,401
JBrowse link
G Myh4 myosin, heavy polypeptide 4, skeletal muscle IAGP MGI PMID:9382868 PMID:11150240 PMID:11171584 NCBI chr11:67,128,638...67,151,273
Ensembl chr11:67,128,855...67,151,272
JBrowse link
G Myl1 myosin, light polypeptide 1 IAGP MGI PMID:16103131 NCBI chr 1:66,963,454...66,987,091
Ensembl chr 1:66,963,454...66,984,563
JBrowse link
G Myog myogenin IAGP MGI PMID:8393145 NCBI chr 1:134,217,742...134,220,286
Ensembl chr 1:134,217,727...134,220,286
JBrowse link
G Naca nascent polypeptide-associated complex alpha polypeptide IAGP MGI PMID:21071677 NCBI chr10:127,869,144...127,884,506
Ensembl chr10:127,871,444...127,884,506
JBrowse link
G Nf1 neurofibromin 1 IAGP MGI PMID:21478499 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438
JBrowse link
G Nmnat2 nicotinamide nucleotide adenylyltransferase 2 IAGP MGI PMID:23082226 NCBI chr 1:152,830,532...152,995,012
Ensembl chr 1:152,830,744...152,995,007
JBrowse link
G Parl presenilin associated, rhomboid-like IAGP MGI PMID:16839884 NCBI chr16:20,098,570...20,121,090
Ensembl chr16:20,098,568...20,121,137
JBrowse link
G Pax3 paired box 3 IAGP MGI PMID:15520281 NCBI chr 1:78,077,904...78,173,773
Ensembl chr 1:78,077,904...78,173,771
JBrowse link
G Pax7 paired box 7 IAGP MGI PMID:15520281 PMID:21828093 NCBI chr 4:139,464,357...139,560,841
Ensembl chr 4:139,464,373...139,560,839
JBrowse link
G Pcsk1 proprotein convertase subtilisin/kexin type 1 IAGP MGI PMID:16644867 NCBI chr13:75,237,407...75,282,980
Ensembl chr13:75,237,945...75,282,980
JBrowse link
G Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha IAGP MGI PMID:16625210 NCBI chr 3:32,451,203...32,520,256
Ensembl chr 3:32,451,820...32,522,635
JBrowse link
G Plec plectin IAGP MGI PMID:18490514 NCBI chr15:76,055,174...76,115,578
Ensembl chr15:76,055,174...76,116,774
JBrowse link
G Polg polymerase (DNA directed), gamma IAGP MGI PMID:16020738 NCBI chr 7:79,095,979...79,117,659
Ensembl chr 7:79,095,979...79,116,110
JBrowse link
G Ppard peroxisome proliferator activator receptor delta IAGP MGI PMID:25279796 NCBI chr17:28,451,715...28,520,446
Ensembl chr17:28,451,674...28,520,448
JBrowse link
G Pus1 pseudouridine synthase 1 IAGP MGI PMID:27197761 NCBI chr 5:110,921,533...110,928,523
Ensembl chr 5:110,921,533...110,928,525
JBrowse link
G Rb1 RB transcriptional corepressor 1 IAGP MGI PMID:8957005 NCBI chr14:73,430,298...73,563,446
Ensembl chr14:73,421,113...73,563,262
JBrowse link
G Ryr1 ryanodine receptor 1, skeletal muscle IAGP MGI PMID:18003898 NCBI chr 7:28,702,765...28,824,599
Ensembl chr 7:28,702,769...28,824,604
JBrowse link
G Scyl1 SCY1-like 1 (S. cerevisiae) IEA MGI NCBI chr19:5,808,450...5,821,461
Ensembl chr19:5,808,379...5,821,447
JBrowse link
G Sec61a1 SEC61 translocon subunit alpha 1 IAGP MGI PMID:19934005 NCBI chr 6:88,480,589...88,495,782
Ensembl chr 6:88,480,561...88,495,887
JBrowse link
G Selenon selenoprotein N IAGP MGI PMID:21858002 NCBI chr 4:134,265,203...134,279,477
Ensembl chr 4:134,265,203...134,279,477
JBrowse link
G Six1 sine oculis-related homeobox 1 IAGP MGI PMID:12668636 PMID:14695375 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link
G Ski ski sarcoma viral oncogene homolog (avian) IAGP MGI PMID:9284043 NCBI chr 4:155,238,532...155,307,536
Ensembl chr 4:155,238,532...155,307,049
JBrowse link
G Slc2a4 solute carrier family 2 (facilitated glucose transporter), member 4 IAGP MGI PMID:11788366 NCBI chr11:69,833,112...69,839,040
Ensembl chr11:69,833,365...69,839,014
JBrowse link
G Sod2 superoxide dismutase 2, mitochondrial IAGP MGI PMID:8790408 NCBI chr17:13,226,726...13,237,006
Ensembl chr17:13,225,733...13,258,950
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 IAGP MGI PMID:20215352 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
G Spin1 spindlin 1 IAGP MGI PMID:29168801 NCBI chr13:51,254,523...51,306,588
Ensembl chr13:51,254,916...51,306,582
JBrowse link
G Srf serum response factor IAGP MGI PMID:15647354 NCBI chr17:46,857,764...46,869,194
Ensembl chr17:46,859,255...46,867,101
JBrowse link
G Srpk3 serine/arginine-rich protein specific kinase 3 IAGP MGI PMID:16140986 NCBI chr  X:72,818,011...72,822,531
Ensembl chr  X:72,818,011...72,822,531
JBrowse link
G Sspn sarcospan IAGP MGI PMID:22798625 NCBI chr 6:145,860,423...145,910,951
Ensembl chr 6:145,877,367...145,910,949
JBrowse link
G Stac3 SH3 and cysteine rich domain 3 IAGP MGI PMID:23818578 NCBI chr10:127,337,505...127,344,692
Ensembl chr10:127,337,555...127,344,692
JBrowse link
G Supv3l1 suppressor of var1, 3-like 1 (S. cerevisiae) IAGP MGI PMID:19145458 NCBI chr10:62,265,000...62,287,294
Ensembl chr10:62,264,988...62,285,517
JBrowse link
G Synm synemin, intermediate filament protein IAGP MGI PMID:25567810 NCBI chr 7:67,379,909...67,409,490
Ensembl chr 7:67,379,908...67,409,490
JBrowse link
G Tbx15 T-box 15 IAGP MGI PMID:15652702 NCBI chr 3:99,147,671...99,261,576
Ensembl chr 3:99,147,697...99,261,575
JBrowse link
G Traf2 TNF receptor-associated factor 2 IAGP MGI PMID:9390694 NCBI chr 2:25,407,994...25,436,952
Ensembl chr 2:25,407,994...25,436,952
JBrowse link
G Trp53 transformation related protein 53 IAGP MGI PMID:11780111 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699
JBrowse link
G Ubr1 ubiquitin protein ligase E3 component n-recognin 1 IAGP MGI PMID:11689692 NCBI chr 2:120,690,753...120,801,246
Ensembl chr 2:120,690,750...120,801,196
JBrowse link
decreased skeletal muscle size term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col6a1 collagen, type VI, alpha 1 IAGP MGI PMID:28043812 NCBI chr10:76,544,626...76,561,869
Ensembl chr10:76,544,626...76,562,002
JBrowse link
G Hoxc10 homeobox C10 IAGP MGI PMID:19623272 NCBI chr15:102,875,231...102,880,333
Ensembl chr15:102,875,231...102,880,328
JBrowse link
G Lmod3 leiomodin 3 (fetal) IAGP MGI PMID:25774500 NCBI chr 6:97,215,491...97,230,137
Ensembl chr 6:97,215,495...97,229,720
JBrowse link
G Pax7 paired box 7 IAGP MGI PMID:23933088 NCBI chr 4:139,464,357...139,560,841
Ensembl chr 4:139,464,373...139,560,839
JBrowse link
G Synm synemin, intermediate filament protein IAGP MGI PMID:25567810 NCBI chr 7:67,379,909...67,409,490
Ensembl chr 7:67,379,908...67,409,490
JBrowse link
decreased skeletal muscle weight term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atad3a ATPase family, AAA domain containing 3A IAGP MGI PMID:29898916 NCBI chr 4:155,825,097...155,845,579
Ensembl chr 4:155,825,098...155,845,550
JBrowse link
G Barx2 BarH-like homeobox 2 IAGP MGI PMID:22076929 NCBI chr 9:31,757,340...31,824,581
Ensembl chr 9:31,757,340...31,824,758
JBrowse link
G Col12a1 collagen, type XII, alpha 1 IAGP MGI PMID:24334604 NCBI chr 9:79,506,269...79,628,423
Ensembl chr 9:79,506,273...79,626,113
JBrowse link
G Col6a3 collagen, type VI, alpha 3 IAGP MGI PMID:23564457 NCBI chr 1:90,694,582...90,771,710
Ensembl chr 1:90,693,645...90,771,693
JBrowse link
G Crppa CDP-L-ribitol pyrophosphorylase A IAGP MGI PMID:35422047 NCBI chr12:36,430,334...36,739,502
Ensembl chr12:36,431,449...36,739,502
JBrowse link
G Dmd dystrophin, muscular dystrophy IAGP MGI PMID:20304955 PMID:20371627 PMID:22279050 NCBI chr  X:81,858,244...84,248,656
Ensembl chr  X:81,992,476...84,249,747
JBrowse link
G Dnm2 dynamin 2 IAGP MGI PMID:32129442 NCBI chr 9:21,336,167...21,419,055
Ensembl chr 9:21,336,204...21,419,055
JBrowse link
G Dusp1 dual specificity phosphatase 1 IAGP MGI PMID:20371627 NCBI chr17:26,724,565...26,727,446
Ensembl chr17:26,724,564...26,781,102
JBrowse link
G Efemp1 epidermal growth factor-containing fibulin-like extracellular matrix protein 1 IAGP MGI PMID:17872905 NCBI chr11:28,803,154...28,876,743
Ensembl chr11:28,803,204...28,876,743
JBrowse link
G Fktn fukutin IAGP MGI PMID:23562821 NCBI chr 4:53,713,745...53,765,785
Ensembl chr 4:53,713,998...53,777,890
JBrowse link
G Fst follistatin IAGP MGI PMID:20810712 NCBI chr13:114,588,798...114,595,522
Ensembl chr13:114,588,826...114,595,487
JBrowse link
G Fstl3 follistatin-like 3 IAGP MGI PMID:20810712 NCBI chr10:79,613,108...79,618,464
Ensembl chr10:79,613,106...79,618,464
JBrowse link
G Hoxc10 homeobox C10 IAGP MGI PMID:19623272 NCBI chr15:102,875,231...102,880,333
Ensembl chr15:102,875,231...102,880,328
JBrowse link
G Ighmbp2 immunoglobulin mu DNA binding protein 2 IAGP MGI PMID:36413117 NCBI chr19:3,309,076...3,333,011
Ensembl chr19:3,309,076...3,333,017
JBrowse link
G Il13 interleukin 13 IAGP MGI PMID:24565845 NCBI chr11:53,522,150...53,525,529
Ensembl chr11:53,522,151...53,525,529
JBrowse link
G Magel2 MAGE family member L2 IAGP MGI PMID:27436578 NCBI chr 7:62,026,727...62,031,388
Ensembl chr 7:62,026,758...62,031,388
JBrowse link
G Mamstr MEF2 activating motif and SAP domain containing transcriptional regulator IAGP MGI PMID:22279050 NCBI chr 7:45,288,616...45,297,631
Ensembl chr 7:45,289,401...45,295,945
JBrowse link
G Mrtfa myocardin related transcription factor A IAGP MGI PMID:22279050 NCBI chr15:80,896,482...81,074,937
Ensembl chr15:80,896,482...81,074,958
JBrowse link
G Mstn myostatin IAGP MGI PMID:20810712 NCBI chr 1:53,100,799...53,107,238
Ensembl chr 1:53,100,799...53,107,238
JBrowse link
G Mtor mechanistic target of rapamycin kinase IAGP MGI PMID:20388826 NCBI chr 4:148,533,039...148,642,142
Ensembl chr 4:148,533,068...148,642,140
JBrowse link
G Myf5 myogenic factor 5 IAGP MGI PMID:23562821 PMID:35422047 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995
JBrowse link
G Myh3 myosin, heavy polypeptide 3, skeletal muscle, embryonic IAGP MGI PMID:32094117 NCBI chr11:66,969,101...66,993,117
Ensembl chr11:66,969,126...66,993,112
JBrowse link
G Myl1 myosin, light polypeptide 1 IAGP MGI PMID:29898916 NCBI chr 1:66,963,454...66,987,091
Ensembl chr 1:66,963,454...66,984,563
JBrowse link
G Neb nebulin IAGP MGI PMID:26123491 NCBI chr 2:52,026,652...52,228,810
Ensembl chr 2:52,026,659...52,268,486
JBrowse link
G Nos1 nitric oxide synthase 1, neuronal IAGP MGI PMID:18852886 NCBI chr 5:118,004,904...118,096,905
Ensembl chr 5:117,919,097...118,096,905
JBrowse link
G Pax7 paired box 7 IAGP MGI PMID:22869749 NCBI chr 4:139,464,357...139,560,841
Ensembl chr 4:139,464,373...139,560,839
JBrowse link
G Ppargc1a peroxisome proliferative activated receptor, gamma, coactivator 1 alpha IAGP MGI PMID:15760270 NCBI chr 5:51,611,591...52,273,316
Ensembl chr 5:51,611,592...51,725,068
JBrowse link
G Prmt7 protein arginine N-methyltransferase 7 IAGP MGI PMID:26854227 NCBI chr 8:106,937,686...106,978,326
Ensembl chr 8:106,937,568...106,979,426
JBrowse link
G R3hdml R3H domain containing-like IAGP MGI PMID:31524320 NCBI chr 2:163,333,364...163,344,532
Ensembl chr 2:163,334,238...163,344,532
JBrowse link
G Rps6kb1 ribosomal protein S6 kinase, polypeptide 1 IAGP MGI PMID:19794149 NCBI chr11:86,389,695...86,435,711
Ensembl chr11:86,389,697...86,435,631
JBrowse link
G Ryr1 ryanodine receptor 1, skeletal muscle IAGP MGI PMID:31044239 NCBI chr 7:28,702,765...28,824,599
Ensembl chr 7:28,702,769...28,824,604
JBrowse link
G Slc6a6 solute carrier family 6 (neurotransmitter transporter, taurine), member 6 IAGP MGI PMID:18407290 NCBI chr 6:91,661,031...91,736,044
Ensembl chr 6:91,661,034...91,736,047
JBrowse link
G Stim1 stromal interaction molecule 1 IAGP MGI PMID:31666234 NCBI chr 7:101,909,279...102,086,525
Ensembl chr 7:101,917,013...102,086,526
JBrowse link
G Tmem263 transmembrane protein 263 IAGP MGI PMID:38241182 NCBI chr10:84,938,491...84,953,611
Ensembl chr10:84,938,491...84,956,482
JBrowse link
G Wfikkn1 WAP, FS, Ig, KU, and NTR-containing protein 1 IAGP MGI PMID:24019467 NCBI chr17:26,096,602...26,099,832
Ensembl chr17:26,096,602...26,099,832
JBrowse link
G Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 IAGP MGI PMID:24019467 NCBI chr11:94,126,777...94,138,613
Ensembl chr11:94,126,782...94,136,831
JBrowse link
facial muscle atrophy term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acta1 actin alpha 1, skeletal muscle IAGP MGI PMID:22067542 NCBI chr 8:124,618,497...124,621,514
Ensembl chr 8:124,618,508...124,621,490
JBrowse link
G Hoxb2 homeobox B2 IAGP MGI PMID:9012503 NCBI chr11:96,242,458...96,244,846
Ensembl chr11:96,241,351...96,244,838
JBrowse link
G Vps54 VPS54 GARP complex subunit IAGP MGI PMID:5709840 NCBI chr11:21,189,032...21,271,133
Ensembl chr11:21,189,281...21,271,136
JBrowse link
facial muscle hypoplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:21364285 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Six1 sine oculis-related homeobox 1 IAGP MGI PMID:21364285 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link
orbicularis oculi muscle hypoplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgfa transforming growth factor alpha IAGP MGI PMID:8477445 NCBI chr 6:86,172,020...86,252,726
Ensembl chr 6:86,172,205...86,252,701
JBrowse link
skeletal muscle atrophy term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Agrn agrin IAGP MGI PMID:21890498 NCBI chr 4:156,249,747...156,281,997
Ensembl chr 4:156,249,747...156,281,945
JBrowse link
G Ark2c arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C IAGP MGI PMID:23610558 NCBI chr18:77,543,806...77,652,832
Ensembl chr18:77,543,806...77,652,857
JBrowse link
G Atl1 atlastin GTPase 1 IAGP MGI PMID:35348668 NCBI chr12:69,939,879...70,010,859
Ensembl chr12:69,939,388...70,013,191
JBrowse link
G B4gat1 beta-1,4-glucuronyltransferase 1 IAGP MGI PMID:23217742 NCBI chr19:5,088,854...5,091,162
Ensembl chr19:5,088,854...5,091,159
Ensembl chr19:5,088,854...5,091,159
JBrowse link
G Cfap276 cilia and flagella associated protein 276 IAGP MGI PMID:31199454 NCBI chr 3:108,444,900...108,452,013
Ensembl chr 3:108,441,466...108,452,039
JBrowse link
G Chat choline O-acetyltransferase IAGP MGI PMID:19635813 NCBI chr14:32,130,160...32,187,866
Ensembl chr14:32,130,160...32,187,946
JBrowse link
G Chrne cholinergic receptor, nicotinic, epsilon polypeptide IAGP MGI PMID:8917583 PMID:9362465 NCBI chr11:70,505,709...70,510,074
Ensembl chr11:70,505,709...70,510,042
JBrowse link
G Clcc1 chloride channel CLIC-like 1 IAGP MGI PMID:25698737 NCBI chr 3:108,561,194...108,586,156
Ensembl chr 3:108,561,229...108,586,156
JBrowse link
G Clp1 CLP1, cleavage and polyadenylation factor I subunit IAGP MGI PMID:23474986 NCBI chr 2:84,553,466...84,557,631
Ensembl chr 2:84,552,448...84,557,694
JBrowse link
G Dctn1 dynactin 1 IAGP MGI PMID:29490687 NCBI chr 6:83,142,702...83,177,103
Ensembl chr 6:83,142,902...83,177,099
JBrowse link
G Dmd dystrophin, muscular dystrophy IAGP MGI PMID:26566673 NCBI chr  X:81,858,244...84,248,656
Ensembl chr  X:81,992,476...84,249,747
JBrowse link
G Dnajb4 DnaJ heat shock protein family (Hsp40) member B4 IAGP MGI PMID:36512060 NCBI chr 3:151,887,217...151,915,720
Ensembl chr 3:151,884,148...151,915,939
JBrowse link
G Fat1 FAT atypical cadherin 1 IAGP MGI PMID:23785297 NCBI chr 8:45,386,137...45,505,294
Ensembl chr 8:45,388,484...45,505,294
JBrowse link
G Fktn fukutin IAGP MGI PMID:23562821 NCBI chr 4:53,713,745...53,765,785
Ensembl chr 4:53,713,998...53,777,890
JBrowse link
G Gars1 glycyl-tRNA synthetase 1 IAGP MGI PMID:28355569 NCBI chr 6:55,014,986...55,056,489
Ensembl chr 6:55,014,992...55,056,485
JBrowse link
G Grpel1 GrpE-like 1, mitochondrial IAGP MGI PMID:36198903 NCBI chr 5:36,622,529...36,631,421
Ensembl chr 5:36,622,342...36,631,424
JBrowse link
G H6pd hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) IAGP MGI PMID:21106871 NCBI chr 4:150,063,931...150,093,480
Ensembl chr 4:150,063,932...150,093,480
JBrowse link
G Hat1 histone aminotransferase 1 IAGP MGI PMID:31290578 NCBI chr 2:71,219,604...71,271,966
Ensembl chr 2:71,219,302...71,271,966
JBrowse link
G Hoxc10 homeobox C10 IAGP MGI PMID:19623272 NCBI chr15:102,875,231...102,880,333
Ensembl chr15:102,875,231...102,880,328
JBrowse link
G Hsd11b1 hydroxysteroid 11-beta dehydrogenase 1 IAGP MGI PMID:21106871 NCBI chr 1:192,903,917...192,946,345
Ensembl chr 1:192,903,942...192,946,383
JBrowse link
G Itga7 integrin alpha 7 IAGP MGI PMID:22798625 NCBI chr10:128,769,633...128,794,155
Ensembl chr10:128,769,645...128,794,155
JBrowse link
G Magel2 MAGE family member L2 IAGP MGI PMID:27436578 NCBI chr 7:62,026,727...62,031,388
Ensembl chr 7:62,026,758...62,031,388
JBrowse link
G Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 IAGP MGI PMID:28040732 NCBI chr12:66,512,832...67,269,323
Ensembl chr12:66,512,834...67,269,323
JBrowse link
G Mir206 microRNA 206 IAGP MGI PMID:20007902 NCBI chr 1:20,749,234...20,749,306
Ensembl chr 1:20,749,234...20,749,306
JBrowse link
G Morc2a microrchidia 2A IAGP MGI PMID:34695197 NCBI chr11:3,599,132...3,640,477
Ensembl chr11:3,599,191...3,640,477
JBrowse link
G Mtm1 X-linked myotubular myopathy gene 1 IAGP MGI PMID:22068590 NCBI chr  X:70,254,373...70,359,019
Ensembl chr  X:70,254,373...70,359,297
JBrowse link
G Myf5 myogenic factor 5 IAGP MGI PMID:23562821 NCBI chr10:107,318,769...107,322,787
Ensembl chr10:107,318,769...107,321,995
JBrowse link
G Myhas myosin heavy chain gene antisense RNA IAGP MGI PMID:28281528 NCBI chr11:67,115,022...67,128,107
Ensembl chr11:67,102,082...67,128,399
JBrowse link
G Ndnf neuron-derived neurotrophic factor IAGP MGI PMID:35051783 NCBI chr 6:65,648,595...65,689,307
Ensembl chr 6:65,648,574...65,689,310
JBrowse link
G Ndrg1 N-myc downstream regulated gene 1 IAGP MGI PMID:21303696 NCBI chr15:66,801,167...66,841,490
Ensembl chr15:66,801,167...66,841,489
JBrowse link
G Notch3 notch 3 IEA MGI NCBI chr17:32,339,794...32,385,869
Ensembl chr17:32,339,794...32,385,826
JBrowse link
G Pabpn1 poly(A) binding protein, nuclear 1 IAGP MGI PMID:28575395 NCBI chr14:55,131,600...55,136,384
Ensembl chr14:55,129,957...55,135,626
JBrowse link
G Pla2g6 phospholipase A2, group VI IAGP MGI PMID:19893029 NCBI chr15:79,170,428...79,212,915
Ensembl chr15:79,170,428...79,212,590
JBrowse link
G Rb1 RB transcriptional corepressor 1 IAGP MGI PMID:24662053 NCBI chr14:73,430,298...73,563,446
Ensembl chr14:73,421,113...73,563,262
JBrowse link
G Reep1 receptor accessory protein 1 IAGP MGI PMID:35348668 NCBI chr 6:71,684,413...71,787,694
Ensembl chr 6:71,684,545...71,787,694
JBrowse link
G Rrm2b ribonucleotide reductase M2 B (TP53 inducible) IAGP MGI PMID:12858174 NCBI chr15:37,924,196...37,961,562
Ensembl chr15:37,924,196...37,961,562
JBrowse link
G Scn4a sodium channel, voltage-gated, type IV, alpha IAGP MGI PMID:18317596 NCBI chr11:106,208,374...106,256,385
Ensembl chr11:106,209,418...106,244,114
JBrowse link
G Scn8a sodium channel, voltage-gated, type VIII, alpha IAGP MGI PMID:28355569 NCBI chr15:100,766,600...100,943,819
Ensembl chr15:100,767,739...100,943,819
JBrowse link
G Scyl1 SCY1-like 1 (S. cerevisiae) IAGP MGI PMID:29437892 NCBI chr19:5,808,450...5,821,461
Ensembl chr19:5,808,379...5,821,447
JBrowse link
G Selenon selenoprotein N IAGP MGI PMID:21131290 PMID:21858002 NCBI chr 4:134,265,203...134,279,477
Ensembl chr 4:134,265,203...134,279,477
JBrowse link
G Slc18a3 solute carrier family 18 (vesicular monoamine), member 3 IAGP MGI PMID:19635813 NCBI chr14:32,184,394...32,186,807
Ensembl chr14:32,184,395...32,186,807
JBrowse link
G Smad9 SMAD family member 9 IAGP MGI PMID:23610558 NCBI chr 3:54,662,873...54,709,162
Ensembl chr 3:54,663,003...54,708,678
JBrowse link
G Sspn sarcospan IAGP MGI PMID:22798625 NCBI chr 6:145,860,423...145,910,951
Ensembl chr 6:145,877,367...145,910,949
JBrowse link
G Tardbp TAR DNA binding protein IAGP MGI PMID:31964415 NCBI chr 4:148,696,839...148,711,672
Ensembl chr 4:148,696,839...148,711,476
JBrowse link
G Zfp106 zinc finger protein 106 IAGP MGI PMID:26604141 NCBI chr 2:120,337,303...120,394,345
Ensembl chr 2:120,337,301...120,394,324
JBrowse link
skeletal muscle fiber atrophy term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adarb1 adenosine deaminase, RNA-specific, B1 IAGP MGI PMID:20826656 NCBI chr10:77,126,561...77,254,125
Ensembl chr10:77,126,560...77,254,104
JBrowse link
G Als2 alsin Rho guanine nucleotide exchange factor IAGP MGI PMID:16321985 NCBI chr 1:59,201,915...59,276,390
Ensembl chr 1:59,202,085...59,276,390
JBrowse link
G Ar androgen receptor IAGP MGI PMID:16981011 NCBI chr  X:97,192,363...97,366,824
Ensembl chr  X:97,192,375...97,366,821
JBrowse link
G Asah1 N-acylsphingosine amidohydrolase 1 IAGP MGI PMID:29908121 NCBI chr 8:41,793,683...41,850,681
Ensembl chr 8:41,793,234...41,827,810
JBrowse link
G Atad3a ATPase family, AAA domain containing 3A IAGP MGI PMID:29898916 NCBI chr 4:155,825,097...155,845,579
Ensembl chr 4:155,825,098...155,845,550
JBrowse link
G Barx2 BarH-like homeobox 2 IAGP MGI PMID:22076929 NCBI chr 9:31,757,340...31,824,581
Ensembl chr 9:31,757,340...31,824,758
JBrowse link
G Bub1b BUB1B, mitotic checkpoint serine/threonine kinase IAGP MGI PMID:31738183 NCBI chr 2:118,428,684...118,472,073
Ensembl chr 2:118,428,692...118,472,072
JBrowse link
G Cfap276 cilia and flagella associated protein 276 IAGP MGI PMID:32592472 NCBI chr 3:108,444,900...108,452,013
Ensembl chr 3:108,441,466...108,452,039
JBrowse link
G Chat choline O-acetyltransferase IAGP MGI PMID:19635813 NCBI chr14:32,130,160...32,187,866
Ensembl chr14:32,130,160...32,187,946
JBrowse link
G Clcc1 chloride channel CLIC-like 1 IAGP MGI PMID:25698737 NCBI chr 3:108,561,194...108,586,156
Ensembl chr 3:108,561,229...108,586,156
JBrowse link
G Col13a1 collagen, type XIII, alpha 1 IAGP MGI PMID:28369367 NCBI chr10:61,674,013...61,814,985
Ensembl chr10:61,674,015...61,814,887
JBrowse link
G Des desmin IAGP MGI PMID:18490514 NCBI chr 1:75,336,936...75,345,223
Ensembl chr 1:75,336,973...75,345,223
JBrowse link
G Dmd dystrophin, muscular dystrophy IAGP MGI PMID:26566673 NCBI chr  X:81,858,244...84,248,656
Ensembl chr  X:81,992,476...84,249,747
JBrowse link
G Gfpt1 glutamine fructose-6-phosphate transaminase 1 IAGP MGI PMID:29905857 NCBI chr 6:87,019,828...87,069,189
Ensembl chr 6:87,019,828...87,069,179
JBrowse link
G Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase IAGP MGI PMID:17164266 NCBI chr 4:44,034,075...44,084,177
Ensembl chr 4:44,034,075...44,084,177
JBrowse link
G Grm7 glutamate receptor, metabotropic 7 IAGP MGI PMID:15703193 NCBI chr 6:110,622,304...111,544,191
Ensembl chr 6:110,622,542...111,544,191
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:27907123 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Ighmbp2 immunoglobulin mu DNA binding protein 2 IAGP MGI PMID:15069027 PMID:36413117 NCBI chr19:3,309,076...3,333,011
Ensembl chr19:3,309,076...3,333,017
JBrowse link
G Itga7 integrin alpha 7 IAGP MGI PMID:9354797 NCBI chr10:128,769,633...128,794,155
Ensembl chr10:128,769,645...128,794,155
JBrowse link
G Lamc1 laminin, gamma 1 IAGP MGI PMID:22767514 NCBI chr 1:153,094,668...153,208,532
Ensembl chr 1:153,094,668...153,208,532
JBrowse link
G Ldb3 LIM domain binding 3 IAGP MGI PMID:12499364 NCBI chr14:34,248,656...34,312,276
Ensembl chr14:34,248,560...34,310,639
JBrowse link
G Lmod3 leiomodin 3 (fetal) IAGP MGI PMID:26035871 NCBI chr 6:97,215,491...97,230,137
Ensembl chr 6:97,215,495...97,229,720
JBrowse link
G Lpin1 lipin 1 IAGP MGI PMID:19793967 NCBI chr12:16,585,670...16,697,020
Ensembl chr12:16,585,670...16,696,967
JBrowse link
G Morc2a microrchidia 2A IAGP MGI PMID:34695197 NCBI chr11:3,599,132...3,640,477
Ensembl chr11:3,599,191...3,640,477
JBrowse link
G Mtm1 X-linked myotubular myopathy gene 1 IAGP MGI PMID:12391329 NCBI chr  X:70,254,373...70,359,019
Ensembl chr  X:70,254,373...70,359,297
JBrowse link
G Myh4 myosin, heavy polypeptide 4, skeletal muscle IAGP MGI PMID:11171584 NCBI chr11:67,128,638...67,151,273
Ensembl chr11:67,128,855...67,151,272
JBrowse link
G Myl1 myosin, light polypeptide 1 IAGP MGI PMID:29898916 NCBI chr 1:66,963,454...66,987,091
Ensembl chr 1:66,963,454...66,984,563
JBrowse link
G Nrcam neuronal cell adhesion molecule IAGP MGI PMID:19793967 NCBI chr12:44,375,568...44,651,977
Ensembl chr12:44,375,668...44,648,747
JBrowse link
G Plaa phospholipase A2, activating protein IAGP MGI PMID:28413018 NCBI chr 4:94,453,371...94,491,410
Ensembl chr 4:94,455,751...94,491,481
JBrowse link
G Plec plectin IAGP MGI PMID:18490514 NCBI chr15:76,055,174...76,115,578
Ensembl chr15:76,055,174...76,116,774
JBrowse link
G Slc18a3 solute carrier family 18 (vesicular monoamine), member 3 IAGP MGI PMID:19635813 NCBI chr14:32,184,394...32,186,807
Ensembl chr14:32,184,395...32,186,807
JBrowse link
G Slc6a8 solute carrier family 6 (neurotransmitter transporter, creatine), member 8 IAGP MGI PMID:30013483 NCBI chr  X:72,716,739...72,726,108
Ensembl chr  X:72,716,756...72,726,108
JBrowse link
G Smn1 survival motor neuron 1 IAGP MGI PMID:15703193 NCBI chr13:100,259,713...100,274,206
Ensembl chr13:100,261,360...100,274,198
JBrowse link
G Tcap titin-cap IAGP MGI PMID:20233748 NCBI chr11:98,274,637...98,275,779
Ensembl chr11:98,274,637...98,275,779
JBrowse link
G Tnnt1 troponin T1, skeletal, slow IAGP MGI PMID:24445317 NCBI chr 7:4,507,568...4,518,974
Ensembl chr 7:4,507,569...4,519,381
JBrowse link
G Ttn titin IAGP MGI PMID:24470489 NCBI chr 2:76,534,324...76,812,901
Ensembl chr 2:76,534,324...76,812,891
JBrowse link
G Ttpa tocopherol (alpha) transfer protein IAGP MGI PMID:11752462 NCBI chr 4:20,007,889...20,030,823
Ensembl chr 4:20,007,938...20,030,785
JBrowse link
G Vapb vesicle-associated membrane protein, associated protein B and C IAGP MGI PMID:26362257 NCBI chr 2:173,579,378...173,626,132
Ensembl chr 2:173,579,304...173,626,132
JBrowse link
G Vegfa vascular endothelial growth factor A IAGP MGI PMID:11381259 NCBI chr17:46,327,919...46,343,303
Ensembl chr17:46,327,919...46,343,295
JBrowse link
G Wasf1 WASP family, member 1 IAGP MGI PMID:12716942 NCBI chr10:40,759,476...40,814,565
Ensembl chr10:40,759,471...40,814,566
JBrowse link
G Zfp106 zinc finger protein 106 IAGP MGI PMID:26604141 PMID:28072389 NCBI chr 2:120,337,303...120,394,345
Ensembl chr 2:120,337,301...120,394,324
JBrowse link
skeletal muscle hypoplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cacna2d2 calcium channel, voltage-dependent, alpha 2/delta subunit 2 IAGP MGI PMID:4177347 NCBI chr 9:107,276,948...107,406,545
Ensembl chr 9:107,276,811...107,406,542
JBrowse link
G Nf1 neurofibromin 1 IAGP MGI PMID:7926784 NCBI chr11:79,223,541...79,472,435
Ensembl chr11:79,230,519...79,472,438
JBrowse link
skeletal muscle hypotrophy term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Insr insulin receptor IAGP MGI PMID:8612577 NCBI chr 8:3,200,922...3,329,649
Ensembl chr 8:3,172,061...3,329,617
JBrowse link
tongue muscle hypoplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:21364285 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 IAGP MGI PMID:28077597 NCBI chr15:103,148,840...103,155,119
Ensembl chr15:103,148,859...103,155,119
JBrowse link
G Six1 sine oculis-related homeobox 1 IAGP MGI PMID:21364285 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16965
    muscle phenotype 1977
      abnormal muscle morphology 1459
        abnormal skeletal muscle morphology 658
          abnormal skeletal muscle mass 205
            decreased skeletal muscle mass 178
              decreased skeletal muscle size + 116
paths to the root