Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:absent oocytes
go back to main search page
Accession:MP:0004805 term browser browse the term
Definition:absence of mature germ cells in the female


show annotations for term's descendants           Sort by:
absent oocytes term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G 1700028K03Rik RIKEN cDNA 1700028K03 gene IAGP MGI PMID:30949703 NCBI chr 5:107,682,586...107,699,415
Ensembl chr 5:107,655,487...107,728,462
Ensembl chr 5:107,655,487...107,728,462 		JBrowse link
G 4930447C04Rik RIKEN cDNA 4930447C04 gene IAGP MGI PMID:27796301 NCBI chr12:72,926,967...72,964,742
Ensembl chr12:72,927,883...72,987,548 		JBrowse link
G Amhr2 anti-Mullerian hormone type 2 receptor IAGP MGI PMID:17609433 NCBI chr15:102,353,437...102,363,075
Ensembl chr15:102,353,802...102,363,068 		JBrowse link
G Atm ataxia telangiectasia mutated IAGP MGI PMID:8689683 PMID:8843194 NCBI chr 9:53,348,422...53,448,125
Ensembl chr 9:53,350,449...53,448,040 		JBrowse link
G Atr ataxia telangiectasia and Rad3 related IAGP MGI PMID:19620979 NCBI chr 9:95,739,655...95,834,813
Ensembl chr 9:95,739,650...95,833,834 		JBrowse link
G Bcl2 B cell leukemia/lymphoma 2 IAGP MGI PMID:7628407 NCBI chr 1:106,465,906...106,642,020
Ensembl chr 1:106,465,908...106,642,004 		JBrowse link
G Bmp15 bone morphogenetic protein 15 IAGP MGI PMID:11376106 NCBI chr  X:6,226,108...6,232,778
Ensembl chr  X:6,226,161...6,232,775 		JBrowse link
G Cdk1 cyclin dependent kinase 1 IAGP MGI PMID:18787066 NCBI chr10:69,170,976...69,188,742
Ensembl chr10:69,170,976...69,188,768 		JBrowse link
G Cdk2 cyclin dependent kinase 2 IAGP MGI PMID:14561402 PMID:18787066 NCBI chr10:128,533,807...128,540,920
Ensembl chr10:128,533,808...128,540,900 		JBrowse link
G Dcaf13 DDB1 and CUL4 associated factor 13 IAGP MGI PMID:30283081 NCBI chr15:38,976,300...39,010,251
Ensembl chr15:38,976,260...39,010,251 		JBrowse link
G Ddx6 DEAD-box helicase 6 IAGP MGI PMID:31657143 NCBI chr 9:44,514,113...44,552,028
Ensembl chr 9:44,516,189...44,552,028 		JBrowse link
G Dmc1 DNA meiotic recombinase 1 IAGP MGI PMID:9660953 PMID:9660954 PMID:22549958 NCBI chr15:79,445,698...79,489,362
Ensembl chr15:79,445,698...79,489,310 		JBrowse link
G Elavl2 ELAV like RNA binding protein 1 IAGP MGI PMID:31657143 NCBI chr 4:91,099,770...91,288,407
Ensembl chr 4:91,139,000...91,289,022 		JBrowse link
G Firrm FIGNL1 interacting regulator of recombination and mitosis IAGP MGI PMID:37439366 NCBI chr 1:163,773,409...163,822,377
Ensembl chr 1:163,773,562...163,822,365 		JBrowse link
G Fshr follicle stimulating hormone receptor IAGP MGI PMID:12135868 NCBI chr17:89,292,380...89,508,103
Ensembl chr17:89,292,380...89,508,103 		JBrowse link
G Gdf9 growth differentiation factor 9 IAGP MGI PMID:11376106 NCBI chr11:53,321,773...53,328,731
Ensembl chr11:53,321,850...53,328,731 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:20005806 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,055,336 		JBrowse link
G Hormad2 HORMA domain containing 2 IAGP MGI PMID:22549958 NCBI chr11:4,295,801...4,391,215
Ensembl chr11:4,295,814...4,391,105 		JBrowse link
G Inhba inhibin beta-A IAGP MGI PMID:17609433 NCBI chr13:16,178,841...16,206,194
Ensembl chr13:16,186,436...16,206,206 		JBrowse link
G Inhbb inhibin beta-B IAGP MGI PMID:17609433 NCBI chr 1:119,343,193...119,349,978
Ensembl chr 1:119,343,195...119,349,978 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IAGP MGI PMID:16061643 NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382 		JBrowse link
G Lhx8 LIM homeobox protein 8 IAGP MGI PMID:18509161 NCBI chr 3:154,011,925...154,036,190
Ensembl chr 3:154,011,931...154,036,296 		JBrowse link
G Majin membrane anchored junction protein IAGP MGI PMID:34326397 NCBI chr19:6,234,358...6,274,349
Ensembl chr19:6,234,418...6,274,255 		JBrowse link
G Mcmdc2 minichromosome maintenance domain containing 2 IAGP MGI PMID:27760146 NCBI chr 1:9,978,863...10,011,179
Ensembl chr 1:9,978,863...10,012,310 		JBrowse link
G Meiob meiosis specific with OB domains IAGP MGI PMID:24068956 NCBI chr17:25,023,275...25,058,762
Ensembl chr17:25,023,263...25,058,762 		JBrowse link
G Meioc meiosis specific with coiled-coil domain IAGP MGI PMID:26742488 NCBI chr11:102,556,177...102,573,066
Ensembl chr11:102,554,542...102,573,063 		JBrowse link
G Morc2b microrchidia 2B IAGP MGI PMID:29329290 NCBI chr17:33,354,562...33,369,473
Ensembl chr17:33,332,325...33,358,657 		JBrowse link
G Msh5 mutS homolog 5 IAGP MGI PMID:10072381 PMID:28175301 NCBI chr17:35,247,581...35,267,842
Ensembl chr17:35,247,581...35,265,721 		JBrowse link
G mt-Tk tRNA lysine, mitochondrial IAGP MGI PMID:24510903 NCBI chr MT:7,700...7,764
Ensembl chr MT:7,700...7,764 		JBrowse link
G Nbn nibrin IAGP MGI PMID:11889050 NCBI chr 4:15,955,388...15,992,589
Ensembl chr 4:15,957,925...15,992,589 		JBrowse link
G Nobox NOBOX oogenesis homeobox IAGP MGI PMID:15326356 NCBI chr 6:43,280,608...43,287,006
Ensembl chr 6:43,280,608...43,286,488 		JBrowse link
G Prdm1 PR domain containing 1, with ZNF domain IAGP MGI PMID:19737919 NCBI chr10:44,313,170...44,404,579
Ensembl chr10:44,313,173...44,404,497 		JBrowse link
G Rad21l RAD21-like (S. pombe) IAGP MGI PMID:24589552 NCBI chr 2:151,486,286...151,512,542
Ensembl chr 2:151,487,324...151,510,453 		JBrowse link
G Rbm46 RNA binding motif protein 46 IAGP MGI PMID:36129965 NCBI chr 3:82,743,828...82,783,828
Ensembl chr 3:82,744,535...82,783,790 		JBrowse link
G Rec8 REC8 meiotic recombination protein IAGP MGI PMID:15935783 NCBI chr14:55,855,459...55,862,852
Ensembl chr14:55,855,494...55,862,852 		JBrowse link
G Rps26 ribosomal protein S26 IAGP MGI PMID:30451825 NCBI chr10:128,460,398...128,462,375
Ensembl chr10:128,460,403...128,462,616 		JBrowse link
G Slx4 SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) IAGP MGI PMID:21240276 NCBI chr16:3,796,969...3,821,708
Ensembl chr16:3,796,969...3,821,634 		JBrowse link
G Sohlh1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 IAGP MGI PMID:16690745 NCBI chr 2:25,733,007...25,737,347
Ensembl chr 2:25,733,007...25,737,260 		JBrowse link
G Spata22 spermatogenesis associated 22 IAGP MGI PMID:22011390 PMID:28297563 NCBI chr11:73,217,416...73,237,447
Ensembl chr11:73,220,567...73,236,870 		JBrowse link
G Spo11 SPO11 initiator of meiotic double stranded breaks IAGP MGI PMID:26742488 NCBI chr 2:172,819,172...172,835,369
Ensembl chr 2:172,819,493...172,835,369 		JBrowse link
G Stag3 STAG3 cohesin complex component IEA MGI NCBI chr 5:138,270,757...138,310,659
Ensembl chr 5:138,278,502...138,310,655 		JBrowse link
G Stra8 stimulated by retinoic acid gene 8 IAGP MGI PMID:18799790 PMID:37439366 NCBI chr 6:34,897,098...34,916,279
Ensembl chr 6:34,897,098...34,916,279 		JBrowse link
G Sun1 Sad1 and UNC84 domain containing 1 IAGP MGI PMID:17543860 PMID:19211677 NCBI chr 5:139,186,313...139,235,594
Ensembl chr 5:139,186,392...139,235,595 		JBrowse link
G Syce1 synaptonemal complex central element protein 1 IAGP MGI PMID:32402064 NCBI chr 7:140,357,142...140,367,767
Ensembl chr 7:140,357,142...140,367,765 		JBrowse link
G Terb1 telomere repeat binding bouquet formation protein 1 IAGP MGI PMID:24413433 NCBI chr 8:105,173,350...105,236,692
Ensembl chr 8:105,173,351...105,236,542 		JBrowse link
G Trim37 tripartite motif-containing 37 IAGP MGI PMID:27044324 NCBI chr11:87,017,675...87,141,700
Ensembl chr11:87,017,903...87,111,509 		JBrowse link
G Wdr62 WD repeat domain 62 IAGP MGI PMID:34059773 NCBI chr 7:29,939,563...29,980,243
Ensembl chr 7:29,939,563...29,979,844 		JBrowse link
G Ythdc1 YTH domain containing 1 IAGP MGI PMID:29799838 NCBI chr 5:86,951,349...86,984,518
Ensembl chr 5:86,952,080...86,984,518 		JBrowse link
G Zcwpw1 zinc finger, CW type with PWWP domain 1 IAGP MGI PMID:31453335 NCBI chr 5:137,785,593...137,820,883
Ensembl chr 5:137,786,060...137,820,883 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 17088
    reproductive system phenotype 3471
      abnormal reproductive system morphology 2481
        abnormal gametogenesis 1251
          abnormal germ cell morphology 1091
            abnormal gametes 898
              absent gametes 290
                absent oocytes 49
Path 2
Term Annotations click to browse term
  mammalian phenotype 17088
    reproductive system phenotype 3471
      abnormal reproductive system morphology 2481
        abnormal gametogenesis 1251
          abnormal germ cell morphology 1091
            abnormal female germ cell morphology 182
              abnormal oocyte morphology 171
                abnormal oocyte number 116
                  decreased oocyte number 115
                    absent oocytes 49
paths to the root