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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:lumbar vertebral transformation
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Accession:MP:0004616 term browser browse the term
Definition:homeotic transformation of any lumbar vertebrae to adopt the fate of another vertebrae
Synonyms:exact_synonym: lumbar transitional vertebrae


show annotations for term's descendants           Sort by:
lumbar vertebral transformation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2a activin receptor IIA IAGP MGI PMID:16991118 NCBI chr 2:48,704,121...48,793,276
Ensembl chr 2:48,704,121...48,793,281 		JBrowse link
G Acvr2b activin receptor IIB IAGP MGI PMID:15542835 PMID:16991118 NCBI chr 9:119,231,081...119,271,214
Ensembl chr 9:119,231,184...119,264,061 		JBrowse link
G Asxl2 ASXL transcriptional regulator 2 IAGP MGI PMID:19270745 NCBI chr12:3,476,892...3,560,811
Ensembl chr12:3,476,857...3,556,852 		JBrowse link
G Bmi1 Bmi1 polycomb ring finger oncogene IAGP MGI PMID:7926765 PMID:18366140 NCBI chr 2:18,681,953...18,691,440
Ensembl chr 2:18,681,829...18,691,440 		JBrowse link
G Cdx2 caudal type homeobox 2 IAGP MGI PMID:16396910 NCBI chr 5:147,237,710...147,244,059
Ensembl chr 5:147,237,615...147,244,080 		JBrowse link
G Cdx4 caudal type homeobox 4 IAGP MGI PMID:16396910 NCBI chr  X:102,365,004...102,373,830
Ensembl chr  X:102,365,004...102,374,198 		JBrowse link
G Dnmt3b DNA methyltransferase 3B IAGP MGI PMID:20439742 NCBI chr 2:153,491,332...153,529,650
Ensembl chr 2:153,491,370...153,529,650 		JBrowse link
G E2f6 E2F transcription factor 6 IAGP MGI PMID:12101104 PMID:18366140 NCBI chr12:16,860,932...16,876,753
Ensembl chr12:16,860,964...16,889,743 		JBrowse link
G Fgfr1 fibroblast growth factor receptor 1 IAGP MGI PMID:9694798 PMID:26341559 NCBI chr 8:26,008,808...26,067,819
Ensembl chr 8:26,003,670...26,065,734 		JBrowse link
G Gdf11 growth differentiation factor 11 IAGP MGI PMID:10391213 NCBI chr10:128,716,393...128,727,587
Ensembl chr10:128,718,164...128,727,587 		JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:24091011 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,055,336 		JBrowse link
G Hotair HOX transcript antisense RNA (non-protein coding) IAGP MGI PMID:24075995 NCBI chr15:102,852,497...102,856,381
Ensembl chr15:102,852,494...102,862,817 		JBrowse link
G Hoxa10 homeobox A10 IAGP MGI PMID:7667266 PMID:12869760 NCBI chr 6:52,208,177...52,217,658
Ensembl chr 6:52,208,177...52,217,834 		JBrowse link
G Hoxa5 homeobox A5 IAGP MGI PMID:7901120 NCBI chr 6:52,178,768...52,181,437
Ensembl chr 6:52,178,734...52,181,567 		JBrowse link
G Hoxa9 homeobox A9 IAGP MGI PMID:8625797 PMID:17626057 NCBI chr 6:52,200,077...52,203,169
Ensembl chr 6:52,200,080...52,208,069 		JBrowse link
G Hoxb9 homeobox B9 IAGP MGI PMID:17626057 NCBI chr11:96,162,156...96,167,421
Ensembl chr11:96,162,283...96,167,421 		JBrowse link
G Hoxc homeobox C cluster IAGP MGI PMID:10753520
G Hoxc10 homeobox C10 IAGP MGI PMID:12869760 PMID:19623272 NCBI chr15:102,875,231...102,880,333
Ensembl chr15:102,875,231...102,880,328 		JBrowse link
G Hoxc9 homeobox C9 IAGP MGI PMID:7547473 PMID:17626057 NCBI chr15:102,885,467...102,893,324
Ensembl chr15:102,884,874...102,893,531 		JBrowse link
G Hoxd10 homeobox D10 IAGP MGI PMID:12869760 NCBI chr 2:74,514,617...74,525,450
Ensembl chr 2:74,522,268...74,525,449 		JBrowse link
G Hoxd8 homeobox D8 IAGP MGI PMID:11311170 NCBI chr 2:74,534,973...74,538,277
Ensembl chr 2:74,534,959...74,538,277 		JBrowse link
G Hoxd9 homeobox D9 IAGP MGI PMID:8625797 PMID:17626057 NCBI chr 2:74,528,107...74,530,552
Ensembl chr 2:74,528,071...74,530,552 		JBrowse link
G Kat2a K(lysine) acetyltransferase 2A IAGP MGI PMID:18430026 NCBI chr11:100,595,572...100,603,293
Ensembl chr11:100,595,572...100,603,291 		JBrowse link
G Kmt2a lysine (K)-specific methyltransferase 2A IAGP MGI PMID:7477409 PMID:11536426 NCBI chr 9:44,714,652...44,793,492
Ensembl chr 9:44,714,652...44,792,594 		JBrowse link
G Mir196a-2 microRNA 196a-2 IAGP MGI PMID:26283362 NCBI chr15:102,881,785...102,881,869
Ensembl chr15:102,881,785...102,881,869 		JBrowse link
G Mir196b microRNA 196b IAGP MGI PMID:26283362 NCBI chr 6:52,207,061...52,207,145
Ensembl chr 6:52,207,061...52,207,145 		JBrowse link
G Mtf2 metal response element binding transcription factor 2 IAGP MGI PMID:21059868 NCBI chr 5:108,213,518...108,257,085
Ensembl chr 5:108,213,540...108,256,870 		JBrowse link
G Nacc1 nucleus accumbens associated 1, BEN and BTB (POZ) domain containing IAGP MGI PMID:23922682 NCBI chr 8:85,397,106...85,414,528
Ensembl chr 8:85,397,108...85,414,531 		JBrowse link
G Nbl1 NBL1, DAN family BMP antagonist IAGP MGI PMID:11134349 NCBI chr 4:138,809,602...138,820,437
Ensembl chr 4:138,809,595...138,820,304 		JBrowse link
G Ndrg2 N-myc downstream regulated gene 2 IAGP MGI PMID:22819676 NCBI chr14:52,142,738...52,151,463
Ensembl chr14:52,142,728...52,151,615 		JBrowse link
G Nog noggin IAGP MGI PMID:11134349 NCBI chr11:89,191,464...89,193,385
Ensembl chr11:89,191,464...89,193,158 		JBrowse link
G Pcgf2 polycomb group ring finger 2 IAGP MGI PMID:8625838 PMID:15741318 PMID:21059868 NCBI chr11:97,579,647...97,593,260
Ensembl chr11:97,579,649...97,591,323 		JBrowse link
G Pgap1 post-GPI attachment to proteins 1 IAGP MGI PMID:10529425 NCBI chr 1:54,512,159...54,596,843
Ensembl chr 1:54,512,153...54,596,843 		JBrowse link
G Phc1 polyhomeotic 1 IAGP MGI PMID:9367423 NCBI chr 6:122,294,690...122,317,551
Ensembl chr 6:122,294,690...122,317,520 		JBrowse link
G Phc2 polyhomeotic 2 IAGP MGI PMID:21059868 PMID:24091011 NCBI chr 4:128,548,448...128,646,674
Ensembl chr 4:128,548,495...128,646,674 		JBrowse link
G Pnn pinin IAGP MGI PMID:17654715 NCBI chr12:59,113,705...59,120,803
Ensembl chr12:59,113,670...59,120,784 		JBrowse link
G Psip1 PC4 and SFRS1 interacting protein 1 IAGP MGI PMID:16980622 NCBI chr 4:83,373,917...83,404,700
Ensembl chr 4:83,373,917...83,404,696 		JBrowse link
G Qdpr quinoid dihydropteridine reductase IAGP MGI PMID:17151244 NCBI chr 5:45,591,374...45,607,571
Ensembl chr 5:45,591,363...45,607,578 		JBrowse link
G Rara retinoic acid receptor, alpha IAGP MGI PMID:9240560 NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768 		JBrowse link
G Rarb retinoic acid receptor, beta IAGP MGI PMID:9240560 NCBI chr14:5,387,365...6,038,924
Ensembl chr14:5,650,540...6,038,924 		JBrowse link
G Rpl38 ribosomal protein L38 IAGP MGI PMID:8995757 NCBI chr11:114,558,644...114,563,159
Ensembl chr11:114,559,350...114,563,157 		JBrowse link
G Rps7 ribosomal protein S7 IAGP MGI PMID:23382688 NCBI chr12:28,680,846...28,685,952
Ensembl chr12:28,680,853...28,685,952 		JBrowse link
G Sf3b1 splicing factor 3b, subunit 1 IAGP MGI PMID:15741318 NCBI chr 1:55,024,328...55,066,660
Ensembl chr 1:55,024,328...55,066,640 		JBrowse link
G Sf3b4 splicing factor 3b, subunit 4 IAGP MGI PMID:31900962 NCBI chr 3:96,079,822...96,084,880
Ensembl chr 3:96,079,648...96,084,880 		JBrowse link
G Suz12 SUZ12 polycomb repressive complex 2 subunit IAGP MGI PMID:21059868 NCBI chr11:79,883,932...79,924,949
Ensembl chr11:79,883,932...79,924,949 		JBrowse link
G Tapt1 transmembrane anterior posterior transformation 1 IAGP MGI PMID:17151244 NCBI chr 5:44,332,496...44,384,411
Ensembl chr 5:44,332,496...44,383,968 		JBrowse link
G Tasp1 taspase, threonine aspartase 1 IAGP MGI PMID:16951254 NCBI chr 2:139,675,399...139,908,767
Ensembl chr 2:139,675,400...139,908,725 		JBrowse link
G Tert telomerase reverse transcriptase IAGP MGI PMID:19571879 NCBI chr13:73,775,030...73,797,962
Ensembl chr13:73,775,030...73,797,962 		JBrowse link
G Wnt3a wingless-type MMTV integration site family, member 3A IAGP MGI PMID:11335109 NCBI chr11:59,138,859...59,181,579
Ensembl chr11:59,138,859...59,181,578 		JBrowse link
G Zbtb16 zinc finger and BTB domain containing 16 IAGP MGI PMID:10835630 NCBI chr 9:48,563,097...48,747,525
Ensembl chr 9:48,565,597...48,747,522 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 17088
    skeleton phenotype 3397
      abnormal skeleton morphology 3204
        abnormal axial skeleton morphology 1792
          abnormal vertebral column morphology 995
            abnormal vertebrae morphology 670
              vertebral transformation 126
                lumbar vertebral transformation 50
Path 2
Term Annotations click to browse term
  mammalian phenotype 17088
    skeleton phenotype 3397
      abnormal skeleton morphology 3204
        abnormal axial skeleton morphology 1792
          abnormal vertebral column morphology 995
            abnormal vertebrae morphology 670
              abnormal presacral vertebrae morphology 278
                abnormal lumbar vertebrae morphology 170
                  lumbar vertebral transformation 50
paths to the root