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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal vestibular labyrinth morphology
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Accession:MP:0004427 term browser browse the term
Definition:any structural anomaly in the portion of the membranous labyrinth concerned with the sense of equilibration (vs. the cochlear labyrinth, which is concerned with the sense of hearing) and innervated by the vestibular nerve; it is located within the semicircular canals and vestibule of the bony labyrinth, and consists of the utricle, saccule, and the semicircular, utriculosaccular, and endolymphatic ducts
Synonyms:exact_synonym: abnormal labyrinthus vestibularis;   abnormal vestibular organ morphology



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abnormal vestibular labyrinth morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:10471511 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Hmx3 H6 homeobox 3 IAGP MGI PMID:9435283 NCBI chr 7:131,143,263...131,147,756
Ensembl chr 7:131,144,596...131,146,654
JBrowse link
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 IAGP MGI PMID:15891643 NCBI chr 7:142,660,614...142,980,787
Ensembl chr 7:142,660,099...142,980,779
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha IAGP MGI PMID:23226461 NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310
JBrowse link
G Ntrk2 neurotrophic tyrosine kinase, receptor, type 2 IAGP MGI PMID:15372074 NCBI chr13:58,954,363...59,281,782
Ensembl chr13:58,954,383...59,281,784
JBrowse link
G S1pr2 sphingosine-1-phosphate receptor 2 IAGP MGI PMID:17284444 NCBI chr 9:20,877,248...20,888,089
Ensembl chr 9:20,873,657...20,888,077
JBrowse link
G Slc4a11 solute carrier family 4, sodium bicarbonate transporter-like, member 11 IAGP MGI PMID:19586905 NCBI chr 2:130,526,027...130,539,439
Ensembl chr 2:130,526,033...130,539,439
JBrowse link
G Tbx10 T-box 10 IAGP MGI PMID:5297683 NCBI chr19:4,042,752...4,049,512
Ensembl chr19:4,042,752...4,049,512
JBrowse link
abnormal endolymphatic duct morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bmp4 bone morphogenetic protein 4 IAGP MGI PMID:18404215 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:16916509 PMID:18678597 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 IAGP MGI PMID:10631169 PMID:10934262 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079
JBrowse link
G Foxg1 forkhead box G1 IAGP MGI PMID:16600992 PMID:18404215 PMID:23971992 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
JBrowse link
G Gata3 GATA binding protein 3 IAGP MGI PMID:11135239 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:23971992 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Hmx2 H6 homeobox 2 IAGP MGI PMID:15363417 NCBI chr 7:131,150,486...131,159,743
Ensembl chr 7:131,150,502...131,159,743
JBrowse link
G Hmx3 H6 homeobox 3 IAGP MGI PMID:15363417 NCBI chr 7:131,143,263...131,147,756
Ensembl chr 7:131,144,596...131,146,654
JBrowse link
G Lmo4 LIM domain only 4 IAGP MGI PMID:19913004 NCBI chr 3:143,894,291...143,911,016
Ensembl chr 3:143,894,291...143,910,981
JBrowse link
G Mafb MAF bZIP transcription factor B IAGP MGI PMID:4758758 NCBI chr 2:160,205,597...160,208,985
Ensembl chr 2:160,205,623...160,208,985
JBrowse link
G Nr4a3 nuclear receptor subfamily 4, group A, member 3 IAGP MGI PMID:11784868 NCBI chr 4:48,045,098...48,086,446
Ensembl chr 4:48,045,153...48,086,447
JBrowse link
G Pax2 paired box 2 IAGP MGI PMID:15242798 PMID:16916509 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310
JBrowse link
G Pax3 paired box 3 IAGP MGI PMID:5912439 NCBI chr 1:78,077,904...78,173,773
Ensembl chr 1:78,077,904...78,173,771
JBrowse link
G Six1 sine oculis-related homeobox 1 IAGP MGI PMID:14695375 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link
G Slc26a4 solute carrier family 26, member 4 IAGP MGI PMID:23755160 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968
JBrowse link
G Smg9 SMG9 nonsense mediated mRNA decay factor IEA MGI NCBI chr 7:24,099,106...24,122,197
Ensembl chr 7:24,099,044...24,122,203
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 IAGP MGI PMID:36343245 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
G Tbx1 T-box 1 IAGP MGI PMID:16600992 PMID:23971992 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421
JBrowse link
G Wnt1 wingless-type MMTV integration site family, member 1 IAGP MGI PMID:23041177 NCBI chr15:98,687,738...98,691,711
Ensembl chr15:98,687,738...98,691,718
JBrowse link
G Wnt8a wingless-type MMTV integration site family, member 8A IAGP MGI PMID:23041177 NCBI chr18:34,675,380...34,681,114
Ensembl chr18:34,675,366...34,681,326
JBrowse link
abnormal endolymphatic sac topology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Traf6 TNF receptor-associated factor 6 IEA MGI NCBI chr 2:101,508,765...101,532,013
Ensembl chr 2:101,508,774...101,532,014
JBrowse link
abnormal otolith morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ap3d1 adaptor-related protein complex 3, delta 1 subunit IAGP MGI PMID:4448900 PMID:15109702 NCBI chr10:80,542,790...80,578,137
Ensembl chr10:80,542,790...80,578,098
JBrowse link
G Atg4b autophagy related 4B, cysteine peptidase IAGP MGI PMID:20577052 NCBI chr 1:93,682,627...93,717,328
Ensembl chr 1:93,679,222...93,718,332
JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex-1, subunit 5, muted IAGP MGI PMID:15109702 NCBI chr13:38,786,674...38,821,093
Ensembl chr13:38,776,818...38,819,085
JBrowse link
G Bloc1s6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin IAGP MGI PMID:5559839 PMID:15109702 NCBI chr 2:122,580,425...122,591,407
Ensembl chr 2:122,580,423...122,591,395
JBrowse link
G Cdh23 cadherin related 23 (otocadherin) IEA MGI NCBI chr10:60,138,527...60,532,291
Ensembl chr10:60,138,527...60,532,269
JBrowse link
G Kcne1 potassium voltage-gated channel, Isk-related subfamily, member 1 IAGP MGI PMID:11003695 NCBI chr16:92,142,889...92,156,356
Ensembl chr16:92,142,870...92,156,356
JBrowse link
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 IAGP MGI PMID:15891643 NCBI chr 7:142,660,614...142,980,787
Ensembl chr 7:142,660,099...142,980,779
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IAGP MGI PMID:5473311 NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382
JBrowse link
G Oc90 otoconin 90 IAGP MGI PMID:17300776 NCBI chr15:65,747,899...65,784,260
Ensembl chr15:65,747,902...65,784,246
JBrowse link
G Otog otogelin IEA MGI NCBI chr 7:45,890,411...45,960,858
Ensembl chr 7:45,890,411...45,960,858
JBrowse link
G Pcdh15 protocadherin 15 IAGP MGI PMID:10430593 PMID:15952048 NCBI chr10:72,932,003...74,485,663
Ensembl chr10:72,935,174...74,485,569
JBrowse link
G Slc26a4 solute carrier family 26, member 4 IAGP MGI PMID:21811566 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968
JBrowse link
G Slc30a4 solute carrier family 30 (zinc transporter), member 4 IAGP MGI PMID:6512240 PMID:15109702 NCBI chr 2:122,523,153...122,544,583
Ensembl chr 2:122,523,153...122,544,583
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 IAGP MGI PMID:36343245 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
G Tmc1 transmembrane channel-like gene family 1 IEA MGI NCBI chr19:20,760,820...20,931,566
Ensembl chr19:20,760,822...20,931,566
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 IAGP MGI PMID:13539273 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467
JBrowse link
abnormal otolith organ morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmx3 H6 homeobox 3 IAGP MGI PMID:9435283 NCBI chr 7:131,143,263...131,147,756
Ensembl chr 7:131,144,596...131,146,654
JBrowse link
G Lrig1 leucine-rich repeats and immunoglobulin-like domains 1 IAGP MGI PMID:24086156 NCBI chr 6:94,581,510...94,677,205
Ensembl chr 6:94,581,510...94,677,139
JBrowse link
G Lrig3 leucine-rich repeats and immunoglobulin-like domains 3 IAGP MGI PMID:24086156 NCBI chr10:125,802,088...125,851,228
Ensembl chr10:125,802,037...125,851,228
JBrowse link
G Pax2 paired box 2 IAGP MGI PMID:10934015 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310
JBrowse link
abnormal otolithic membrane morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cmah cytidine monophospho-N-acetylneuraminic acid hydroxylase IAGP MGI PMID:17420276 NCBI chr13:24,511,387...24,661,272
Ensembl chr13:24,511,387...24,661,360
JBrowse link
G Dock2 dedicator of cyto-kinesis 2 IAGP MGI PMID:17420276 NCBI chr11:34,176,815...34,674,732
Ensembl chr11:34,176,815...34,674,719
JBrowse link
G Espn espin IEA MGI NCBI chr 4:152,204,788...152,236,871
Ensembl chr 4:152,204,788...152,236,828
JBrowse link
G Myo6 myosin VI IAGP MGI PMID:5980120 NCBI chr 9:80,072,262...80,219,011
Ensembl chr 9:80,072,313...80,219,011
JBrowse link
G Otog otogelin IAGP MGI PMID:11178734 NCBI chr 7:45,890,411...45,960,858
Ensembl chr 7:45,890,411...45,960,858
JBrowse link
G Pcdh15 protocadherin 15 IAGP MGI PMID:15952048 NCBI chr10:72,932,003...74,485,663
Ensembl chr10:72,935,174...74,485,569
JBrowse link
G Scarb2 scavenger receptor class B, member 2 IAGP MGI PMID:12620969 NCBI chr 5:92,589,170...92,653,516
Ensembl chr 5:92,589,173...92,654,692
JBrowse link
G Slc26a4 solute carrier family 26, member 4 IAGP MGI PMID:11152663 PMID:20442411 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968
JBrowse link
G Tecta tectorin alpha IAGP MGI PMID:11087000 NCBI chr 9:42,240,918...42,312,986
Ensembl chr 9:42,240,915...42,311,225
JBrowse link
abnormal utricle morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr active BCR-related gene IAGP MGI PMID:11921339 NCBI chr11:76,307,560...76,468,515
Ensembl chr11:76,307,560...76,514,384
JBrowse link
G Atg4b autophagy related 4B, cysteine peptidase IAGP MGI PMID:20577052 NCBI chr 1:93,682,627...93,717,328
Ensembl chr 1:93,679,222...93,718,332
JBrowse link
G Atg5 autophagy related 5 IAGP MGI PMID:20577052 NCBI chr10:44,144,325...44,240,295
Ensembl chr10:44,144,354...44,240,287
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase IAGP MGI PMID:11921339 NCBI chr10:74,896,384...75,020,753
Ensembl chr10:74,896,424...75,020,753
JBrowse link
G Bmp4 bone morphogenetic protein 4 IAGP MGI PMID:18404215 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126
JBrowse link
G Cachd1 cache domain containing 1 IAGP MGI PMID:34388681 NCBI chr 4:100,633,870...100,861,741
Ensembl chr 4:100,633,872...100,886,417
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:18678597 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Fgf10 fibroblast growth factor 10 IAGP MGI PMID:12761848 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651
JBrowse link
G Fgf3 fibroblast growth factor 3 IAGP MGI PMID:17855431 NCBI chr 7:144,392,349...144,397,085
Ensembl chr 7:144,391,820...144,398,173
JBrowse link
G Foxg1 forkhead box G1 IAGP MGI PMID:18404215 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IAGP MGI PMID:11425898 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614
JBrowse link
G Hes5 hes family bHLH transcription factor 5 IAGP MGI PMID:11425898 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828
JBrowse link
G Hmx3 H6 homeobox 3 IAGP MGI PMID:9435283 NCBI chr 7:131,143,263...131,147,756
Ensembl chr 7:131,144,596...131,146,654
JBrowse link
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 IAGP MGI PMID:11226272 NCBI chr 7:142,660,614...142,980,787
Ensembl chr 7:142,660,099...142,980,779
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha IAGP MGI PMID:23226461 NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310
JBrowse link
G Oc90 otoconin 90 IAGP MGI PMID:17300776 NCBI chr15:65,747,899...65,784,260
Ensembl chr15:65,747,902...65,784,246
JBrowse link
G Otog otogelin IAGP MGI PMID:10655058 NCBI chr 7:45,890,411...45,960,858
Ensembl chr 7:45,890,411...45,960,858
JBrowse link
G Otx1 orthodenticle homeobox 1 IEA MGI NCBI chr11:21,944,764...21,954,044
Ensembl chr11:21,944,764...21,952,897
JBrowse link
G Pax2 paired box 2 IAGP MGI PMID:16916509 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310
JBrowse link
G Pax3 paired box 3 IAGP MGI PMID:5912439 NCBI chr 1:78,077,904...78,173,773
Ensembl chr 1:78,077,904...78,173,771
JBrowse link
G Pou4f3 POU domain, class 4, transcription factor 3 IAGP MGI PMID:23100430 NCBI chr18:42,527,662...42,529,158
Ensembl chr18:42,527,604...42,530,314
JBrowse link
G Rest RE1-silencing transcription factor IAGP MGI PMID:29961578 NCBI chr 5:77,413,273...77,434,279
Ensembl chr 5:77,413,338...77,434,279
JBrowse link
G Slc26a4 solute carrier family 26, member 4 IAGP MGI PMID:20442411 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968
JBrowse link
G Tbx10 T-box 10 IAGP MGI PMID:5297683 NCBI chr19:4,042,752...4,049,512
Ensembl chr19:4,042,752...4,049,512
JBrowse link
abnormal utricular macula morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 IAGP MGI PMID:8538792 NCBI chr 2:73,646,853...73,723,094
Ensembl chr 2:73,646,853...73,722,983
JBrowse link
G Dll1 delta like canonical Notch ligand 1 IAGP MGI PMID:16495313 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134
JBrowse link
G Dlx5 distal-less homeobox 5 IAGP MGI PMID:12142028 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085
JBrowse link
G Espn espin IEA MGI NCBI chr 4:152,204,788...152,236,871
Ensembl chr 4:152,204,788...152,236,828
JBrowse link
G Foxg1 forkhead box G1 IAGP MGI PMID:16410827 PMID:16495313 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
JBrowse link
G Hmx2 H6 homeobox 2 IAGP MGI PMID:15363417 NCBI chr 7:131,150,486...131,159,743
Ensembl chr 7:131,150,502...131,159,743
JBrowse link
G Hmx3 H6 homeobox 3 IAGP MGI PMID:15363417 NCBI chr 7:131,143,263...131,147,756
Ensembl chr 7:131,144,596...131,146,654
JBrowse link
G Hoxa1 homeobox A1 IAGP MGI PMID:11528388 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297
JBrowse link
G Jag1 jagged 1 IAGP MGI PMID:16410827 PMID:16495313 NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564
JBrowse link
G Marveld2 MARVEL (membrane-associating) domain containing 2 IAGP MGI PMID:23979167 NCBI chr13:100,732,465...100,753,479
Ensembl chr13:100,732,465...100,753,479
JBrowse link
G Mctp1 multiple C2 domains, transmembrane 1 IAGP MGI PMID:30217595 NCBI chr13:76,530,481...77,181,403
Ensembl chr13:76,532,259...77,179,929
JBrowse link
G Myo15a myosin XVA IEA MGI NCBI chr11:60,360,165...60,419,195
Ensembl chr11:60,360,165...60,419,195
JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 IAGP MGI PMID:30217595 NCBI chr13:78,337,090...78,346,954
Ensembl chr13:78,337,092...78,347,876
JBrowse link
G Ntrk2 neurotrophic tyrosine kinase, receptor, type 2 IAGP MGI PMID:7588071 NCBI chr13:58,954,363...59,281,782
Ensembl chr13:58,954,383...59,281,784
JBrowse link
G Rb1 RB transcriptional corepressor 1 IAGP MGI PMID:15843406 NCBI chr14:73,430,298...73,563,446
Ensembl chr14:73,421,113...73,563,262
JBrowse link
G Srrm4 serine/arginine repetitive matrix 4 IAGP MGI PMID:3986619 NCBI chr 5:116,577,331...116,729,882
Ensembl chr 5:116,577,334...116,729,876
JBrowse link
G Tbx10 T-box 10 IAGP MGI PMID:5297683 NCBI chr19:4,042,752...4,049,512
Ensembl chr19:4,042,752...4,049,512
JBrowse link
G Ush1g USH1 protein network component sans IAGP MGI PMID:1927362 NCBI chr11:115,206,018...115,214,239
Ensembl chr11:115,206,018...115,212,867
JBrowse link
abnormal vestibular saccular macula morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atf2 activating transcription factor 2 IAGP MGI PMID:8538792 NCBI chr 2:73,646,853...73,723,094
Ensembl chr 2:73,646,853...73,722,983
JBrowse link
G Atg4b autophagy related 4B, cysteine peptidase IAGP MGI PMID:20577052 NCBI chr 1:93,682,627...93,717,328
Ensembl chr 1:93,679,222...93,718,332
JBrowse link
G Dll1 delta like canonical Notch ligand 1 IAGP MGI PMID:16495313 NCBI chr17:15,587,616...15,597,275
Ensembl chr17:15,587,616...15,597,134
JBrowse link
G Dlx5 distal-less homeobox 5 IAGP MGI PMID:12142028 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085
JBrowse link
G Foxg1 forkhead box G1 IAGP MGI PMID:16495313 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
JBrowse link
G Gbx2 gastrulation brain homeobox 2 IAGP MGI PMID:15829521 NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901
JBrowse link
G Hoxa1 homeobox A1 IAGP MGI PMID:11528388 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297
JBrowse link
G Mctp1 multiple C2 domains, transmembrane 1 IAGP MGI PMID:30217595 NCBI chr13:76,530,481...77,181,403
Ensembl chr13:76,532,259...77,179,929
JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 IAGP MGI PMID:30217595 NCBI chr13:78,337,090...78,346,954
Ensembl chr13:78,337,092...78,347,876
JBrowse link
G Otog otogelin IAGP MGI PMID:26636018 NCBI chr 7:45,890,411...45,960,858
Ensembl chr 7:45,890,411...45,960,858
JBrowse link
G Pax2 paired box 2 IAGP MGI PMID:15242798 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310
JBrowse link
abnormal vestibular saccule duct morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mctp1 multiple C2 domains, transmembrane 1 IAGP MGI PMID:30217595 NCBI chr13:76,530,481...77,181,403
Ensembl chr13:76,532,259...77,179,929
JBrowse link
abnormal vestibular saccule morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr active BCR-related gene IAGP MGI PMID:11921339 NCBI chr11:76,307,560...76,468,515
Ensembl chr11:76,307,560...76,514,384
JBrowse link
G Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 IAGP MGI PMID:10687933 PMID:21325754 NCBI chr 6:113,720,803...114,019,574
Ensembl chr 6:113,720,792...114,019,574
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase IAGP MGI PMID:11921339 NCBI chr10:74,896,384...75,020,753
Ensembl chr10:74,896,424...75,020,753
JBrowse link
G Bmp4 bone morphogenetic protein 4 IAGP MGI PMID:18404215 NCBI chr14:46,620,982...46,628,126
Ensembl chr14:46,620,977...46,628,126
JBrowse link
G Cachd1 cache domain containing 1 IAGP MGI PMID:34388681 NCBI chr 4:100,633,870...100,861,741
Ensembl chr 4:100,633,872...100,886,417
JBrowse link
G Dlx5 distal-less homeobox 5 IAGP MGI PMID:12142028 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:16916509 PMID:18678597 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Fgf3 fibroblast growth factor 3 IAGP MGI PMID:17855431 NCBI chr 7:144,392,349...144,397,085
Ensembl chr 7:144,391,820...144,398,173
JBrowse link
G Foxg1 forkhead box G1 IAGP MGI PMID:16410827 PMID:18404215 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:23971992 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IAGP MGI PMID:11425898 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614
JBrowse link
G Hes5 hes family bHLH transcription factor 5 IAGP MGI PMID:11425898 NCBI chr 4:155,042,358...155,046,829
Ensembl chr 4:155,045,380...155,046,828
JBrowse link
G Hmx3 H6 homeobox 3 IAGP MGI PMID:9435283 NCBI chr 7:131,143,263...131,147,756
Ensembl chr 7:131,144,596...131,146,654
JBrowse link
G Jag1 jagged 1 IAGP MGI PMID:16410827 NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564
JBrowse link
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 IAGP MGI PMID:11226272 NCBI chr 7:142,660,614...142,980,787
Ensembl chr 7:142,660,099...142,980,779
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IAGP MGI PMID:5473311 NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha IAGP MGI PMID:23226461 NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310
JBrowse link
G Mctp1 multiple C2 domains, transmembrane 1 IAGP MGI PMID:30217595 NCBI chr13:76,530,481...77,181,403
Ensembl chr13:76,532,259...77,179,929
JBrowse link
G Mitf melanogenesis associated transcription factor IAGP MGI PMID:4392283 NCBI chr 6:97,783,966...97,998,321
Ensembl chr 6:97,784,013...97,998,310
JBrowse link
G Oc90 otoconin 90 IAGP MGI PMID:17300776 NCBI chr15:65,747,899...65,784,260
Ensembl chr15:65,747,902...65,784,246
JBrowse link
G Otog otogelin IAGP MGI PMID:10655058 NCBI chr 7:45,890,411...45,960,858
Ensembl chr 7:45,890,411...45,960,858
JBrowse link
G Otx1 orthodenticle homeobox 1 IEA MGI NCBI chr11:21,944,764...21,954,044
Ensembl chr11:21,944,764...21,952,897
JBrowse link
G Pax2 paired box 2 IAGP MGI PMID:16916509 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310
JBrowse link
G Pax3 paired box 3 IAGP MGI PMID:5912439 NCBI chr 1:78,077,904...78,173,773
Ensembl chr 1:78,077,904...78,173,771
JBrowse link
G Pcdh15 protocadherin 15 IAGP MGI PMID:10430593 PMID:15952048 NCBI chr10:72,932,003...74,485,663
Ensembl chr10:72,935,174...74,485,569
JBrowse link
G Phex phosphate regulating endopeptidase homolog, X-linked IAGP MGI PMID:18289812 NCBI chr  X:155,945,071...156,198,282
Ensembl chr  X:155,945,071...156,198,308
JBrowse link
G Six1 sine oculis-related homeobox 1 IAGP MGI PMID:16916509 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link
G Slc26a4 solute carrier family 26, member 4 IAGP MGI PMID:20442411 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968
JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 IAGP MGI PMID:15846349 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610
JBrowse link
G Tbx1 T-box 1 IAGP MGI PMID:23971992 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421
JBrowse link
G Tbx10 T-box 10 IAGP MGI PMID:5297683 NCBI chr19:4,042,752...4,049,512
Ensembl chr19:4,042,752...4,049,512
JBrowse link
G Tmprss3 transmembrane protease, serine 3 IAGP MGI PMID:21454591 NCBI chr17:31,398,237...31,419,478
Ensembl chr17:31,398,239...31,417,951
JBrowse link
absent endolymphatic duct term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx5 distal-less homeobox 5 IAGP MGI PMID:10433912 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:10471511 PMID:16916509 PMID:18678597 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Fgf3 fibroblast growth factor 3 IAGP MGI PMID:8223243 NCBI chr 7:144,392,349...144,397,085
Ensembl chr 7:144,391,820...144,398,173
JBrowse link
G Gbx2 gastrulation brain homeobox 2 IAGP MGI PMID:15829521 NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901
JBrowse link
G Hmx2 H6 homeobox 2 IAGP MGI PMID:15363417 NCBI chr 7:131,150,486...131,159,743
Ensembl chr 7:131,150,502...131,159,743
JBrowse link
G Hmx3 H6 homeobox 3 IAGP MGI PMID:15363417 NCBI chr 7:131,143,263...131,147,756
Ensembl chr 7:131,144,596...131,146,654
JBrowse link
G Hoxa1 homeobox A1 IAGP MGI PMID:1346922 PMID:11528388 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297
JBrowse link
G Mafb MAF bZIP transcription factor B IAGP MGI PMID:4758758 NCBI chr 2:160,205,597...160,208,985
Ensembl chr 2:160,205,623...160,208,985
JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:12231626 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Slc25a13 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 IAGP MGI PMID:29301908 NCBI chr 6:6,041,218...6,217,304
Ensembl chr 6:6,041,218...6,217,173
JBrowse link
absent endolymphatic sac term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf3 fibroblast growth factor 3 IAGP MGI PMID:8223243 PMID:17855431 NCBI chr 7:144,392,349...144,397,085
Ensembl chr 7:144,391,820...144,398,173
JBrowse link
G Hoxa1 homeobox A1 IAGP MGI PMID:11528388 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297
JBrowse link
G Slc25a13 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 IAGP MGI PMID:29301908 NCBI chr 6:6,041,218...6,217,304
Ensembl chr 6:6,041,218...6,217,173
JBrowse link
absent otoliths term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr active BCR-related gene IAGP MGI PMID:11684658 PMID:11921339 NCBI chr11:76,307,560...76,468,515
Ensembl chr11:76,307,560...76,514,384
JBrowse link
G Ap3d1 adaptor-related protein complex 3, delta 1 subunit IAGP MGI PMID:6736600 NCBI chr10:80,542,790...80,578,137
Ensembl chr10:80,542,790...80,578,098
JBrowse link
G Atg4b autophagy related 4B, cysteine peptidase IAGP MGI PMID:20577052 NCBI chr 1:93,682,627...93,717,328
Ensembl chr 1:93,679,222...93,718,332
JBrowse link
G Atg5 autophagy related 5 IAGP MGI PMID:20577052 NCBI chr10:44,144,325...44,240,295
Ensembl chr10:44,144,354...44,240,287
JBrowse link
G Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 IAGP MGI PMID:9668038 NCBI chr 6:113,720,803...114,019,574
Ensembl chr 6:113,720,792...114,019,574
JBrowse link
G Atp6v0a4 ATPase, H+ transporting, lysosomal V0 subunit A4 IAGP MGI PMID:22872862 NCBI chr 6:38,025,418...38,101,521
Ensembl chr 6:38,025,418...38,101,521
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase IAGP MGI PMID:11684658 PMID:11921339 NCBI chr10:74,896,384...75,020,753
Ensembl chr10:74,896,424...75,020,753
JBrowse link
G Bloc1s5 biogenesis of lysosomal organelles complex-1, subunit 5, muted IAGP MGI PMID:5367369 NCBI chr13:38,786,674...38,821,093
Ensembl chr13:38,776,818...38,819,085
JBrowse link
G Cyba cytochrome b-245, alpha polypeptide IAGP MGI PMID:18292807 NCBI chr 8:123,151,510...123,159,679
Ensembl chr 8:123,151,515...123,159,669
JBrowse link
G Foxi1 forkhead box I1 IAGP MGI PMID:12642503 NCBI chr11:34,154,341...34,158,089
Ensembl chr11:34,154,338...34,158,089
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha IAGP MGI PMID:23226461 NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310
JBrowse link
G Nox3 NADPH oxidase 3 IAGP MGI PMID:9755211 PMID:10491954 PMID:15014044 PMID:21161235 NCBI chr17:3,685,515...3,746,536
Ensembl chr17:3,685,515...3,746,536
JBrowse link
G Noxo1 NADPH oxidase organizer 1 IAGP MGI PMID:16431374 NCBI chr17:24,915,208...24,919,504
Ensembl chr17:24,915,208...24,919,503
JBrowse link
G Otop1 otopetrin 1 IAGP MGI PMID:9714575 PMID:12651873 PMID:15109702 PMID:15730345 PMID:20554841 NCBI chr 5:38,434,748...38,461,560
Ensembl chr 5:38,433,316...38,461,552
JBrowse link
G Scarb2 scavenger receptor class B, member 2 IAGP MGI PMID:12620969 NCBI chr 5:92,589,170...92,653,516
Ensembl chr 5:92,589,173...92,654,692
JBrowse link
G Slc26a4 solute carrier family 26, member 4 IAGP MGI PMID:11152663 PMID:20442411 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 IAGP MGI PMID:13539273 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467
JBrowse link
absent utricle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 IAGP MGI PMID:20736290 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659
JBrowse link
G Foxg1 forkhead box G1 IAGP MGI PMID:20736290 PMID:23971992 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
JBrowse link
G Gata3 GATA binding protein 3 IAGP MGI PMID:11135239 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:23971992 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Hoxa1 homeobox A1 IAGP MGI PMID:11528388 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha IEA MGI NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310
JBrowse link
G Pax2 paired box 2 IAGP MGI PMID:8943028 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310
JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:12231626 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Slc25a13 solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13 IAGP MGI PMID:29301908 NCBI chr 6:6,041,218...6,217,304
Ensembl chr 6:6,041,218...6,217,173
JBrowse link
absent vestibular saccule term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 IAGP MGI PMID:20736290 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:18678597 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Foxg1 forkhead box G1 IAGP MGI PMID:20736290 PMID:23971992 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
JBrowse link
G Gata3 GATA binding protein 3 IAGP MGI PMID:11135239 NCBI chr 2:9,861,889...9,894,845
Ensembl chr 2:9,861,889...9,894,845
JBrowse link
G Gbx2 gastrulation brain homeobox 2 IAGP MGI PMID:15829521 NCBI chr 1:89,855,684...89,858,898
Ensembl chr 1:89,855,678...89,858,901
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:23971992 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Hoxa1 homeobox A1 IAGP MGI PMID:11528388 NCBI chr 6:52,132,573...52,135,299
Ensembl chr 6:52,132,570...52,135,297
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha IEA MGI NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310
JBrowse link
G Pax2 paired box 2 IAGP MGI PMID:10934015 PMID:15242798 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310
JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:12231626 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
decreased otolith number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr active BCR-related gene IAGP MGI PMID:11921339 NCBI chr11:76,307,560...76,468,515
Ensembl chr11:76,307,560...76,514,384
JBrowse link
G Atf2 activating transcription factor 2 IAGP MGI PMID:8538792 NCBI chr 2:73,646,853...73,723,094
Ensembl chr 2:73,646,853...73,722,983
JBrowse link
G Atp6v1b1 ATPase, H+ transporting, lysosomal V1 subunit B1 IAGP MGI PMID:28934385 NCBI chr 6:83,719,999...83,735,837
Ensembl chr 6:83,719,972...83,735,837
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase IAGP MGI PMID:11921339 NCBI chr10:74,896,384...75,020,753
Ensembl chr10:74,896,424...75,020,753
JBrowse link
G Cachd1 cache domain containing 1 IAGP MGI PMID:34388681 NCBI chr 4:100,633,870...100,861,741
Ensembl chr 4:100,633,872...100,886,417
JBrowse link
G Oc90 otoconin 90 IAGP MGI PMID:17300776 NCBI chr15:65,747,899...65,784,260
Ensembl chr15:65,747,902...65,784,246
JBrowse link
G Pcdh15 protocadherin 15 IAGP MGI PMID:15952048 NCBI chr10:72,932,003...74,485,663
Ensembl chr10:72,935,174...74,485,569
JBrowse link
G S1pr2 sphingosine-1-phosphate receptor 2 IAGP MGI PMID:16945494 PMID:17284444 PMID:26805784 NCBI chr 9:20,877,248...20,888,089
Ensembl chr 9:20,873,657...20,888,077
JBrowse link
G Slc26a4 solute carrier family 26, member 4 IAGP MGI PMID:21811566 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968
JBrowse link
G Tecta tectorin alpha IAGP MGI PMID:11087000 NCBI chr 9:42,240,918...42,312,986
Ensembl chr 9:42,240,915...42,311,225
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 IAGP MGI PMID:13539273 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467
JBrowse link
detached otolithic membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 IAGP MGI PMID:11120752 PMID:15891643 NCBI chr 7:142,660,614...142,980,787
Ensembl chr 7:142,660,099...142,980,779
JBrowse link
G Otog otogelin IAGP MGI PMID:10655058 PMID:11178734 NCBI chr 7:45,890,411...45,960,858
Ensembl chr 7:45,890,411...45,960,858
JBrowse link
G Slc26a4 solute carrier family 26, member 4 IAGP MGI PMID:31155292 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968
JBrowse link
dilated endolymphatic duct term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp6v0a4 ATPase, H+ transporting, lysosomal V0 subunit A4 IAGP MGI PMID:22872862 NCBI chr 6:38,025,418...38,101,521
Ensembl chr 6:38,025,418...38,101,521
JBrowse link
G Atp6v1b1 ATPase, H+ transporting, lysosomal V1 subunit B1 IAGP MGI PMID:28934385 NCBI chr 6:83,719,999...83,735,837
Ensembl chr 6:83,719,972...83,735,837
JBrowse link
G Cachd1 cache domain containing 1 IAGP MGI PMID:34388681 NCBI chr 4:100,633,870...100,861,741
Ensembl chr 4:100,633,872...100,886,417
JBrowse link
G Efnb2 ephrin B2 IAGP MGI PMID:17158005 NCBI chr 8:8,667,235...8,711,242
Ensembl chr 8:8,667,434...8,711,242
JBrowse link
G Foxi1 forkhead box I1 IAGP MGI PMID:12642503 NCBI chr11:34,154,341...34,158,089
Ensembl chr11:34,154,338...34,158,089
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha IAGP MGI PMID:23226461 NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310
JBrowse link
G Pax2 paired box 2 IAGP MGI PMID:8943028 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310
JBrowse link
G Pou3f4 POU domain, class 3, transcription factor 4 IAGP MGI PMID:10407036 NCBI chr  X:109,857,985...109,862,714
Ensembl chr  X:109,857,886...109,860,813
JBrowse link
G Six1 sine oculis-related homeobox 1 IAGP MGI PMID:14695375 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link
G Slc26a4 solute carrier family 26, member 4 IAGP MGI PMID:11152663 PMID:14690057 PMID:21811566 PMID:24760582 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968
JBrowse link
G Sox9 SRY (sex determining region Y)-box 9 IAGP MGI PMID:36343245 NCBI chr11:112,673,036...112,678,583
Ensembl chr11:112,673,050...112,678,586
JBrowse link
G Tbx1 T-box 1 IAGP MGI PMID:15652707 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 IAGP MGI PMID:13539273 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467
JBrowse link
dilated endolymphatic sac term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Efnb2 ephrin B2 IAGP MGI PMID:17158005 NCBI chr 8:8,667,235...8,711,242
Ensembl chr 8:8,667,434...8,711,242
JBrowse link
G Foxi1 forkhead box I1 IAGP MGI PMID:12642503 NCBI chr11:34,154,341...34,158,089
Ensembl chr11:34,154,338...34,158,089
JBrowse link
G Lmx1a LIM homeobox transcription factor 1 alpha IAGP MGI PMID:23226461 NCBI chr 1:167,515,864...167,676,310
Ensembl chr 1:167,516,806...167,676,310
JBrowse link
G Slc26a4 solute carrier family 26, member 4 IAGP MGI PMID:11152663 PMID:21811566 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968
JBrowse link
G Vangl2 VANGL planar cell polarity 2 IAGP MGI PMID:5912439 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011
JBrowse link
enlarged otoliths term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abr active BCR-related gene IAGP MGI PMID:11921339 NCBI chr11:76,307,560...76,468,515
Ensembl chr11:76,307,560...76,514,384
JBrowse link
G Atg4b autophagy related 4B, cysteine peptidase IAGP MGI PMID:20577052 NCBI chr 1:93,682,627...93,717,328
Ensembl chr 1:93,679,222...93,718,332
JBrowse link
G Atg5 autophagy related 5 IAGP MGI PMID:20577052 NCBI chr10:44,144,325...44,240,295
Ensembl chr10:44,144,354...44,240,287
JBrowse link
G Bcr BCR activator of RhoGEF and GTPase IAGP MGI PMID:11921339 NCBI chr10:74,896,384...75,020,753
Ensembl chr10:74,896,424...75,020,753
JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IAGP MGI PMID:5473311 NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382
JBrowse link
G Oc90 otoconin 90 IAGP MGI PMID:17300776 NCBI chr15:65,747,899...65,784,260
Ensembl chr15:65,747,902...65,784,246
JBrowse link
G Pcdh15 protocadherin 15 IAGP MGI PMID:10430593 NCBI chr10:72,932,003...74,485,663
Ensembl chr10:72,935,174...74,485,569
JBrowse link
G S1pr2 sphingosine-1-phosphate receptor 2 IAGP MGI PMID:17284444 NCBI chr 9:20,877,248...20,888,089
Ensembl chr 9:20,873,657...20,888,077
JBrowse link
G Slc26a4 solute carrier family 26, member 4 IAGP MGI PMID:11152663 PMID:15320950 PMID:17200157 PMID:21811566 PMID:31155292 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968
JBrowse link
G Tecta tectorin alpha IAGP MGI PMID:11087000 NCBI chr 9:42,240,918...42,312,986
Ensembl chr 9:42,240,915...42,311,225
JBrowse link
G Zeb1 zinc finger E-box binding homeobox 1 IAGP MGI PMID:21980308 NCBI chr18:5,591,330...5,775,468
Ensembl chr18:5,591,860...5,775,467
JBrowse link
enlarged utricle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx5 distal-less homeobox 5 IAGP MGI PMID:12142028 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085
JBrowse link
G Foxi1 forkhead box I1 IAGP MGI PMID:12642503 NCBI chr11:34,154,341...34,158,089
Ensembl chr11:34,154,338...34,158,089
JBrowse link
enlarged vestibular saccule term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxi1 forkhead box I1 IAGP MGI PMID:12642503 NCBI chr11:34,154,341...34,158,089
Ensembl chr11:34,154,338...34,158,089
JBrowse link
G Slc26a4 solute carrier family 26, member 4 IAGP MGI PMID:11152663 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968
JBrowse link
fused vestibular saccule and utricle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Mctp1 multiple C2 domains, transmembrane 1 IAGP MGI PMID:30217595 NCBI chr13:76,530,481...77,181,403
Ensembl chr13:76,532,259...77,179,929
JBrowse link
G Nr2f1 nuclear receptor subfamily 2, group F, member 1 IAGP MGI PMID:30217595 NCBI chr13:78,337,090...78,346,954
Ensembl chr13:78,337,092...78,347,876
JBrowse link
short endolymphatic duct term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Dlx5 distal-less homeobox 5 IAGP MGI PMID:12142028 NCBI chr 6:6,877,801...6,882,068
Ensembl chr 6:6,877,805...6,882,085
JBrowse link
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:16916509 PMID:18678597 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Fat1 FAT atypical cadherin 1 IAGP MGI PMID:23785297 NCBI chr 8:45,386,137...45,505,294
Ensembl chr 8:45,388,484...45,505,294
JBrowse link
G Fgf3 fibroblast growth factor 3 IAGP MGI PMID:17855431 NCBI chr 7:144,392,349...144,397,085
Ensembl chr 7:144,391,820...144,398,173
JBrowse link
G Pax2 paired box 2 IAGP MGI PMID:15242798 PMID:16916509 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310
JBrowse link
G Pax3 paired box 3 IAGP MGI PMID:5912439 NCBI chr 1:78,077,904...78,173,773
Ensembl chr 1:78,077,904...78,173,771
JBrowse link
G Six1 sine oculis-related homeobox 1 IAGP MGI PMID:16916509 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link
small endolymphatic duct term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Chd7 chromodomain helicase DNA binding protein 7 IAGP MGI PMID:20736290 NCBI chr 4:8,690,345...8,868,449
Ensembl chr 4:8,690,406...8,867,659
JBrowse link
G Efnb2 ephrin B2 IAGP MGI PMID:17158005 NCBI chr 8:8,667,235...8,711,242
Ensembl chr 8:8,667,434...8,711,242
JBrowse link
G Ephb2 Eph receptor B2 IAGP MGI PMID:10839360 NCBI chr 4:136,374,850...136,563,637
Ensembl chr 4:136,374,850...136,563,299
JBrowse link
G Ephb3 Eph receptor B3 IAGP MGI PMID:10839360 NCBI chr16:21,023,530...21,042,054
Ensembl chr16:21,023,505...21,042,055
JBrowse link
G Foxg1 forkhead box G1 IAGP MGI PMID:20736290 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
JBrowse link
G Pax2 paired box 2 IAGP MGI PMID:15242798 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310
JBrowse link
small utricle term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxg1 forkhead box G1 IAGP MGI PMID:16410827 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
JBrowse link
G Jag1 jagged 1 IAGP MGI PMID:16410827 NCBI chr 2:136,923,371...136,958,440
Ensembl chr 2:136,923,376...136,958,564
JBrowse link
G Six1 sine oculis-related homeobox 1 IAGP MGI PMID:19389353 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 IAGP MGI PMID:15846349 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610
JBrowse link
G Tbx10 T-box 10 IAGP MGI PMID:5297683 NCBI chr19:4,042,752...4,049,512
Ensembl chr19:4,042,752...4,049,512
JBrowse link
small vestibular saccule term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Eya1 EYA transcriptional coactivator and phosphatase 1 IAGP MGI PMID:16916509 NCBI chr 1:14,239,177...14,381,259
Ensembl chr 1:14,239,178...14,380,459
JBrowse link
G Fgf10 fibroblast growth factor 10 IAGP MGI PMID:12761848 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651
JBrowse link
G Mctp1 multiple C2 domains, transmembrane 1 IAGP MGI PMID:30217595 NCBI chr13:76,530,481...77,181,403
Ensembl chr13:76,532,259...77,179,929
JBrowse link
G Pax2 paired box 2 IAGP MGI PMID:16916509 NCBI chr19:44,735,040...44,826,708
Ensembl chr19:44,744,484...44,826,310
JBrowse link
G Six1 sine oculis-related homeobox 1 IAGP MGI PMID:16916509 PMID:19389353 NCBI chr12:73,088,601...73,093,486
Ensembl chr12:73,086,789...73,100,661
JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 IAGP MGI PMID:15846349 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610
JBrowse link
G Tbx10 T-box 10 IAGP MGI PMID:5297683 NCBI chr19:4,042,752...4,049,512
Ensembl chr19:4,042,752...4,049,512
JBrowse link
utricular degeneration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxg1 forkhead box G1 IAGP MGI PMID:24009395 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
JBrowse link
G Hmx2 H6 homeobox 2 IAGP MGI PMID:15363417 NCBI chr 7:131,150,486...131,159,743
Ensembl chr 7:131,150,502...131,159,743
JBrowse link
G Hmx3 H6 homeobox 3 IAGP MGI PMID:15363417 NCBI chr 7:131,143,263...131,147,756
Ensembl chr 7:131,144,596...131,146,654
JBrowse link
G Slc12a2 solute carrier family 12, member 2 IAGP MGI PMID:24009395 NCBI chr18:58,011,505...58,079,893
Ensembl chr18:58,011,750...58,079,893
JBrowse link
G Tbx1 T-box 1 IAGP MGI PMID:24009395 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421
JBrowse link
utricular macular degeneration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Hmx3 H6 homeobox 3 IAGP MGI PMID:9435283 NCBI chr 7:131,143,263...131,147,756
Ensembl chr 7:131,144,596...131,146,654
JBrowse link
G Kcne1 potassium voltage-gated channel, Isk-related subfamily, member 1 IAGP MGI PMID:15243133 NCBI chr16:92,142,889...92,156,356
Ensembl chr16:92,142,870...92,156,356
JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 IAGP MGI PMID:12618319 NCBI chr 1:172,168,777...172,201,652
Ensembl chr 1:172,168,777...172,201,652
JBrowse link
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 IAGP MGI PMID:15891643 NCBI chr 7:142,660,614...142,980,787
Ensembl chr 7:142,660,099...142,980,779
JBrowse link
G Myo6 myosin VI IAGP MGI PMID:5980120 NCBI chr 9:80,072,262...80,219,011
Ensembl chr 9:80,072,313...80,219,011
JBrowse link
G S1pr2 sphingosine-1-phosphate receptor 2 IAGP MGI PMID:17287522 NCBI chr 9:20,877,248...20,888,089
Ensembl chr 9:20,873,657...20,888,077
JBrowse link
G S1pr3 sphingosine-1-phosphate receptor 3 IAGP MGI PMID:17287522 NCBI chr13:51,562,654...51,576,833
Ensembl chr13:51,562,675...51,576,833
JBrowse link
G Slc26a4 solute carrier family 26, member 4 IAGP MGI PMID:11152663 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968
JBrowse link
G Srrm4 serine/arginine repetitive matrix 4 IAGP MGI PMID:3986619 NCBI chr 5:116,577,331...116,729,882
Ensembl chr 5:116,577,334...116,729,876
JBrowse link
vestibular saccular degeneration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Atp2b2 ATPase, Ca++ transporting, plasma membrane 2 IAGP MGI PMID:10441500 NCBI chr 6:113,720,803...114,019,574
Ensembl chr 6:113,720,792...114,019,574
JBrowse link
G Cdh23 cadherin related 23 (otocadherin) IEA MGI NCBI chr10:60,138,527...60,532,291
Ensembl chr10:60,138,527...60,532,269
JBrowse link
G Foxg1 forkhead box G1 IAGP MGI PMID:24009395 NCBI chr12:49,429,666...49,433,650
Ensembl chr12:49,429,443...49,433,644
JBrowse link
G Hmx2 H6 homeobox 2 IAGP MGI PMID:15363417 NCBI chr 7:131,150,486...131,159,743
Ensembl chr 7:131,150,502...131,159,743
JBrowse link
G Hmx3 H6 homeobox 3 IAGP MGI PMID:15363417 NCBI chr 7:131,143,263...131,147,756
Ensembl chr 7:131,144,596...131,146,654
JBrowse link
G Pcdh15 protocadherin 15 IAGP MGI PMID:15952048 NCBI chr10:72,932,003...74,485,663
Ensembl chr10:72,935,174...74,485,569
JBrowse link
G S1pr2 sphingosine-1-phosphate receptor 2 IAGP MGI PMID:16945494 NCBI chr 9:20,877,248...20,888,089
Ensembl chr 9:20,873,657...20,888,077
JBrowse link
G Slc12a2 solute carrier family 12, member 2 IAGP MGI PMID:24009395 NCBI chr18:58,011,505...58,079,893
Ensembl chr18:58,011,750...58,079,893
JBrowse link
G Tbx1 T-box 1 IAGP MGI PMID:24009395 NCBI chr16:18,399,729...18,409,412
Ensembl chr16:18,399,729...18,409,421
JBrowse link
vestibular saccular macula degeneration term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdh23 cadherin related 23 (otocadherin) IAGP MGI PMID:13336002 NCBI chr10:60,138,527...60,532,291
Ensembl chr10:60,138,527...60,532,269
JBrowse link
G Espn espin IEA MGI NCBI chr 4:152,204,788...152,236,871
Ensembl chr 4:152,204,788...152,236,828
JBrowse link
G Grxcr1 glutaredoxin, cysteine rich 1 IAGP MGI PMID:13336002 NCBI chr 5:68,189,122...68,323,741
Ensembl chr 5:68,189,178...68,323,741
JBrowse link
G Hmx3 H6 homeobox 3 IAGP MGI PMID:9435283 NCBI chr 7:131,143,263...131,147,756
Ensembl chr 7:131,144,596...131,146,654
JBrowse link
G Kcne1 potassium voltage-gated channel, Isk-related subfamily, member 1 IAGP MGI PMID:15243133 NCBI chr16:92,142,889...92,156,356
Ensembl chr16:92,142,870...92,156,356
JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 IAGP MGI PMID:12618319 NCBI chr 1:172,168,777...172,201,652
Ensembl chr 1:172,168,777...172,201,652
JBrowse link
G Myo6 myosin VI IAGP MGI PMID:5980120 NCBI chr 9:80,072,262...80,219,011
Ensembl chr 9:80,072,313...80,219,011
JBrowse link
G Myo7a myosin VIIA IAGP MGI PMID:13336002 NCBI chr 7:97,700,261...97,768,730
Ensembl chr 7:97,700,267...97,768,731
JBrowse link
G Pcdh15 protocadherin 15 IAGP MGI PMID:15952048 NCBI chr10:72,932,003...74,485,663
Ensembl chr10:72,935,174...74,485,569
JBrowse link
G S1pr2 sphingosine-1-phosphate receptor 2 IAGP MGI PMID:17287522 NCBI chr 9:20,877,248...20,888,089
Ensembl chr 9:20,873,657...20,888,077
JBrowse link
G S1pr3 sphingosine-1-phosphate receptor 3 IAGP MGI PMID:17287522 NCBI chr13:51,562,654...51,576,833
Ensembl chr13:51,562,675...51,576,833
JBrowse link
G Slc26a4 solute carrier family 26, member 4 IAGP MGI PMID:11152663 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968
JBrowse link
G Tmc1 transmembrane channel-like gene family 1 IEA MGI NCBI chr19:20,760,820...20,931,566
Ensembl chr19:20,760,822...20,931,566
JBrowse link
G Tmie transmembrane inner ear IAGP MGI PMID:14027064 NCBI chr 9:110,694,755...110,709,141
Ensembl chr 9:110,694,779...110,709,181
JBrowse link
G Ush1g USH1 protein network component sans IAGP MGI PMID:1927362 NCBI chr11:115,206,018...115,214,239
Ensembl chr11:115,206,018...115,212,867
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16659
    hearing/vestibular/ear phenotype 1013
      abnormal ear morphology 562
        abnormal inner ear morphology 348
          abnormal membranous labyrinth morphology 302
            abnormal vestibular labyrinth morphology 99
              abnormal endolymphatic duct morphology + 40
              abnormal otolith organ morphology + 68
              abnormal otolithic membrane morphology + 37
paths to the root