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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal respiratory conducting tube morphology
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Accession:MP:0004391 term browser browse the term
Definition:any structural anomaly of the tubes of the respiratory system that allow passage of air from the trachea to the terminal bronchioles
Synonyms:exact_synonym: abnormal conducting airways;   abnormal respiratory conducting zone;   abnormal respiratory passage
 broad_synonym: airway malformation
 xref: Fyler:4232



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abnormal respiratory conducting tube morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 a disintegrin and metallopeptidase domain 17 IAGP MGI PMID:11254358 NCBI chr12:21,373,510...21,423,633
Ensembl chr12:21,373,510...21,423,633
JBrowse link
G Cby1 chibby family member 1, beta catenin antagonist IAGP MGI PMID:21049041 NCBI chr15:79,543,437...79,551,861
Ensembl chr15:79,543,400...79,551,861
JBrowse link
G Ccn2 cellular communication network factor 2 IAGP MGI PMID:18213577 NCBI chr10:24,471,340...24,474,581
Ensembl chr10:24,471,340...24,474,581
JBrowse link
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 IAGP MGI PMID:20223754 NCBI chr15:85,782,959...85,918,424
Ensembl chr15:85,783,130...85,918,404
JBrowse link
G Crb3 crumbs family member 3 IAGP MGI PMID:26631503 NCBI chr17:57,368,583...57,372,920
Ensembl chr17:57,366,105...57,372,918
JBrowse link
G Dnah11 dynein, axonemal, heavy chain 11 IEA MGI NCBI chr12:117,841,717...118,162,778
Ensembl chr12:117,841,717...118,162,778
JBrowse link
G Foxm1 forkhead box M1 IAGP MGI PMID:19033457 NCBI chr 6:128,339,957...128,352,849
Ensembl chr 6:128,339,930...128,353,109
JBrowse link
G Foxp2 forkhead box P2 IAGP MGI PMID:17428829 NCBI chr 6:14,901,348...15,441,976
Ensembl chr 6:14,901,348...15,441,976
JBrowse link
G Grhl2 grainyhead like transcription factor 2 IAGP MGI PMID:21377456 NCBI chr15:37,233,065...37,363,813
Ensembl chr15:37,233,280...37,363,813
JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:23873040 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 IAGP MGI PMID:17156747 NCBI chr14:106,129,381...106,134,559
Ensembl chr14:106,129,381...106,134,253
JBrowse link
G Spry4 sprouty RTK signaling antagonist 4 IAGP MGI PMID:17156747 NCBI chr18:38,719,300...38,734,400
Ensembl chr18:38,719,300...38,734,468
JBrowse link
G Tgfb3 transforming growth factor, beta 3 IAGP MGI PMID:7493021 NCBI chr12:86,103,517...86,125,815
Ensembl chr12:86,103,519...86,125,815
JBrowse link
G Vangl2 VANGL planar cell polarity 2 IAGP MGI PMID:20223754 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011
JBrowse link
G Wdr11 WD repeat domain 11 IAGP MGI PMID:29263200 NCBI chr 7:129,193,373...129,237,462
Ensembl chr 7:129,193,587...129,237,462
JBrowse link
abnormal branching involved in terminal bronchiole morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Nr3c1 nuclear receptor subfamily 3, group C, member 1 IAGP MGI PMID:7628695 NCBI chr18:39,543,598...39,652,485
Ensembl chr18:39,543,598...39,652,474
JBrowse link
G Timp3 tissue inhibitor of metalloproteinase 3 IAGP MGI PMID:14499643 NCBI chr10:86,136,276...86,185,369
Ensembl chr10:86,136,236...86,185,370
JBrowse link
abnormal bronchial cartilage morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ano1 anoctamin 1, calcium activated chloride channel IAGP MGI PMID:18585372 NCBI chr 7:144,142,286...144,305,762
Ensembl chr 7:144,142,286...144,305,711
JBrowse link
G Mgp matrix Gla protein IAGP MGI PMID:9052783 NCBI chr 6:136,849,433...136,852,821
Ensembl chr 6:136,849,433...136,852,821
JBrowse link
G Serpinh1 serine (or cysteine) peptidase inhibitor, clade H, member 1 IAGP MGI PMID:22492985 NCBI chr 7:98,994,583...99,002,321
Ensembl chr 7:98,994,583...99,002,446
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II IAGP MGI PMID:18990706 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428
JBrowse link
G Twist2 twist basic helix-loop-helix transcription factor 2 IAGP MGI PMID:18990706 NCBI chr 1:91,729,183...91,775,756
Ensembl chr 1:91,729,183...91,775,750
JBrowse link
abnormal bronchiole epithelium morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca3 ATP-binding cassette, sub-family A member 3 IAGP MGI PMID:17267394 NCBI chr17:24,570,997...24,629,178
Ensembl chr17:24,570,924...24,629,175
JBrowse link
G Adam17 a disintegrin and metallopeptidase domain 17 IAGP MGI PMID:9812885 NCBI chr12:21,373,510...21,423,633
Ensembl chr12:21,373,510...21,423,633
JBrowse link
G Egfr epidermal growth factor receptor IAGP MGI PMID:7618085 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158
JBrowse link
G Hoxa5 homeobox A5 IAGP MGI PMID:9441679 NCBI chr 6:52,178,768...52,181,437
Ensembl chr 6:52,178,734...52,181,567
JBrowse link
G Ifi27l2a interferon, alpha-inducible protein 27 like 2A IAGP MGI PMID:25184786 NCBI chr12:103,400,132...103,409,939
Ensembl chr12:103,408,426...103,409,939
JBrowse link
G Igf1r insulin-like growth factor I receptor IAGP MGI PMID:25238791 PMID:27861515 NCBI chr 7:67,601,486...67,883,416
Ensembl chr 7:67,602,575...67,883,416
JBrowse link
G Itga3 integrin alpha 3 IAGP MGI PMID:8951069 NCBI chr11:94,935,301...94,967,637
Ensembl chr11:94,935,300...94,967,627
JBrowse link
G Lox lysyl oxidase IAGP MGI PMID:16192629 NCBI chr18:52,649,132...52,662,939
Ensembl chr18:52,649,139...52,662,939
JBrowse link
G Ndor1 NADPH dependent diflavin oxidoreductase 1 IAGP MGI PMID:25238791 NCBI chr 2:25,134,825...25,145,458
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
Ensembl chr 2:25,134,833...25,146,034
JBrowse link
G Pofut1 protein O-fucosyltransferase 1 IAGP MGI PMID:19502490 NCBI chr 2:153,083,435...153,114,862
Ensembl chr 2:153,083,453...153,112,167
JBrowse link
G Pura purine rich element binding protein A IAGP MGI PMID:12972605 NCBI chr18:36,413,614...36,434,575
Ensembl chr18:36,414,150...36,425,588
JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:19502490 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 IAGP MGI PMID:20011520 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor I IAGP MGI PMID:20147383 NCBI chr 4:47,353,258...47,414,926
Ensembl chr 4:47,353,222...47,414,931
JBrowse link
abnormal bronchiole morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Cdk10 cyclin dependent kinase 10 IAGP MGI PMID:28886341 NCBI chr 8:123,951,580...123,958,995
Ensembl chr 8:123,951,581...123,958,989
JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A IAGP MGI PMID:9925645 NCBI chr17:29,309,953...29,319,696
Ensembl chr17:29,309,950...29,319,701
JBrowse link
G Cdkn1c cyclin dependent kinase inhibitor 1C IAGP MGI PMID:9925645 NCBI chr 7:143,012,076...143,014,735
Ensembl chr 7:143,012,076...143,014,787
JBrowse link
G Fbn1 fibrillin 1 IAGP MGI PMID:6971670 NCBI chr 2:125,142,514...125,348,417
Ensembl chr 2:125,142,514...125,349,913
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 IAGP MGI PMID:11274405 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079
JBrowse link
G Fstl1 follistatin-like 1 IAGP MGI PMID:21482757 PMID:21826198 NCBI chr16:37,597,417...37,656,878
Ensembl chr16:37,597,235...37,656,876
JBrowse link
G Gata1 GATA binding protein 1 IAGP MGI PMID:15375268 NCBI chr  X:7,825,504...7,842,844
Ensembl chr  X:7,825,499...7,844,310
JBrowse link
G Hoxa5 homeobox A5 IAGP MGI PMID:9441679 NCBI chr 6:52,178,768...52,181,437
Ensembl chr 6:52,178,734...52,181,567
JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog IAGP MGI PMID:18493606 PMID:19151761 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965
JBrowse link
G Lpo lactoperoxidase IAGP MGI PMID:34127712 NCBI chr11:87,697,254...87,716,750
Ensembl chr11:87,697,254...87,719,115
JBrowse link
G Mir155 microRNA 155 IAGP MGI PMID:17463290 NCBI chr16:84,511,028...84,511,092
Ensembl chr16:84,511,028...84,511,092
JBrowse link
G Mmp14 matrix metallopeptidase 14 (membrane-inserted) IAGP MGI PMID:15572153 NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821
JBrowse link
G Pten phosphatase and tensin homolog IAGP MGI PMID:18493606 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560
JBrowse link
G Rb1 RB transcriptional corepressor 1 IAGP MGI PMID:19151761 NCBI chr14:73,430,298...73,563,446
Ensembl chr14:73,421,113...73,563,262
JBrowse link
G Rbl2 RB transcriptional corepressor like 2 IAGP MGI PMID:19151761 NCBI chr 8:91,796,685...91,850,472
Ensembl chr 8:91,796,685...91,850,472
JBrowse link
G Robo1 roundabout guidance receptor 1 IAGP MGI PMID:11734623 NCBI chr16:71,824,406...72,844,379
Ensembl chr16:72,105,194...72,842,983
JBrowse link
G Samd1 sterile alpha motif domain containing 1 IAGP MGI PMID:36810619 NCBI chr 8:84,724,145...84,727,044
Ensembl chr 8:84,724,130...84,727,038
JBrowse link
G Timp3 tissue inhibitor of metalloproteinase 3 IAGP MGI PMID:11560951 NCBI chr10:86,136,276...86,185,369
Ensembl chr10:86,136,236...86,185,370
JBrowse link
G Tk1 thymidine kinase 1 IAGP MGI PMID:12559842 NCBI chr11:117,706,345...117,716,913
Ensembl chr11:117,706,352...117,716,918
JBrowse link
abnormal bronchus epithelium morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adamtsl2 ADAMTS-like 2 IAGP MGI PMID:25762570 NCBI chr 2:26,969,348...26,998,993
Ensembl chr 2:26,969,391...26,998,993
JBrowse link
G Ank3 ankyrin 3, epithelial IAGP MGI PMID:23530049 NCBI chr10:69,234,608...69,863,266
Ensembl chr10:69,234,603...69,863,268
JBrowse link
G Hgsnat heparan-alpha-glucosaminide N-acetyltransferase IAGP MGI PMID:27491071 NCBI chr 8:26,432,495...26,466,704
Ensembl chr 8:26,434,481...26,466,781
JBrowse link
G Hoxa5 homeobox A5 IAGP MGI PMID:9441679 NCBI chr 6:52,178,768...52,181,437
Ensembl chr 6:52,178,734...52,181,567
JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog IAGP MGI PMID:17369402 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965
JBrowse link
G Nkx2-1 NK2 homeobox 1 IAGP MGI PMID:8557195 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693
JBrowse link
G Nkx2-9 NK2 homeobox 9 IAGP MGI PMID:17079460 NCBI chr12:56,658,174...56,660,354
Ensembl chr12:56,658,174...56,660,069
JBrowse link
G Pam peptidylglycine alpha-amidating monooxygenase IAGP MGI PMID:16225857 NCBI chr 1:97,748,816...98,023,578
Ensembl chr 1:97,722,839...98,023,371
JBrowse link
G Rab27a RAB27A, member RAS oncogene family IAGP MGI PMID:21160031 NCBI chr 9:72,952,092...73,004,905
Ensembl chr 9:72,952,136...73,004,911
JBrowse link
G Rab27b RAB27B, member RAS oncogene family IAGP MGI PMID:21160031 NCBI chr18:70,112,202...70,274,704
Ensembl chr18:70,112,202...70,274,676
JBrowse link
G Sftpc surfactant associated protein C IAGP MGI PMID:12519727 NCBI chr14:70,758,381...70,761,521
Ensembl chr14:70,758,389...70,761,521
JBrowse link
abnormal bronchus morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Acvr2b activin receptor IIB IAGP MGI PMID:9242489 NCBI chr 9:119,231,081...119,271,214
Ensembl chr 9:119,231,184...119,264,061
JBrowse link
G Cdkn1a cyclin dependent kinase inhibitor 1A IAGP MGI PMID:9925645 NCBI chr17:29,309,953...29,319,696
Ensembl chr17:29,309,950...29,319,701
JBrowse link
G Cdkn1c cyclin dependent kinase inhibitor 1C IAGP MGI PMID:9925645 NCBI chr 7:143,012,076...143,014,735
Ensembl chr 7:143,012,076...143,014,787
JBrowse link
G Cftr cystic fibrosis transmembrane conductance regulator IAGP MGI PMID:9399953 NCBI chr 6:18,170,686...18,322,769
Ensembl chr 6:18,170,686...18,322,767
JBrowse link
G Egfr epidermal growth factor receptor IAGP MGI PMID:7630400 PMID:9205141 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158
JBrowse link
G Fgf23 fibroblast growth factor 23 IAGP MGI PMID:17123805 NCBI chr 6:127,049,865...127,059,257
Ensembl chr 6:127,049,865...127,058,371
JBrowse link
G Il4ra interleukin 4 receptor, alpha IAGP MGI PMID:19770271 NCBI chr 7:125,151,443...125,178,646
Ensembl chr 7:125,151,292...125,178,646
JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog IAGP MGI PMID:17369402 PMID:18493606 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965
JBrowse link
G Lamc1 laminin, gamma 1 IAGP MGI PMID:12015298 NCBI chr 1:153,094,668...153,208,532
Ensembl chr 1:153,094,668...153,208,532
JBrowse link
G Lefty1 left right determination factor 1 IAGP MGI PMID:9708731 NCBI chr 1:180,762,587...180,765,966
Ensembl chr 1:180,762,587...180,765,965
JBrowse link
G Med1 mediator complex subunit 1 IAGP MGI PMID:10882104 NCBI chr11:98,042,980...98,084,121
Ensembl chr11:98,042,980...98,084,119
JBrowse link
G Meox2 mesenchyme homeobox 2 IAGP MGI PMID:17369402 NCBI chr12:37,158,539...37,229,533
Ensembl chr12:37,158,539...37,229,533
JBrowse link
G Mtap methylthioadenosine phosphorylase IAGP MGI PMID:17534888 NCBI chr 4:89,055,607...89,099,327
Ensembl chr 4:89,055,359...89,099,318
JBrowse link
G Nkx2-1 NK2 homeobox 1 IAGP MGI PMID:8557195 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693
JBrowse link
G Notum notum palmitoleoyl-protein carboxylesterase IAGP MGI PMID:29428562 NCBI chr11:120,544,614...120,552,019
Ensembl chr11:120,544,614...120,552,001
JBrowse link
G Pten phosphatase and tensin homolog IAGP MGI PMID:18493606 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560
JBrowse link
G Robo1 roundabout guidance receptor 1 IAGP MGI PMID:11734623 NCBI chr16:71,824,406...72,844,379
Ensembl chr16:72,105,194...72,842,983
JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:15305287 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Sox11 SRY (sex determining region Y)-box 11 IAGP MGI PMID:15254231 NCBI chr12:27,384,267...27,392,717
Ensembl chr12:27,384,263...27,392,573
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II IAGP MGI PMID:18990706 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428
JBrowse link
G Traf4 TNF receptor associated factor 4 IAGP MGI PMID:11943846 NCBI chr11:78,049,249...78,056,405
Ensembl chr11:78,049,325...78,056,415
JBrowse link
G Twist2 twist basic helix-loop-helix transcription factor 2 IAGP MGI PMID:18990706 NCBI chr 1:91,729,183...91,775,756
Ensembl chr 1:91,729,183...91,775,750
JBrowse link
abnormal club cell morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Calca calcitonin/calcitonin-related polypeptide, alpha IAGP MGI PMID:23047698 NCBI chr 7:114,225,223...114,236,145
Ensembl chr 7:114,230,713...114,235,592
JBrowse link
G Cby1 chibby family member 1, beta catenin antagonist IAGP MGI PMID:21049041 NCBI chr15:79,543,437...79,551,861
Ensembl chr15:79,543,400...79,551,861
JBrowse link
G Crb3 crumbs family member 3 IAGP MGI PMID:24164893 NCBI chr17:57,368,583...57,372,920
Ensembl chr17:57,366,105...57,372,918
JBrowse link
G Crh corticotropin releasing hormone IAGP MGI PMID:9922208 NCBI chr 3:19,747,565...19,749,560
Ensembl chr 3:19,747,565...19,749,560
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:23047698 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Hikeshi heat shock protein nuclear import factor IAGP MGI PMID:16157679 NCBI chr 7:89,567,893...89,590,446
Ensembl chr 7:89,566,737...89,590,412
JBrowse link
G Keap1 kelch-like ECH-associated protein 1 IAGP MGI PMID:19520915 NCBI chr 9:21,141,026...21,150,628
Ensembl chr 9:21,141,026...21,150,657
JBrowse link
G Mmp14 matrix metallopeptidase 14 (membrane-inserted) IAGP MGI PMID:15739229 NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821
JBrowse link
G Rab27a RAB27A, member RAS oncogene family IAGP MGI PMID:21160031 NCBI chr 9:72,952,092...73,004,905
Ensembl chr 9:72,952,136...73,004,911
JBrowse link
G Rab27b RAB27B, member RAS oncogene family IAGP MGI PMID:21160031 NCBI chr18:70,112,202...70,274,704
Ensembl chr18:70,112,202...70,274,676
JBrowse link
abnormal left major bronchus morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rara retinoic acid receptor, alpha IAGP MGI PMID:7607068 NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768
JBrowse link
G Rarb retinoic acid receptor, beta IAGP MGI PMID:7607068 NCBI chr14:5,387,365...6,038,924
Ensembl chr14:5,650,540...6,038,924
JBrowse link
abnormal right major bronchus morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rara retinoic acid receptor, alpha IAGP MGI PMID:7607068 NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768
JBrowse link
G Rarb retinoic acid receptor, beta IAGP MGI PMID:7607068 NCBI chr14:5,387,365...6,038,924
Ensembl chr14:5,650,540...6,038,924
JBrowse link
abnormal terminal bronchiole morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Egfr epidermal growth factor receptor IAGP MGI PMID:9205141 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158
JBrowse link
G Fbln5 fibulin 5 IAGP MGI PMID:11805834 PMID:11805835 NCBI chr12:101,712,820...101,785,541
Ensembl chr12:101,712,824...101,785,314
JBrowse link
G Mmp14 matrix metallopeptidase 14 (membrane-inserted) IAGP MGI PMID:15739229 NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821
JBrowse link
absent club cells term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Pofut1 protein O-fucosyltransferase 1 IAGP MGI PMID:19502490 NCBI chr 2:153,083,435...153,114,862
Ensembl chr 2:153,083,453...153,112,167
JBrowse link
G Rbpj recombination signal binding protein for immunoglobulin kappa J region IAGP MGI PMID:19502490 NCBI chr 5:53,713,121...53,814,787
Ensembl chr 5:53,623,494...53,814,704
JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:19502490 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Sox2 SRY (sex determining region Y)-box 2 IAGP MGI PMID:20011520 NCBI chr 3:34,704,144...34,706,610
Ensembl chr 3:34,704,554...34,706,610
JBrowse link
G Wfdc2 WAP four-disulfide core domain 2 IAGP MGI PMID:31562139 NCBI chr 2:164,404,635...164,410,430
Ensembl chr 2:164,404,333...164,410,430
JBrowse link
bronchial epithelial hyperplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Errfi1 ERBB receptor feedback inhibitor 1 IAGP MGI PMID:19710174 NCBI chr 4:150,938,253...150,953,346
Ensembl chr 4:150,938,376...150,953,349
JBrowse link
G Gpr4 G protein-coupled receptor 4 IAGP MGI PMID:17145776 NCBI chr 7:18,946,463...18,958,101
Ensembl chr 7:18,946,463...18,958,099
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:20548776 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog IAGP MGI PMID:27032374 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965
JBrowse link
G Krt19 keratin 19 IAGP MGI PMID:27032374 NCBI chr11:100,031,636...100,036,752
Ensembl chr11:100,031,636...100,039,491
JBrowse link
G Nkx2-9 NK2 homeobox 9 IAGP MGI PMID:17079460 NCBI chr12:56,658,174...56,660,354
Ensembl chr12:56,658,174...56,660,069
JBrowse link
G Pten phosphatase and tensin homolog IAGP MGI PMID:17921358 PMID:27032374 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560
JBrowse link
G Rb1 RB transcriptional corepressor 1 IAGP MGI PMID:7951317 NCBI chr14:73,430,298...73,563,446
Ensembl chr14:73,421,113...73,563,262
JBrowse link
G Robo1 roundabout guidance receptor 1 IAGP MGI PMID:11734623 NCBI chr16:71,824,406...72,844,379
Ensembl chr16:72,105,194...72,842,983
JBrowse link
G Scgb1a1 secretoglobin, family 1A, member 1 IAGP MGI PMID:20548776 NCBI chr19:9,061,006...9,065,320
Ensembl chr19:9,061,000...9,065,322
JBrowse link
G Thbs1 thrombospondin 1 IAGP MGI PMID:9657149 NCBI chr 2:117,942,357...117,957,614
Ensembl chr 2:117,942,357...117,957,614
JBrowse link
G Trp53 transformation related protein 53 IAGP MGI PMID:7951317 NCBI chr11:69,471,174...69,482,699
Ensembl chr11:69,471,185...69,482,699
JBrowse link
bronchiolar epithelial hyperplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Errfi1 ERBB receptor feedback inhibitor 1 IAGP MGI PMID:19710174 NCBI chr 4:150,938,253...150,953,346
Ensembl chr 4:150,938,376...150,953,349
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:20548776 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog IAGP MGI PMID:19151761 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965
JBrowse link
G Pten phosphatase and tensin homolog IAGP MGI PMID:17909629 PMID:17921358 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560
JBrowse link
decreased club cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Foxp1 forkhead box P1 IAGP MGI PMID:22675208 NCBI chr 6:98,902,303...99,510,587
Ensembl chr 6:98,902,299...99,499,682
JBrowse link
G Foxp4 forkhead box P4 IAGP MGI PMID:22675208 NCBI chr17:48,178,058...48,235,401
Ensembl chr17:48,178,058...48,235,570
JBrowse link
G Hes1 hes family bHLH transcription factor 1 IAGP MGI PMID:10952889 NCBI chr16:29,883,259...29,886,614
Ensembl chr16:29,883,202...29,886,614
JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:22675208 PMID:26329601 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor I IAGP MGI PMID:20147383 NCBI chr 4:47,353,258...47,414,926
Ensembl chr 4:47,353,222...47,414,931
JBrowse link
G Yy1 YY1 transcription factor IAGP MGI PMID:26329601 NCBI chr12:108,758,841...108,786,074
Ensembl chr12:108,758,899...108,786,074
JBrowse link
dilated respiratory conducting tube term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adam17 a disintegrin and metallopeptidase domain 17 IAGP MGI PMID:11254358 NCBI chr12:21,373,510...21,423,633
Ensembl chr12:21,373,510...21,423,633
JBrowse link
G Atp7a ATPase, Cu++ transporting, alpha polypeptide IAGP MGI PMID:937819 NCBI chr  X:105,070,830...105,171,766
Ensembl chr  X:105,070,882...105,168,532
JBrowse link
G Egfr epidermal growth factor receptor IAGP MGI PMID:9205141 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158
JBrowse link
G Foxa2 forkhead box A2 IAGP MGI PMID:14757645 NCBI chr 2:147,884,797...147,888,889
Ensembl chr 2:147,884,797...147,888,889
JBrowse link
G Foxp1 forkhead box P1 IAGP MGI PMID:17428829 NCBI chr 6:98,902,303...99,510,587
Ensembl chr 6:98,902,299...99,499,682
JBrowse link
G Foxp2 forkhead box P2 IAGP MGI PMID:17428829 NCBI chr 6:14,901,348...15,441,976
Ensembl chr 6:14,901,348...15,441,976
JBrowse link
G Fut8 fucosyltransferase 8 IAGP MGI PMID:16236725 NCBI chr12:77,284,878...77,522,770
Ensembl chr12:77,284,899...77,523,112
JBrowse link
G Gata4 GATA binding protein 4 IAGP MGI PMID:17069789 NCBI chr14:63,436,363...63,509,161
Ensembl chr14:63,436,371...63,509,141
JBrowse link
G Git1 GIT ArfGAP 1 IAGP MGI PMID:19273721 NCBI chr11:77,384,114...77,398,600
Ensembl chr11:77,384,388...77,398,612
JBrowse link
G Itga8 integrin alpha 8 IAGP MGI PMID:19769957 NCBI chr 2:12,111,443...12,306,755
Ensembl chr 2:12,111,443...12,306,733
JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog IAGP MGI PMID:17369402 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965
JBrowse link
G Lox lysyl oxidase IAGP MGI PMID:16192629 NCBI chr18:52,649,132...52,662,939
Ensembl chr18:52,649,139...52,662,939
JBrowse link
G Loxl1 lysyl oxidase-like 1 IAGP MGI PMID:14745449 NCBI chr 9:58,195,006...58,220,495
Ensembl chr 9:58,195,021...58,220,469
JBrowse link
G Meox2 mesenchyme homeobox 2 IAGP MGI PMID:17369402 NCBI chr12:37,158,539...37,229,533
Ensembl chr12:37,158,539...37,229,533
JBrowse link
G Mmp14 matrix metallopeptidase 14 (membrane-inserted) IAGP MGI PMID:15739229 NCBI chr14:54,669,055...54,679,913
Ensembl chr14:54,669,069...54,682,821
JBrowse link
G Msn moesin IAGP MGI PMID:18658275 NCBI chr  X:95,139,651...95,212,159
Ensembl chr  X:95,139,648...95,212,158
JBrowse link
G Nkx2-1 NK2 homeobox 1 IAGP MGI PMID:12829717 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693
JBrowse link
G Npas3 neuronal PAS domain protein 3 IAGP MGI PMID:19581591 NCBI chr12:53,294,874...54,118,956
Ensembl chr12:53,294,940...54,118,958
JBrowse link
G Rab38 RAB38, member RAS oncogene family IAGP MGI PMID:18832574 NCBI chr 7:88,079,481...88,140,780
Ensembl chr 7:88,079,481...88,140,780
JBrowse link
G Tcf21 transcription factor 21 IAGP MGI PMID:10572052 NCBI chr10:22,693,162...22,696,042
Ensembl chr10:22,693,180...22,696,073
JBrowse link
G Tgfb2 transforming growth factor, beta 2 IAGP MGI PMID:9217007 NCBI chr 1:186,354,984...186,441,504
Ensembl chr 1:186,354,989...186,438,186
JBrowse link
G Tgfb3 transforming growth factor, beta 3 IAGP MGI PMID:7493022 NCBI chr12:86,103,517...86,125,815
Ensembl chr12:86,103,519...86,125,815
JBrowse link
G Tgfbr1 transforming growth factor, beta receptor I IAGP MGI PMID:20147383 NCBI chr 4:47,353,258...47,414,926
Ensembl chr 4:47,353,222...47,414,931
JBrowse link
G Tgfbr2 transforming growth factor, beta receptor II IAGP MGI PMID:18990706 NCBI chr 9:115,916,763...116,004,431
Ensembl chr 9:115,913,361...116,004,428
JBrowse link
G Twist2 twist basic helix-loop-helix transcription factor 2 IAGP MGI PMID:18990706 NCBI chr 1:91,729,183...91,775,756
Ensembl chr 1:91,729,183...91,775,750
JBrowse link
dilated terminal bronchiole tube term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 IAGP MGI PMID:20223754 NCBI chr15:85,782,959...85,918,424
Ensembl chr15:85,783,130...85,918,404
JBrowse link
G Egfr epidermal growth factor receptor IAGP MGI PMID:9205141 NCBI chr11:16,700,153...16,868,158
Ensembl chr11:16,702,203...16,868,158
JBrowse link
G Timp3 tissue inhibitor of metalloproteinase 3 IAGP MGI PMID:14499643 NCBI chr10:86,136,276...86,185,369
Ensembl chr10:86,136,236...86,185,370
JBrowse link
G Vangl2 VANGL planar cell polarity 2 IAGP MGI PMID:20223754 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011
JBrowse link
fused bronchial cartilage rings term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rara retinoic acid receptor, alpha IAGP MGI PMID:7607068 NCBI chr11:98,818,626...98,865,768
Ensembl chr11:98,818,644...98,865,768
JBrowse link
G Rarb retinoic acid receptor, beta IAGP MGI PMID:7607068 NCBI chr14:5,387,365...6,038,924
Ensembl chr14:5,650,540...6,038,924
JBrowse link
G Rarg retinoic acid receptor, gamma IAGP MGI PMID:7607068 NCBI chr15:102,143,373...102,165,891
Ensembl chr15:102,143,373...102,165,952
JBrowse link
impaired branching involved in bronchus morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Fgf10 fibroblast growth factor 10 IAGP MGI PMID:9784490 PMID:15800000 PMID:19618463 NCBI chr13:118,851,199...118,928,651
Ensembl chr13:118,806,327...118,928,651
JBrowse link
G Fgfr2 fibroblast growth factor receptor 2 IAGP MGI PMID:19618463 NCBI chr 7:129,764,181...129,868,538
Ensembl chr 7:129,764,181...132,725,079
JBrowse link
G Gt(ROSA)26Sor gene trap ROSA 26, Philippe Soriano IAGP MGI PMID:19618463 NCBI chr 6:113,044,389...113,054,205
Ensembl chr 6:113,043,843...113,054,294
JBrowse link
G Hoxa5 homeobox A5 IAGP MGI PMID:9441679 NCBI chr 6:52,178,768...52,181,437
Ensembl chr 6:52,178,734...52,181,567
JBrowse link
G Itga3 integrin alpha 3 IAGP MGI PMID:8951069 NCBI chr11:94,935,301...94,967,637
Ensembl chr11:94,935,300...94,967,627
JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog IAGP MGI PMID:17369402 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965
JBrowse link
G Meox2 mesenchyme homeobox 2 IAGP MGI PMID:17369402 NCBI chr12:37,158,539...37,229,533
Ensembl chr12:37,158,539...37,229,533
JBrowse link
G Mycn v-myc avian myelocytomatosis viral related oncogene, neuroblastoma derived IAGP MGI PMID:1459449 PMID:8287798 PMID:8404543 NCBI chr12:12,986,094...12,991,837
Ensembl chr12:12,986,094...12,991,915
JBrowse link
G Nkx2-1 NK2 homeobox 1 IAGP MGI PMID:8557195 PMID:10208743 NCBI chr12:56,578,741...56,583,570
Ensembl chr12:56,578,743...56,583,693
JBrowse link
G Shh sonic hedgehog IAGP MGI PMID:9768363 NCBI chr 5:28,661,838...28,672,099
Ensembl chr 5:28,661,813...28,672,254
JBrowse link
G Spry2 sprouty RTK signaling antagonist 2 IAGP MGI PMID:17369402 NCBI chr14:106,129,381...106,134,559
Ensembl chr14:106,129,381...106,134,253
JBrowse link
G Tcf21 transcription factor 21 IAGP MGI PMID:10572052 NCBI chr10:22,693,162...22,696,042
Ensembl chr10:22,693,180...22,696,073
JBrowse link
G Twist2 twist basic helix-loop-helix transcription factor 2 IAGP MGI PMID:19618463 NCBI chr 1:91,729,183...91,775,756
Ensembl chr 1:91,729,183...91,775,750
JBrowse link
impaired branching involved in terminal bronchiole morphogenesis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Bag6 BCL2-associated athanogene 6 IAGP MGI PMID:16287848 NCBI chr17:35,354,132...35,366,297
Ensembl chr17:35,354,154...35,366,298
JBrowse link
G Celsr1 cadherin, EGF LAG seven-pass G-type receptor 1 IAGP MGI PMID:20223754 NCBI chr15:85,782,959...85,918,424
Ensembl chr15:85,783,130...85,918,404
JBrowse link
G Itga3 integrin alpha 3 IAGP MGI PMID:10433923 NCBI chr11:94,935,301...94,967,637
Ensembl chr11:94,935,300...94,967,627
JBrowse link
G Itga6 integrin alpha 6 IAGP MGI PMID:10433923 NCBI chr 2:71,617,236...71,688,761
Ensembl chr 2:71,575,960...71,688,760
JBrowse link
G Kras Kirsten rat sarcoma viral oncogene homolog IAGP MGI PMID:17369402 NCBI chr 6:145,162,425...145,197,631
Ensembl chr 6:145,162,425...145,195,965
JBrowse link
G Lox lysyl oxidase IAGP MGI PMID:16192629 NCBI chr18:52,649,132...52,662,939
Ensembl chr18:52,649,139...52,662,939
JBrowse link
G Meox2 mesenchyme homeobox 2 IAGP MGI PMID:17369402 NCBI chr12:37,158,539...37,229,533
Ensembl chr12:37,158,539...37,229,533
JBrowse link
G Nfib nuclear factor I/B IAGP MGI PMID:11850179 NCBI chr 4:82,208,410...82,424,988
Ensembl chr 4:82,208,410...82,623,987
JBrowse link
G Vangl2 VANGL planar cell polarity 2 IAGP MGI PMID:20223754 NCBI chr 1:171,828,527...171,856,532
Ensembl chr 1:171,828,527...171,856,011
JBrowse link
increased club cell number term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Lipa lysosomal acid lipase A IAGP MGI PMID:14644759 NCBI chr19:34,469,716...34,504,874
Ensembl chr19:34,469,718...34,504,874
JBrowse link
G Pten phosphatase and tensin homolog IAGP MGI PMID:17921358 PMID:19574443 PMID:20147383 NCBI chr19:32,734,977...32,803,560
Ensembl chr19:32,734,897...32,803,560
JBrowse link
G Thbs1 thrombospondin 1 IAGP MGI PMID:9657149 NCBI chr 2:117,942,357...117,957,614
Ensembl chr 2:117,942,357...117,957,614
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16657
    respiratory system phenotype 1832
      abnormal respiratory system morphology 1265
        abnormal lung morphology 823
          abnormal respiratory conducting tube morphology 111
            abnormal bronchiole morphology + 58
            abnormal bronchus morphology + 51
            dilated respiratory conducting tube 25
paths to the root