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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:abnormal tectorial membrane morphology
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Accession:MP:0003149 term browser browse the term
Definition:any structural anomaly of the overlaying membrane of cochlear duct, an extracellular matrix of the inner ear that contacts the stereocilia bundles of specialized sensory hair cells; sound induces movement of these hair cells relative to the tectorial membrane, deflects the stereocilia, and leads to fluctuations in hair cell membrane potential, transducing sound into electrical signals


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abnormal tectorial membrane morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Apoe apolipoprotein E IAGP MGI PMID:16051453 NCBI chr 7:19,430,169...19,434,326
Ensembl chr 7:19,430,034...19,433,113 		JBrowse link
G Cachd1 cache domain containing 1 IAGP MGI PMID:34388681 NCBI chr 4:100,633,870...100,861,741
Ensembl chr 4:100,633,872...100,886,417 		JBrowse link
G Col11a2 collagen, type XI, alpha 2 IAGP MGI PMID:10581026 NCBI chr17:34,257,462...34,285,659
Ensembl chr17:34,258,411...34,285,659 		JBrowse link
G Col9a1 collagen, type IX, alpha 1 IAGP MGI PMID:15802199 NCBI chr 1:24,216,670...24,291,819
Ensembl chr 1:24,216,691...24,291,765 		JBrowse link
G Duox2 dual oxidase 2 IAGP MGI PMID:17440044 NCBI chr 2:122,109,727...122,129,221
Ensembl chr 2:122,109,728...122,128,930 		JBrowse link
G Espn espin IAGP MGI PMID:6871029 NCBI chr 4:152,204,788...152,236,871
Ensembl chr 4:152,204,788...152,236,828 		JBrowse link
G Fzd3 frizzled class receptor 3 IAGP MGI PMID:16495441 NCBI chr14:65,429,890...65,499,912
Ensembl chr14:65,429,898...65,499,912 		JBrowse link
G Fzd6 frizzled class receptor 6 IAGP MGI PMID:16495441 NCBI chr15:38,869,673...38,901,587
Ensembl chr15:38,869,429...38,901,583 		JBrowse link
G Grxcr1 glutaredoxin, cysteine rich 1 IAGP MGI PMID:13336002 NCBI chr 5:68,189,122...68,323,741
Ensembl chr 5:68,189,178...68,323,741 		JBrowse link
G Hpn hepsin IAGP MGI PMID:17620368 NCBI chr 7:30,798,150...30,814,751
Ensembl chr 7:30,798,150...30,814,715 		JBrowse link
G Igf1 insulin-like growth factor 1 IAGP MGI PMID:11567053 NCBI chr10:87,694,127...87,772,909
Ensembl chr10:87,694,127...87,772,904 		JBrowse link
G Kcne1 potassium voltage-gated channel, Isk-related subfamily, member 1 IAGP MGI PMID:11003695 NCBI chr16:92,142,889...92,156,356
Ensembl chr16:92,142,870...92,156,356 		JBrowse link
G Kcnj10 potassium inwardly-rectifying channel, subfamily J, member 10 IAGP MGI PMID:12618319 NCBI chr 1:172,168,777...172,201,652
Ensembl chr 1:172,168,777...172,201,652 		JBrowse link
G Kcnq1 potassium voltage-gated channel, subfamily Q, member 1 IAGP MGI PMID:15891643 NCBI chr 7:142,660,614...142,980,787
Ensembl chr 7:142,660,099...142,980,779 		JBrowse link
G Kit KIT proto-oncogene receptor tyrosine kinase IAGP MGI PMID:5473311 NCBI chr 5:75,735,647...75,817,382
Ensembl chr 5:75,735,576...75,817,382 		JBrowse link
G Myo15a myosin XVA IEA MGI NCBI chr11:60,360,165...60,419,195
Ensembl chr11:60,360,165...60,419,195 		JBrowse link
G Oc90 otoconin 90 IAGP MGI PMID:17300776 NCBI chr15:65,747,899...65,784,260
Ensembl chr15:65,747,902...65,784,246 		JBrowse link
G Otoa otoancorin IAGP MGI PMID:23129639 NCBI chr 7:120,682,647...120,762,316
Ensembl chr 7:120,680,873...120,762,320 		JBrowse link
G Otog otogelin IAGP MGI PMID:10655058 NCBI chr 7:45,890,411...45,960,858
Ensembl chr 7:45,890,411...45,960,858 		JBrowse link
G Pkhd1l1 polycystic kidney and hepatic disease 1-like 1 IAGP MGI PMID:31444330 NCBI chr15:44,320,792...44,464,772
Ensembl chr15:44,320,890...44,464,765 		JBrowse link
G Pou1f1 POU domain, class 1, transcription factor 1 IAGP MGI PMID:19176829 NCBI chr16:65,317,398...65,331,904
Ensembl chr16:65,317,397...65,331,891 		JBrowse link
G S1pr2 sphingosine-1-phosphate receptor 2 IAGP MGI PMID:16945494 NCBI chr 9:20,877,248...20,888,089
Ensembl chr 9:20,873,657...20,888,077 		JBrowse link
G Slc12a2 solute carrier family 12, member 2 IAGP MGI PMID:10480906 PMID:11377879 NCBI chr18:58,011,505...58,079,893
Ensembl chr18:58,011,750...58,079,893 		JBrowse link
G Slc26a4 solute carrier family 26, member 4 IAGP MGI PMID:24760582 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968 		JBrowse link
G Tecta tectorin alpha IAGP MGI PMID:11087000 PMID:15995703 PMID:20142329 PMID:24363064 NCBI chr 9:42,240,918...42,312,986
Ensembl chr 9:42,240,915...42,311,225 		JBrowse link
G Tectb tectorin beta IAGP MGI PMID:17220887 NCBI chr19:55,169,158...55,184,745
Ensembl chr19:55,169,165...55,184,745 		JBrowse link
G Thra thyroid hormone receptor alpha IAGP MGI PMID:11739587 NCBI chr11:98,631,539...98,659,832
Ensembl chr11:98,631,464...98,659,832 		JBrowse link
G Thrb thyroid hormone receptor beta IAGP MGI PMID:11739587 PMID:12382103 PMID:12925699 NCBI chr14:4,429,599...4,810,538
Ensembl chr14:4,431,611...4,809,435 		JBrowse link
G Tmc1 transmembrane channel-like gene family 1 IEA MGI NCBI chr19:20,760,820...20,931,566
Ensembl chr19:20,760,822...20,931,566 		JBrowse link
G Tpo thyroid peroxidase IAGP MGI PMID:24297261 NCBI chr12:30,104,658...30,182,983
Ensembl chr12:30,104,658...30,182,623 		JBrowse link
G Tshr thyroid stimulating hormone receptor IAGP MGI PMID:10575115 NCBI chr12:91,367,767...91,507,283
Ensembl chr12:91,351,337...91,516,582 		JBrowse link
abnormal Kimura membrane morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tecta tectorin alpha IAGP MGI PMID:15995703 PMID:20142329 PMID:24363064 NCBI chr 9:42,240,918...42,312,986
Ensembl chr 9:42,240,915...42,311,225 		JBrowse link
abnormal tectorial membrane covernet morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tecta tectorin alpha IAGP MGI PMID:24363064 NCBI chr 9:42,240,918...42,312,986
Ensembl chr 9:42,240,915...42,311,225 		JBrowse link
abnormal tectorial membrane marginal band morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tecta tectorin alpha IAGP MGI PMID:15995703 PMID:24363064 NCBI chr 9:42,240,918...42,312,986
Ensembl chr 9:42,240,915...42,311,225 		JBrowse link
G Tectb tectorin beta IAGP MGI PMID:17220887 NCBI chr19:55,169,158...55,184,745
Ensembl chr19:55,169,165...55,184,745 		JBrowse link
abnormal tectorial membrane striated-sheet matrix morphology term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Ceacam16 CEA cell adhesion molecule 16 IAGP MGI PMID:25080593 NCBI chr 7:19,586,022...19,595,224
Ensembl chr 7:19,586,022...19,595,224 		JBrowse link
G Col9a1 collagen, type IX, alpha 1 IAGP MGI PMID:15802199 NCBI chr 1:24,216,670...24,291,819
Ensembl chr 1:24,216,691...24,291,765 		JBrowse link
G Hpn hepsin IAGP MGI PMID:17620368 NCBI chr 7:30,798,150...30,814,751
Ensembl chr 7:30,798,150...30,814,715 		JBrowse link
G Pou1f1 POU domain, class 1, transcription factor 1 IAGP MGI PMID:19176829 NCBI chr16:65,317,398...65,331,904
Ensembl chr16:65,317,397...65,331,891 		JBrowse link
G Tecta tectorin alpha IAGP MGI PMID:11087000 PMID:15995703 PMID:24363064 NCBI chr 9:42,240,918...42,312,986
Ensembl chr 9:42,240,915...42,311,225 		JBrowse link
G Tectb tectorin beta IAGP MGI PMID:17220887 NCBI chr19:55,169,158...55,184,745
Ensembl chr19:55,169,165...55,184,745 		JBrowse link
G Thra thyroid hormone receptor alpha IAGP MGI PMID:11739587 NCBI chr11:98,631,539...98,659,832
Ensembl chr11:98,631,464...98,659,832 		JBrowse link
G Thrb thyroid hormone receptor beta IAGP MGI PMID:11739587 NCBI chr14:4,429,599...4,810,538
Ensembl chr14:4,431,611...4,809,435 		JBrowse link
detached tectorial membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Espn espin IEA MGI NCBI chr 4:152,204,788...152,236,871
Ensembl chr 4:152,204,788...152,236,828 		JBrowse link
G Mcoln3 mucolipin 3 IEA MGI NCBI chr 3:145,799,032...145,847,563
Ensembl chr 3:145,823,205...145,847,561 		JBrowse link
G Myo6 myosin VI IAGP MGI PMID:5980120 NCBI chr 9:80,072,262...80,219,011
Ensembl chr 9:80,072,313...80,219,011 		JBrowse link
G Otoa otoancorin IAGP MGI PMID:23129639 NCBI chr 7:120,682,647...120,762,316
Ensembl chr 7:120,680,873...120,762,320 		JBrowse link
G Tecta tectorin alpha IAGP MGI PMID:11087000 PMID:15995703 PMID:20142329 NCBI chr 9:42,240,918...42,312,986
Ensembl chr 9:42,240,915...42,311,225 		JBrowse link
G Thrb thyroid hormone receptor beta IAGP MGI PMID:12382103 NCBI chr14:4,429,599...4,810,538
Ensembl chr14:4,431,611...4,809,435 		JBrowse link
G Tmie transmembrane inner ear IAGP MGI PMID:14027064 NCBI chr 9:110,694,755...110,709,141
Ensembl chr 9:110,694,779...110,709,181 		JBrowse link
enlarged tectorial membrane term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Col11a2 collagen, type XI, alpha 2 IAGP MGI PMID:10581026 NCBI chr17:34,257,462...34,285,659
Ensembl chr17:34,258,411...34,285,659 		JBrowse link
G Col9a1 collagen, type IX, alpha 1 IAGP MGI PMID:15802199 NCBI chr 1:24,216,670...24,291,819
Ensembl chr 1:24,216,691...24,291,765 		JBrowse link
G Hpn hepsin IAGP MGI PMID:17620368 NCBI chr 7:30,798,150...30,814,751
Ensembl chr 7:30,798,150...30,814,715 		JBrowse link
G Mcoln3 mucolipin 3 IEA MGI NCBI chr 3:145,799,032...145,847,563
Ensembl chr 3:145,823,205...145,847,561 		JBrowse link
G Pax8 paired box 8 IAGP MGI PMID:14981357 NCBI chr 2:24,310,563...24,365,611
Ensembl chr 2:24,310,572...24,365,611 		JBrowse link
G Slc26a4 solute carrier family 26, member 4 IAGP MGI PMID:24760582 NCBI chr12:31,569,813...31,610,054
Ensembl chr12:31,569,826...31,609,968 		JBrowse link
G Tectb tectorin beta IAGP MGI PMID:17220887 NCBI chr19:55,169,158...55,184,745
Ensembl chr19:55,169,165...55,184,745 		JBrowse link
G Thra thyroid hormone receptor alpha IAGP MGI PMID:11739587 NCBI chr11:98,631,539...98,659,832
Ensembl chr11:98,631,464...98,659,832 		JBrowse link
G Thrb thyroid hormone receptor beta IAGP MGI PMID:11739587 PMID:12382103 PMID:12925699 PMID:19244534 NCBI chr14:4,429,599...4,810,538
Ensembl chr14:4,431,611...4,809,435 		JBrowse link
Term paths to the root
Path 1
Term Annotations click to browse term
  mammalian phenotype 16532
    hearing/vestibular/ear phenotype 992
      abnormal ear morphology 558
        abnormal inner ear morphology 347
          abnormal cochlea morphology 280
            abnormal scala media morphology 267
              abnormal tectorial membrane morphology 36
                abnormal Kimura membrane morphology 1
                abnormal tectorial membrane covernet morphology 1
                abnormal tectorial membrane marginal band morphology 2
                abnormal tectorial membrane striated-sheet matrix morphology 8
                detached tectorial membrane 7
                enlarged tectorial membrane 9
Path 2
Term Annotations click to browse term
  mammalian phenotype 16532
    hearing/vestibular/ear phenotype 992
      abnormal ear morphology 558
        abnormal inner ear morphology 347
          abnormal membranous labyrinth morphology 301
            abnormal cochlear labyrinth morphology 267
              abnormal scala media morphology 267
                abnormal tectorial membrane morphology 36
                  abnormal Kimura membrane morphology 1
                  abnormal tectorial membrane covernet morphology 1
                  abnormal tectorial membrane marginal band morphology 2
                  abnormal tectorial membrane striated-sheet matrix morphology 8
                  detached tectorial membrane 7
                  enlarged tectorial membrane 9
paths to the root