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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.
Term:impaired basement membrane formation
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Accession:MP:0003044 term browser browse the term
Definition:defect in the development of the extracellular supportive tissue closely adjacent to the basal surface of the epithelium of muscle cells, fat cells and Schwann cells, which is comprised of type IV collagen, laminin, and sulfated proteoglycans and other components
Synonyms:exact_synonym: impaired basement lamina formation


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impaired basement membrane formation term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Adm adrenomedullin IAGP MGI PMID:11602502 NCBI chr 7:110,226,864...110,229,027
Ensembl chr 7:110,226,868...110,229,027 		JBrowse link
G Ctnnal1 catenin alpha like 1 IAGP MGI PMID:32258033 NCBI chr 4:56,810,935...56,865,370
Ensembl chr 4:56,810,935...56,865,188 		JBrowse link
G Fktn fukutin IAGP MGI PMID:15837576 NCBI chr 4:53,713,745...53,765,785
Ensembl chr 4:53,713,998...53,777,890 		JBrowse link
G Flrt3 fibronectin leucine rich transmembrane protein 3 IAGP MGI PMID:21350012 NCBI chr 2:140,500,118...140,513,396
Ensembl chr 2:140,492,834...140,513,389 		JBrowse link
G Hspg2 perlecan (heparan sulfate proteoglycan 2) IAGP MGI PMID:10579729 NCBI chr 4:137,196,062...137,297,941
Ensembl chr 4:137,196,080...137,297,941 		JBrowse link
G Itgb8 integrin beta 8 IAGP MGI PMID:12050137 NCBI chr12:119,121,757...119,202,891
Ensembl chr12:119,121,757...119,202,537 		JBrowse link
G Lama4 laminin, alpha 4 IAGP MGI PMID:11809810 NCBI chr10:38,841,511...38,986,184
Ensembl chr10:38,841,511...38,986,184 		JBrowse link
G Lama5 laminin, alpha 5 IAGP MGI PMID:12051813 NCBI chr 2:179,818,166...179,867,652
Ensembl chr 2:179,818,166...179,867,652 		JBrowse link
G Notch1 notch 1 IAGP MGI PMID:26563570 NCBI chr 2:26,347,914...26,393,834
Ensembl chr 2:26,347,915...26,406,675 		JBrowse link
G Notch3 notch 3 IAGP MGI PMID:26563570 NCBI chr17:32,339,794...32,385,869
Ensembl chr17:32,339,794...32,385,826 		JBrowse link
G P4ha1 procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide IAGP MGI PMID:17135260 NCBI chr10:59,159,019...59,209,126
Ensembl chr10:59,159,118...59,209,126 		JBrowse link
G Plod3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 IAGP MGI PMID:16467571 NCBI chr 5:137,015,873...137,025,500
Ensembl chr 5:137,015,873...137,025,502 		JBrowse link
G Pomgnt1 protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase IAGP MGI PMID:23454088 NCBI chr 4:116,007,700...116,017,041
Ensembl chr 4:115,981,037...116,017,046 		JBrowse link
Term paths to the root
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Term Annotations click to browse term
  mammalian phenotype 16962
    cellular phenotype 5421
      abnormal extracellular matrix morphology 148
        abnormal basement membrane morphology 50
          impaired basement membrane formation 13
paths to the root