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MAMMALIAN PHENOTYPE - ANNOTATIONS

The Mouse Adult Gross Anatomy Ontology and Mammalian Phenotype Ontology are downloaded weekly from the Mouse Genome Informatics databases at Jackson Laboratories (ftp://ftp.informatics.jax.org/pub/reports/index.html). For more information about these ontologies, see the MGI Publications Page at http://www.informatics.jax.org/mgihome/other/publications.shtml.

Term:abnormal lymph node morphology
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Accession:MP:0002339 term browser browse the term
Definition:any structural anomaly of the oval or bean shaped bodies located along the lymphatic system that consist of densely packed lymphocytes, lymph fluid and connective tissue, and is the site where acquired immune responses are launched
Synonyms:exact_synonym: abnormal lymph gland morphology;   abnormal lymph node structure;   lymph node abnormalities;   lymph node dysplasia
 alt_id: MP:0000699;   MP:0005024



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lymph node hypoplasia term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Il2rg interleukin 2 receptor subunit gamma IMP RGD PMID:29688994 RGD:13628403 NCBI chr  X:66,395,330...66,399,026
Ensembl chr  X:66,392,542...66,399,823
JBrowse link
G Il2rgem1Ang interleukin 2 receptor subunit gamma;TALEN induced mutant1, Ang IMP RGD PMID:29688994 RGD:13628403
G Rag1 recombination activating 1 IMP RGD PMID:29688994 RGD:13628403 NCBI chr 3:87,917,061...87,928,158
Ensembl chr 3:87,917,004...87,928,291
JBrowse link
G Rag1em1Ang recombination activating gene 1; zinc finger nuclease induced mutant 1, Ignacio Anegon IMP RGD PMID:29688994 RGD:13628403
small lymph nodes term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Rag1 recombination activating 1 IMP RGD PMID:23150522 RGD:7204134 NCBI chr 3:87,917,061...87,928,158
Ensembl chr 3:87,917,004...87,928,291
JBrowse link
G Rag1em1Ang recombination activating gene 1; zinc finger nuclease induced mutant 1, Ignacio Anegon IMP RGD PMID:23150522 RGD:7204134

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  mammalian phenotype 5402
    immune system phenotype 502
      abnormal immune system morphology 194
        abnormal immune system organ morphology 73
          abnormal lymph node morphology 10
            abnormal abdominal lymph node morphology + 3
            abnormal afferent lymphatic vessel morphology 0
            abnormal efferent lymphatic vessel morphology 0
            abnormal lymph node cell ratio 0
            abnormal lymph node cortex morphology + 0
            abnormal lymph node medulla morphology + 0
            abnormal lymph node number + 0
            abnormal lymph node size + 6
            abnormal lymph node trabecula morphology 0
            abnormal peripheral lymph node morphology + 1
            absent lymph nodes 0
            lymph node necrosis 0
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